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. 2015 Mar 27;10(3):e0118444. doi: 10.1371/journal.pone.0118444

Correction: Comprehensive Selection of Reference Genes for Gene Expression Normalization in Sugarcane by Real Time Quantitative RT-PCR

The PLOS ONE Staff
PMCID: PMC4376913  PMID: 25815471

In the Funding section, the grant number for the Research Funds for Distinguished Young Scientists in Fujian Provincial Department of Education grant is incorrect. Please refer to the correct Funding section here.

This work was funded by National Natural Science Foundation of China (31271782), Research Funds for Distinguished Young Scientists in Fujian Provincial Department of Education (JA13090) and Research Funds for Distinguished Young Scientists in Fujian Agriculture and Forestry University (xjq201202). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

Additionally, there is an error in the Reference section of Table 1. Please refer to the correct Table 1 here.

Table 1. Thirteen reference genes surveyed in this work with their amplification and expression characteristics in Saccharum officinarum.

gene Accession number Functions Primer F/R (5'-3') Amplicon length (nt) Tm (°C) PCR efficiencies (E %) RegressionCoefficient (R2) Mean Ct SD CV (%) Reference
25S rRNA BQ536525 25S ribosomal RNA GCAGCCAAGCGTTCATAGC CCTATTGGTGGGTGAACAATCC 108 60 113.83 0.9982 14.27 0.71 5.01 Saccharum spp.L. [32]
GAPDH CA254672 glyceraldehyde-3-phosphate dehydrogenase CACGGCCACTGGAAGCA TCCTCAGGGTTCCTGATGCC 101 60 93.24 0.9986 24.64 1.23 5.01 Saccharum spp.L. [32]
ACT * CA148161 β-actin CTGGAATGGTCAAGGCTGGT TCCTTCTGTCCCATCCCTACC 112 60 109.06 0.9988 25.03 1.06 4.23 Saccharum spp.L. [32]
TUB ** CA222437 β-tubulin CCAAGTTCTGGGAGGTGATCTG TTGTAGTAGACGTTGATGCGCTC 103 60 94.76 0.9997 26.91 1.43 5.31 Saccharum spp.L. [32]
18S rRNA SCFRRE06 18S ribosomal RNA CTACGTCCCTGCCCTTTGTACA ACACTTCACCGGACCATTCAA 65 60 97.24 0.9982 15.38 0.74 4.81 Oryza sativa [12]
UBQ CA262530.1 Ubiquitin ACCACTTCGACCGCCACTACTG CACCACCTAGCAAGGCTTTCCATTTC 69 60 102.3 0.9998 26.47 1.29 4.88 Oryza sativa [12]
eEF-1a EF581011.1 Eukaryotic elongation factor 1a TTTCACACTTGGAGTGAAGCAGAT GACTTCCTTCACAATCTCATCATAA 103 60 96.87 0.9998 24.24 1.33 5.48 Oryza sativa [12]
eIF-4α CA275432.1 Eukaryotic initiation factor 4a TTGTGCTGGATGAAGCTGATG GGAAGAAGCTGGAAGATATCATAGA 76 60 98.87 0.9876 27.98 1.24 4.42 Oryza sativa [12]
CUL CF574093.1 Cullin TGCTGAATGTGTTGAGCAGC TTGTCGCGCTCCAAGTAGTC 105 60 105.66 0.999 27.05 1.49 5.52 Zea mays [14]
CAC CA203604.1 Clathrin adaptor complex ACAACGTCAGGCAAAGCAAA AGATCAACTCCACCTCTGCG 112 60 99.5 0.9999 27.88 1.41 5.05 Brassica juncea [15]
TIPS-41 CA228782.1 Tonoplastic intrinsic protein CACCTGTTGAGGTTCCTGCT CACAGCATCACTCCCACAGT 116 60 113.56 0.9964 28.09 2.15 7.67 Brassica juncea [15>]
APRT CA089592.1 Anthranilate phosphoribosyl transferase TGACACATTCCCAACCTCAA ATCTCTCTCCCTGAGTGGCA 119 60 102.53 0.9993 27.35 1.37 5 Saccharum spp.L. [30]
PRR CA275446.1 Pseudo response regulator GCCAAATTCAGGCAGAAAAG CACCCTAGGCCTTGTTTCAG 93 60 98.13 0.9999 28.21 2.04 7.25 Saccharum spp.L. [30]

Mean Ct values and RNA concentration were used for calculating slopes and correlation coefficients (R2). According to the formula [E = (10(−1/slope)−1)×100%, qPCR efficiencies (E) were calculated based on the standard curves. Mean Ct value (mean), Standard deviation (SD) and Covariance (CV) were calculated by Microsoft Excel 2003 and the Ct values from all of the samples were used. The sequence numbers were obtained from www.ncbi.nlm.nih.gov/nucest/?term=sugarcane.

Reference


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