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Nucleic Acids Research logoLink to Nucleic Acids Research
. 2015 Jan 29;43(6):3406. doi: 10.1093/nar/gkv067

qDNAmod: a statistical model-based tool to reveal intercellular heterogeneity of DNA modification from SMRT sequencing data

Z Feng, J Li, JR Zhang, X Zhang
PMCID: PMC4381054  PMID: 25634894

Nucleic Acids Res. 2014 Dec 16;42(22):13488–99. doi: 10.1093/nar/gku1097

In this article, the authors have incorrectly designated three DNA methyltransferases in Streptococcus pneumoniae strain ST556, as shown in Table 1. The correct nomenclatures should be:

  • - M. Spn556I (MYY0859; type II R-M system recognizing TCTAGA)

  • - M. Spn556II (MYY0571; type I R-M system recognizing AAG(N)8TTYG)

  • - M. Spn556III (MYY1312; type I R-M system recognizing TGA(N)7TATC).

Table 1. Changes in nomenclature.

Old name* New name*
M. Spn556IV M. Spn556I
M. Spn556III M. Spn556II
M. Spn556V M. Spn556III

*Changes are shown in bold.

In addition, the recognition sequence of the type I system encoded by MYY570-MMY572 in Figure 3A should be AAG(N)8TTYG.


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