In the crystal of the title compound, which crystallized with two independent molecules (A and B) in the asymmetric unit, the A and B molecules are linked via pairs of N—H⋯S hydrogen bonds, forming dimers with an
(8) ring motif. The dimers are linked via pairs of C—H⋯O hydrogen bonds and C—H⋯π interactions, forming ribbons propagating along [100].
Keywords: crystal structure; dithiocarbazate; hydrazine-1-carbodithioate; 3,4-dimethoxybenzaldehyde; hydrogen bonding; C—H⋯π interactions
Abstract
The title compound, C17H18N2O2S2, synthesized via a condensation reaction between S-benzyl dithiocarbazate and 3,4-dimethoxybenzaldehyde, crystallized with two independent molecules (A and B) in the asymmetric unit. Both molecules have an L-shape but differ in the orientation of the benzyl ring with respect to the 3,4-dimethoxybenzylidine ring, this dihedral angle is 65.59 (8)° in molecule A and 73.10 (8)° in molecule B. In the crystal, the A and B molecules are linked via pairs of N—H⋯S hydrogen bonds, forming dimers with an R 2 2(8) ring motif. The dimers are linked via pairs of C—H⋯O hydrogen bonds, giving inversion dimers of dimers. These units are linked by C—H⋯π interactions, forming ribbons propagating in the [100] direction.
Chemical context
Schiff bases have been proven to possess a variety of biological activities, and this has led to extensive studies on this group of compounds with particular emphasis on those derived from dithiocarbazates. Dithiocarbazate-derived Schiff bases have generally been found to exhibit interesting cytotoxic and antimicrobial activities. One of the most investigated dithiocarbazates has been S-benzyldithiocarbazate (SBDTC) whose derivatives have shown promising biological activities (Break et al., 2013 ▸). Therefore, as part of our research which is aimed at developing anticancer and antimicrobial drugs, we have synthesized a novel Schiff base via the condensation reaction of SBDTC and 3,4-dimethoxybenzaldehyde. We report herein on the synthesis and crystal structure of the title compound.
Structural commentary
The title compound, Fig. 1 ▸, crystallized with two independent molecules (A and B) in the asymmetric unit. Both molecules have an l-shape but differ in the orientation of the benzyl ring with respect to the 3,4-dimethoxybenzylidine ring, this dihedral angle being 65.59 (8) ° in molecule A and 73.10 (8) ° in molecule B (Fig. 2 ▸).
Figure 1.
A view of the molecular structure of the two independent molecules (A and B) of the title compound, showing the atom labelling. Displacement ellipsoids are drawn at the 50% probability level. N—H⋯S hydrogen bonds are shown as dashed lines (see Table 1 ▸ for details).
Figure 2.
A view of the molecular overlay (Mercury; Macrae et al., 2008 ▸) of the two independent molecules (A blue and B red) of the title compound.
The C—N and N(H)—C bond lengths (C1—N1 and N2—C9 in A, and C21—N21 and N22—C29 in B) are 1.331 (2) and 1.282 (2) Å, respectively, in molecule A, and 1.336 (2) and 1.280 (2) Å, respectively, in molecule B. The shorter length of the C—N bond suggests the existence of a double bond which belongs to the imine group. Similarly, the shorter C—S bond length [C1—S1 = 1.681 (2) Å in A, and C21—S21 = 1.677 (2) Å in B] relative to that of [C1—S2 = 1.749 (2) Å in A, and C21—S22 = 1.749 (2) Å in B] suggests that the former possesses double-bond character, indicating that the molecule exists in its thione form in the solid state. The functional group identities proposed from these bond lengths are further supported by data obtained from the IR analysis reported below. Furthermore, the bond distances in the title compound are similar to those found for other carbodithioate-derived Schiff bases (Break et al.; 2013 ▸; Khoo et al., 2014 ▸).
Both molecules (A and B) crystallizes in the conformer in which the two aromatic rings of the compound are cis with respect to each other across the C=N bonds, while the thione sulfur atom is trans with respect to the same bond.
Supramolecular features
In the crystal, the A and B molecules are linked by pairs of N—H⋯S hydrogen bonds, forming dimers with an R22 (8) ring motif (Table 1 ▸ and Fig. 3 ▸). The dimers are linked via pairs of C—H⋯O hydrogen bonds, giving inversion dimers of dimers. These units are linked by C—H⋯π interactions, forming ribbons propagating in the [100] direction (Fig. 3 ▸ and Table 1 ▸).
Table 1. Hydrogen-bond geometry (, ).
Cg1, Cg2 and Cg4 are the centroids of the C3C8, C10C15 and C30C35 rings, respectively.
| DHA | DH | HA | D A | DHA |
|---|---|---|---|---|
| N1H2S21 | 0.92 | 2.52 | 3.418(1) | 166 |
| N21H1S1 | 0.87 | 2.55 | 3.407(1) | 168 |
| C16H163O21i | 0.97 | 2.69 | 3.560(2) | 149 |
| C17H172Cg4ii | 0.97 | 2.74 | 3.5587(18) | 143 |
| C28H281Cg1ii | 0.94 | 2.94 | 3.6082(18) | 130 |
| C36H363Cg2i | 0.97 | 2.67 | 3.5023(17) | 145 |
Symmetry codes: (i)
; (ii)
.
Figure 3.
A view approximately along the b axis of the crystal structure of the title compound. The hydrogen bonds and C—H⋯π interactions are shown as dashed lines (see Table 1 ▸ for details; for clarity only the H atoms involved in these interactions are shown).
Database survey
A search of the Cambridge Structural Database (Version 5.35, May 2014; Groom & Allen, 2014 ▸) for benzyl (E)-2-benzylidenehydrazine-1-carbodithioates gave 13 hits. One of these concerns a structure very similar to the title compound, namely benzyl (E)-2-(4-methoxybenzylidene)hydrazine-1-carbodithioate (YAHDAO; Fan et al., 2011 ▸). Here the two aromatic rings are inclined to one another by ca 85.71°, compared with 65.59 (8)° in molecule A and 73.10 (8)° in molecule B of the title compound.
Synthesis and crystallization
1.98 g (0.01 mol) of S-benzyldithiocarbazate in 30 ml of absolute ethanol was added to an equimolar quantity of 3,4-dimethoxybenzaldehyde in 10 ml of absolute ethanol, followed by the addition of 2–4 drops of concentrated H2SO4. The mixture was heated over a steam bath for 15 min and a precipitate started to form. The Schiff base which precipitated was filtered, washed with cold ethanol and dried in vacuo over silica gel, giving a white yellowish product. Yellow crystals of the title compound, suitable for X-ray analysis, were obtained by slow evaporation of a solution in DMSO over a period of three weeks (yield 60%; m.p. 438–439 K). IR (KBr, cm−1): 3360, 3122, 1602, 1069, 1023, 950, 788, 695. LCMS (ESI+): 347.1 [M+H]+.
Refinement
Crystal data, data collection and structure refinement details are summarized in Table 2 ▸. The H atoms were all located in a difference Fourier map, but those attached to carbon atoms were repositioned geometrically. The H atoms were initially refined with soft restraints on the bond lengths and angles to regularize their geometry (C—H in the range 0.93–0.98 Å, N—H in the range 0.86–0.89 Å), with U iso(H) = 1.5U eq(C) for methyl H atoms and = 1.2U eq(C) for other H atoms.
Table 2. Experimental details.
| Crystal data | |
| Chemical formula | C17H18N2O2S2 |
| M r | 346.45 |
| Crystal system, space group | Triclinic, P
|
| Temperature (K) | 100 |
| a, b, c () | 9.6432(5), 10.796(1), 16.1673(10) |
| , , () | 90.899(6), 97.203(5), 91.200(6) |
| V (3) | 1669.2(2) |
| Z | 4 |
| Radiation type | Cu K |
| (mm1) | 2.98 |
| Crystal size (mm) | 0.15 0.06 0.04 |
| Data collection | |
| Diffractometer | Oxford Diffraction Gemini |
| Absorption correction | Multi-scan (CrysAlis RED; Oxford Diffraction, 2002 ▸) |
| T min, T max | 0.74, 0.89 |
| No. of measured, independent and observed [I > 2(I)] reflections | 23678, 6592, 5514 |
| R int | 0.028 |
| (sin /)max (1) | 0.622 |
| Refinement | |
| R[F 2 > 2(F 2)], wR(F 2), S | 0.037, 0.106, 0.99 |
| No. of reflections | 6567 |
| No. of parameters | 415 |
| H-atom treatment | H-atom parameters constrained |
| max, min (e 3) | 0.44, 0.33 |
Supplementary Material
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S205698901500095X/su5044sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S205698901500095X/su5044Isup2.hkl
Supporting information file. DOI: 10.1107/S205698901500095X/su5044Isup3.cml
CCDC reference: 1043887
Additional supporting information: crystallographic information; 3D view; checkCIF report
Acknowledgments
The authors thank the Ministry of Higher Education Malaysia (MOHE) under FRGS (F0010.54.02) for providing a grant for this study.
supplementary crystallographic information
Crystal data
| C17H18N2O2S2 | Z = 4 |
| Mr = 346.45 | F(000) = 728 |
| Triclinic, P1 | Dx = 1.379 Mg m−3 |
| Hall symbol: -P 1 | Cu Kα radiation, λ = 1.54180 Å |
| a = 9.6432 (5) Å | Cell parameters from 8676 reflections |
| b = 10.796 (1) Å | θ = 4–73° |
| c = 16.1673 (10) Å | µ = 2.98 mm−1 |
| α = 90.899 (6)° | T = 100 K |
| β = 97.203 (5)° | Plate, yellow |
| γ = 91.200 (6)° | 0.15 × 0.06 × 0.04 mm |
| V = 1669.2 (2) Å3 |
Data collection
| Oxford Diffraction Gemini diffractometer | 5514 reflections with I > 2σ(I) |
| Graphite monochromator | Rint = 0.028 |
| ω scans | θmax = 73.4°, θmin = 4.1° |
| Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2002) | h = −11→11 |
| Tmin = 0.74, Tmax = 0.89 | k = −13→11 |
| 23678 measured reflections | l = −20→20 |
| 6592 independent reflections |
Refinement
| Refinement on F2 | Primary atom site location: other |
| Least-squares matrix: full | Hydrogen site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.037 | H-atom parameters constrained |
| wR(F2) = 0.106 | Method = Modified Sheldrick w = 1/[σ2(F2) + ( 0.07P)2 + 0.48P] , where P = (max(Fo2,0) + 2Fc2)/3 |
| S = 0.99 | (Δ/σ)max = 0.001 |
| 6567 reflections | Δρmax = 0.44 e Å−3 |
| 415 parameters | Δρmin = −0.33 e Å−3 |
| 0 restraints |
Special details
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems open-flow nitrogen cryostat (Cosier & Glazer, 1986) with a nominal stability of 0.1K. Cosier, J. & Glazer, A.M., 1986. J. Appl. Cryst. 105-107. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| S1 | 0.67401 (4) | 0.61670 (4) | 0.39922 (2) | 0.0170 | |
| C1 | 0.77157 (15) | 0.52035 (14) | 0.34926 (9) | 0.0150 | |
| S2 | 0.78189 (4) | 0.51826 (4) | 0.24198 (2) | 0.0182 | |
| C2 | 0.66277 (16) | 0.64058 (15) | 0.20558 (10) | 0.0187 | |
| C3 | 0.68192 (15) | 0.66561 (15) | 0.11569 (9) | 0.0174 | |
| C8 | 0.65456 (17) | 0.57319 (16) | 0.05415 (10) | 0.0215 | |
| C7 | 0.67331 (17) | 0.59709 (17) | −0.02786 (10) | 0.0245 | |
| C6 | 0.71768 (17) | 0.71377 (18) | −0.04941 (10) | 0.0243 | |
| C5 | 0.74303 (17) | 0.80681 (17) | 0.01141 (10) | 0.0239 | |
| C4 | 0.72699 (16) | 0.78255 (16) | 0.09388 (10) | 0.0199 | |
| N1 | 0.85201 (13) | 0.43802 (12) | 0.39143 (8) | 0.0163 | |
| N2 | 0.92928 (13) | 0.35596 (12) | 0.35025 (8) | 0.0171 | |
| C9 | 1.01861 (16) | 0.29639 (15) | 0.39886 (10) | 0.0171 | |
| C10 | 1.10446 (16) | 0.20035 (14) | 0.36811 (9) | 0.0156 | |
| C15 | 1.20578 (16) | 0.14725 (15) | 0.42490 (10) | 0.0167 | |
| C14 | 1.28967 (15) | 0.05382 (15) | 0.39928 (9) | 0.0159 | |
| C13 | 1.27152 (15) | 0.01212 (14) | 0.31724 (10) | 0.0154 | |
| O2 | 1.34580 (11) | −0.07889 (11) | 0.28523 (7) | 0.0187 | |
| C17 | 1.44520 (17) | −0.14133 (16) | 0.34241 (10) | 0.0204 | |
| C12 | 1.16634 (16) | 0.06392 (15) | 0.25933 (9) | 0.0168 | |
| C11 | 1.08539 (16) | 0.15789 (15) | 0.28466 (10) | 0.0169 | |
| O1 | 1.15407 (12) | 0.01059 (11) | 0.18189 (7) | 0.0235 | |
| C16 | 1.03032 (18) | 0.03484 (18) | 0.12691 (10) | 0.0242 | |
| S21 | 0.84603 (4) | 0.37456 (4) | 0.59742 (2) | 0.0167 | |
| C21 | 0.74525 (15) | 0.46870 (14) | 0.64640 (9) | 0.0153 | |
| S22 | 0.73586 (4) | 0.47065 (4) | 0.75377 (2) | 0.0186 | |
| C22 | 0.84857 (16) | 0.34265 (15) | 0.78893 (10) | 0.0186 | |
| C23 | 0.82688 (16) | 0.31752 (15) | 0.87789 (10) | 0.0177 | |
| C28 | 0.92759 (17) | 0.35307 (16) | 0.94417 (10) | 0.0218 | |
| C27 | 0.90523 (18) | 0.32945 (16) | 1.02578 (10) | 0.0245 | |
| C26 | 0.78224 (19) | 0.27209 (16) | 1.04222 (10) | 0.0241 | |
| C25 | 0.68103 (18) | 0.23642 (17) | 0.97647 (10) | 0.0243 | |
| C24 | 0.70366 (17) | 0.25821 (16) | 0.89488 (10) | 0.0219 | |
| N21 | 0.66212 (13) | 0.54892 (12) | 0.60336 (8) | 0.0167 | |
| N22 | 0.58326 (14) | 0.63039 (12) | 0.64363 (8) | 0.0174 | |
| C29 | 0.49371 (16) | 0.68920 (15) | 0.59483 (10) | 0.0165 | |
| C30 | 0.40710 (15) | 0.78438 (14) | 0.62621 (10) | 0.0156 | |
| C31 | 0.30524 (16) | 0.83952 (15) | 0.57104 (9) | 0.0160 | |
| C32 | 0.22248 (15) | 0.93261 (15) | 0.59875 (9) | 0.0161 | |
| C33 | 0.24252 (15) | 0.97166 (14) | 0.68106 (9) | 0.0154 | |
| O21 | 0.17151 (11) | 1.06326 (10) | 0.71518 (7) | 0.0186 | |
| C36 | 0.07068 (16) | 1.12784 (15) | 0.65980 (10) | 0.0198 | |
| C34 | 0.34780 (16) | 0.91696 (15) | 0.73749 (9) | 0.0165 | |
| C35 | 0.42769 (16) | 0.82408 (15) | 0.71021 (9) | 0.0169 | |
| O22 | 0.36178 (12) | 0.96604 (11) | 0.81611 (7) | 0.0226 | |
| C37 | 0.48390 (17) | 0.93340 (17) | 0.86989 (10) | 0.0229 | |
| H21 | 0.6844 | 0.7164 | 0.2396 | 0.0224* | |
| H22 | 0.5671 | 0.6108 | 0.2095 | 0.0226* | |
| H81 | 0.6251 | 0.4926 | 0.0696 | 0.0260* | |
| H71 | 0.6559 | 0.5360 | −0.0684 | 0.0289* | |
| H61 | 0.7301 | 0.7280 | −0.1055 | 0.0281* | |
| H51 | 0.7718 | 0.8866 | −0.0041 | 0.0283* | |
| H41 | 0.7470 | 0.8439 | 0.1359 | 0.0224* | |
| H91 | 1.0307 | 0.3132 | 0.4569 | 0.0196* | |
| H151 | 1.2192 | 0.1755 | 0.4814 | 0.0193* | |
| H141 | 1.3600 | 0.0204 | 0.4383 | 0.0195* | |
| H171 | 1.4887 | −0.2006 | 0.3096 | 0.0295* | |
| H172 | 1.5153 | −0.0849 | 0.3703 | 0.0296* | |
| H173 | 1.3961 | −0.1841 | 0.3835 | 0.0292* | |
| H111 | 1.0173 | 0.1922 | 0.2457 | 0.0203* | |
| H161 | 1.0275 | −0.0232 | 0.0825 | 0.0339* | |
| H162 | 1.0336 | 0.1188 | 0.1071 | 0.0348* | |
| H163 | 0.9479 | 0.0253 | 0.1552 | 0.0344* | |
| H221 | 0.9453 | 0.3651 | 0.7838 | 0.0209* | |
| H222 | 0.8212 | 0.2696 | 0.7549 | 0.0213* | |
| H281 | 1.0106 | 0.3923 | 0.9334 | 0.0253* | |
| H271 | 0.9755 | 0.3524 | 1.0704 | 0.0279* | |
| H261 | 0.7688 | 0.2572 | 1.0983 | 0.0275* | |
| H251 | 0.5958 | 0.1972 | 0.9872 | 0.0282* | |
| H241 | 0.6357 | 0.2334 | 0.8499 | 0.0246* | |
| H291 | 0.4816 | 0.6724 | 0.5376 | 0.0190* | |
| H311 | 0.2919 | 0.8124 | 0.5145 | 0.0188* | |
| H321 | 0.1533 | 0.9669 | 0.5598 | 0.0183* | |
| H361 | 0.0297 | 1.1869 | 0.6942 | 0.0279* | |
| H362 | 0.1185 | 1.1706 | 0.6193 | 0.0275* | |
| H363 | 0.0006 | 1.0703 | 0.6330 | 0.0275* | |
| H351 | 0.4958 | 0.7869 | 0.7466 | 0.0208* | |
| H371 | 0.4800 | 0.9831 | 0.9202 | 0.0331* | |
| H372 | 0.5668 | 0.9527 | 0.8439 | 0.0323* | |
| H373 | 0.4801 | 0.8448 | 0.8807 | 0.0322* | |
| H1 | 0.6713 | 0.5556 | 0.5505 | 0.0500* | |
| H2 | 0.8546 | 0.4361 | 0.4487 | 0.0500* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| S1 | 0.01948 (19) | 0.0154 (2) | 0.01721 (19) | 0.00548 (15) | 0.00564 (14) | 0.00046 (14) |
| C1 | 0.0153 (7) | 0.0141 (8) | 0.0163 (7) | −0.0008 (6) | 0.0044 (5) | 0.0002 (6) |
| S2 | 0.0203 (2) | 0.0195 (2) | 0.01605 (19) | 0.00695 (15) | 0.00537 (14) | 0.00125 (15) |
| C2 | 0.0181 (7) | 0.0188 (8) | 0.0198 (8) | 0.0078 (6) | 0.0035 (6) | 0.0031 (6) |
| C3 | 0.0130 (7) | 0.0213 (8) | 0.0180 (7) | 0.0056 (6) | 0.0012 (5) | 0.0007 (6) |
| C8 | 0.0185 (7) | 0.0202 (8) | 0.0258 (8) | 0.0040 (6) | 0.0022 (6) | −0.0008 (7) |
| C7 | 0.0236 (8) | 0.0294 (10) | 0.0202 (8) | 0.0079 (7) | 0.0010 (6) | −0.0066 (7) |
| C6 | 0.0198 (8) | 0.0365 (10) | 0.0172 (8) | 0.0089 (7) | 0.0032 (6) | 0.0032 (7) |
| C5 | 0.0206 (8) | 0.0258 (9) | 0.0258 (8) | 0.0035 (7) | 0.0042 (6) | 0.0048 (7) |
| C4 | 0.0194 (7) | 0.0196 (8) | 0.0206 (8) | 0.0037 (6) | 0.0020 (6) | −0.0019 (6) |
| N1 | 0.0182 (6) | 0.0142 (7) | 0.0177 (6) | 0.0033 (5) | 0.0064 (5) | 0.0000 (5) |
| N2 | 0.0178 (6) | 0.0135 (7) | 0.0213 (7) | 0.0013 (5) | 0.0072 (5) | 0.0002 (5) |
| C9 | 0.0187 (7) | 0.0147 (8) | 0.0189 (7) | −0.0001 (6) | 0.0059 (6) | 0.0008 (6) |
| C10 | 0.0154 (7) | 0.0133 (8) | 0.0189 (7) | −0.0012 (6) | 0.0059 (6) | 0.0012 (6) |
| C15 | 0.0174 (7) | 0.0161 (8) | 0.0167 (7) | −0.0015 (6) | 0.0034 (6) | −0.0004 (6) |
| C14 | 0.0138 (7) | 0.0160 (8) | 0.0180 (7) | 0.0000 (6) | 0.0020 (5) | 0.0028 (6) |
| C13 | 0.0142 (7) | 0.0128 (7) | 0.0201 (7) | 0.0009 (6) | 0.0059 (6) | 0.0015 (6) |
| O2 | 0.0195 (5) | 0.0177 (6) | 0.0191 (5) | 0.0067 (4) | 0.0032 (4) | −0.0014 (4) |
| C17 | 0.0189 (8) | 0.0195 (8) | 0.0238 (8) | 0.0068 (6) | 0.0049 (6) | 0.0032 (6) |
| C12 | 0.0176 (7) | 0.0176 (8) | 0.0156 (7) | −0.0004 (6) | 0.0038 (6) | 0.0003 (6) |
| C11 | 0.0159 (7) | 0.0160 (8) | 0.0190 (7) | 0.0018 (6) | 0.0027 (6) | 0.0040 (6) |
| O1 | 0.0255 (6) | 0.0276 (7) | 0.0170 (5) | 0.0088 (5) | 0.0000 (4) | −0.0037 (5) |
| C16 | 0.0241 (8) | 0.0318 (10) | 0.0162 (8) | 0.0025 (7) | −0.0003 (6) | 0.0013 (7) |
| S21 | 0.01906 (19) | 0.0154 (2) | 0.01649 (19) | 0.00483 (15) | 0.00539 (14) | −0.00063 (14) |
| C21 | 0.0168 (7) | 0.0135 (8) | 0.0163 (7) | −0.0011 (6) | 0.0058 (6) | −0.0015 (6) |
| S22 | 0.0232 (2) | 0.0181 (2) | 0.01609 (19) | 0.00641 (16) | 0.00685 (14) | 0.00131 (15) |
| C22 | 0.0188 (7) | 0.0184 (8) | 0.0194 (8) | 0.0056 (6) | 0.0048 (6) | 0.0033 (6) |
| C23 | 0.0195 (7) | 0.0150 (8) | 0.0194 (8) | 0.0056 (6) | 0.0049 (6) | 0.0028 (6) |
| C28 | 0.0182 (8) | 0.0207 (9) | 0.0265 (8) | 0.0040 (6) | 0.0021 (6) | 0.0019 (7) |
| C27 | 0.0250 (8) | 0.0244 (9) | 0.0230 (8) | 0.0058 (7) | −0.0020 (6) | 0.0001 (7) |
| C26 | 0.0309 (9) | 0.0240 (9) | 0.0181 (8) | 0.0073 (7) | 0.0048 (7) | 0.0044 (7) |
| C25 | 0.0253 (8) | 0.0245 (9) | 0.0236 (8) | −0.0004 (7) | 0.0055 (7) | 0.0035 (7) |
| C24 | 0.0215 (8) | 0.0234 (9) | 0.0208 (8) | 0.0004 (7) | 0.0023 (6) | 0.0009 (6) |
| N21 | 0.0193 (6) | 0.0153 (7) | 0.0166 (6) | 0.0037 (5) | 0.0069 (5) | −0.0002 (5) |
| N22 | 0.0189 (6) | 0.0134 (7) | 0.0217 (7) | 0.0019 (5) | 0.0090 (5) | 0.0001 (5) |
| C29 | 0.0178 (7) | 0.0157 (8) | 0.0168 (7) | −0.0023 (6) | 0.0056 (6) | −0.0007 (6) |
| C30 | 0.0152 (7) | 0.0124 (7) | 0.0202 (7) | −0.0007 (6) | 0.0067 (6) | 0.0014 (6) |
| C31 | 0.0176 (7) | 0.0158 (8) | 0.0148 (7) | −0.0020 (6) | 0.0031 (6) | −0.0016 (6) |
| C32 | 0.0142 (7) | 0.0169 (8) | 0.0172 (7) | 0.0010 (6) | 0.0014 (5) | 0.0027 (6) |
| C33 | 0.0148 (7) | 0.0138 (8) | 0.0184 (7) | 0.0006 (6) | 0.0047 (6) | 0.0010 (6) |
| O21 | 0.0193 (5) | 0.0178 (6) | 0.0190 (5) | 0.0068 (4) | 0.0031 (4) | −0.0009 (4) |
| C36 | 0.0185 (7) | 0.0173 (8) | 0.0244 (8) | 0.0066 (6) | 0.0049 (6) | 0.0038 (6) |
| C34 | 0.0185 (7) | 0.0172 (8) | 0.0146 (7) | −0.0001 (6) | 0.0047 (6) | 0.0007 (6) |
| C35 | 0.0166 (7) | 0.0173 (8) | 0.0171 (7) | 0.0035 (6) | 0.0024 (6) | 0.0032 (6) |
| O22 | 0.0262 (6) | 0.0276 (7) | 0.0139 (5) | 0.0110 (5) | 0.0005 (4) | −0.0025 (5) |
| C37 | 0.0242 (8) | 0.0298 (10) | 0.0146 (7) | 0.0055 (7) | 0.0013 (6) | 0.0013 (7) |
Geometric parameters (Å, º)
| S1—C1 | 1.6807 (15) | S21—C21 | 1.6774 (15) |
| C1—S2 | 1.7494 (15) | C21—S22 | 1.7494 (15) |
| C1—N1 | 1.331 (2) | C21—N21 | 1.336 (2) |
| S2—C2 | 1.8244 (15) | S22—C22 | 1.8294 (16) |
| C2—C3 | 1.516 (2) | C22—C23 | 1.507 (2) |
| C2—H21 | 0.983 | C22—H221 | 0.973 |
| C2—H22 | 0.980 | C22—H222 | 0.968 |
| C3—C8 | 1.395 (2) | C23—C28 | 1.396 (2) |
| C3—C4 | 1.392 (2) | C23—C24 | 1.397 (2) |
| C8—C7 | 1.388 (2) | C28—C27 | 1.390 (2) |
| C8—H81 | 0.956 | C28—H281 | 0.935 |
| C7—C6 | 1.386 (3) | C27—C26 | 1.384 (3) |
| C7—H71 | 0.921 | C27—H271 | 0.952 |
| C6—C5 | 1.391 (3) | C26—C25 | 1.393 (2) |
| C6—H61 | 0.944 | C26—H261 | 0.948 |
| C5—C4 | 1.390 (2) | C25—C24 | 1.387 (2) |
| C5—H51 | 0.947 | C25—H251 | 0.953 |
| C4—H41 | 0.941 | C24—H241 | 0.947 |
| N1—N2 | 1.3845 (18) | N21—N22 | 1.3820 (18) |
| N1—H2 | 0.924 | N21—H1 | 0.874 |
| N2—C9 | 1.282 (2) | N22—C29 | 1.280 (2) |
| C9—C10 | 1.460 (2) | C29—C30 | 1.462 (2) |
| C9—H91 | 0.945 | C29—H291 | 0.932 |
| C10—C15 | 1.393 (2) | C30—C31 | 1.392 (2) |
| C10—C11 | 1.407 (2) | C30—C35 | 1.406 (2) |
| C15—C14 | 1.396 (2) | C31—C32 | 1.399 (2) |
| C15—H151 | 0.951 | C31—H311 | 0.948 |
| C14—C13 | 1.383 (2) | C32—C33 | 1.379 (2) |
| C14—H141 | 0.948 | C32—H321 | 0.944 |
| C13—O2 | 1.3612 (18) | C33—O21 | 1.3628 (18) |
| C13—C12 | 1.421 (2) | C33—C34 | 1.422 (2) |
| O2—C17 | 1.4325 (18) | O21—C36 | 1.4362 (18) |
| C17—H171 | 0.961 | C36—H361 | 0.963 |
| C17—H172 | 0.964 | C36—H362 | 0.965 |
| C17—H173 | 0.979 | C36—H363 | 0.965 |
| C12—C11 | 1.381 (2) | C34—C35 | 1.377 (2) |
| C12—O1 | 1.3603 (19) | C34—O22 | 1.3592 (19) |
| C11—H111 | 0.938 | C35—H351 | 0.927 |
| O1—C16 | 1.4273 (19) | O22—C37 | 1.4272 (18) |
| C16—H161 | 0.943 | C37—H371 | 0.972 |
| C16—H162 | 0.968 | C37—H372 | 0.969 |
| C16—H163 | 0.970 | C37—H373 | 0.976 |
| S1—C1—S2 | 125.49 (9) | S21—C21—S22 | 124.90 (9) |
| S1—C1—N1 | 120.52 (11) | S21—C21—N21 | 120.52 (11) |
| S2—C1—N1 | 113.98 (11) | S22—C21—N21 | 114.57 (11) |
| C1—S2—C2 | 102.05 (7) | C21—S22—C22 | 101.97 (7) |
| S2—C2—C3 | 107.65 (10) | S22—C22—C23 | 107.26 (10) |
| S2—C2—H21 | 110.3 | S22—C22—H221 | 109.5 |
| C3—C2—H21 | 109.7 | C23—C22—H221 | 112.0 |
| S2—C2—H22 | 107.9 | S22—C22—H222 | 109.4 |
| C3—C2—H22 | 110.5 | C23—C22—H222 | 109.2 |
| H21—C2—H22 | 110.7 | H221—C22—H222 | 109.4 |
| C2—C3—C8 | 121.01 (15) | C22—C23—C28 | 121.20 (14) |
| C2—C3—C4 | 119.67 (15) | C22—C23—C24 | 119.74 (15) |
| C8—C3—C4 | 119.32 (15) | C28—C23—C24 | 119.05 (14) |
| C3—C8—C7 | 120.44 (16) | C23—C28—C27 | 120.27 (15) |
| C3—C8—H81 | 119.0 | C23—C28—H281 | 119.7 |
| C7—C8—H81 | 120.5 | C27—C28—H281 | 120.1 |
| C8—C7—C6 | 120.09 (16) | C28—C27—C26 | 120.38 (16) |
| C8—C7—H71 | 120.5 | C28—C27—H271 | 119.6 |
| C6—C7—H71 | 119.5 | C26—C27—H271 | 120.0 |
| C7—C6—C5 | 119.73 (15) | C27—C26—C25 | 119.76 (15) |
| C7—C6—H61 | 118.7 | C27—C26—H261 | 119.1 |
| C5—C6—H61 | 121.5 | C25—C26—H261 | 121.2 |
| C6—C5—C4 | 120.34 (16) | C26—C25—C24 | 120.09 (16) |
| C6—C5—H51 | 119.1 | C26—C25—H251 | 120.4 |
| C4—C5—H51 | 120.6 | C24—C25—H251 | 119.5 |
| C3—C4—C5 | 120.06 (16) | C23—C24—C25 | 120.44 (16) |
| C3—C4—H41 | 118.9 | C23—C24—H241 | 119.1 |
| C5—C4—H41 | 121.1 | C25—C24—H241 | 120.4 |
| C1—N1—N2 | 120.71 (13) | C21—N21—N22 | 120.85 (12) |
| C1—N1—H2 | 118.7 | C21—N21—H1 | 116.4 |
| N2—N1—H2 | 120.6 | N22—N21—H1 | 121.9 |
| N1—N2—C9 | 113.83 (13) | N21—N22—C29 | 114.27 (13) |
| N2—C9—C10 | 122.28 (14) | N22—C29—C30 | 121.69 (14) |
| N2—C9—H91 | 120.4 | N22—C29—H291 | 120.7 |
| C10—C9—H91 | 117.3 | C30—C29—H291 | 117.6 |
| C9—C10—C15 | 117.98 (14) | C29—C30—C31 | 119.12 (14) |
| C9—C10—C11 | 122.42 (14) | C29—C30—C35 | 121.40 (14) |
| C15—C10—C11 | 119.58 (14) | C31—C30—C35 | 119.45 (14) |
| C10—C15—C14 | 120.50 (14) | C30—C31—C32 | 120.54 (14) |
| C10—C15—H151 | 120.0 | C30—C31—H311 | 119.1 |
| C14—C15—H151 | 119.5 | C32—C31—H311 | 120.4 |
| C15—C14—C13 | 120.08 (14) | C31—C32—C33 | 120.09 (14) |
| C15—C14—H141 | 119.4 | C31—C32—H321 | 118.2 |
| C13—C14—H141 | 120.5 | C33—C32—H321 | 121.7 |
| C14—C13—O2 | 125.39 (14) | C32—C33—O21 | 125.73 (13) |
| C14—C13—C12 | 119.77 (14) | C32—C33—C34 | 119.65 (14) |
| O2—C13—C12 | 114.83 (13) | O21—C33—C34 | 114.59 (13) |
| C13—O2—C17 | 117.10 (12) | C33—O21—C36 | 117.04 (12) |
| O2—C17—H171 | 106.1 | O21—C36—H361 | 105.8 |
| O2—C17—H172 | 111.9 | O21—C36—H362 | 108.9 |
| H171—C17—H172 | 109.6 | H361—C36—H362 | 109.9 |
| O2—C17—H173 | 109.3 | O21—C36—H363 | 110.1 |
| H171—C17—H173 | 109.9 | H361—C36—H363 | 110.9 |
| H172—C17—H173 | 110.0 | H362—C36—H363 | 111.1 |
| C13—C12—C11 | 119.89 (14) | C33—C34—C35 | 120.06 (14) |
| C13—C12—O1 | 114.08 (14) | C33—C34—O22 | 114.49 (13) |
| C11—C12—O1 | 126.01 (14) | C35—C34—O22 | 125.43 (14) |
| C10—C11—C12 | 120.16 (14) | C30—C35—C34 | 120.20 (14) |
| C10—C11—H111 | 120.7 | C30—C35—H351 | 119.0 |
| C12—C11—H111 | 119.1 | C34—C35—H351 | 120.8 |
| C12—O1—C16 | 117.16 (12) | C34—O22—C37 | 116.40 (12) |
| O1—C16—H161 | 106.2 | O22—C37—H371 | 104.2 |
| O1—C16—H162 | 110.2 | O22—C37—H372 | 110.0 |
| H161—C16—H162 | 111.1 | H371—C37—H372 | 111.9 |
| O1—C16—H163 | 110.8 | O22—C37—H373 | 109.3 |
| H161—C16—H163 | 110.4 | H371—C37—H373 | 112.0 |
| H162—C16—H163 | 108.1 | H372—C37—H373 | 109.2 |
Hydrogen-bond geometry (Å, º)
Cg1, Cg2 and Cg4 are the centroids of the C3–C8, C10–C15 and C30–C35 rings, respectively.
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H2···S21 | 0.92 | 2.52 | 3.418 (1) | 166 |
| N21—H1···S1 | 0.87 | 2.55 | 3.407 (1) | 168 |
| C16—H163···O21i | 0.97 | 2.69 | 3.560 (2) | 149 |
| C17—H172···Cg4ii | 0.97 | 2.74 | 3.5587 (18) | 143 |
| C28—H281···Cg1ii | 0.94 | 2.94 | 3.6082 (18) | 130 |
| C36—H363···Cg2i | 0.97 | 2.67 | 3.5023 (17) | 145 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+2, −y+1, −z+1.
References
- Betteridge, P. W., Carruthers, J. R., Cooper, R. I., Prout, K. & Watkin, D. J. (2003). J. Appl. Cryst. 36, 1487.
- Break, M. K. bin, Tahir, M. I. M., Crouse, K. A. & Khoo, T.-J. (2013). Bioinorganic Chemistry and Applications, Vol. 2013, Article ID 362513, 13 pages. http//dx..org/10.1155/2013/362513 [DOI] [PMC free article] [PubMed]
- Fan, Z., Huang, Y.-L., Wang, Z., Guo, H.-Q. & Shan, S. (2011). Acta Cryst. E67, o3011. [DOI] [PMC free article] [PubMed]
- Groom, C. R. & Allen, F. H. (2014). Angew. Chem. Int. Ed. 53, 662–671. [DOI] [PubMed]
- Khoo, T.-J., Break, M. K., bin, , Crouse, K. A., Tahir, M. I. M., Ali, A. M., Cowley, A. R., Watkin, D. & Tarafder, M. T. H. (2014). Inorg. Chim. Acta, 413, 68–76.
- Macrae, C. F., Bruno, I. J., Chisholm, J. A., Edgington, P. R., McCabe, P., Pidcock, E., Rodriguez-Monge, L., Taylor, R., van de Streek, J. & Wood, P. A. (2008). J. Appl. Cryst. 41, 466–470.
- Oxford Diffraction (2002). CrysAlis CCD and CrysAlis RED. Oxford Diffraction Ltd, Abingdon, England.
- Palatinus, L. & Chapuis, G. (2007). J. Appl. Cryst. 40, 786–790.
- Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S205698901500095X/su5044sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S205698901500095X/su5044Isup2.hkl
Supporting information file. DOI: 10.1107/S205698901500095X/su5044Isup3.cml
CCDC reference: 1043887
Additional supporting information: crystallographic information; 3D view; checkCIF report




