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Acta Crystallographica Section E: Crystallographic Communications logoLink to Acta Crystallographica Section E: Crystallographic Communications
. 2015 Jan 28;71(Pt 2):o137–o138. doi: 10.1107/S2056989015001401

Crystal structure of 3-{(E)-[(3,4-di­chloro­phen­yl)imino]­meth­yl}benzene-1,2-diol

Muhammad Nawaz Tahir a,*, Hazoor Ahmad Shad b, Abdul Rauf c, Abdul Haleem Khan d
PMCID: PMC4384559  PMID: 25878871

Abstract

In the title Schiff base, C13H9Cl2NO2, which arose from the condensation of 3,4-di­chloro­aniline with 2,3-di­hydroxy­benzaldehyde, the dihedral angle between the aromatic rings is 44.74 (13)°. Intra­molecular O—H⋯O and O—H⋯N hydrogen bonds close S(5) and S(6) rings, respectively. In the crystal, inversion dimers linked by pairs of O—H⋯O hydrogen bonds generate R 2 2(10) loops. A weak C—H⋯π inter­action is also observed.

Keywords: crystal structure; benzene-1,2-diol; Schiff base; hydrogen bonding

Related literature  

For related structures, see: Fun et al. (2011); Keleşoğlu et al. (2009); Shuja et al. (2006); Tahir et al. (2012); Temel et al. (2007).graphic file with name e-71-0o137-scheme1.jpg

Experimental  

Crystal data  

  • C13H9Cl2NO2

  • M r = 282.11

  • Triclinic, Inline graphic

  • a = 6.4237 (8) Å

  • b = 8.8412 (11) Å

  • c = 11.7799 (15) Å

  • α = 88.606 (6)°

  • β = 76.588 (6)°

  • γ = 70.193 (5)°

  • V = 611.20 (13) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.52 mm−1

  • T = 296 K

  • 0.34 × 0.26 × 0.20 mm

Data collection  

  • Bruker Kappa APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2005) T min = 0.844, T max = 0.902

  • 8896 measured reflections

  • 2671 independent reflections

  • 1866 reflections with I > 2σ(I)

  • R int = 0.042

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.052

  • wR(F 2) = 0.164

  • S = 1.04

  • 2671 reflections

  • 165 parameters

  • H-atom parameters constrained

  • Δρmax = 0.33 e Å−3

  • Δρmin = −0.33 e Å−3

Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2015); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and PLATON (Spek, 2009); software used to prepare material for publication: WinGX (Farrugia, 2012) and PLATON.

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015001401/hb7353sup1.cif

e-71-0o137-sup1.cif (20.5KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015001401/hb7353Isup2.hkl

e-71-0o137-Isup2.hkl (146.8KB, hkl)

Supporting information file. DOI: 10.1107/S2056989015001401/hb7353Isup3.cml

. DOI: 10.1107/S2056989015001401/hb7353fig1.tif

View of the title compound with displacement ellipsoids drawn at the 50% probability level.

PLATON . DOI: 10.1107/S2056989015001401/hb7353fig2.tif

The partial packing (PLATON; Spek, 2009), which shows that mol­ecules form dimers due to O—H⋯O inter­actions.

CCDC reference: 1044861

Additional supporting information: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (, ).

Cg1 is the centroid of the benzene ring (C1C6).

DHA DH HA D A DHA
O1H1N1 0.82 1.89 2.608(3) 146
O2H2O1 0.82 2.28 2.729(3) 115
O2H2O1i 0.82 2.20 2.846(3) 136
C12H12Cg1ii 0.93 2.83 3.538(4) 134

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The authors acknowledge the provision of funds for the purchase of diffractometer and encouragement by Dr. Muhammad Akram Chaudhary, Vice Chancellor, University of Sargodha, Pakistan.

supplementary crystallographic information

S1. Comment

The title compound (I), (Fig. 1) has been synthesized for forming different metal complexes.

The crystal structures of 2-[(E)-(2,4,6-trichlorophenyl)iminomethyl] phenol (Fun et al., 2011), (E)-3-((2-fluorophenylimino)methyl) benzene-1,2-diol (Temel et al., 2007), (E)-3-[(3-bromophenyl) iminomethyl]benzene-1,2-diol (Kelesoglu et al., 2009), 4-([(E)-2, 3-dihydroxybenzylidene]amino)-N-(5-methyl-1,2-oxazol-3-yl)benzenesulfonamide (Tahir et al., 2012) and 3-(4-bromophenyliminomethyl)benzene-1,2-diol (Shuja et al., 2006) have been published which are related to the title compound due to two moieties of the Schiff base.

In (I) the moieties of 2,3-dihydroxybenzaldehyde A (C1–C7/O1/O2) and 3,4-dichloroanilline B (C8—13/N1/CL1/CL2) are almost planar with r.m.s. deviation of 0.0225 and 0.0172 Å, respectively. The dihedral angle between A/B is 44.219 (50)°. In (I), S(5) and S(6) ring motifs are present due to H-bondings of O—H···O and O—H···N types (Table 1, Fig. 2). The molecules are dimerized due to bifercated H-bonding of O—H···O type (Table 1, Fig. 2). There exist C—H···π (Table 1) and π···π interactions to stablize the dimmers. A π···π interactions between Cg1···Cg1i [i = -x, 2 - y, 1 - z] at a distance of 3.9101 (15) Å, where Cg1 is centroid of benzene ring (C1—C6) exists. Similarly, there is π···π interactions between Cg2···Cg2ii [il = 1 - x, 1 - y, - z] at a distance of 4.1194 (17) Å, where Cg2 is centroid of benzene ring (C8—C13).

S2. Experimental

Equimolar quantities of 3,4-dichloroanilline and 2,3-dihydroxybenzaldehyde were refluxed in methanol for 2 h. The resulting mixture was evaporated to grow crystals. Red prisms were obtained after 48 h.

S3. Refinement

The H-atoms were positioned geometrically (C–H = 0.93 Å, O—H = 0.82 Å) and refined as riding with Uiso(H) = xUeq(C, O), where x = 1.5 for hydroxy and x = 1.2 for other H-atoms.

Figures

Fig. 1.

Fig. 1.

View of the title compound with displacement ellipsoids drawn at the 50% probability level.

Fig. 2.

Fig. 2.

The partial packing (PLATON; Spek, 2009), which shows that molecules form dimers due to O—H···O interactions.

Crystal data

C13H9Cl2NO2 Z = 2
Mr = 282.11 F(000) = 284
Triclinic, P1 Dx = 1.533 Mg m3
a = 6.4237 (8) Å Mo Kα radiation, λ = 0.71073 Å
b = 8.8412 (11) Å Cell parameters from 1866 reflections
c = 11.7799 (15) Å θ = 1.8–27.0°
α = 88.606 (6)° µ = 0.52 mm1
β = 76.588 (6)° T = 296 K
γ = 70.193 (5)° Prism, red
V = 611.20 (13) Å3 0.34 × 0.26 × 0.20 mm

Data collection

Bruker Kappa APEXII CCD diffractometer 2671 independent reflections
Radiation source: fine-focus sealed tube 1866 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.042
Detector resolution: 7.80 pixels mm-1 θmax = 27.0°, θmin = 1.8°
ω scans h = −8→7
Absorption correction: multi-scan (SADABS; Bruker, 2005) k = −11→9
Tmin = 0.844, Tmax = 0.902 l = −14→15
8896 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.052 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.164 H-atom parameters constrained
S = 1.04 w = 1/[σ2(Fo2) + (0.0781P)2 + 0.3755P] where P = (Fo2 + 2Fc2)/3
2671 reflections (Δ/σ)max < 0.001
165 parameters Δρmax = 0.33 e Å3
0 restraints Δρmin = −0.32 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Cl1 0.24642 (15) 0.26936 (10) 0.01956 (8) 0.0657 (3)
Cl2 0.73742 (15) 0.11968 (10) 0.06575 (9) 0.0707 (3)
O1 −0.2559 (3) 0.9592 (2) 0.38833 (19) 0.0508 (5)
H1 −0.1671 0.8794 0.3473 0.076*
O2 −0.4973 (3) 1.2453 (3) 0.5138 (2) 0.0594 (6)
H2 −0.5353 1.1679 0.5037 0.089*
N1 0.1345 (4) 0.7735 (3) 0.2617 (2) 0.0452 (6)
C1 −0.1526 (5) 1.0707 (3) 0.3887 (2) 0.0388 (6)
C2 −0.2793 (5) 1.2167 (3) 0.4525 (2) 0.0440 (6)
C3 −0.1834 (5) 1.3338 (3) 0.4543 (2) 0.0478 (7)
H3 −0.2694 1.4313 0.4964 0.057*
C4 0.0401 (5) 1.3083 (4) 0.3943 (3) 0.0516 (7)
H4 0.1030 1.3886 0.3954 0.062*
C5 0.1694 (5) 1.1613 (4) 0.3322 (3) 0.0494 (7)
H5 0.3201 1.1427 0.2932 0.059*
C6 0.0738 (5) 1.0419 (3) 0.3285 (2) 0.0409 (6)
C7 0.2124 (5) 0.8875 (3) 0.2674 (2) 0.0440 (6)
H7 0.3638 0.8708 0.2309 0.053*
C8 0.2859 (5) 0.6190 (3) 0.2123 (2) 0.0433 (6)
C9 0.2070 (5) 0.5315 (3) 0.1462 (2) 0.0464 (7)
H9 0.0614 0.5751 0.1334 0.056*
C10 0.3479 (5) 0.3784 (3) 0.0998 (2) 0.0447 (6)
C11 0.5634 (5) 0.3123 (3) 0.1205 (2) 0.0471 (7)
C12 0.6396 (5) 0.3969 (4) 0.1879 (3) 0.0490 (7)
H12 0.7834 0.3514 0.2027 0.059*
C13 0.5000 (5) 0.5513 (3) 0.2339 (2) 0.0480 (7)
H13 0.5511 0.6091 0.2793 0.058*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Cl1 0.0749 (6) 0.0607 (5) 0.0663 (5) −0.0278 (4) −0.0167 (4) −0.0188 (4)
Cl2 0.0675 (6) 0.0459 (5) 0.0815 (6) −0.0049 (4) −0.0040 (4) −0.0243 (4)
O1 0.0505 (11) 0.0377 (10) 0.0591 (13) −0.0162 (9) 0.0005 (9) −0.0157 (9)
O2 0.0502 (12) 0.0463 (12) 0.0765 (15) −0.0184 (10) 0.0001 (11) −0.0216 (11)
N1 0.0488 (13) 0.0387 (12) 0.0405 (12) −0.0089 (10) −0.0041 (10) −0.0057 (10)
C1 0.0451 (14) 0.0348 (13) 0.0361 (13) −0.0133 (11) −0.0086 (11) −0.0023 (10)
C2 0.0503 (16) 0.0365 (14) 0.0419 (14) −0.0111 (12) −0.0094 (12) −0.0072 (11)
C3 0.0619 (18) 0.0362 (14) 0.0423 (15) −0.0117 (13) −0.0133 (13) −0.0077 (12)
C4 0.067 (2) 0.0455 (16) 0.0519 (17) −0.0291 (15) −0.0173 (15) 0.0016 (13)
C5 0.0536 (17) 0.0495 (16) 0.0469 (16) −0.0240 (14) −0.0058 (13) −0.0009 (13)
C6 0.0489 (15) 0.0346 (13) 0.0355 (13) −0.0114 (12) −0.0070 (11) −0.0001 (11)
C7 0.0473 (15) 0.0405 (14) 0.0372 (14) −0.0113 (12) −0.0016 (11) −0.0053 (11)
C8 0.0508 (16) 0.0365 (14) 0.0359 (14) −0.0124 (12) −0.0007 (12) −0.0059 (11)
C9 0.0490 (16) 0.0435 (15) 0.0442 (15) −0.0146 (13) −0.0073 (12) −0.0045 (12)
C10 0.0531 (16) 0.0436 (15) 0.0373 (14) −0.0198 (13) −0.0051 (12) −0.0047 (11)
C11 0.0524 (16) 0.0396 (14) 0.0406 (15) −0.0113 (13) 0.0001 (12) −0.0070 (12)
C12 0.0469 (16) 0.0486 (16) 0.0463 (16) −0.0102 (13) −0.0094 (13) −0.0060 (13)
C13 0.0546 (17) 0.0455 (16) 0.0422 (15) −0.0160 (13) −0.0089 (13) −0.0103 (12)

Geometric parameters (Å, º)

Cl1—C10 1.733 (3) C4—H4 0.9300
Cl2—C11 1.731 (3) C5—C6 1.396 (4)
O1—C1 1.363 (3) C5—H5 0.9300
O1—H1 0.8200 C6—C7 1.450 (4)
O2—C2 1.359 (3) C7—H7 0.9300
O2—H2 0.8200 C8—C13 1.383 (4)
N1—C7 1.277 (4) C8—C9 1.392 (4)
N1—C8 1.423 (3) C9—C10 1.388 (4)
C1—C2 1.394 (4) C9—H9 0.9300
C1—C6 1.401 (4) C10—C11 1.385 (4)
C2—C3 1.375 (4) C11—C12 1.373 (4)
C3—C4 1.390 (4) C12—C13 1.394 (4)
C3—H3 0.9300 C12—H12 0.9300
C4—C5 1.395 (4) C13—H13 0.9300
C1—O1—H1 109.5 N1—C7—C6 122.5 (3)
C2—O2—H2 109.5 N1—C7—H7 118.7
C7—N1—C8 119.6 (2) C6—C7—H7 118.7
O1—C1—C2 117.8 (2) C13—C8—C9 119.9 (2)
O1—C1—C6 122.1 (2) C13—C8—N1 122.1 (3)
C2—C1—C6 120.1 (2) C9—C8—N1 117.9 (3)
O2—C2—C3 119.1 (2) C10—C9—C8 119.3 (3)
O2—C2—C1 120.9 (2) C10—C9—H9 120.3
C3—C2—C1 120.0 (3) C8—C9—H9 120.3
C2—C3—C4 120.9 (3) C11—C10—C9 120.3 (3)
C2—C3—H3 119.6 C11—C10—Cl1 120.7 (2)
C4—C3—H3 119.6 C9—C10—Cl1 118.9 (2)
C3—C4—C5 119.5 (3) C12—C11—C10 120.5 (3)
C3—C4—H4 120.3 C12—C11—Cl2 118.9 (2)
C5—C4—H4 120.3 C10—C11—Cl2 120.6 (2)
C4—C5—C6 120.3 (3) C11—C12—C13 119.5 (3)
C4—C5—H5 119.8 C11—C12—H12 120.2
C6—C5—H5 119.8 C13—C12—H12 120.2
C5—C6—C1 119.3 (2) C8—C13—C12 120.4 (3)
C5—C6—C7 119.8 (3) C8—C13—H13 119.8
C1—C6—C7 120.9 (2) C12—C13—H13 119.8
O1—C1—C2—O2 1.1 (4) C1—C6—C7—N1 2.5 (4)
C6—C1—C2—O2 −178.3 (3) C7—N1—C8—C13 40.5 (4)
O1—C1—C2—C3 −179.2 (3) C7—N1—C8—C9 −143.4 (3)
C6—C1—C2—C3 1.4 (4) C13—C8—C9—C10 −1.9 (4)
O2—C2—C3—C4 179.0 (3) N1—C8—C9—C10 −178.1 (2)
C1—C2—C3—C4 −0.7 (4) C8—C9—C10—C11 1.0 (4)
C2—C3—C4—C5 −0.6 (4) C8—C9—C10—Cl1 179.0 (2)
C3—C4—C5—C6 1.3 (5) C9—C10—C11—C12 0.5 (4)
C4—C5—C6—C1 −0.7 (4) Cl1—C10—C11—C12 −177.5 (2)
C4—C5—C6—C7 −177.7 (3) C9—C10—C11—Cl2 178.5 (2)
O1—C1—C6—C5 179.9 (3) Cl1—C10—C11—Cl2 0.5 (4)
C2—C1—C6—C5 −0.7 (4) C10—C11—C12—C13 −1.1 (4)
O1—C1—C6—C7 −3.1 (4) Cl2—C11—C12—C13 −179.1 (2)
C2—C1—C6—C7 176.3 (3) C9—C8—C13—C12 1.3 (4)
C8—N1—C7—C6 −172.6 (2) N1—C8—C13—C12 177.3 (3)
C5—C6—C7—N1 179.5 (3) C11—C12—C13—C8 0.2 (4)

Hydrogen-bond geometry (Å, º)

Cg1 is the centroid of the benzene ring (C1–C6).

D—H···A D—H H···A D···A D—H···A
O1—H1···N1 0.82 1.89 2.608 (3) 146
O2—H2···O1 0.82 2.28 2.729 (3) 115
O2—H2···O1i 0.82 2.20 2.846 (3) 136
C12—H12···Cg1ii 0.93 2.83 3.538 (4) 134

Symmetry codes: (i) −x−1, −y+2, −z+1; (ii) x+1, y−1, z.

Footnotes

Supporting information for this paper is available from the IUCr electronic archives (Reference: HB7353).

References

  1. Bruker (2005). SADABS. Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Bruker (2007). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854.
  4. Fun, H.-K., Quah, C. K., Viveka, S., Madhukumar, D. J. & Nagaraja, G. K. (2011). Acta Cryst. E67, o1934. [DOI] [PMC free article] [PubMed]
  5. Keleşoğlu, Z., Büyükgüngör, O., Albayrak, Ç. & Odabaşoğlu, M. (2009). Acta Cryst. E65, o2410–o2411. [DOI] [PMC free article] [PubMed]
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Sheldrick, G. M. (2015). Acta Cryst. C71, 3–8.
  8. Shuja, S., Ali, S., Shahzadi, S., Labat, G. & Stoeckli-Evans, H. (2006). Acta Cryst. E62, o4789–o4790.
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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015001401/hb7353sup1.cif

e-71-0o137-sup1.cif (20.5KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015001401/hb7353Isup2.hkl

e-71-0o137-Isup2.hkl (146.8KB, hkl)

Supporting information file. DOI: 10.1107/S2056989015001401/hb7353Isup3.cml

. DOI: 10.1107/S2056989015001401/hb7353fig1.tif

View of the title compound with displacement ellipsoids drawn at the 50% probability level.

PLATON . DOI: 10.1107/S2056989015001401/hb7353fig2.tif

The partial packing (PLATON; Spek, 2009), which shows that mol­ecules form dimers due to O—H⋯O inter­actions.

CCDC reference: 1044861

Additional supporting information: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Crystallographic Communications are provided here courtesy of International Union of Crystallography

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