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Biomedical Optics Express logoLink to Biomedical Optics Express
. 2015 Mar 18;6(4):1351–1352. doi: 10.1364/BOE.6.001351

Multiple-object geometric deformable model for segmentation of macular OCT: errata

Aaron Carass 1,*, Andrew Lang 1, Matthew Hauser 1, Peter A Calabresi 2, Howard S Ying 3, Jerry L Prince 1
PMCID: PMC4399673

Abstract

Boundary errors were incorrectly computed in our paper [ Biomed. Opt. Express 6( 4), 1063 ( 2014)], which resulted from the manual segmentations being incorrectly converted between file formats. In particular, our paper mischaracterized the error of the method in comparison to that of Lang et al. [ Biomed. Opt. Express 6( 4), 1133– 1152 ( 2013)]. We include corrected tables, replacing Tables 1 and 2 in [ Biomed. Opt. Express 6( 4), 1063 ( 2014)].

OCIS codes: (100.0100) Image processing, (170.4470) Ophthalmology, (170.4500) Optical coherence tomography

1. Introduction

The reported errors in [1] were mistakenly computed, due to an an error in conversion between file formats. We include corrected versions of Tables 1 and 2.

Table 1.

Mean (and standard deviations) of the Dice Coefficient across the eight retinal layers. A paired Wilcoxon rank sum test was used to test the significance of any improvement between RF+Graph [2] and our method, with strong significance (an α level of 0.001) in two of the eight layers. However, RF+Graph was also significantly better than MGDM on two of the eight layers. In three of the four remaining layers, MGDM is marginally better than RF+Graph without reaching statistical significance.

Layer Dice Coefficient P-Value

RF+Graph [2] MGDM [1]
RNFL 0.9194 (±0.0378) 0.9205 (±0.0239) 0.976
GCIP 0.9344 (±0.0385) 0.9267 (±0.0276) < 0.001
INL 0.8638 (±0.0249) 0.8437 (±0.0293) < 0.001
OPL 0.8786 (±0.0159) 0.8814 (±0.0194) 0.118
ONL 0.9391 (±0.0118) 0.9414 (±0.0127) 0.208
IS 0.8560 (±0.0363) 0.8558 (±0.0202) 0.940
OS 0.8467 (±0.0442) 0.8675 (±0.0317) < 0.001
RPE 0.8931 (±0.0438) 0.9119 (±0.0312) < 0.001

Indicates that MGDM was significantly better than RF+Graph.

Indicates that RF+Graph was significantly better than MGDM.

Table 2.

Mean absolute errors (and standard deviation) in microns for our method (MGDM) in comparison to RF+Graph [2] on the nine estimated boundaries. A paired Wilcoxon rank sum test was used to compute p-values between the two methods with strong significance (an α level of 0.001) in six of the nine boundaries. However RF+Graph was significantly better than MGDM on one of the nine boundaries.

Boundary Absolute Errors P-Value

RF+Graph [2] MGDM [1]
ILM 2.695 (±0.3591) 2.379 (±0.3990) < 0.001
RNFL-GCL 4.317 (±2.4034) 4.016 (±1.8566) < 0.001
IPL-INL 3.935 (±0.6803) 4.219 (±1.4218) 0.644
INL-OPL 3.467 (±0.6546) 4.237 (±1.1758) < 0.001
OPL-ONL 3.230 (±0.8003) 3.200 (±0.9179) 0.386
ELM 3.033 (±0.8060) 2.675 (±0.5502) < 0.001
IS-OS 2.295 (±0.6965) 1.928 (±0.7384) < 0.001
OS-RPE 4.251 (±1.6164) 3.965 (±1.6033) < 0.001
BrM 3.103 (±1.7818) 2.856 (±1.7498) < 0.001

Overall 3.370 (±1.4080) 3.275 (±1.4909) < 0.001

Indicates that MGDM was significantly better than RF+Graph.

Indicates that RF+Graph was significantly better than MGDM.

2. Discussion and conclusion

Our method (MGDM) still significantly outperforms RF+Graph in six of the nine boundaries and has better overall accuracy. The errors reported for both methods are lower than those reported in [1] and the mean boundary errors reported for the RF+Graph method are now consistent with those reported in [2]. Note that the within subject variation was not included in our computation of the standard deviation, which is why our standard deviations are significantly lower than those reported in [2].

Acknowledgments

This work was supported by the NIH/ NEI R21-EY022150 and the NIH/NINDS R01-NS082347.

References and links

  • 1.Carass A., Lang A., Hauser M., Calabresi P. A., Ying H. S., Prince J. L., “Multiple-object geometric deformable model for segmentation of macular OCT,” Biomed. Opt. Express 5, 1062–1074 (2014). 10.1364/BOE.5.001062 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 2.Lang A., Carass A., Hauser M., Sotirchos E. S., Calabresi P. A., Ying H. S., Prince J. L., “Retinal layer segmentation of macular OCT images using boundary classification,” Biomed. Opt. Express 4, 1133–1152 (2013). 10.1364/BOE.4.001133 [DOI] [PMC free article] [PubMed] [Google Scholar]

Articles from Biomedical Optics Express are provided here courtesy of Optica Publishing Group

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