N—H⋯O, N—H⋯Cl and O—H⋯O hydrogen bonds between cations and anions in the complex salt (C4H7N2)+[Sn(H2O)Cl3(C2O4)]− are responsible for the formation of a three-dimensional network structure.
Keywords: crystal structure, organotin(IV) complex, hydrogen bonds
Abstract
The tin(IV) atom in the complex anion of the title salt, (C4H7N2)[Sn(C2O4)Cl3(H2O)], is in a distorted octahedral coordination environment defined by three chlorido ligands, an oxygen atom from a water molecule and two oxygen atoms from a chelating oxalate anion. The organic cation is linked through a bifurcated N—H⋯O hydrogen bond to the free oxygen atoms of the oxalate ligand of the complex [Sn(H2O)Cl3(C2O4)]− anion. Neighbouring stannate(IV) anions are linked through O—H⋯O hydrogen bonds involving the water molecule and the two non-coordinating oxalate oxygen atoms. In combination with additional N—H⋯Cl hydrogen bonds between cations and anions, a three-dimensional network is spanned.
Chemical Context
With many applications found in catalysis (see, for example: Meneghetti & Meneghetti, 2015 ▸) or as a result of their biological activities (Sirajuddin et al., 2014 ▸), organotin(IV) complexes are still a widely studied class of compounds. For more than two decades, the Senegalese group has focused research on attempts to obtain new halo- and organotin(IV) compounds, especially compounds with oxalato ligands (Gueye et al., 2010 ▸, 2012 ▸, 2014 ▸; Sarr et al., 2015 ▸; Sow et al., 2012 ▸, 2013 ▸).
In this communication we report on the interaction between methyl-2-imidazolium hydrogenoxalate dihydrate and SnCl2·2H2O in methanolic solution, which yielded the title compound, (C4H7N2)[Sn(C2O4)Cl3(H2O)].
Structural commentary
The oxalate anion chelates the [SnCl3(H2O)]+ moiety and completes a distorted octahedral environment around the tin(IV) atom in the anion (Fig. 1 ▸). The Sn—Cl distances [2.359 (2)–2.378 (3) Å] and the Sn—O distances [2.097 (6) Å and 2.111 (6) Å] are similar to those reported for the same anion in ((H3C)4N)[Sn(H2O)Cl3(C2O4)] (Sow et al., 2013 ▸). The pairwise distribution of C—O bond lengths with two shorter [1.235 (12)/1.243 (12) Å for O3/O4] and two longer bonds [1.277 (11)/1.282 (12) Å for O1/O2] is attributed to additional bonding to the SnIV atom for the longer bonds. The water molecule is trans to one of the Cl atoms and the Sn—O5 bond linking the water molecule to the tin(IV) atom [2.124 (7) Å] is slightly longer than the Sn—O bonds involving the oxalate O atoms. The angles in the [Sn(H2O)Cl3(C2O4)]− anion and in the organic cation have typical values.
Figure 1.
The molecular components of the title compound, with atom labels and 50% displacement ellipsoids at the 50% probability level. Hydrogen atoms are drawn as spheres of arbitrary radius.
Supramolecular features
Each complex [Sn(H2O)Cl3(C2O4)]− anion is linked with two other anions through O—H⋯O hydrogen bonds between the water molecules as donor and non-coordinating oxalate O atoms as acceptor groups (Table 1 ▸). The cations are connected to the anions through a bifurcated N—H⋯O hydrogen bond. Additional N—H⋯Cl hydrogen bonding between cations and anions stabilizes this three-dimensional arrangement (Table 1 ▸, Fig. 2 ▸). Topological analysis according to TOPOS (Alexandrov et al., 2011 ▸) reveals a net with 3,5T1 topological type (Fig. 3 ▸).
Table 1. Hydrogen-bond geometry (, ).
| DHA | DH | HA | D A | DHA |
|---|---|---|---|---|
| O5H5AO4i | 0.87 | 1.76 | 2.618(9) | 170 |
| O5H5BO3ii | 0.87 | 1.83 | 2.602(9) | 146 |
| N1H1O3 | 0.88 | 2.32 | 3.010(11) | 136 |
| N1H1O4 | 0.88 | 2.31 | 2.974(10) | 132 |
| N2H2Cl2iii | 0.88 | 2.70 | 3.354(8) | 132 |
| N2H2Cl1iv | 0.88 | 2.84 | 3.435(10) | 126 |
Symmetry codes: (i)
; (ii)
; (iii)
; (iv)
.
Figure 2.
View approximately around the b axis showing a central complex anion acting as a hydrogen-bond donor toward two other anions and as a hydrogen-bond acceptor of three methyl-2-imidazolium cations.
Figure 3.
The 3,5T1 topological network in the structure of the title compound. The purple nodes correspond to the SnIV atoms while the blue nodes are the centres of the organic cations.
Database Survey
A search of the Cambridge Structural Database (Version 5.36 with one update, Groom & Allen, 2014 ▸) returned about 50 different structures with bidentate oxalate anions linked to a SnIV atom, from which 23 have their oxalate anions acting as bridging ligands, while 20 have the same configuration as in the title compound with a pairwise distribution of C—O bond lengths. Four structures include both configurations, see, for example: Gueye et al. (2010 ▸) or Ng et al. (1992 ▸).
Synthesis and crystallization
Crystals of methyl-2-imidazolium hydrogenoxalate dihydrate (L) were obtained by mixing methyl-2-imidazole with oxalic acid in a 1:1 ratio in water and evaporation of the solvent at 333 K. On allowing (L) to react with SnCl2·2H2O in a 1:2 ratio in methanol, crystals of (C4H7N2)+[Sn(H2O)Cl3(C2O4)]− were obtained after slow solvent evaporation at room temperature.
Refinement
Crystal data, data collection and structure refinement details are summarized in Table 2 ▸. H atoms of the water molecules were obtained from a difference map and were refined with an O—H distance of 0.87 Å and U iso(H) = 1.5U eq(O). The other H atoms were positioned geometrically (C—H = 0.95 for aromatic and 0.98 Å for methyl groups; N—H = 0.88 Å) and refined as riding with U iso(H) = xU eq(C,N) with x = 1.5 for methyl and x = 1.2 for all other H atoms.
Table 2. Experimental details.
| Crystal data | |
| Chemical formula | (C4H7N2)[Sn(C2O4)Cl3(H2O)] |
| M r | 414.19 |
| Crystal system, space group | Triclinic, P
|
| Temperature (K) | 120 |
| a, b, c () | 7.4757(9), 8.0857(10), 11.2846(14) |
| , , () | 80.856(8), 83.946(9), 86.587(8) |
| V (3) | 669.05(14) |
| Z | 2 |
| Radiation type | Ga K, = 1.34139 |
| (mm1) | 13.92 |
| Crystal size (mm) | 0.05 0.04 0.04 |
| Data collection | |
| Diffractometer | Bruker Venture Metaljet |
| Absorption correction | Multi-scan (SADABS; Krause et al., 2015 ▸) |
| T min, T max | 0.133, 0.255 |
| No. of measured, independent and observed [I > 2(I)] reflections | 5497, 2520, 1604 |
| R int | 0.112 |
| (sin /)max (1) | 0.619 |
| Refinement | |
| R[F 2 > 2(F 2)], wR(F 2), S | 0.062, 0.150, 1.07 |
| No. of reflections | 2520 |
| No. of parameters | 156 |
| H-atom treatment | H-atom parameters constrained |
| max, min (e 3) | 2.10, 1.23 |
Supplementary Material
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S2056989015005988/wm5136sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015005988/wm5136Isup2.hkl
CCDC reference: 1056053
Additional supporting information: crystallographic information; 3D view; checkCIF report
Acknowledgments
The authors acknowledge the Cheikh Anta Diop University of Dakar (Sénégal), the Canada Foundation for Innovation, Université de Bourgogne and the Université de Montréal for financial support.
supplementary crystallographic information
Crystal data
| (C4H7N2)[Sn(C2O4)Cl3(H2O)] | Z = 2 |
| Mr = 414.19 | F(000) = 400 |
| Triclinic, P1 | Dx = 2.056 Mg m−3 |
| a = 7.4757 (9) Å | Ga Kα radiation, λ = 1.34139 Å |
| b = 8.0857 (10) Å | Cell parameters from 2537 reflections |
| c = 11.2846 (14) Å | θ = 3.5–53.3° |
| α = 80.856 (8)° | µ = 13.92 mm−1 |
| β = 83.946 (9)° | T = 120 K |
| γ = 86.587 (8)° | Block, clear light colourless |
| V = 669.05 (14) Å3 | 0.05 × 0.04 × 0.04 mm |
Data collection
| Bruker Venture Metaljet diffractometer | 2520 independent reflections |
| Radiation source: Metal Jet, Gallium Liquid Metal Jet Source | 1604 reflections with I > 2σ(I) |
| Helios MX Mirror Optics monochromator | Rint = 0.112 |
| Detector resolution: 10.24 pixels mm-1 | θmax = 56.1°, θmin = 4.8° |
| ω and φ scans | h = −8→9 |
| Absorption correction: multi-scan (SADABS; Krause et al., 2015) | k = −9→9 |
| Tmin = 0.133, Tmax = 0.255 | l = −12→13 |
| 5497 measured reflections |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Hydrogen site location: mixed |
| R[F2 > 2σ(F2)] = 0.062 | H-atom parameters constrained |
| wR(F2) = 0.150 | w = 1/[σ2(Fo2) + (0.0517P)2 + 1.7851P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.07 | (Δ/σ)max < 0.001 |
| 2520 reflections | Δρmax = 2.10 e Å−3 |
| 156 parameters | Δρmin = −1.23 e Å−3 |
| 0 restraints |
Special details
| Experimental. X-ray crystallographic data for I were collected from a single-crystal sample, which was mounted on a loop fiber. Data were collected using a Bruker Venture diffractometer equipped with a Photon 100 CMOS Detector, a Helios MX optics and a Kappa goniometer. The crystal-to-detector distance was 4.0 cm, and the data collection was carried out in 1024 x 1024 pixel mode. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| Sn1 | 0.29887 (9) | 0.93269 (8) | 0.27360 (5) | 0.0317 (2) | |
| Cl2 | 0.0743 (4) | 1.0116 (3) | 0.1403 (2) | 0.0435 (6) | |
| Cl3 | 0.3305 (4) | 0.6485 (3) | 0.2412 (2) | 0.0440 (6) | |
| Cl1 | 0.5565 (3) | 1.0303 (3) | 0.1490 (2) | 0.0408 (6) | |
| O1 | 0.4545 (9) | 0.8696 (8) | 0.4197 (5) | 0.0350 (16) | |
| O5 | 0.2658 (9) | 1.1790 (8) | 0.3182 (6) | 0.0353 (16) | |
| H5A | 0.3590 | 1.2042 | 0.3507 | 0.053* | |
| H5B | 0.1714 | 1.1866 | 0.3693 | 0.053* | |
| O3 | 0.0676 (9) | 0.7477 (9) | 0.6101 (6) | 0.0382 (16) | |
| O2 | 0.0984 (9) | 0.8685 (8) | 0.4173 (5) | 0.0346 (15) | |
| O4 | 0.4338 (9) | 0.7392 (9) | 0.6108 (6) | 0.0384 (17) | |
| N1 | 0.2275 (12) | 0.5715 (10) | 0.8327 (7) | 0.042 (2) | |
| H1 | 0.2288 | 0.6585 | 0.7749 | 0.050* | |
| C1 | 0.3663 (13) | 0.8049 (12) | 0.5176 (9) | 0.035 (2) | |
| C5 | 0.2088 (13) | 0.4176 (12) | 0.8164 (9) | 0.034 (2) | |
| C2 | 0.1599 (14) | 0.8079 (13) | 0.5178 (9) | 0.038 (2) | |
| N2 | 0.2132 (12) | 0.3254 (11) | 0.9248 (7) | 0.046 (2) | |
| H2 | 0.2019 | 0.2162 | 0.9399 | 0.055* | |
| C3 | 0.2380 (15) | 0.4238 (12) | 1.0101 (9) | 0.041 (3) | |
| H3 | 0.2481 | 0.3874 | 1.0935 | 0.050* | |
| C4 | 0.2450 (16) | 0.5808 (14) | 0.9517 (9) | 0.044 (3) | |
| H4 | 0.2592 | 0.6791 | 0.9854 | 0.053* | |
| C6 | 0.1870 (14) | 0.3569 (13) | 0.7014 (9) | 0.040 (2) | |
| H6A | 0.0680 | 0.3939 | 0.6757 | 0.060* | |
| H6B | 0.1982 | 0.2342 | 0.7134 | 0.060* | |
| H6C | 0.2804 | 0.4026 | 0.6393 | 0.060* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Sn1 | 0.0409 (4) | 0.0320 (4) | 0.0223 (4) | −0.0033 (3) | −0.0078 (2) | −0.0003 (3) |
| Cl2 | 0.0552 (15) | 0.0464 (15) | 0.0291 (13) | −0.0117 (12) | −0.0202 (11) | 0.0076 (12) |
| Cl3 | 0.0584 (15) | 0.0350 (14) | 0.0407 (14) | −0.0062 (12) | −0.0077 (12) | −0.0090 (12) |
| Cl1 | 0.0482 (13) | 0.0417 (14) | 0.0302 (12) | −0.0063 (11) | 0.0016 (11) | −0.0003 (11) |
| O1 | 0.049 (4) | 0.037 (4) | 0.020 (3) | −0.012 (3) | −0.010 (3) | 0.004 (3) |
| O5 | 0.038 (4) | 0.039 (4) | 0.029 (4) | −0.006 (3) | −0.003 (3) | −0.005 (3) |
| O3 | 0.037 (4) | 0.042 (4) | 0.029 (4) | 0.002 (3) | −0.001 (3) | 0.014 (3) |
| O2 | 0.049 (4) | 0.034 (4) | 0.021 (3) | 0.005 (3) | −0.005 (3) | −0.004 (3) |
| O4 | 0.041 (4) | 0.042 (4) | 0.031 (4) | −0.007 (3) | −0.020 (3) | 0.012 (3) |
| N1 | 0.061 (6) | 0.029 (5) | 0.033 (5) | −0.013 (4) | −0.011 (4) | 0.010 (4) |
| C1 | 0.046 (6) | 0.030 (5) | 0.033 (6) | −0.018 (5) | 0.005 (5) | −0.010 (5) |
| C5 | 0.038 (5) | 0.033 (5) | 0.032 (5) | −0.003 (4) | −0.005 (4) | −0.003 (5) |
| C2 | 0.048 (6) | 0.031 (6) | 0.037 (6) | 0.002 (5) | −0.012 (5) | −0.005 (5) |
| N2 | 0.066 (6) | 0.032 (5) | 0.035 (5) | 0.000 (4) | 0.002 (4) | 0.003 (4) |
| C3 | 0.072 (7) | 0.025 (5) | 0.026 (5) | 0.004 (5) | −0.012 (5) | 0.003 (5) |
| C4 | 0.068 (7) | 0.035 (6) | 0.031 (6) | −0.011 (5) | −0.005 (5) | −0.007 (5) |
| C6 | 0.049 (6) | 0.038 (6) | 0.035 (6) | 0.001 (5) | −0.012 (5) | −0.004 (5) |
Geometric parameters (Å, º)
| Sn1—Cl2 | 2.364 (3) | N1—C5 | 1.304 (13) |
| Sn1—Cl3 | 2.378 (3) | N1—C4 | 1.377 (12) |
| Sn1—Cl1 | 2.359 (2) | C1—C2 | 1.542 (14) |
| Sn1—O1 | 2.097 (6) | C5—N2 | 1.330 (12) |
| Sn1—O5 | 2.124 (7) | C5—C6 | 1.486 (13) |
| Sn1—O2 | 2.111 (6) | N2—H2 | 0.8800 |
| O1—C1 | 1.277 (11) | N2—C3 | 1.375 (12) |
| O5—H5A | 0.8700 | C3—H3 | 0.9500 |
| O5—H5B | 0.8691 | C3—C4 | 1.336 (14) |
| O3—C2 | 1.235 (12) | C4—H4 | 0.9500 |
| O2—C2 | 1.282 (12) | C6—H6A | 0.9800 |
| O4—C1 | 1.243 (12) | C6—H6B | 0.9800 |
| N1—H1 | 0.8800 | C6—H6C | 0.9800 |
| Cl2—Sn1—Cl3 | 95.47 (10) | O4—C1—O1 | 125.3 (9) |
| Cl1—Sn1—Cl2 | 100.40 (9) | O4—C1—C2 | 118.3 (8) |
| Cl1—Sn1—Cl3 | 97.56 (9) | N1—C5—N2 | 105.5 (8) |
| O1—Sn1—Cl2 | 168.07 (19) | N1—C5—C6 | 127.6 (9) |
| O1—Sn1—Cl3 | 88.82 (19) | N2—C5—C6 | 126.9 (9) |
| O1—Sn1—Cl1 | 90.03 (18) | O3—C2—O2 | 125.0 (10) |
| O1—Sn1—O5 | 87.8 (3) | O3—C2—C1 | 119.3 (9) |
| O1—Sn1—O2 | 78.6 (3) | O2—C2—C1 | 115.6 (9) |
| O5—Sn1—Cl2 | 87.18 (19) | C5—N2—H2 | 124.6 |
| O5—Sn1—Cl3 | 175.21 (18) | C5—N2—C3 | 110.9 (8) |
| O5—Sn1—Cl1 | 85.86 (18) | C3—N2—H2 | 124.6 |
| O2—Sn1—Cl2 | 90.23 (19) | N2—C3—H3 | 127.0 |
| O2—Sn1—Cl3 | 90.25 (19) | C4—C3—N2 | 106.0 (9) |
| O2—Sn1—Cl1 | 166.09 (18) | C4—C3—H3 | 127.0 |
| O2—Sn1—O5 | 85.7 (2) | N1—C4—H4 | 126.9 |
| C1—O1—Sn1 | 114.2 (6) | C3—C4—N1 | 106.1 (10) |
| Sn1—O5—H5A | 110.8 | C3—C4—H4 | 126.9 |
| Sn1—O5—H5B | 110.3 | C5—C6—H6A | 109.5 |
| H5A—O5—H5B | 108.2 | C5—C6—H6B | 109.5 |
| C2—O2—Sn1 | 114.3 (6) | C5—C6—H6C | 109.5 |
| C5—N1—H1 | 124.2 | H6A—C6—H6B | 109.5 |
| C5—N1—C4 | 111.5 (9) | H6A—C6—H6C | 109.5 |
| C4—N1—H1 | 124.2 | H6B—C6—H6C | 109.5 |
| O1—C1—C2 | 116.5 (9) | ||
| Sn1—O1—C1—O4 | 170.5 (8) | N1—C5—N2—C3 | −0.9 (12) |
| Sn1—O1—C1—C2 | −8.7 (10) | C5—N1—C4—C3 | 0.6 (13) |
| Sn1—O2—C2—O3 | −172.8 (8) | C5—N2—C3—C4 | 1.3 (13) |
| Sn1—O2—C2—C1 | 4.3 (10) | N2—C3—C4—N1 | −1.1 (13) |
| O1—C1—C2—O3 | −179.7 (8) | C4—N1—C5—N2 | 0.2 (12) |
| O1—C1—C2—O2 | 3.0 (13) | C4—N1—C5—C6 | −179.8 (10) |
| O4—C1—C2—O3 | 1.1 (14) | C6—C5—N2—C3 | 179.1 (10) |
| O4—C1—C2—O2 | −176.2 (8) |
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O5—H5A···O4i | 0.87 | 1.76 | 2.618 (9) | 170 |
| O5—H5B···O3ii | 0.87 | 1.83 | 2.602 (9) | 146 |
| N1—H1···O3 | 0.88 | 2.32 | 3.010 (11) | 136 |
| N1—H1···O4 | 0.88 | 2.31 | 2.974 (10) | 132 |
| N2—H2···Cl2iii | 0.88 | 2.70 | 3.354 (8) | 132 |
| N2—H2···Cl1iv | 0.88 | 2.84 | 3.435 (10) | 126 |
Symmetry codes: (i) −x+1, −y+2, −z+1; (ii) −x, −y+2, −z+1; (iii) x, y−1, z+1; (iv) −x+1, −y+1, −z+1.
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S2056989015005988/wm5136sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015005988/wm5136Isup2.hkl
CCDC reference: 1056053
Additional supporting information: crystallographic information; 3D view; checkCIF report




