In the crystal of the title salt, the 2,6-diamino-4-oxo-1,3-dihydropyrimidin-1-ium cations and the p-toluenesulfonate anions are linked by a series of N—H⋯O hydrogen bonds, forming tunnel-like polymer chains propagating along [010].
Keywords: crystal structure, diaminopyrimidines, triaminopyrimidines, p-toluenesulfonate, hydrogen bonding, N—H⋯O hydrogen bonds, π–π stacking interactions
Abstract
In the title salt, C4H7N4O+·C7H7O3S−, the 2,6-diamino-4-oxo-1,3-dihydropyrimidin-1-ium cation interacts with the sulfonate group of the p-toluenesulfonate anion via a pair of N—H⋯O hydrogen bonds, forming a hetero-synthon R 2 2(8) that mimics the role of a carboxylate. The self-assembled cations form a homo-synthon R 2 1(6) motif which is further linked with the sulfonate anion via N—H⋯O hydrogen bonds to generate an R 3 2(10) ring motif. The three motifs are fused together and extended as supramolecular ribbons along the b-axis direction. Adjacent ribbons are further linked via N—H⋯O hydrogen bonds to form an annulus, with an R 4 4(20) ring motif, resulting in a tunnel-like arrangement propagating along [010]. There are slipped parallel π–π stacking interactions [inter-centroid distance = 3.6539 (7) Å], between the tunnel-like polymer chains, forming slabs parallel to (100).
Chemical context
Di- and tri-aminopyrimidines show various biological and pharmacological properties like tyrosine kinase (Thomas, 1995a
▸,b
▸), dihydrofolate reductase inhibitors (Ayer, 1991 ▸) and are used as antiviral and antiprotozoan agents. 2,6-Diamino-4-hydroxy pyrimidine (DAHP), an inhibitor of guanosine triphosphate cyclohydrolase I, blocks the synthesis of tetrahydrobiopterin which is a known cofactor of inducible nitric oxide synthesis (iNOS) (Bogdan et al., 1995 ▸). The study of hydrogen-bonding patterns involving sulfonate groups in biological systems and metal complexes are of current interest (Gomathi & Muthiah, 2011 ▸; Wang, 2006 ▸). The present report deals with the supramolecular interactions exhibited by the title salt.
Structural commentary
The asymmetric unit of the title salt contains one 2,6-diamino-4-oxo-1,3-dihydropyrimidin-1-ium cation and one p-toluene sulfonate anion (Fig. 1 ▸). The cation is protonated at the N3 position, which is reflected by the slight increase in the C2—N3—C4 bond angle to 123.2 (1)°. The dihedral angle between the cation and anion ring mean planes is 54.04 (6)°.
Figure 1.
A view of the molecular structure of the title molecular salt, with atom labelling. Displacement ellipsoids are drawn at the 50% probability level.
The three C—S—O angles, C7—S1—O3 [106.83 (7)°], C7—S1—O2 [105.89 (7)°] and C7—S1—O4 [106.91 (7)°], and the O—S—O angles, O3—S1—O2 [110.84 (7)°], O2—S1—O4 [111.93 (7)°] and O3—S1—O4 [113.91 (8)°], indicate that the geometry of the sulfonate group is slightly distorted from an ideal tetrahedral geometry.
Supramolecular features
The primary interaction between the cation and anion takes place via a pair of N—H⋯O hydrogen bonds, forming a robust six-membered hetero-synthon,
(8), and here the sulfonate group mimics the role of a carboxylate. This motif links the protonated ring N atom, N3, and the 2-amino N atom, N2, of the cation with the sulfonate atoms O2 and O3 of the anion. Adjacent
(8) ring motifs are connected via an N—H⋯O hydrogen bond by linking the 2-amino N atom, N2 with atom O3i [symmetry code: x, y + 1, z]. The cation undergoes self-association via a pair of bifurcated N—H⋯(O,O) hydrogen bonds, forming a homo-synthon,
(6). This motif involves ring N1 and the 6-amino N atoms and carbonyl atom O1i of the cation (Table 1 ▸). The self-assembled cations extend as a supramolecular chain propagating along [010]. The homo- and hetero-synthons [
(8) and
(6)] are linked by an
(10) ring motif. The three motifs are fused together continuously, forming supramolecular ribbons along [010]. Two such ribbons in adjacent planes are connected via N—H⋯O hydrogen bonds by linking the 6-amino N of the cation and the sulfonate atom O4ii [symmetry code: −x + 1, −y + 1, −z + 1] of the anion, generating an annulus (Su et al., 2007 ▸) with an
(20) graph-set motif (Fig. 2 ▸). This motif extends in the direction of the supramolecular ribbons and generates a tunnel-like architecture along the b-axis direction (Figs. 2 ▸ and 3 ▸).
Table 1. Hydrogen-bond geometry (, ).
| DHA | DH | HA | D A | DHA |
|---|---|---|---|---|
| N1H1O1i | 0.86 | 1.86 | 2.6515(14) | 152 |
| N2H2AO3 | 0.86 | 1.95 | 2.7935(17) | 166 |
| N2H2BO2i | 0.86 | 2.01 | 2.8669(16) | 175 |
| N3H3O2 | 0.86 | 1.92 | 2.7689(14) | 169 |
| N6H6AO4ii | 0.86 | 2.25 | 2.9498(18) | 139 |
| N6H6BO1i | 0.86 | 2.08 | 2.8201(15) | 143 |
Symmetry codes: (i)
; (ii)
.
Figure 2.
A view of the supramolecular tunnel-like architecture built by N—H⋯O hydrogen bonds [dashed lines; see Table 1 ▸ for details; symmetry codes: (i) x, y + 1, z; (ii) −x + 1, −y + 1, −z + 1], in the crystal structure of the title molecular salt.
Figure 3.
A view along the b axis of the crystal packing of the title molecular salt. Hydrogen bonds (see Table 1 ▸ for details) and π–π interactions are shown as dashed lines.
Adjacent tunnels interact by off-set aromatic π–π stacking interactions which are observed between symmetry-related pyrimidine rings of the cations with a centroid–centroid distance Cg⋯Cg
iii of 3.6539 (7) Å [Cg is the centroid of ring N1/C2/N3/C4–C6; the dihedral angle between the ring planes = 1.86 (6)°; perpendicular separation = 3.2501 (5) Å; symmetry code: (iii) −x + 1, y, −z +
]. These interactions result in the formation of slabs parallel to (100); as shown in Fig. 3 ▸.
Database survey
A search of the Cambridge Structural Database (Version 5.36; Groom & Allen, 2014 ▸) revealed the presence of over 700 compounds involving p-toluene sulfonate but only three hits for the 2,6-diamino-4-oxo-1,3-dihydropyrimidin-1-ium cation. These include the sulfate monohydrate (ACEYUD; Muthiah et al., 2004 ▸), the di(methanesulfanyl)amide (ESAQOE; Wijaya et al., 2004 ▸) and the chloride dihydrate (SUZFOJ; Suleiman Gwaram et al., 2010 ▸). In ACEYUD the cation is protonated at the N atom adjacent to the carbonyl group, as in the title compound, while in compounds ESAQOE and SUZFOJ it is the N atom para to the carbonyl group that is protonated. Otherwise, the bond distances in these three compounds are very similar and close to those observed for the title compound.
Synthesis and crystallization
A hot methanolic solution (20 ml) of 2,6-diamino-4-hydroxy pyrimidine (31.5 mg, Aldrich) and p-toluene sulfonic acid (43 mg, Loba chemie) was warmed at 323 K for 30 min over a water bath. The mixture was cooled slowly and kept at room temperature and after three weeks light-yellow needle-shaped crystals were obtained.
Refinement
Crystal data, data collection and structure refinement details are summarized in Table 2 ▸. All H atoms were positioned geometrically and refined using a riding model: N—H = 0.86 Å, C—H = 0.93–0.96 Å with U iso(H) = 1.5U eq(C) for methyl H atoms and 1.2U eq(N,C) for other H atoms.
Table 2. Experimental details.
| Crystal data | |
| Chemical formula | C4H7N4O+C7H7O3S |
| M r | 298.33 |
| Crystal system, space group | Monoclinic, C2/c |
| Temperature (K) | 296 |
| a, b, c () | 30.8628(7), 6.5559(2), 13.1565(3) |
| () | 96.428(1) |
| V (3) | 2645.27(12) |
| Z | 8 |
| Radiation type | Mo K |
| (mm1) | 0.27 |
| Crystal size (mm) | 0.30 0.20 0.20 |
| Data collection | |
| Diffractometer | Bruker Kappa APEXII CCD |
| Absorption correction | Multi-scan (SADABS; Bruker, 2004 ▸) |
| T min, T max | 0.925, 0.949 |
| No. of measured, independent and observed [I > 2(I)] reflections | 14972, 3580, 2986 |
| R int | 0.022 |
| (sin /)max (1) | 0.687 |
| Refinement | |
| R[F 2 > 2(F 2)], wR(F 2), S | 0.037, 0.109, 1.06 |
| No. of reflections | 3580 |
| No. of parameters | 182 |
| H-atom treatment | H-atom parameters constrained |
| max, min (e 3) | 0.31, 0.25 |
Supplementary Material
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015006787/su5107sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015006787/su5107Isup2.hkl
Supporting information file. DOI: 10.1107/S2056989015006787/su5107Isup3.cml
CCDC reference: 1057933
Additional supporting information: crystallographic information; 3D view; checkCIF report
Acknowledgments
The authors thank Dr Babu Varghese and the Sophisticated Analytical Instrument Facility (SAIF), Indian Institute of Technology, Chennai, Tamil Nadu, India, for the data collection.
supplementary crystallographic information
Crystal data
| C4H7N4O+·C7H7O3S− | F(000) = 1248 |
| Mr = 298.33 | Dx = 1.498 Mg m−3 |
| Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -C 2yc | Cell parameters from 3580 reflections |
| a = 30.8628 (7) Å | θ = 2.7–29.3° |
| b = 6.5559 (2) Å | µ = 0.27 mm−1 |
| c = 13.1565 (3) Å | T = 296 K |
| β = 96.428 (1)° | Prism, colourless |
| V = 2645.27 (12) Å3 | 0.30 × 0.20 × 0.20 mm |
| Z = 8 |
Data collection
| Bruker Kappa APEXII CCD diffractometer | 3580 independent reflections |
| Radiation source: fine-focus sealed tube | 2986 reflections with I > 2σ(I) |
| Graphite monochromator | Rint = 0.022 |
| ω and φ scan | θmax = 29.2°, θmin = 2.7° |
| Absorption correction: multi-scan (SADABS; Bruker, 2004) | h = −40→42 |
| Tmin = 0.925, Tmax = 0.949 | k = −9→7 |
| 14972 measured reflections | l = −18→16 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.037 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.109 | H-atom parameters constrained |
| S = 1.06 | w = 1/[σ2(Fo2) + (0.0552P)2 + 1.4509P] where P = (Fo2 + 2Fc2)/3 |
| 3580 reflections | (Δ/σ)max = 0.001 |
| 182 parameters | Δρmax = 0.31 e Å−3 |
| 0 restraints | Δρmin = −0.25 e Å−3 |
Special details
| Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
| Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| S1 | 0.37258 (1) | 0.33503 (6) | 0.60709 (3) | 0.0395 (1) | |
| O2 | 0.41787 (3) | 0.26937 (17) | 0.63677 (10) | 0.0469 (4) | |
| O3 | 0.36871 (4) | 0.55423 (17) | 0.61453 (11) | 0.0559 (4) | |
| O4 | 0.35526 (4) | 0.2530 (2) | 0.50899 (10) | 0.0594 (4) | |
| C7 | 0.34167 (4) | 0.2292 (2) | 0.69886 (12) | 0.0379 (4) | |
| C8 | 0.33328 (5) | 0.3414 (3) | 0.78333 (14) | 0.0508 (5) | |
| C9 | 0.30882 (6) | 0.2558 (4) | 0.85489 (15) | 0.0631 (7) | |
| C10 | 0.29210 (5) | 0.0608 (4) | 0.84233 (15) | 0.0611 (7) | |
| C11 | 0.30171 (6) | −0.0499 (3) | 0.75883 (16) | 0.0595 (6) | |
| C12 | 0.32634 (5) | 0.0315 (3) | 0.68668 (14) | 0.0477 (5) | |
| C13 | 0.26346 (7) | −0.0295 (5) | 0.9167 (2) | 0.0946 (12) | |
| O1 | 0.52384 (3) | 0.28686 (15) | 0.61202 (10) | 0.0461 (4) | |
| N1 | 0.50945 (3) | 0.88937 (16) | 0.62432 (8) | 0.0306 (3) | |
| N2 | 0.43613 (4) | 0.84071 (18) | 0.63472 (10) | 0.0382 (3) | |
| N3 | 0.48173 (3) | 0.56345 (16) | 0.62787 (9) | 0.0314 (3) | |
| N6 | 0.58157 (4) | 0.95420 (18) | 0.60830 (11) | 0.0424 (4) | |
| C2 | 0.47500 (4) | 0.76549 (19) | 0.62867 (9) | 0.0289 (3) | |
| C4 | 0.52230 (4) | 0.4758 (2) | 0.61702 (10) | 0.0321 (3) | |
| C5 | 0.55713 (4) | 0.6088 (2) | 0.61103 (11) | 0.0343 (4) | |
| C6 | 0.55075 (4) | 0.8158 (2) | 0.61406 (10) | 0.0308 (3) | |
| H8 | 0.34390 | 0.47360 | 0.79230 | 0.0610* | |
| H9 | 0.30360 | 0.33110 | 0.91220 | 0.0760* | |
| H11 | 0.29140 | −0.18290 | 0.75060 | 0.0710* | |
| H12 | 0.33250 | −0.04600 | 0.63080 | 0.0570* | |
| H13A | 0.23360 | 0.00590 | 0.89590 | 0.1420* | |
| H13B | 0.27210 | 0.02330 | 0.98400 | 0.1420* | |
| H13C | 0.26650 | −0.17530 | 0.91740 | 0.1420* | |
| H1 | 0.50570 | 1.01900 | 0.62810 | 0.0370* | |
| H2A | 0.41430 | 0.76020 | 0.63830 | 0.0460* | |
| H2B | 0.43230 | 0.97070 | 0.63510 | 0.0460* | |
| H3 | 0.46010 | 0.48390 | 0.63430 | 0.0380* | |
| H5 | 0.58480 | 0.55720 | 0.60500 | 0.0410* | |
| H6A | 0.60780 | 0.91650 | 0.60220 | 0.0510* | |
| H6B | 0.57530 | 1.08180 | 0.61070 | 0.0510* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| S1 | 0.0285 (2) | 0.0340 (2) | 0.0570 (2) | −0.0021 (1) | 0.0095 (1) | −0.0001 (2) |
| O2 | 0.0284 (5) | 0.0346 (5) | 0.0788 (8) | −0.0014 (4) | 0.0105 (5) | 0.0016 (5) |
| O3 | 0.0434 (6) | 0.0332 (6) | 0.0928 (10) | 0.0018 (5) | 0.0154 (6) | 0.0087 (6) |
| O4 | 0.0459 (6) | 0.0783 (9) | 0.0554 (7) | −0.0116 (6) | 0.0117 (5) | −0.0091 (6) |
| C7 | 0.0265 (6) | 0.0356 (7) | 0.0519 (8) | −0.0021 (5) | 0.0053 (5) | 0.0004 (6) |
| C8 | 0.0409 (8) | 0.0524 (10) | 0.0600 (10) | −0.0048 (7) | 0.0094 (7) | −0.0104 (8) |
| C9 | 0.0469 (9) | 0.0889 (15) | 0.0554 (10) | −0.0014 (10) | 0.0140 (8) | −0.0057 (10) |
| C10 | 0.0336 (7) | 0.0877 (15) | 0.0618 (11) | −0.0043 (8) | 0.0039 (7) | 0.0239 (10) |
| C11 | 0.0458 (9) | 0.0518 (11) | 0.0791 (13) | −0.0138 (8) | −0.0004 (8) | 0.0191 (9) |
| C12 | 0.0411 (7) | 0.0379 (8) | 0.0638 (10) | −0.0056 (6) | 0.0047 (7) | −0.0005 (7) |
| C13 | 0.0533 (11) | 0.149 (3) | 0.0824 (15) | −0.0176 (14) | 0.0114 (10) | 0.0509 (16) |
| O1 | 0.0415 (5) | 0.0209 (5) | 0.0767 (8) | 0.0010 (4) | 0.0104 (5) | 0.0001 (5) |
| N1 | 0.0338 (5) | 0.0190 (5) | 0.0395 (6) | −0.0006 (4) | 0.0066 (4) | 0.0008 (4) |
| N2 | 0.0333 (5) | 0.0271 (6) | 0.0552 (7) | 0.0018 (4) | 0.0092 (5) | 0.0027 (5) |
| N3 | 0.0307 (5) | 0.0221 (5) | 0.0417 (6) | −0.0022 (4) | 0.0061 (4) | 0.0018 (4) |
| N6 | 0.0353 (6) | 0.0269 (6) | 0.0665 (8) | −0.0041 (5) | 0.0126 (6) | −0.0005 (5) |
| C2 | 0.0332 (6) | 0.0244 (6) | 0.0293 (6) | −0.0003 (5) | 0.0042 (4) | 0.0014 (4) |
| C4 | 0.0346 (6) | 0.0230 (6) | 0.0388 (6) | 0.0009 (5) | 0.0040 (5) | 0.0010 (5) |
| C5 | 0.0316 (6) | 0.0256 (6) | 0.0462 (7) | 0.0008 (5) | 0.0068 (5) | 0.0001 (5) |
| C6 | 0.0328 (6) | 0.0261 (6) | 0.0338 (6) | −0.0020 (5) | 0.0055 (5) | 0.0008 (5) |
Geometric parameters (Å, º)
| S1—O2 | 1.4728 (10) | C7—C12 | 1.383 (2) |
| S1—O3 | 1.4462 (12) | C7—C8 | 1.381 (2) |
| S1—O4 | 1.4444 (14) | C8—C9 | 1.389 (3) |
| S1—C7 | 1.7628 (15) | C9—C10 | 1.382 (4) |
| O1—C4 | 1.2416 (16) | C10—C13 | 1.511 (3) |
| N1—C6 | 1.3835 (16) | C10—C11 | 1.376 (3) |
| N1—C2 | 1.3442 (16) | C11—C12 | 1.388 (3) |
| N2—C2 | 1.3077 (18) | C8—H8 | 0.9300 |
| N3—C2 | 1.3410 (16) | C9—H9 | 0.9300 |
| N3—C4 | 1.3994 (16) | C11—H11 | 0.9300 |
| N6—C6 | 1.3228 (18) | C12—H12 | 0.9300 |
| N1—H1 | 0.8600 | C13—H13C | 0.9600 |
| N2—H2A | 0.8600 | C13—H13A | 0.9600 |
| N2—H2B | 0.8600 | C13—H13B | 0.9600 |
| N3—H3 | 0.8600 | C4—C5 | 1.3932 (18) |
| N6—H6B | 0.8600 | C5—C6 | 1.3725 (19) |
| N6—H6A | 0.8600 | C5—H5 | 0.9300 |
| S1···H2A | 3.0800 | C5···O4ii | 3.4031 (18) |
| S1···H2Bi | 3.0100 | C6···N2v | 3.2886 (19) |
| S1···H3 | 2.8600 | C6···O1iv | 3.1973 (16) |
| O1···C6i | 3.1973 (16) | C6···C2v | 3.5776 (18) |
| O1···N1i | 2.6515 (14) | C13···O4vi | 3.298 (3) |
| O1···N6i | 2.8201 (15) | C4···H1i | 3.0400 |
| O1···C2ii | 3.1894 (18) | C4···H6Bi | 3.0600 |
| O2···N3 | 2.7689 (14) | C7···H13Avii | 3.1000 |
| O2···N2i | 2.8669 (16) | C12···H13Biii | 3.0100 |
| O3···N2 | 2.7935 (17) | H1···H2B | 2.3000 |
| O4···C5ii | 3.4031 (18) | H1···H6B | 2.2200 |
| O4···N6ii | 2.9498 (18) | H1···C4iv | 3.0400 |
| O4···C13iii | 3.298 (3) | H1···O1iv | 1.8600 |
| O1···H6Bi | 2.0800 | H2A···H3 | 2.3000 |
| O1···H1i | 1.8600 | H2A···S1 | 3.0800 |
| O2···H3 | 1.9200 | H2A···O3 | 1.9500 |
| O2···H2Bi | 2.0100 | H2B···H1 | 2.3000 |
| O3···H12iv | 2.8700 | H2B···S1iv | 3.0100 |
| O3···H3 | 2.8400 | H2B···O2iv | 2.0100 |
| O3···H8 | 2.6000 | H3···S1 | 2.8600 |
| O3···H2A | 1.9500 | H3···H2A | 2.3000 |
| O4···H5ii | 2.8000 | H3···O2 | 1.9200 |
| O4···H13Ciii | 2.9100 | H3···O3 | 2.8400 |
| O4···H6Aii | 2.2500 | H5···O4ii | 2.8000 |
| O4···H12 | 2.6800 | H5···H8v | 2.5100 |
| N1···O1iv | 2.6515 (14) | H5···H6A | 2.4600 |
| N1···C2v | 3.3319 (16) | H6A···O4ii | 2.2500 |
| N2···O3 | 2.7935 (17) | H6A···H5 | 2.4600 |
| N2···O2iv | 2.8669 (16) | H6B···C4iv | 3.0600 |
| N2···C6v | 3.2886 (19) | H6B···H1 | 2.2200 |
| N3···C5ii | 3.4276 (18) | H6B···O1iv | 2.0800 |
| N3···O2 | 2.7689 (14) | H8···H5v | 2.5100 |
| N3···N3v | 3.2844 (17) | H8···O3 | 2.6000 |
| N3···C4v | 3.4212 (18) | H9···H13B | 2.4700 |
| N3···C4ii | 3.2207 (18) | H11···H13C | 2.4100 |
| N6···O1iv | 2.8201 (15) | H12···O4 | 2.6800 |
| N6···O4ii | 2.9498 (18) | H12···H13Biii | 2.5300 |
| C2···N1v | 3.3319 (16) | H12···O3i | 2.8700 |
| C2···C2v | 3.3868 (17) | H13A···C7viii | 3.1000 |
| C2···C6v | 3.5776 (18) | H13B···H9 | 2.4700 |
| C2···O1ii | 3.1894 (18) | H13B···C12vi | 3.0100 |
| C4···N3ii | 3.2207 (18) | H13B···H12vi | 2.5300 |
| C4···C4ii | 3.2446 (18) | H13C···H11 | 2.4100 |
| C4···N3v | 3.4212 (18) | H13C···O4vi | 2.9100 |
| C5···N3ii | 3.4276 (18) | ||
| O2—S1—O3 | 110.84 (7) | C7—C12—C11 | 119.19 (17) |
| O2—S1—O4 | 111.93 (7) | C9—C8—H8 | 120.00 |
| O2—S1—C7 | 105.89 (7) | C7—C8—H8 | 120.00 |
| O3—S1—O4 | 113.91 (8) | C10—C9—H9 | 119.00 |
| O3—S1—C7 | 106.83 (7) | C8—C9—H9 | 119.00 |
| O4—S1—C7 | 106.91 (7) | C10—C11—H11 | 119.00 |
| C2—N1—C6 | 122.36 (11) | C12—C11—H11 | 119.00 |
| C2—N3—C4 | 123.20 (10) | C11—C12—H12 | 120.00 |
| C6—N1—H1 | 119.00 | C7—C12—H12 | 120.00 |
| C2—N1—H1 | 119.00 | C10—C13—H13C | 109.00 |
| C2—N2—H2B | 120.00 | H13B—C13—H13C | 109.00 |
| H2A—N2—H2B | 120.00 | C10—C13—H13A | 109.00 |
| C2—N2—H2A | 120.00 | C10—C13—H13B | 109.00 |
| C4—N3—H3 | 118.00 | H13A—C13—H13C | 109.00 |
| C2—N3—H3 | 118.00 | H13A—C13—H13B | 110.00 |
| C6—N6—H6A | 120.00 | N1—C2—N3 | 118.20 (11) |
| H6A—N6—H6B | 120.00 | N1—C2—N2 | 120.67 (12) |
| C6—N6—H6B | 120.00 | N2—C2—N3 | 121.13 (11) |
| S1—C7—C12 | 119.60 (12) | N3—C4—C5 | 116.98 (11) |
| C8—C7—C12 | 119.99 (15) | O1—C4—C5 | 125.95 (12) |
| S1—C7—C8 | 120.41 (11) | O1—C4—N3 | 117.07 (11) |
| C7—C8—C9 | 119.68 (18) | C4—C5—C6 | 120.20 (12) |
| C8—C9—C10 | 121.11 (19) | N1—C6—N6 | 116.28 (12) |
| C11—C10—C13 | 120.3 (2) | N1—C6—C5 | 118.97 (11) |
| C9—C10—C13 | 121.5 (2) | N6—C6—C5 | 124.76 (12) |
| C9—C10—C11 | 118.19 (18) | C4—C5—H5 | 120.00 |
| C10—C11—C12 | 121.79 (19) | C6—C5—H5 | 120.00 |
| O2—S1—C7—C8 | 94.26 (13) | S1—C7—C12—C11 | −179.44 (13) |
| O2—S1—C7—C12 | −84.77 (13) | S1—C7—C8—C9 | 179.93 (13) |
| O3—S1—C7—C8 | −23.93 (14) | C12—C7—C8—C9 | −1.0 (2) |
| O3—S1—C7—C12 | 157.04 (12) | C8—C7—C12—C11 | 1.5 (2) |
| O4—S1—C7—C8 | −146.24 (13) | C7—C8—C9—C10 | −1.0 (3) |
| O4—S1—C7—C12 | 34.72 (14) | C8—C9—C10—C13 | −176.68 (19) |
| C6—N1—C2—N2 | −177.54 (12) | C8—C9—C10—C11 | 2.4 (3) |
| C6—N1—C2—N3 | 3.24 (18) | C13—C10—C11—C12 | 177.18 (19) |
| C2—N1—C6—N6 | 178.45 (12) | C9—C10—C11—C12 | −2.0 (3) |
| C2—N1—C6—C5 | −1.84 (19) | C10—C11—C12—C7 | 0.0 (3) |
| C2—N3—C4—O1 | −176.29 (13) | O1—C4—C5—C6 | 177.72 (14) |
| C2—N3—C4—C5 | 2.62 (19) | N3—C4—C5—C6 | −1.1 (2) |
| C4—N3—C2—N2 | 177.12 (12) | C4—C5—C6—N6 | −179.57 (14) |
| C4—N3—C2—N1 | −3.67 (18) | C4—C5—C6—N1 | 0.8 (2) |
Symmetry codes: (i) x, y−1, z; (ii) −x+1, −y+1, −z+1; (iii) x, −y, z−1/2; (iv) x, y+1, z; (v) −x+1, y, −z+3/2; (vi) x, −y, z+1/2; (vii) −x+1/2, y+1/2, −z+3/2; (viii) −x+1/2, y−1/2, −z+3/2.
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1···O1iv | 0.86 | 1.86 | 2.6515 (14) | 152 |
| N2—H2A···O3 | 0.86 | 1.95 | 2.7935 (17) | 166 |
| N2—H2B···O2iv | 0.86 | 2.01 | 2.8669 (16) | 175 |
| N3—H3···O2 | 0.86 | 1.92 | 2.7689 (14) | 169 |
| N6—H6A···O4ii | 0.86 | 2.25 | 2.9498 (18) | 139 |
| N6—H6B···O1iv | 0.86 | 2.08 | 2.8201 (15) | 143 |
Symmetry codes: (ii) −x+1, −y+1, −z+1; (iv) x, y+1, z.
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015006787/su5107sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015006787/su5107Isup2.hkl
Supporting information file. DOI: 10.1107/S2056989015006787/su5107Isup3.cml
CCDC reference: 1057933
Additional supporting information: crystallographic information; 3D view; checkCIF report



