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. Author manuscript; available in PMC: 2015 Nov 1.
Published in final edited form as: World Neurosurg. 2013 Aug 30;82(5):684–695. doi: 10.1016/j.wneu.2013.08.029

Mechanisms of Endothelial Cell Attachment, Proliferation, and Differentiation on 4 Types of Platinum-Based Endovascular Coils

Aditya S Pandey 1, James D San Antonio 2, Sankar Addya 3, Saul Surrey 4, Paolo Fortina 3,6, Elisabeth J Van Bockstaele 5, Erol Veznedaroglu 7
PMCID: PMC4427900  NIHMSID: NIHMS680341  PMID: 23994074

Abstract

OBJECTIVE

A subarachnoid hemorrhage is neurologically devastating, with 50% of patients becoming disabled or deceased. Advent of Guglielmi detachable coils in 1995 permitted endovascular treatment of cerebral aneurysms. Coiling is efficacious and safe, but durability needs improvement, as nearly 20% of patients require further invasive intervention secondary to aneurysm recurrence. The aim of this study is to develop an in vitro model of endothelial cell (EC) proliferation and differentiation on four types of platinum-based coils, using gene expression profiling to understand EC biology as they colonize and differentiate on coils.

METHODS

Human umbilical vein ECs were grown in vitro on platinum coil segments. Growth patterns were assessed as a function of coil type. Gene expression profiles for coil attached versus coil unattached ECs were determined using immunohistochemistry and gene array analysis.

RESULTS

ECs showed rapid, robust attachment to all coil types. Some detachment occurred within 24–48 hours. Significant growth of remaining attached cells occurred during the next week, creating a confluence on coils and within coil grooves. Similar growth curve results were obtained with human brain ECs on platinum-based coil surfaces. Differentiation markers in attached cells (α1, α2, β1 integrins) were expressed on immunostaining, whereas microarray gene expression revealed 48 up-regulated and 68 down-regulated genes after 24-hour growth on coils. Major pathways affected as a function of time of colonization on coils and coil type included those involved in regulation of cell cycle and cell signaling.

CONCLUSIONS

We developed an in vitro model for evaluating endothelialization of platinum coils to optimize coil design to support robust EC colonization and differentiation.

Keywords: Cerebral aneurysms, Coils, Endothelial cells, Subarachnoid hemorrhage, Tissue engineering

INTRODUCTION

Thirty-five thousand patients suffer from aneurysmal subarachnoid hemorrhage yearly within the United States. The International Subarachnoid Aneurysm Trial (ISAT) reported a lower probability of death and disability for patients undergoing coiling of cerebral aneurysms as opposed to micro-surgery (15). Although ISAT built the platform for launching endovascular treatment of cerebral aneurysms as a mainstay therapy, the durability of this treatment method remains inferior to that of microsurgery. Based on follow-up cerebral angiography, 10%–30% of all coiled aneurysms will show recurrence (1, 18). Recurrence of coiled aneurysms leads to increased morbidity secondary to retreatments, angiographic follow-up, and the real risk of rerupture.

The goal of endovascular occlusion of aneurysms is to introduce platinum-based coils into the cerebral aneurysm until the entire aneurysm volume is filled with thrombus and coils. Volumetric analysis shows that most aneurysms are only filled 20%–40% with coils, and the rest represents acute thrombus (1). Histopathologic analyses based on autopsy of patients who harbored coiled aneurysms show that within the first 4 weeks, the aneurysm houses organized thrombus, which then develops into minimal fibrous tissue. Endothelial proliferation seems to occur at 3 months after embolization (3, 4, 21). At 12 months after the procedure, coils seem to be embedded in fibrous tissue with endothelialization occurring over the neck of the aneurysm (3, 4, 21). Recurrence takes place when the endothelialization process does not occur across the neck of the aneurysm and thus, the pulsatility is transmitted to the coil/thrombus mass leading to coil compaction as the thrombus dissolves. Our goal is to understand the interaction of platinum coils with endothelial cells (ECs), with the future aim of creating an intra-aneurysmal environment for EC proliferation across the neck of the aneurysm.

MATERIALS AND METHODS

Endovascular Coils

To facilitate growth curves, we purchased the following coils: Guglielmi detachable coils (GDCs) and Matrix coils from Boston Scientific, Natick, Massachusetts, USA; Cerecyte coils from Micrus Endovascular, San Jose, California, USA; and HydroCoils from MicroVention, Tustin, California, USA. Coil fragments measured 1 cm (each was weighed using an analytical balance), and were used for cellular attachment, growth analysis, immunohistochemistry, and gene array analysis.

Human Umbilical Vein EC Isolation

Umbilical cords were obtained from the Labor and Delivery Department, Thomas Jefferson University Hospital, Philadelphia, Pennsylvania, USA. Human umbilical vein ECs (HUVEC) were isolated from the cords using a collagenase digestion protocol, as described previously (9).

Cell Culture

HUVEC were cultured on tissue culture flasks coated with 0.2% gelatin. Cells were fed a complete media consisting of Media 199 (GIBCO, Carlsbad, California, USA), 10% fetal bovine serum (FBS; HyClone, Logan, Utah, USA), 50 μg/mL EC growth supplement, 50 μg/mL heparin sodium salt from porcine intestinal mucosa (Grade I-A; Sigma-Aldrich, St. Louis, Missouri, USA), 1% penicillin-streptomycin (GIBCO), and 0.1% Fungizone (GIBCO). EC growth supplement was isolated from bovine hypothalami, as described previously (12). HUVECs were used through passage 6. Similar growth curve experiments were also performed with human cerebral microvascular ECs (hCMEC/D3) at less than 10 passages (27). These cells were cultured for 2 weeks to reach confluency, at which time they were trypsinized and diluted to 1,000,000 cells/mL for experimentation. Similar cellular media, warming tray, and techniques were used for the growth curve assessment.

EC Seeding of Endovascular Coils

EC were trypsinized from confluent cultures and 1.0 mL of a 1 × 106 cells/mL suspension was placed in a sterile Eppendorf tube. One coil segment (~1 cm) was added to each tube and the weight measured. Samples were then placed in a tissue culture incubator on a rocking platform for 4–6 hours, and were gently rotated to ensure cell contact with the coil. Coils were then removed from the cell suspension and rinsed by dipping them once into a well of a 12-well tissue culture plate containing Hanks balanced salt solution at 2 mL/well. Coils were then placed into complete media in a 12-well tissue culture plate and returned to the tissue culture incubator. Culture medium was replaced every 2 days thereafter.

Measurement of EC Growth on Coils

At various times during culture (typically at days 1, 3, 7, 14, and 28), cells were removed from the coils by trypsinization and counted. Coils were placed in 0.5 mL trypsin/coil for 5–10 minutes; the resultant cell suspension was mixed 1:1 with complete media to neutralize the trypsin. Cells released from the coils were counted using a hemacytometer, and expressed as cells bound/milligram of coil. Micrographs of cell-populated coils were also taken before and after trypsinization using inverted microscopy.

Immunohistochemical Staining of EC-populated Coils

After ECs proliferated on GDCs for 7 days, coil segments and unattached cells that had become confluent within the wells were fixed using 10% buffered formalin. These two populations (attached and unattached cells) were incubated with primary anti-bodies to α1 integrin, α2 integrin, β1 integrin, or platelet EC adhesion molecule overnight at 4°C. Samples were labeled with fluorescein isothiocyanate-conjugated secondary antibodies and imaged using fluorescent microscopy.

Examination of EC Gene Expression by Gene Array Analysis

Total RNA Isolation

DNA-free total RNA of cultured cells was isolated using the RNeasy Micro Kit (Qiagen, Valencia, California, USA) according to manufacturer’s instructions. In brief, 1 × 105 cells from duplicate cultures (control and experimental) were pelleted, lysed in RNA lysis tissue buffer containing 1% (vol/vol) β-mercaptoethanol. DNase-treated RNA was ethanol precipitated and quantified on a NanoDrop ND-1000 spectrophotometer (Thermo Fisher Scientific, Waltham, Massachusetts, USA), followed by RNA quality assessment by analysis on an Agilent 2100 bioanalyzer (Agilent Technologies, Palo Alto, California, USA).

Microarray Methods

Ribo-single-primer-isothermal-amplification-based RNA amplifications and target preparations were performed according to the manufacturer’s instructions (Ovation Biotin System; NuGEN Technologies, San Carlos, California, USA). Briefly, first-strand complementary DNA (cDNA) was synthesized from 50 ng of total RNA using reverse transcription with a unique oligo (dT)/RNA chimeric primer. In the second step, DNA/RNA heteroduplex double-strand cDNA was generated with DNA polymerase. In the third step, SPIA linear isothermal DNA amplification process was performed using DNA/RNA chimeric primer, DNA polymerase, and RNase H in a homogenous isothermal assay that provides efficient amplification of DNA sequence.

Fragmentation and Biotin Labeling

In the first step, DNA amplification products were fragmented by chemical and enzymatic fragmentation that yields single-stranded cDNA products in the 50- to 100-base range. In the second step, fragmented product is labeled by enzymatic attachment of a biotin-labeled nucleotide to the 3-hydroxyl end of the fragmented cDNA.

Hybridization and Bioinformatic Analysis of Messenger RNA Expression Profiling

Fragmented and biotin-labeled target (3.75 μg) in 200 μL of hybridization cocktail was used for each Affymetrix HG U133 Plus 2.0 array (Affymetrix, Santa Clara, California, USA), which contains 56,000 probe sets representing 34,000 well-characterized human genes. Target denaturation was done at 99°C for 2 minutes, and hybridization was performed for 18 hours. Arrays were washed and stained using GeneChip Fluidic Station 450, and hybridization signals were amplified using antibody amplification with goat IgG (Sigma-Aldrich) and anti-streptavidin biotinylated antibody (Vector Laboratories, Burlin-game, California, USA). Chips were scanned on an Affymetrix GeneChip Scanner 3000 using GeneChip Operating Software version 3.0. A flow-chart analysis is shown in Figure 1. Normalization was accomplished using robust multi-array average to arrive at baseline transformation for the median of all samples using GeneSpring GX version 10.0 software (Agilent). The gene list was filtered by removing low expressers (<100 signal value in all four samples). A volcano plot was used to identify differentially expressed genes (DEGs) using unpaired t-test with no multiple testing correction (condition, P = 0.05, and twofold change).

Figure 1.

Figure 1

Phase contrast photomicrographs showing endothelial cells attached to coil at day 1 (A), day 4 (B), and day 7 (C).

Gene Annotation

Expressed and DEG lists were linked to the genome database NetAffx at the NetAffx Analysis Center (http://www.affymetrix.com) using Microsoft Excel and Microsoft Access. Gene ontology functions and pathway analysis were assigned using database for Annotation, Visualization, and Integrated Discovery (DAVID version 2.0; http://david.abcc.ncifcrf.gov/). The DEG list was used to perform biological network and functional analysis using Ingenuity Pathway Analysis (IPA) software version 5.0 (Ingenuity Systems Inc., Redwood City, California, USA).

RESULTS

EC Attachment and Proliferation on Platinum-Based Coils

Upon incubation of ECs with platinum coil segments, anywhere from 2000 to 12,000 cells attached for every milligram of coil segment. The cells appeared to attach as clusters, and during the next 24 hours most cells within the clusters appeared to detach as aggregates. Within the first 24 hours, there was an approximate 20% loss of cells, but during the next 96 hours there was an approximate 60% increase in the number of cells associated with the coils, confirming EC proliferation on platinum coils (Figure 1A, B). This increase in cell numbers continued until days 10–15 when there were 7000–10,000 cells per milligram of coil (Figure 1C). After this time and during the next week, there was a reduction in the number of coil-bound cells (Figure 2A). The same phenomenon was observed for human brain EC growth on platinum-based coil surfaces (Figure 2C).

Figure 2.

Figure 2

Bar graphs illustrating human umbilical vein endothelial cell growth on platinum (A) and bioactive (B) coils. Human brain endothelial cell growth on platinum-based coil surfaces per mg of coil (C). GDC, Guglielmi detachable coil; PGLA, polyglycolic acid.

Cellular Attachment and Proliferation on Coated Coils

GDCs, HydroCoils, Matrix coils, and Cerecyte coils all had similar numbers of ECs attaching during the incubation period (300–850 cells/mg of coil). Within the first 72 hours, 200–400 ECs/mg of coil segment remained. During the next 4 days there was marked cell proliferation on the Cerecyte coils (~1400 cells/mg coil) and HydroCoils (~1750 cells/mg coil); however, cell numbers on the GDCs (600 cells/mg coil) and Matrix coils (100 cells/mg coil) were constant with no evidence of proliferation (Figure 2B). During the next week, cellular proliferation occurred on the Cerecyte coils (~2850 cells/mg coil) and the GDCs (~1600 cells/mg coil), remained stable on the HydroCoils (~1800 cells/mg coil), and showed no evidence of proliferation on the Matrix coil (~500 cells/mg coil).

Immunohistochemistry

Figure 1 shows EC attachment to coil segments, and evidence of cellular proliferation and their colonization within coil crevices. Immunohistochemical staining for EC adhesion/signaling receptors α1 integrin, α2 integrin, β1 integrin, and platelet EC adhesion molecule showed diffuse staining of cells when attached to coil segments, or when grown on tissue culture plastic in the absence of coils (Figure 3).

Figure 3.

Figure 3

Control (left) and experimental (right) immunohistochemical staining for α1 integrin (A), α2 integrin (B), β1 integrin (C), and platelet endothelial cell adhesion molecule (D) showing endothelial cell localization on coils. Control images represent staining of cells attached to the surface of the wells rather than the coil segments.

Microarray Analyses of ECs Grown in Culture with or without a Coil

Transcriptome analyses were performed by genomewide microarray expression profiling to define expressed and DEGs after 24-hour growth of ECs in the presence versus absence of a coil. A flow chart for microarray analysis is shown in Figure 4. Array data reproducibility was documented by comparison of a linear scatter plot of spot intensities at each register on duplicate arrays using RNA derived from two replicate control cultures grown in the absence of a coil (Figure 5; slope =1.0136, R2 =0.9892). When average signal values <100 were excluded, 11,894 probe sets (7929 unique genes) were expressed from duplicate untreated cultures. This represents 21.8% of arrayed probe sets (11,894/54,675) and corresponds to 7929 unique genes. The number of expressed probe sets showed minimal change when comparing control to coil-grown cultures. Many of the highest values were messenger RNAs coding for ribosomal proteins, thymosin beta 10, β-actin, eukaryotic translation elongation factor 1 α1, ferritin light chain, cytochrome c oxidase subunit II, tubulin, α1B, and annexin A2.

Figure 4.

Figure 4

Flow chart analysis of gene expression.

Figure 5.

Figure 5

Scatter plots used to define array reproducibility. (A) Gene expression intensities from microarrays using duplicate control cultures (self versus self-experiment). (B) Log scatter plot (control self-experiment). Signal values are graphed from all probe sets on the two arrays, each hybridized with one of two duplicate untreated sample targets.

Identification of DEGs after 24-Hour Growth of ECs

Using signal intensities >100 in at least one of the four samples and ≥2-fold up or down as the criterion for definition of a DEG, we next performed a volcano plot analysis to compare the two replicate controls against the two cultures grown on the coil (Figure 6, left). Such a plot defines fold change (x-axis) as a function of statistical significance (y-axis). This analysis identified 135 probe sets at a P value of 0.05 (red dots), which were differentially expressed as a result of EC growth on the coil. This included 58 probe sets (48 genes) that were up-regulated and 77 (68 genes) that were down-regulated in response to growth on the coil (Tables 1 and 2). A heat map shows up-regulated and down-regulated genes for duplicate cultures (Figure 6, right). Seventy-one of 77 down-regulated probe sets belong to functional categories. Functional categories include phosphoprotein metabolism [42], cell division [12], cell cycle [15], mitosis [10], DNA replication [4], cell cycle control [3], and metal binding [2]. Kyoto Encyclopedia of Genes and Genomes pathway analysis shows “cell cycle” as the major affected pathway containing four different genes (cyclin A1, cell division control protein 6 homolog, cell division cycle 25C splice variant 3, and extra spindle poles-like 1 protein) designated as down-regulated in ECs in response to growth on the coil.

Figure 6.

Figure 6

(A) Volcano plot showing differentially expressed genes (135 differentially expressed probe set; 116 genes). Relationship between fold-change (>2; magnitude of change; x-axis) and statistical significance (P = 0. 05; y-axis) is shown. (B) Heat map from microarray data reflecting gene expression comparing four different samples: two controls and two coil-treated cultures.

Table 1.

Down-Regulated Gene List

Probe Set ID Gene Symbol Gene Title Fold Change Control Experimental
239331_at Transcribed locus 0.151 139 21
232174_at CDNA: FLJ21635 fis, clone COL08233, highly similar to AF131819 Homo sapiens clone 24838 mRNA sequence 0.245 323 79
222040_at HNRNPA1///LOC728844 Heterogeneous nuclear ribonucleoprotein A1///hypothetical LOC728844 0.288 125 36
230127_at Transcribed locus 0.293 167 49
227165_at C13orf3 Chromosome 13 open reading frame 3 0.331 118 39
209990_s_at GABBR2 Gamma-aminobutyric acid (GABA) B receptor, 2 0.331 136 45
215100_at C6orf105 Chromosome 6 open reading frame 105 0.339 112 38
207526_s_at IL1RL1 Interleukin 1 receptor-like 1 0.341 464 158
204338_s_at RGS4 Regulator of G-protein signaling 4 0.361 108 39
221521_s_at GINS2 GINS complex subunit 2 (Psf2 homolog) 0.370 211 78
205899_at CCNA1 Cyclin A1 0.371 510 189
205681_at BCL2A1 BCL2-related protein A1 0.378 172 65
204817_at ESPL1 Extra spindle pole bodies homolog 1 (S. cerevisiae) 0.380 92 35
201506_at TGFBI Transforming growth factor, beta-induced, 68 kDa 0.391 128 50
205576_at SERPIND1 Serpin peptidase inhibitor, clade D (heparin cofactor), member 1 0.391 391 153
235425_at SGOL2 Shugoshin-like 2 (S. pombe) 0.392 158 62
234066_at IL1RL1 Interleukin 1 receptor-like 1 0.395 233 92
226695_at PRRX1 Paired related homeobox 1 0.403 124 50
235236_at Transcribed locus 0.404 171 69
207601_at SULT1B1 Sulfotransferase family, cytosolic, 1B, member 1 0.404 314 127
225239_at CDNA FLJ26120 fis, clone SYN00419 0.407 280 114
205046_at CENPE Centromere protein E, 312 kDa 0.407 194 79
231403_at TRIO Triple functional domain (PTPRF interacting) 0.407 108 44
220940_at ANKRD36B Ankyrin repeat domain 36B 0.408 179 73
217165_x_at MT1F Metallothionein 1F 0.408 218 89
220651_s_at MCM10 Minichromosome maintenance complex component 10 0.412 102 42
229610_at CKAP2L Cytoskeleton-associated protein 2-like 0.415 224 93
204823_at NAV3 Neuron navigator 3 0.415 426 177
226419_s_at FLJ44342 Hypothetical LOC645460 0.416 377 157
204602_at DKK1 Dickkopf homolog 1 (Xenopus laevis ) 0.422 446 188
213684_s_at PDLIM5 PDZ and LIM domain 5 0.424 125 53
212020_s_at MKI67 Antigen identified by monoclonal antibody Ki-67 0.426 141 60
201195_s_at SLC7A5 Solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 0.429 392 168
230082_at LOC100133660 Hypothetical LOC100133660 0.432 95 41
221436_s_at CDCA3 Cell division cycle associated 3 0.434 143 62
221685_s_at CCDC99 Coiled–coil domain containing 99 0.435 308 134
218009_s_at PRC1 Protein regulator of cytokinesis 1 0.437 421 184
242809_at IL1RL1 Interleukin 1 receptor-like 1 0.439 611 268
218115_at ASF1B ASF1 anti-silencing function 1 homolog B (S. cerevisiae) 0.444 169 75
212021_s_at MKI67 Antigen identified by monoclonal antibody Ki-67 0.447 132 59
220865_s_at PDSS1 Prenyl (decaprenyl) diphosphate synthase, subunit 1 0.448 125 56
203968_s_at CDC6 Cell division cycle 6 homolog (S. cerevisiae) 0.451 122 55
219148_at PBK PDZ binding kinase 0.455 321 146
212023_s_at MKI67 Antigen identified by monoclonal antibody Ki-67 0.455 134 61
203108_at GPRC5A G protein-coupled receptor, family C, group 5, member A 0.459 196 90
204326_x_at MT1X Metallothionein 1X 0.461 206 95
210052_s_at TPX2 TPX2, microtubule-associated, homolog (Xenopus laevis) 0.464 466 216
219557_s_at NRIP3 Nuclear receptor interacting protein 3 0.466 131 61
205167_s_at CDC25C Cell division cycle 25 homolog C (S. pombe) 0.467 120 56
218663_at NCAPG Non-SMC condensin I complex, subunit G 0.467 345 161
203622_s_at PNO1 Partner of NOB1 homolog (S. cerevisiae) 0.470 117 55
218355_at KIF4A Kinesin family member 4A 0.473 510 241
206343_s_at NRG1 Neuregulin 1 0.475 101 48
239202_at CDNA FLJ34848 fis, clone NT2NE2011684, weakly similar to H. sapiens mRNA for plakophilin 2a and b 0.477 239 114
206224_at CST1 Cystatin SN 0.477 1404 670
202016_at MEST Mesoderm specific transcript homolog (mouse) 0.477 220 105
222958_s_at DEPDC1 DEP domain containing 1 0.478 301 144
239973_at Transcribed locus 0.479 119 57
208600_s_at GPR39 G protein-coupled receptor 39 0.480 667 320
226210_s_at MEG3 Maternally expressed 3 0.480 175 84
227211_at PHF19 PHD finger protein 19 0.483 236 114
219918_s_at ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.484 411 199
219493_at SHCBP1 SHC SH2-domain binding protein 1 0.486 144 70
213007_at FANCI Fanconi anemia, complementation group I 0.487 388 189
229070_at C6orf105 Chromosome 6 open reading frame 105 0.487 956 466
203805_s_at FANCA Fanconi anemia, complementation group A 0.489 94 46
203358_s_at EZH2 Enhancer of zeste homolog 2 (Drosophila) 0.491 330 162
223381_at NUF2 NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae) 0.491 234 115
203438_at STC2 Stanniocalcin 2 0.495 186 92
209714_s_at CDKN3 Cyclin-dependent kinase inhibitor 3 (CDK2-associated dual specificity phosphatase) 0.497 290 144
212022_s_at MKI67 Antigen identified by monoclonal antibody Ki-67 0.499 517 258
202533_s_at DHFR Dihydrofolate reductase 0.500 134 67
203755_at BUB1B BUB1 budding uninhibited by benzimidazoles 1 homolog beta (yeast) 0.500 416 208
206653_at POLR3G Polymerase (RNA) III (DNA directed) polypeptide G (32kD) 0.500 326 163
221520_s_at CDCA8 Cell division cycle associated 8 0.500 170 85
205909_at POLE2 Polymerase (DNA directed), epsilon 2 (p59 subunit) 0.502 231 116
216250_s_at LPXN Leupaxin 0.503 163 82

Table 2.

Up-Regulated Gene List

Probe Set ID Gene Symbol Gene Title Fold Change Control Experimental
227235_at CDNA clone IMAGE:5302158 9.887 11 113
222106_at PRND Pprion protein 2 (dublet) 9.071 39 356
202350_s_at MATN2 Matrilin 2 8.284 18 149
209392_at ENPP2 Ectonucleotide pyrophosphatase/phosphodiesterase 2 (autotaxin) 6.284 12 80
214180_at MAN1C1 Mannosidase, alpha, class 1C, member 1 5.427 27 144
217757_at A2M Alpha-2-macroglobulin 5.347 31 161
212344_at SULF1 Sulfatase 1 4.597 60 274
201852_x_at COL3A1 Collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant) 4.504 46 203
215076_s_at COL3A1 Collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant) 4.498 45 197
201150_s_at TIMP3 TIMP metallopeptidase inhibitor 3 (Sorsby fundus dystrophy, pseudoinflammatory) 4.227 43 182
209047_at AQP1 Aquaporin 1 (Colton blood group) 4.158 84 346
201009_s_at TXNIP Thioredoxin interacting protein 3.936 54 211
204904_at GJA4 Gap junction protein, alpha 4, 37kDa 3.92 36 137
203423_at RBP1 Retinol binding protein 1, cellular 3.696 75 274
211161_s_at COL3A1 Collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant) 3.605 159 582
201148_s_at TIMP3 TIMP metallopeptidase inhibitor 3 (Sorsby fundus dystrophy, pseudoinflammatory) 3.387 55 187
209543_s_at CD34 CD34 molecule 3.339 103 343
40687_at GJA4 Gap junction protein, alpha 4, 37 kDa 3.18 42 133
206638_at HTR2B 5-hydroxytryptamine (serotonin) receptor 2B 3.177 104 330
212353_at SULF1 Sulfatase 1 3.177 177 566
201262_s_at BGN Biglycan 3.125 114 345
209583_s_at CD200 CD200 molecule 3.067 33 101
228770_at GPR146 G protein-coupled receptor 146 2.893 75 216
201010_s_at TXNIP Thioredoxin interacting protein 2.792 160 447
205019_s_at VIPR1 Vasoactive intestinal peptide receptor 1 2.722 36 96
202688_at TNFSF10 Tumor necrosis factor (ligand) superfamily, member 10 2.693 197 535
209182_s_at C10orf10 Chromosome 10 open reading frame 10 2.657 189 499
209894_at LEPR Leptin receptor 2.632 48 127
227243_s_at EBF3 Early B-cell factor 3 2.579 41 105
226237_at mRNA full length insert cDNA clone EUROIMAGE 1913076 2.562 139 358
205779_at RAMP2 Receptor (G protein-coupled) activity modifying protein 2 2.546 52 133
217897_at FXYD6 FXYD domain containing ion transport regulator 6 2.529 93 235
238673_at SAMD12 Sterile alpha motif domain containing 12 2.494 61 151
226621_at Transcribed locus 2.458 124 308
216598_s_at CCL2 Chemokine (C-C motif) ligand 2 2.433 545 1326
214329_x_at TNFSF10 Tumor necrosis factor (ligand) superfamily, member 10 2.422 63 151
219304_s_at PDGFD Platelet derived growth factor D 2.421 45 108
202838_at FUCA1 Fucosidase, alpha-L- 1, tissue 2.391 59 141
202291_s_at MGP Matrix Gla protein 2.376 543 1291
212354_at SULF1 Sulfatase 1 2.352 547 1292
230740_at Transcribed locus 2.284 92 210
202947_s_at GYPC Glycophorin C (Gerbich blood group) 2.278 62 142
224818_at SORT1 Sortilin 1 2.275 54 122
227306_at CDNA: FLJ21245 fis, clone COL01184 2.26 44 99
223449_at SEMA6A Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 2.223 145 322
225511_at GPRC5B G protein-coupled receptor, family C, group 5, member B 2.203 113 249
203498_at RCAN2 Regulator of calcineurin 2 2.192 85 186
202023_at EFNA1 Ephrin-A1 2.179 184 398
227040_at NHLRC3 NHL repeat containing 3 2.114 43 91
240890_at LOC643733 Hypothetical LOC643733 2.113 370 782
235887_at Transcribed locus 2.088 44 93
204358_s_at FLRT2 Fibronectin leucine rich transmembrane protein 2 2.079 140 291
218999_at TMEM140 Transmembrane protein 140 2.039 130 265
212951_at GPR116 G protein-coupled receptor 116 2.023 107 217
213894_at THSD7A Thrombospondin, type I, domain containing 7A 2.021 69 140
218966_at MYO5C Myosin VC 2.021 259 526
212325_at LIMCH1 LIM and calponin homology domains 1 2.007 56 113

A functional annotation chart also is given for the 58 up-regulated probe sets demonstrating 50 belong to different functional categories: signal [26], glycoprotein [27], transmembrane [20], membrane [22], secreted [10], extracellular [4], and receptor [9]. KEGG pathway analysis shows “cytokine-cytokine receptor interaction” as the major affected pathway containing four different genes (C-C motif chemokine 2 precursor, oncostatin M receptor, tumor necrosis factor, and leptin receptor) up-regulated in response to growth on the coil.

Biological Network and Functional Analysis

To further refine the functional properties of the DEGs, all 134 genes were analyzed in the IPA tool for network, functional, and pathway analysis. IPA converts a list of genes with accompanying expression information into a set of relevant networks based on the Ingenuity Knowledge Base pathways. A core analysis is performed for the list of genes. The genes were categorized based on molecular function in the IPA software. The identified genes also were mapped to molecular networks in the IPA database and ranked by score. The score reflects the probability that a collection of genes equal to or greater than the number in a network could be achieved by chance alone. The top five (high score) networks are listed in Table 3. Network analysis revealed two important networks related to cellular function and cell-to-cell signaling (Figure 7). Two networks have high scores of 40 and 30, with 20 and 16 focus genes, respectively. Several important genes, such as CCNA1, BUB1B, CDC6, CDC25c, A2M, SULF1, TNFSF10, and TXN1P are related in the network. Further molecular and cellular functional classifications are listed in Table 4, showing that 26 genes are related to cell cycle (4 molecules are up-regulated and 22 genes are down-regulated) and 19 genes are related to cell-to-cell signaling interaction function (14 genes are up-regulated and 5 are down-regulated).

Table 3.

Selected Networks with High Scores for Differentially Expressed Genes

Network Molecules in Network Score Focus Molecules Top Functions
1 A2M, Alp, Ap1, AQP1, BCL2A1, BGN, CCL2, CD34, CDKN3, Collagen type I, Collagen(s), EFNA1, FUCA1, IL1, IL1RL1, KIF4A, LDL, MKI67, Mmp, MT1F, NCAPG, NFkB, PBK, Pdgf, PDGF BB, PDGFD, PRC1, PRRX1, RBP1, SERPIND1, Tgf beta, TGFBI, TIMP3, TXNIP, Vegf 48 23 Connective tissue disorders, infectious disease, inflammatory disease
2 APC, ASF1B, BUB1B, Caspase, CCNA1, CDC6, CDC25C, CENPE, COL3A1, Cyclin A, DHFR, DKK1, E2f, ERK1/2, EZH2, hCG, Histone h3, Histone h4, HNRNPA1, IgG, Insulin, LEPR, Mapk, MCM10, NGF, NRG1, NUF2, P38 MAPK, PHF19, PNO1, Rb, RGS4, Tnf, TNFSF10, TPX2 40 20 Cellular assembly and organization, cell cycle, cell morphology
3 AMBP, AQP1, ASPM, butyric acid, C10ORF10, CCDC99, CDC14B, DEPDC1, EHD1, EHD3, ENPP2, FANCI, FXYD6, GINS2, HMGN2, HNF4A, IFITM2, KNTC1, L-triiodothyronine, LIMCH1, LZTR1, MEG3, MIR124, PELO, PODXL, POLR3G, RCAN2, SULT1B1, TGFBI, THSD7A, TMEM140, TNF, TP53, WTAP, ZNF224 34 18 Gene expression, infection mechanism, cellular development
4 26s Proteasome, Akt, CALCRL, CD200, ERK, FANCA, Focal adhesion kinase, FSH, GABBR2, Gpcr, GPR39, GPR108, GPR116, GPR146, GPRC5A, GPRC5B, GPRC6A, HCRTR2, HTR2B, Interferon alpha, Jnk, LPXN, MT1X, NTSR2, OSMR, P2RY12, PI3K, Rac, RAMP2, RAMP3, Ras, STAT, SULF1, TRIO, VIPR1 30 16 Cell signaling, nucleic acid metabolism, small molecule biochemistry
5 ADAM12, ADCY3, ANKRD36B, ARAP1, ASPM, BDKRB1, C5ORF13, Ca2+, CDCA3, CLTC, EBF3, EHD1, ESPL1, GLI1, GYPC, KDM5B, MAN1C1, MEST, MPP1, NAV3, PDLIM5, PLOD1, PRC1, PRND, PTH1R, RTKN2, SEMA6A, SERPINH1, SH3D19, SHCBP1, SLC2A4, SMAD2, TGFB1, TGFBR3, TUFM 25 14 Cardiovascular system development and function, organismal development, tissue morphology

Figure 7.

Figure 7

Network analysis using Ingenuity Pathway Analysis (IPA). IPA analysis from differentially expressed genes shows predominant networks affected. (A) Cellular assembly and organization, cell cycle, cell morphology (green indicates down-regulated, pink represents up-regulated genes). (B) Cell signaling, nucleic acid metabolism, small molecule biochemistry.

Table 4.

Molecular and Cellular Functions of Differentially Expressed Genes

Functions Number of Molecules
Cellular growth and proliferation 46
Cell cycle 26
Cellular assembly and organization 18
Cellular movement 23
Cell morphology 13
Cell-to-cell signaling and interaction 19

DISCUSSION

Cerebral aneurysmal rupture leads to significant morbidity and mortality (21). Endovascular occlusion of aneurysms is a safe and efficacious treatment modality as supported by the ISAT; however, recurrence of previously coiled aneurysms occurs in 10%–30% of patients (15, 18). Endothelialization across the neck of an aneurysm is essential in preventing such recurrence and associated complications (5, 6, 22). The role of ECs in aneurysmal healing after coiling is essential, as these cells are involved in control of vascular tone, thrombosis, thrombolysis, and platelet activation regulation (2, 7, 28). To evaluate the interaction of ECs with platinum-based coils, we developed an in vitro model by seeding coils with HUVECs and examining their proliferation and gene expression profiles.

We observed cellular attachment to coil segments within hours of incubation. Most adherent cells then detached from the coils as aggregates. During the next 7–14 days, cellular proliferation continued until a confluent population of ECs was observed on coil segments. Cell populations could also be observed within the coil segment grooves—a potentially ideal location, as the cells were protected from shear stress associated with flow within the wells. Intercellular contact on the coil segment as well as EC differentiation could have led to inhibition of cellular proliferation as well as cellular death; thus, the observed decrease in number of attached cells in the third week after attachment (25).

With the introduction of different coil types to the clinical market, we evaluated HUVEC attachment and growth pattern on these modified coil fragments. GDCs are unmodified platinum coils and have been used as the control in these experiments. Matrix coils have a polyglycolic acid (PGLA) coating on the platinum surface as opposed to Cerecyte coils that have a PGLA coating within the platinum core (8, 11). HydroCoils have a hydrogel coating on the platinum surface, which allows for volumetric enlargement when the coils are hydrated within an in vivo system (14, 16). A similar number of cells attached to each coil type; however, the greatest proliferation occurred on Cerecyte coils, followed by HydroCoils and GDCs. Matrix coil segments supported the least proliferation, which could be secondary to the PGLA coating being in direct contact with the HUVECs. HydroCoil enlargement leads to an increase in surface area; thus, more potential space for cellular proliferation without intercellular inhibition, which could explain the larger number of HUVEC cells colonizing this coil type.

Immunohistochemical analysis with antibody labeling for α1, α2, and β1 integrins revealed similar labeling of cells to the coil segments compared with unattached cells (14). Thus, these represent functional HUVECs, as they do not seem to change their cellular membrane integrity when attaching and proliferating on GDC segments (10, 26). In addition, labeling revealed the confluence of cellular proliferation on the coil segments as well as within the crevices of the coils. We analyzed the gene expression of cells attached to the platinum coils versus those grown on tissue culture plastic in the absence of coils, and found that 48 genes were up-regulated whereas 68 genes were down-regulated. The dominating cellular function of down-regulated genes involved cell cycle regulation, whereas genes up-regulated mostly involved cytokine-to-cytokine interaction. The platinum surface most certainly decreased cellular proliferation compared with cells grown in wells. Thus, down-regulation of cell cycle-associated genes was expected and confirmed by our microarray expression studies. It is feasible that EC differentiation could be occurring sooner on the platinum surfaces, leading to a down-regulation of proliferation-associated genes and decreased growth rates on the platinum-based surfaces. Coil segments could also initiate an inflammatory response from the HUVECs, as cytokine-related genes were differentially up-regulated within the attached cellular population (20).

Ozawa et al. (17) and Tamatani et al. (23, 24) reported that canine ECs require extracellular matrix (ECM; fibronectin, laminin, collagen) coating on embolic material for cellular proliferation. They did not observe EC proliferation on uncoated embolic materials. They concluded that ECs require ECM for attachment, growth, and proliferation. Our in vitro model uses HUVECs and achieves cellular attachment, growth, and proliferation on bare platinum as well as PGLA-coated coils. However, it is possible that culture media-derived growth and differentiation factors (e.g., plasma fibronectin) may adhere to the coil surfaces in our model system, creating an ECM-like surface.

Most investigators have reported that collagen type I represents the most ideal substrate for EC proliferation (13). Although collagen provides the appropriate extracellular support for attachment and proliferation, it is also thrombogenic and thus could pose significant thromboembolic risk in the event that coils are coated with this material. In theory, allowing for cellular proliferation on uncoated material would be ideal in reducing the probability of thrombogenicity, as well as allowing for permanent healing within the aneurysm.

We also evaluated the growth of human brain ECs (hCMEC/D3) on different coil types to understand whether brain ECs would have different growth curves on the platinum surfaces compared with HUVECs (27). The overall growth curve is similar to what we observed for HUVECs, as there is exponential growth during the first 7–10 days after cellular attachment. After confluency was reached in the first 10 days, there was a decrease in cell numbers at 2–3 weeks after attachment secondary to cellular growth inhibition, secondary to a lack of surface area. We were not able to detect a statistically significant difference in the number of cells present on the different coil types.

The in vitro model for EC interaction with coils reported here could be used to identify factors to enhance cellular attachment and proliferation in an in vivo situation. In addition, it could serve as the initial step in tissue engineering, as a mechanism for permanent healing within cerebral aneurysms. Tissue engineering requires cellular harvest, attachment to a matrix, and proliferation. The platinum coil could serve as the scaffold, with the goal of attaching smooth muscle cells to endothelium-coated coils with the aim of introducing functional endothelial and smooth muscle cells into the aneurysm lumen (29). Although these cells were able to attach and proliferate when placed on a rocker causing continuous motion, we do aim to modify our in vitro design to introduce calculated flow rates as would be present in an in vivo situation.

Based on our results, we propose a model for the endothelialization of coils: 1) cells attach loosely to the outermost surface of the coil; 2) loosely adherent cells detach; and 3) strongly adherent cells then migrate or compact within flow-protected area of the coil surface (i.e., in the grooves between coil wires). Our results suggest that coils may have the innate capacity to foster EC growth and interactions. These results could be used for development of coils optimized for EC seeding and growth with their surface profile configured with grooves to facilitate attachment and growth of parallel lines of ECs (as has been done for vascular stents) (19). Increasing the surface area-to-volume ratio, as well as decreasing the distance between metallic surfaces within the coil grooves to 10–20 μm (the diameter of ECs), could optimize cellular migration and proliferation. Optimizing EC colonization of coils with biological as well as mechanical modifications should result in endogenous endothelialization within weeks of coil introduction and thus, prevent recurrence as well as need for long-term anticoagulation.

CONCLUSIONS

EC proliferation across the neck of an aneurysm plays a critical role in the formation of permanent healing and prevention of recurrence in previously coiled aneurysms. Our in vitro model of HUVEC and human brain EC attachment and proliferation on coil segments advances toward the goal of rational design of platinum-based coils to support optimal growth and differentiation of ECs, thus potentially enhancing coil efficacy in endovascular surgeries.

Acknowledgments

The authors wish to thank Kari Habursky for technical assistance.

Abbreviations and Acronyms

cDNA

Complementary DNA

DEG

Differentially expressed gene

EC

Endothelial cell

ECM

Extracellular matrix

GDC

Guglielmi detachable coil

HUVEC

Human umbilical vein endothelial cell

IPA

Ingenuity Pathway Analysis

ISAT

International Subarachnoid Aneurysm Trial

PGLA

Polyglycolic acid

Footnotes

Conflict of interest statement: This work was supported in part by a grant from the National Institutes of Health within the Department of Cancer Biology (SA and PF) at the Kimmel Cancer Center, Thomas Jefferson University, the Cardeza Foundation for Hematologic Research at Jefferson Medical College (SS), the Department of Neurosurgery at Thomas Jefferson Hospital, and Covidien, Mansfield, MA.

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