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Acta Crystallographica Section E: Crystallographic Communications logoLink to Acta Crystallographica Section E: Crystallographic Communications
. 2015 Mar 28;71(Pt 4):o267. doi: 10.1107/S2056989015006106

Crystal structure of ethyl N-(1,5-dimethyl-3-oxo-2-phenyl-2,3-di­hydro-1H-pyrazol-4-yl)carbamate

Muhammad Danish a, Muhammad Nawaz Tahir b,*, Uzma Anwar a, Muhammad Asam Raza a
PMCID: PMC4438802  PMID: 26029449

Abstract

In the title compound, C14H17N3O3, the dihedral angle between the benzene ring and the five-membered di­hydro­pyrazole ring is 52.26 (9)°. The ethyl ester group is approximately planar (r.m.s. deviation 0.0568 Å) and subtends an angle 67.73 (8)° to the pyrazole ring. In the crystal, molecules are linked by pairs of N—H⋯O hydrogen bonds, forming inversion dimers with an R 2 2(10) ring motif. Weaker C—H⋯O contacts link these dimers into a three-dimensional network of mol­ecules stacked along the a-axis direction. Offset π–π stacking inter­actions between the benzene rings [centroid-to-centroid distance = 3.8832 (12) Å] further stabilize the crystal packing.

Keywords: crystal structure, di­hydro­pyrazole, ethyl ester, carbamate, hydrogen bonding, π–π stacking inter­actions

Related literature  

For related structures see: Li et al. (2013).graphic file with name e-71-0o267-scheme1.jpg

Experimental  

Crystal data  

  • C14H17N3O3

  • M r = 275.30

  • Monoclinic, Inline graphic

  • a = 8.2100 (4) Å

  • b = 11.4137 (6) Å

  • c = 15.1594 (8) Å

  • β = 93.403 (3)°

  • V = 1418.03 (13) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.09 mm−1

  • T = 296 K

  • 0.38 × 0.34 × 0.20 mm

Data collection  

  • Bruker Kappa APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2005) T min = 0.968, T max = 0.983

  • 11712 measured reflections

  • 3098 independent reflections

  • 2368 reflections with I > 2σ(I)

  • R int = 0.022

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.043

  • wR(F 2) = 0.127

  • S = 1.06

  • 3098 reflections

  • 185 parameters

  • H-atom parameters constrained

  • Δρmax = 0.19 e Å−3

  • Δρmin = −0.17 e Å−3

Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2014/6 (Sheldrick, 2015); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and PLATON (Spek, 2009); software used to prepare material for publication: WinGX (Farrugia, 2012) and PLATON.

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015006106/sj5447sup1.cif

e-71-0o267-sup1.cif (23.6KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015006106/sj5447Isup2.hkl

e-71-0o267-Isup2.hkl (170.2KB, hkl)

Supporting information file. DOI: 10.1107/S2056989015006106/sj5447Isup3.cml

. DOI: 10.1107/S2056989015006106/sj5447fig1.tif

View of the asymmetric unit of title compound with the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are shown as small circles of arbitrary radii.

a . DOI: 10.1107/S2056989015006106/sj5447fig2.tif

The crystal packing of (I), viewed along the a axis, with hydrogen bonds shown as dashed lines.

CCDC reference: 1056157

Additional supporting information: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (, ).

DHA DH HA D A DHA
N3H3AO1i 0.86 1.99 2.8223(17) 164
C10H10AO1ii 0.96 2.56 3.343(2) 139
C11H11BO2iii 0.96 2.66 3.576(2) 161

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

Acknowledgments

The authors acknowledge the provision of funds for purchase of the diffractometer and encouragement by Dr Muhammad Akram Chaudhary, Vice Chancellor, University of Sargodha, Pakistan.

supplementary crystallographic information

S1. Comment

The title compound (I), (Fig. 1) has been synthesized to examine its DNA binding potential and anti-microbial activity. The crystal structures of two closely related compounds, methyl (1,5-dimethyl-3-oxo-2-phenyl-2,3-dihydro-1H- pyrazol-4-yl)carbamate and methyl (1,5-dimethyl-3-oxo-2-phenyl-2,3-dihydro-1H-pyrazol-4-yl)methylcarbamate monohydrate have been reported previously (Li et al., 2013).

In (I), the C1—C6 benzene ring and dihydropyrazol-3-one system, O1/N1/N2/N3/C7—C9 are planar with r.m.s. deviations of 0.0037 and 0.0398 Å, respectively. The dihedral angle between the two systems is 53.64 (5)°. The ethyl ester group, C12/C13/C14/O2/O3, is also planar (r.m.s. deviation 0.0568 Å) and subtends an angle 67.73 (8)° to the pyrazole ring. In the crystal structure classical N3—H3A···O1 hydrogen bonds form inversion dimers (Table 1, Fig. 2) with R22(10) ring motifs. Weaker C10–H10A···O1 and C11–H11B···O2 contacts link these dimers into a three dimensional network of molecules stacked along the a axis direction. Offset π···π stacking interactions between the benzene rings with Cg2···Cg2i = 3.8832 (12) Å further stabilise the crystal packing (Cg2 is the centroid of the C1—C6 benzene ring; i = 2 - x, -y, 1 - z).

S2. Experimental

4-aminoantipyrene (2 g, 9.84 mmole) was dissolved in 50 ml dimethyl formamide and anhydrous potassium carbonate (0.68 g, 4.92 mmole) was added with continuous stirring over 50 minutes. Ethyl chloroformate (1.3 ml) was added drop-wise with stirring over three minutes at 323 K. TLC monitoring showed the reaction to be complete in almost 4 h. The reaction mixture was then cooled to room temperature and transferred to crushed ice leading to the formation of a precipitate. This was separated by filtration and recrystallized from aqueous ethanol to yield (I) as light yellow plates.

Melting point: 477–479 K.

S3. Refinement

The H-atoms were positioned geometrically (N–H = 0.86, C–H = 0.93–0.97 Å) and refined as riding with Uiso(H) = 1.2Ueq(C, N).

Figures

Fig. 1.

Fig. 1.

View of the asymmetric unit of title compound with the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are shown as small circles of arbitrary radii.

Fig. 2.

Fig. 2.

The crystal packing of (I), viewed along the a axis, with hydrogen bonds shown as dashed lines.

Crystal data

C14H17N3O3 F(000) = 584
Mr = 275.30 Dx = 1.290 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
a = 8.2100 (4) Å Cell parameters from 2368 reflections
b = 11.4137 (6) Å θ = 2.2–27.0°
c = 15.1594 (8) Å µ = 0.09 mm1
β = 93.403 (3)° T = 296 K
V = 1418.03 (13) Å3 Plate, light yellow
Z = 4 0.38 × 0.34 × 0.20 mm

Data collection

Bruker Kappa APEXII CCD diffractometer 3098 independent reflections
Radiation source: fine-focus sealed tube 2368 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.022
Detector resolution: 7.80 pixels mm-1 θmax = 27.0°, θmin = 2.2°
ω scans h = −10→10
Absorption correction: multi-scan (SADABS; Bruker, 2005) k = −14→13
Tmin = 0.968, Tmax = 0.983 l = −19→19
11712 measured reflections

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.043 H-atom parameters constrained
wR(F2) = 0.127 w = 1/[σ2(Fo2) + (0.0592P)2 + 0.2848P] where P = (Fo2 + 2Fc2)/3
S = 1.06 (Δ/σ)max < 0.001
3098 reflections Δρmax = 0.19 e Å3
185 parameters Δρmin = −0.17 e Å3
0 restraints Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.027 (3)

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.54493 (13) 0.33953 (9) 0.54004 (6) 0.0503 (3)
O2 0.13321 (16) 0.32771 (12) 0.33957 (11) 0.0819 (5)
O3 0.09391 (13) 0.51504 (10) 0.38192 (8) 0.0617 (3)
N1 0.65770 (15) 0.23072 (11) 0.42996 (8) 0.0458 (3)
N2 0.62265 (16) 0.21412 (12) 0.33892 (8) 0.0510 (3)
N3 0.34531 (15) 0.44615 (11) 0.38501 (8) 0.0480 (3)
H3A 0.3728 0.5172 0.3977 0.058*
C1 0.72550 (18) 0.13738 (13) 0.48290 (10) 0.0472 (4)
C2 0.8305 (2) 0.16528 (17) 0.55395 (11) 0.0592 (4)
H2 0.8595 0.2428 0.5653 0.071*
C3 0.8922 (3) 0.0764 (2) 0.60812 (14) 0.0791 (6)
H3 0.9628 0.0945 0.6565 0.095*
C4 0.8508 (3) −0.0376 (2) 0.59139 (18) 0.0851 (7)
H4 0.8924 −0.0967 0.6285 0.102*
C5 0.7481 (3) −0.06516 (17) 0.52008 (19) 0.0841 (7)
H5 0.7216 −0.1431 0.5085 0.101*
C6 0.6830 (2) 0.02230 (15) 0.46480 (14) 0.0639 (5)
H6 0.6122 0.0038 0.4166 0.077*
C7 0.55368 (17) 0.31534 (12) 0.46080 (9) 0.0406 (3)
C8 0.46691 (17) 0.35940 (13) 0.38352 (9) 0.0430 (3)
C9 0.51590 (19) 0.30017 (14) 0.31216 (10) 0.0487 (4)
C10 0.4694 (3) 0.3221 (2) 0.21696 (12) 0.0755 (6)
H10A 0.4626 0.2489 0.1858 0.113*
H10B 0.5502 0.3709 0.1921 0.113*
H10C 0.3654 0.3607 0.2117 0.113*
C11 0.7583 (2) 0.17664 (16) 0.28711 (12) 0.0621 (5)
H11A 0.7971 0.1016 0.3078 0.093*
H11B 0.8452 0.2329 0.2937 0.093*
H11C 0.7217 0.1709 0.2259 0.093*
C12 0.1866 (2) 0.42031 (14) 0.36699 (11) 0.0528 (4)
C13 −0.0815 (2) 0.4956 (2) 0.37242 (17) 0.0818 (6)
H13A −0.1108 0.4609 0.3152 0.098*
H13B −0.1145 0.4424 0.4179 0.098*
C14 −0.1628 (3) 0.6069 (3) 0.3803 (2) 0.1237 (11)
H14A −0.2786 0.5946 0.3798 0.186*
H14B −0.1381 0.6563 0.3316 0.186*
H14C −0.1259 0.6438 0.4348 0.186*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0619 (7) 0.0475 (6) 0.0425 (6) 0.0067 (5) 0.0099 (5) −0.0044 (4)
O2 0.0552 (7) 0.0589 (9) 0.1307 (13) −0.0026 (6) −0.0010 (8) −0.0187 (8)
O3 0.0453 (6) 0.0558 (7) 0.0849 (8) 0.0115 (5) 0.0113 (6) 0.0010 (6)
N1 0.0493 (7) 0.0440 (7) 0.0445 (7) 0.0090 (6) 0.0050 (5) −0.0052 (5)
N2 0.0517 (7) 0.0558 (8) 0.0458 (7) 0.0106 (6) 0.0067 (6) −0.0112 (6)
N3 0.0459 (7) 0.0395 (7) 0.0586 (8) 0.0054 (5) 0.0037 (6) −0.0030 (5)
C1 0.0421 (7) 0.0439 (8) 0.0568 (9) 0.0089 (6) 0.0134 (6) 0.0019 (7)
C2 0.0558 (9) 0.0613 (11) 0.0607 (10) 0.0102 (8) 0.0043 (8) 0.0035 (8)
C3 0.0691 (12) 0.0960 (17) 0.0724 (12) 0.0247 (12) 0.0054 (10) 0.0187 (11)
C4 0.0744 (14) 0.0786 (15) 0.1049 (17) 0.0307 (12) 0.0268 (13) 0.0369 (13)
C5 0.0725 (13) 0.0453 (11) 0.138 (2) 0.0119 (10) 0.0371 (14) 0.0176 (12)
C6 0.0542 (10) 0.0488 (10) 0.0901 (13) 0.0032 (8) 0.0156 (9) −0.0036 (9)
C7 0.0411 (7) 0.0350 (7) 0.0464 (8) −0.0002 (6) 0.0086 (6) −0.0038 (6)
C8 0.0423 (7) 0.0396 (8) 0.0476 (8) 0.0030 (6) 0.0067 (6) −0.0019 (6)
C9 0.0472 (8) 0.0521 (9) 0.0470 (8) 0.0031 (7) 0.0029 (6) −0.0056 (6)
C10 0.0805 (13) 0.0979 (16) 0.0474 (10) 0.0178 (11) −0.0019 (9) −0.0074 (9)
C11 0.0611 (10) 0.0664 (11) 0.0605 (10) 0.0110 (9) 0.0174 (8) −0.0146 (8)
C12 0.0487 (8) 0.0479 (9) 0.0622 (10) 0.0056 (7) 0.0067 (7) 0.0021 (7)
C13 0.0470 (10) 0.0869 (15) 0.1121 (17) 0.0083 (10) 0.0091 (10) 0.0007 (13)
C14 0.0581 (13) 0.105 (2) 0.211 (3) 0.0252 (14) 0.0337 (17) 0.016 (2)

Geometric parameters (Å, º)

O1—C7 1.2387 (17) C4—H4 0.9300
O2—C12 1.208 (2) C5—C6 1.390 (3)
O3—C12 1.3489 (19) C5—H5 0.9300
O3—C13 1.456 (2) C6—H6 0.9300
N1—C7 1.3886 (18) C7—C8 1.426 (2)
N1—N2 1.4057 (17) C8—C9 1.357 (2)
N1—C1 1.4269 (19) C9—C10 1.492 (2)
N2—C9 1.362 (2) C10—H10A 0.9600
N2—C11 1.4645 (19) C10—H10B 0.9600
N3—C12 1.348 (2) C10—H10C 0.9600
N3—C8 1.4072 (18) C11—H11A 0.9600
N3—H3A 0.8600 C11—H11B 0.9600
C1—C2 1.376 (2) C11—H11C 0.9600
C1—C6 1.383 (2) C13—C14 1.443 (3)
C2—C3 1.382 (3) C13—H13A 0.9700
C2—H2 0.9300 C13—H13B 0.9700
C3—C4 1.365 (3) C14—H14A 0.9600
C3—H3 0.9300 C14—H14B 0.9600
C4—C5 1.367 (4) C14—H14C 0.9600
C12—O3—C13 115.20 (15) C9—C8—C7 108.79 (13)
C7—N1—N2 109.28 (11) N3—C8—C7 123.72 (12)
C7—N1—C1 123.86 (12) C8—C9—N2 109.74 (13)
N2—N1—C1 120.12 (12) C8—C9—C10 128.08 (15)
C9—N2—N1 106.61 (11) N2—C9—C10 122.17 (14)
C9—N2—C11 123.19 (14) C9—C10—H10A 109.5
N1—N2—C11 116.61 (13) C9—C10—H10B 109.5
C12—N3—C8 121.39 (13) H10A—C10—H10B 109.5
C12—N3—H3A 119.3 C9—C10—H10C 109.5
C8—N3—H3A 119.3 H10A—C10—H10C 109.5
C2—C1—C6 120.94 (16) H10B—C10—H10C 109.5
C2—C1—N1 118.21 (15) N2—C11—H11A 109.5
C6—C1—N1 120.81 (15) N2—C11—H11B 109.5
C1—C2—C3 119.05 (19) H11A—C11—H11B 109.5
C1—C2—H2 120.5 N2—C11—H11C 109.5
C3—C2—H2 120.5 H11A—C11—H11C 109.5
C4—C3—C2 120.7 (2) H11B—C11—H11C 109.5
C4—C3—H3 119.6 O2—C12—N3 125.98 (15)
C2—C3—H3 119.6 O2—C12—O3 124.21 (15)
C3—C4—C5 120.1 (2) N3—C12—O3 109.79 (14)
C3—C4—H4 120.0 C14—C13—O3 108.53 (19)
C5—C4—H4 120.0 C14—C13—H13A 110.0
C4—C5—C6 120.6 (2) O3—C13—H13A 110.0
C4—C5—H5 119.7 C14—C13—H13B 110.0
C6—C5—H5 119.7 O3—C13—H13B 110.0
C1—C6—C5 118.6 (2) H13A—C13—H13B 108.4
C1—C6—H6 120.7 C13—C14—H14A 109.5
C5—C6—H6 120.7 C13—C14—H14B 109.5
O1—C7—N1 123.62 (13) H14A—C14—H14B 109.5
O1—C7—C8 131.54 (13) C13—C14—H14C 109.5
N1—C7—C8 104.82 (12) H14A—C14—H14C 109.5
C9—C8—N3 127.41 (14) H14B—C14—H14C 109.5
C7—N1—N2—C9 9.01 (16) C12—N3—C8—C9 67.6 (2)
C1—N1—N2—C9 161.31 (13) C12—N3—C8—C7 −108.89 (18)
C7—N1—N2—C11 151.05 (14) O1—C7—C8—C9 −177.01 (16)
C1—N1—N2—C11 −56.66 (19) N1—C7—C8—C9 1.68 (16)
C7—N1—C1—C2 −64.2 (2) O1—C7—C8—N3 0.0 (3)
N2—N1—C1—C2 147.71 (14) N1—C7—C8—N3 178.73 (13)
C7—N1—C1—C6 113.91 (17) N3—C8—C9—N2 −172.97 (14)
N2—N1—C1—C6 −34.2 (2) C7—C8—C9—N2 3.95 (18)
C6—C1—C2—C3 −0.7 (2) N3—C8—C9—C10 8.5 (3)
N1—C1—C2—C3 177.40 (15) C7—C8—C9—C10 −174.57 (18)
C1—C2—C3—C4 0.4 (3) N1—N2—C9—C8 −7.90 (17)
C2—C3—C4—C5 0.5 (3) C11—N2—C9—C8 −146.82 (15)
C3—C4—C5—C6 −1.0 (3) N1—N2—C9—C10 170.73 (16)
C2—C1—C6—C5 0.2 (2) C11—N2—C9—C10 31.8 (3)
N1—C1—C6—C5 −177.87 (15) C8—N3—C12—O2 −8.1 (3)
C4—C5—C6—C1 0.7 (3) C8—N3—C12—O3 173.51 (13)
N2—N1—C7—O1 172.30 (14) C13—O3—C12—O2 6.8 (3)
C1—N1—C7—O1 21.3 (2) C13—O3—C12—N3 −174.78 (15)
N2—N1—C7—C8 −6.52 (16) C12—O3—C13—C14 −173.5 (2)
C1—N1—C7—C8 −157.55 (14)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
N3—H3A···O1i 0.86 1.99 2.8223 (17) 164
C10—H10A···O1ii 0.96 2.56 3.343 (2) 139
C11—H11B···O2iii 0.96 2.66 3.576 (2) 161

Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x, −y+1/2, z−1/2; (iii) x+1, y, z.

Footnotes

Supporting information for this paper is available from the IUCr electronic archives (Reference: SJ5447).

References

  1. Bruker (2005). SADABS. Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Bruker (2007). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854.
  4. Li, Y., Liu, Y., Wang, H., Xiong, X., Wei, P. & Li, F. (2013). Molecules, 18, 877–893. [DOI] [PMC free article] [PubMed]
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  6. Sheldrick, G. M. (2015). Acta Cryst. C71, 3–8.
  7. Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015006106/sj5447sup1.cif

e-71-0o267-sup1.cif (23.6KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015006106/sj5447Isup2.hkl

e-71-0o267-Isup2.hkl (170.2KB, hkl)

Supporting information file. DOI: 10.1107/S2056989015006106/sj5447Isup3.cml

. DOI: 10.1107/S2056989015006106/sj5447fig1.tif

View of the asymmetric unit of title compound with the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are shown as small circles of arbitrary radii.

a . DOI: 10.1107/S2056989015006106/sj5447fig2.tif

The crystal packing of (I), viewed along the a axis, with hydrogen bonds shown as dashed lines.

CCDC reference: 1056157

Additional supporting information: crystallographic information; 3D view; checkCIF report


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