Table 2.

Number of loci assembled from SSR containing samples

Accession number	Organism	Number of raw reads	Number of HighSSR loci	Number of Newbler loci
121	Arabidopsis thaliana	2140	65	3
122	Arabidopsis thaliana	5349	257	39
123	Arabidopsis thaliana	2655	55	10
124	Arabidopsis thaliana	2125	62	3
65	Arabidopsis thaliana	1897	65	7
81	Aedes aegypti	6690	104	103
EP146	Cryphonectria parasitica	2241	51	6
EP155	Cryphonectria parasitica	3775	141	24

HighSSR reconstructs more loci than Roche gsAssembler (Newbler).