Table 2.
Accession number | Organism | Number of raw reads | Number of HighSSR loci | Number of Newbler loci |
---|---|---|---|---|
121 | Arabidopsis thaliana | 2140 | 65 | 3 |
122 | Arabidopsis thaliana | 5349 | 257 | 39 |
123 | Arabidopsis thaliana | 2655 | 55 | 10 |
124 | Arabidopsis thaliana | 2125 | 62 | 3 |
65 | Arabidopsis thaliana | 1897 | 65 | 7 |
81 | Aedes aegypti | 6690 | 104 | 103 |
EP146 | Cryphonectria parasitica | 2241 | 51 | 6 |
EP155 | Cryphonectria parasitica | 3775 | 141 | 24 |
HighSSR reconstructs more loci than Roche gsAssembler (Newbler).