Abstract
Ancient human mobility at the individual level is conventionally studied by the diverse application of suitable techniques (e.g. aDNA, radiogenic strontium isotopes, as well as oxygen and lead isotopes) to either hard and/or soft tissues. However, the limited preservation of coexisting hard and soft human tissues hampers the possibilities of investigating high-resolution diachronic mobility periods in the life of a single individual. Here, we present the results of a multidisciplinary study of an exceptionally well preserved circa 3.400-year old Danish Bronze Age female find, known as the Egtved Girl. We applied biomolecular, biochemical and geochemical analyses to reconstruct her mobility and diet. We demonstrate that she originated from a place outside present day Denmark (the island of Bornholm excluded), and that she travelled back and forth over large distances during the final months of her life, while consuming a terrestrial diet with intervals of reduced protein intake. We also provide evidence that all her garments were made of non-locally produced wool. Our study advocates the huge potential of combining biomolecular and biogeochemical provenance tracer analyses to hard and soft tissues of a single ancient individual for the reconstruction of high-resolution human mobility.
Recent advances in tracing techniques at the individual level provide us with methodologies to map individual mobility during different life stages1,2,3,4,5,6,7,8,9,10,11,12,13,14. However, the limited preservation of coexisting hard and soft human tissues often impedes the diachronic investigation of a single individual.
Here we investigate the remarkable remains of the iconic Egtved Girl, who belongs to an impressive group of Bronze Age oak coffin burials from Denmark that were placed in monumental elite burial barrows dated to 1500-1100 BC15. Excavations in 1921, close to the village of Egtved in Denmark (Fig. 1), revealed the partially preserved remains of a high status, fully dressed female of approximately 16 to 18 years of age (Fig. 2). Dendrochronological analysis indicates that she was buried in an oak coffin approximately 3,400 years ago16,17. Hair, tooth enamel, nails, and parts of the brain and skin are still preserved, but no bones survived, most likely due to their dissolution in the partially acidic waterlogged environment prevailing within the oak coffin. A small container with some cremated skeletal remains of a 5 to 6-year-old child was placed by her head.
Her extremely well preserved costume consists of several textiles including a short corded skirt, a short blouse (Supplementary Table S1) and a disc-shaped bronze belt plate (Fig. 2) symbolizing the sun, which has been interpreted as belonging to a priestess of the Nordic sun worshipping cult15. Hence, the large variation of preserved hard and soft tissues, together with a rich assemblage of different grave goods provides a unique opportunity to investigate mobility at the individual level.
Results
Hard human tissues
To trace the Egtved Girl’s origin, we performed a strontium isotope analysis of enamel from the left mandibular first molar tooth. With the exception of the third molar, tooth enamel mineralizes during early childhood (e.g. the 1st molar mineralizes between peri-natal to 3 to 4 years of age) and it does not remodel thereafter, hence carrying childhood information on geographic origin6 (Supplementary Information). The Egtved Girl’s tooth enamel yielded a 87Sr/86Sr value of 0.71187 (± 0.0002; 2σ; Table 1). Similarly, we measured the strontium isotope signature of the associated child’s compact part of the occipital bone, the pars petrosa which was recently shown to be a valuable archive preserving origin information5 (Supplementary Information). The occipital bone yielded an 87Sr/86Sr value of 0.71190 (± 0.0002; 2σ; Table 1), a value which is indistinguishable from the Egtved Girl’s tooth enamel. Studies aimed at delineating the range of bioavailable strontium isotope compositions characteristic for present day Denmark (excluding the island of Bornholm and hereafter referred to as “Denmark”) resulted in a baseline range defined by 87Sr/86Sr values of 0.708 to 0.71118,19,20,21 (Supplementary Information). Bioavailable strontium from the Egtved burial site itself is defined by isotopic compositions which lie in the lower end of this scale with 87Sr/86Sr values ranging from 0.70852 to 0.70874 (Table 1). Hence, comparing the strontium isotope results from the Egtved Girl and accompanying child with the Danish baseline, it implies that both individuals originated from outside present day Denmark (Fig.1).
Table 1. Strontium isotope results from human remains of the Egtved Girl (tooth, hair and nail), textiles, oxhide, child bone and soil leachates.
Sample | Sample description | material | 87Sr/86Sr | 2 SE |
---|---|---|---|---|
Local soils from the Egtved burial site (local baseline) | ||||
1 | Soil from Egtved | Soil leachate | 0.70852 | 0.00005 |
2 | Soil from Egtved | Soil leachate | 0.70874 | 0.00002 |
Human remains (Egtved Girl and child) | ||||
ad B11831-50 | Tooth, M1 | Tooth enamel | 0.71187 | 0.00002 |
ad B11821-50 | Nail, thumb left side, oldest part | Nail | 0.71235 | 0.00003 |
ad B11821-50 | Nail, thumb left side, middle part | Nail | 0.71240 | 0.00002 |
ad B11821-50 | Nail, thumb left side, youngest part | Nail | 0.71235 | 0.00003 |
11850 (segment 1) | Scalp hair, nearest the roots/skull, 4 cm long | Scalp hair | 0.71229 | 0.00002 |
11850 (segment 2) | Scalp hair, middle part, 4 cm long | Scalp hair | 0.71028 | 0.00003 |
11850 (segment 3) | Scalp hair, middle part, 5 cm long | Scalp hair | 0.71086 | 0.00004 |
11850 (segment 4) | Scalp hair, tip ends, 10 cm long | Scalp hair | 0.71255 | 0.00003 |
Cremated remains of child | pars petrosa | 0.71190 | 0.00002 | |
Textile and oxhide samples from within the oak coffin | ||||
B11834 | Blouse (warp) | Wool | 0.71234 | 0.00003 |
B11836 | Corded skirt (weft) | Wool | 0.71168 | 0.00003 |
B11849 | Bundle (weft) | Wool | 0.71551 | 0.00004 |
B11835 | Belt (weft) | Wool | 0.71277 | 0.00004 |
B11838 | Foot wrapper, left foot (warp) | Wool | 0.71319 | 0.00004 |
B11839 | Foot wrapper, right foot (warp) | Wool | 0.71530 | 0.00003 |
B11846 | Oxhide hair | Hair/Fur | 0.71324 | 0.00004 |
B11833 | Blanket (light weft) | Wool | 0.71252 | 0.00005 |
B11833 | Blanket (dark weft) | Wool | 0.71372 | 0.00003 |
B11833 | Blanket (warp) | Wool | 0.71399 | 0.00003 |
ad 11847a | Oxtail hair attached to wool cord | Oxtail Hair | 0.70982 | 0.00002 |
ad 11847a | Oxtail hair detached from wool cord | Oxtail Hair | 0.71003 | 0.00003 |
ad 11847a | Wool cord | Wool | 0.71044 | 0.00004 |
Human soft tissues
To trace the Egtved Girl’s mobility during the final months of her life, we divided her 23-cm long scalp hair into 4 segments covering a total growth period of, at least, 23 months prior to death (Fig. 3 and Supplementary Information). The oldest period represented by the hair (segment 4, Table 1) which corresponds to, at least, 23 to 13 months prior to death, is characterized by an elevated strontium isotope signature (87Sr/86Sr = 0.71255). The middle segments 2 and 3 represent a period of, at least, 9 months, and have similar lower strontium isotope signatures (87Sr/86Sr = 0.71028 to 0.71086). These two middle segment values are compatible with bioavailable signatures characteristic for Denmark18,19,21. However, the youngest scalp hair segment 1, corresponding to, at least, the final 4 to 6 months of the Egtved Girl’s life, again reveals an elevated strontium isotope signature (87Sr/86Sr = 0.71229) similar to that measured in the oldest part of the hair. Finally, data of the three segments from one of her fingernails (87Sr/86Sr = 0.71235 to 0.71240) corroborate with the youngest hair segment signature, which together cover the same final 4 to 6 months of her life.
Stable isotope signatures (δ15N = 8.6‰; δ13C = −21.6‰) of a c. 6-cm-long scalp hair corresponding to the same period as the youngest scalp hair segment analyzed for its strontium isotope composition indicate a terrestrial diet (Supplementary Table S3, Supplementary Fig. S3 and Supplementary Information). The partial sigmoidal curve defined by δ13C and δ15N could be suggestive of a seasonal diet variation, although the variance in nitrogen isotopes too, may potentially be interpreted as resulting from physiologically-related influences (Supplementary Fig. S3). Additionally, micro-morphological investigations of several scalp hairs reveal marked constrictions along shafts which may reflect periods of reduction/availability of protein22 (Supplementary Fig. S5 and Supplementary Information).
DNA was extracted from the Egtved Girl’s scalp hair, and using high throughput sequencing technology we obtained >28 million DNA sequences (Supplementary Table S2 and Supplementary Fig. S2) which we intended to use for elucidating population affinity and phenotypic characters (Supplementary Information). However, the proportion of non-duplicated sequences identified as human was extremely small (0.04% and 0.13%, respectively in two extracts) and did not exhibit the molecular characteristics expected for ancient DNA with increased levels of cytosine deamination damage towards the termini. We therefore conclude that there is minor, if any, retrievable ancient human DNA preserved in the hair sample, most likely due to the acidic pH of the burial environment, combined with years of exhibition23.
Garment fibres
The measurements of the wool fibres indicate extensive selection and processing (Supplementary Fig. S6, Supplementary Table S4 and Supplementary Information), indicative of high quality textiles. The strontium isotope compositions from the animal fibres from the textiles and the underlying oxhide reveal a large range from 87Sr/86Sr = 0.71168 to 0.71551 (Table 1, Supplementary Table S1 and Supplementary Information), revealing that her outfit was made of raw materials gathered from outside Denmark. Only the raw materials from a wool cord placed in the container with the cremated remains of the child (ad 11847a, Table 1) yielded strontium isotope signatures that could imply local origin (87Sr/86Sr = 0.70982 to 0.71044).
Discussion
To map the mobility patterns of the Egtved Girl we compare our strontium isotope results with strontium isoscapes from areas adjacent to Denmark21,24,25,26,27,28,29,30 and combine this information with the archaeological record. As depicted in Fig. 1, several target areas/regions are potential provenance candidates (i.e. with 87Sr/86Sr values >0.711), however, the nearest areas lie several hundred kilometres away from the burial site. Furthermore, given the wide range of strontium isotopic compositions from this study (especially obvious in the textiles, Table 1), we focus on regions with a geological background that accounts for these variations. The archaeological record from this period reveals distribution patterns of artefacts spreading from areas in southern Germany towards the north into southern Scandinavia (Supplementary Fig. S1), and suggests inter-chief alliances through intermarriage with elite foreign women15. Southwestern Germany, and in particular the Black Forest (Fig. 1) and adjacent areas, are characterized by a Palaeozoic granite-gneiss core overlain by Triassic sediments with bioavailable strontium isotope signatures that overlap with the wide range of values presented here26. Thus, with the support of archaeological evidence, we propose, that the Egtved Girl, the child, and the garments, may all originate from an area around the Black Forest in southwestern Germany. However, the strontium isotope results could also match other parts of Europe with similar isotopic compositions of bioavailable strontium (Fig. 1)21,24,25,26,27,28,29,30. Regardless of the difficulties in determining her exact provenance, our results point to a high level of mobility especially during the last two years of the Egtved Girl’s life. During this period she consumed a terrestrial diet but experienced periods of poor protein intake while she was moving back and forth from a place outside Denmark to an area characterized by bioavailable strontium with a less radiogenic signature, such as typical of northern Germany, and Denmark. The strontium isotopic signatures in her fingernail and most recent hair segment imply that she traveled from a place distant to Egtved shortly prior to her death.
Our study provides evidence for long-distance and periodically rapid mobility. Our findings compel us to rethink European Bronze Age mobility as highly dynamic, where individuals moved quickly, over long distances in relatively brief periods of time.
Methods
We conducted a multidisciplinary study of the various hard and soft human tissues, as well as well-preserved wool textile and oxhide fibres from the Bronze Age grave find of the Egtved Girl from Denmark, and applied state-of-the-art biomolecular, biochemical and geochemical analyses and techniques to reconstruct high-resolution mobility patterns and diet.
Pre-analytical cleaning and extraction of strontium from the tooth enamel, the pars petrosa, fingernail segments, scalp hair, wool textiles fibres, and oxhide hair fibres followed appropriate procedures according to tissue type (see Supplementary Information for detailed descriptions)1,2,3,5,6,8. Thermal ionization mass spectrometry was used to determine the Sr isotope ratios. Samples were dissolved in 2.5 μl of a Ta2O5-H3PO4-HF activator solution and directly loaded onto previously outgassed 99.98% single rhenium filaments. Samples were measured at 1250-1300 °C in dynamic multi-collection mode on a VG Sector 54 IT mass spectrometer equipped with eight faraday detectors (Institute of Geoscience and Natural Resource Management, University of Copenhagen). Five nanogram loads of the NBS 987 Sr standard yielded 87Sr/86Sr = 0.710236 +/−0.000010 (n = 10, 2σ).
Stable isotope (δ15N and δ13C) analyses of the human scalp hair samples were prepared according to standard protocols at the University of Bradford stable light isotope facility. Adherent soil and exogenous organic deposits were removed (see Supplementary Information) and fibres were carefully orientated and aligned relative to the proximal end and to one another, so that fibre segments could be weighed into tin capsules and analyzed for a diachronic picture of change. Prepared hair samples were combusted in a Europa Scientific Geo 20/20 isotope ratio mass spectrometer coupled to a Roboprep elemental analyzer. Isotopic concentrations for each element are expressed in relation to international standards so that the relative difference between the sample isotope ratio and that of the standard is expressed by use of the δ notation, with units expressed as per mil (‰). Carbon is measured relative to CO2 prepared from a Cretaceous belemnite, from the Peedee Formation, South Carolina, whereas atmospheric N2 is used as the standard for nitrogen.
DNA was extracted utilizing phenol-chloroform combined with MinElute columns (Qiagen) as described previously7. Following extraction, 20 μl of DNA extract was built into a blunt-end library using the NEBNext DNA Sample Prep Master Mix Set 2 (E6070) and Illumina specific adapters (details in Supplementary Information). The DNA libraries were profiled on an Agilent Bioanalyzer 2100, pooled with other indexed libraries (different projects), and shot-gun sequenced (100 bp, single read) in two different sequencing runs on Illumina HiSeq 2000 platforms at the National High Throughput DNA Sequencing Centre, University of Copenhagen. The sequences were base called and sorted bioinformatically by index. Adapter sequences were trimmed off and reads shorter than 30 bp were removed using AdapterRemoval v.1.5.231. Mapping against the human reference genome (hg19, build 37) was conducted with BWA v. 0.7.532 with seeding disabled (-l 1000). Duplicates were removed from the bam file using SAMtools v. 0.1.1833 and only reads with mapping quality ≥25 were retained. See Supplementary Information for further details of DNA extraction, library build, amplification, sequencing and bioinformatics. Morphological investigations of scalp hair from the Egtved Girl were made by mounting hair fibres in a permanent mounting medium (Safe-T-Mount; R.I. 1.52) on conventional glass microscope slides and 0.17 mm thick cover slips. Microscopic investigations were performed with an Olympus compound transmitted light microscope, equipped with objectives ranging from 40-400x magnification.
Microscopic investigations and measurements of the diameter of the individual wool fibres sampled from the textile yarns were performed with a Zeiss Primo Star iLed transmitted light microscope with objectives ranging from 40-400x magnification, and images were captured with an AxioCam ERc5s digital camera. Fibre samples were mounted in liquid paraffin between conventional glass microscope slides and cover slips. A minimum of 100 fibres from each yarn sample were measured for their thicknesses on the photographs using the camera software.
Author Contributions
Author KMF initiated the multidisciplinarity of the project. K.M.F., R.F., UM, M.E.A., S.T., A.W., K.K., I.S., M.L.N. and E.W. were responsible for writing the main manuscript text. KMF, MEA, AW, IS, ST and RF were responsible for conducting and interpreting the data, UM and KK were responsible for the archaeological context. KMF and RF performed all the strontium isotope analyses (scalp hair, tooth enamel, cremated bone, fingernail, wool textile fibres, soil and water), IS performed the microscopy investigations of the wool fibres and of scalp hair MEA performed the DNA analyses, AW and LC performed the stable isotope analyses and ST performed the morphological investigations. All authors reviewed the manuscript.
Additional Information
How to cite this article: Frei, K.M. et al. Tracing the dynamic life story of a Bronze Age Female. Sci. Rep. 5, 10431; doi: 10.1038/srep10431 (2015).
Supplementary Material
Acknowledgments
We would like to thank Cristina de Olsen, Toby Leeper, Poul Otto Nielsen, Charlotte Primeau, Per Kristian Madsen, Jesper Stub Johnsen, Flemming Kaul, Morten Rasmussen, Anna-Sapfo Malaspinas, Andrew Gledhill, and Niels Lynnerup for various help in the lab as well as for comments and access to the archaeological material. We also thank Marie Louise Andersson for graphics, Roberto Fortuna for the Egtved Girl photograph and Cherine Munkholt for revision of English usage. This research has been possible through the support of The Danish National Research Foundation (DNRF 64), The ERC agreement no. 269442 (The Rise), the Carlsberg Foundation ref. nr. 2013-01-0280 to KMF and L’Oréal Denmark-UNESCO (For Women in Science Award to KMF).
References
- Frei K. M. et al. Provenance of ancient textiles- a pilot study evaluating the strontium isotope system in wool. Archaeometry 51, 252–276 (2009). [Google Scholar]
- Frei K. M., Vanden Berghe I., Frei R., Mannering U. & Lyngstrøm H. Removal of organic dyes from wool - implications for ancient textiles provenance studies. Journal of Archaeological Science 37, 2136–2145 (2010). [Google Scholar]
- Frei K. M. Provenance of archaeological wool textiles: new case studies. Open Journal of Archaeometry 2, 10.4081/arc.2014.5239 (2014). [DOI] [Google Scholar]
- Font L. et al. Strontium and lead isotope ratios in human hair: investigating a potential tool for determining recent human geographical movements. Journal of Analytical Atomic Spectrometry 27, 719–732, 10.1039/c2ja10361c (2012). [DOI] [Google Scholar]
- Harvig L., Frei K. M., Price T. D. & Lynnerup N. Strontium Isotope Signals in Cremated Petrous Portions as Indicator for Childhood Origin. PLoS One 9, e101603, 10.1371/journal.pone.0101603 (2014). [DOI] [PMC free article] [PubMed] [Google Scholar]
- Montgomery J. Passports from the past: Investigating human dispersals using strontium isotope analysis of tooth enamel. Annals of Human Biology 37, 325–346 (2010). [DOI] [PubMed] [Google Scholar]
- Rasmussen M. et al. Ancient human genome sequence of an extinct Palaeo-Eskimo. Nature 463, 757–762, 10.1038/nature08835 (2010). [DOI] [PMC free article] [PubMed] [Google Scholar]
- Tipple B. J., Chau T., Chesson L. A., Fernandez D. P. & Ehleringer J. R. Isolation of strontium pools and isotope ratios in modern human hair. Analytica Chimica Acta 798, 64–73, 10.1016/j.aca.2013.08.054 (2013). [DOI] [PubMed] [Google Scholar]
- Wilson A. S. et al. Stable isotope and DNA evidence for ritual sequences in Inca child sacrifice. Proceedings of the National Academy of Sciences 104, 16456–16461, 10.1073/pnas.0704276104 (2007). [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wilson A. S. et al. Archaeological, radiological, and biological evidence offer insight into Inca child sacrifice. Proceedings of the National Academy of Sciences 110, 13322–13327, 10.1073/pnas.1305117110 (2013). [DOI] [PMC free article] [PubMed] [Google Scholar]
- Olalde I. et al. Derived immune and ancestral pigmentation alleles in a 7,000-year-old Mesolithic European. Nature 507, 225–228, 10.1038/nature12960 (2014). [DOI] [PMC free article] [PubMed] [Google Scholar]
- Montgomery J., Evans J., Chenery S., Pashley V. & Killgrove K. "Gleaming, white and deadly": using lead to track human exposure and geographic origins in the Roman period in Britain. Journal of Roman Archaeology 78, 199–226 (2010). [Google Scholar]
- Muller W., Fricke H., Halliday A. N., McCulloch M. T. & Wartho J. A. Origin and migration of the Alpine Iceman. Science 302, 862–866 (2003). [DOI] [PubMed] [Google Scholar]
- Knudson K. J., Pestle W. J., Torres-Rouff C. & Pimentel G. Assessing the life history of an andean traveller through biogeochemistry: Stable and radiogenic isotope analyses of archaeological human remains from Northern Chile. International Journal of Osteoarchaeology 22, 435–451, 10.1002/oa.1217 (2012). [DOI] [Google Scholar]
- Kristiansen K. & Larsson B. T. The Rise of Bronze Age Society, travels, transmissions and transformations (Cambridge University Press, 2005). [Google Scholar]
- Thomsen T. in Nordiske Fortidsminder Vol. 2, Egekistfundet fra Egtved fra den Aeldere Bronze Alder, 165–214 (Nordiske Fortidsminder, 1929). [Google Scholar]
- Alexandersen V., Bennike P., Hvass L. & Nielsen K.-H. S. in Aarbøger for Nordisk Oldkyndighed og Historie Vol. 1981 (ed Lund Hansen U. ), Egtvedpigen -nye undersoegelser, 17–47 (Nationalmuseet, 1983). [Google Scholar]
- Frei K. M. & Frei R. The geographic distribution of strontium isotopes in Danish surface waters - A base for provenance studies in archaeology, hydrology and agriculture. Applied Geochemistry 26, 326–340 (2011). [Google Scholar]
- Frei K. M. & Price T. D. Strontium isotopes and human mobility in prehistoric Denmark. Archaeological and Anthropological Sciences 2, 103–114, 10.1007/s12520-011-0087-7 (2012). [DOI] [Google Scholar]
- Frei R. & Frei K. M. The geographic distribution of Sr isotopes from surface waters and soil extracts over the island of Bornholm (Denmark) - A base for provenance studies in archaeology and agriculture. Applied Geochemistry 38, 147–160, 10.1016/j.apgeochem.2013.09.007 (2013). [DOI] [Google Scholar]
- Price T. D., Frei K. M., Dobat A. S., Lynnerup N. & Bennike P. Who was in Harold Bluetooth´s army? Strontium isotope investigation of the cemetery at the Viking Age fortress at Trelleborg, Denmark. Antiquity 85, 476–489 (2011). [Google Scholar]
- Mac Vandiviere H. & Dale T. A. Hair-Shaft Diameter as an index of Protein-Calorie Malnutrition. Archives of environmental health 23, 61–66 (1971). [DOI] [PubMed] [Google Scholar]
- Allentoft M. E. et al. The half-life of DNA in bone: measuring decay kinetics in 158 dated fossils. Proc. R. Soc. B-Biol. Sci. 279, 4724–4733, 10.1098/rspb.2012.1745 (2012). [DOI] [PMC free article] [PubMed] [Google Scholar]
- Voerkelius S. et al. Strontium isotopic signatures of natural mineral waters, the reference to a simple geological map and its potential for authentication of food. Food Chemistry 118, 933–940, 10.1016/j.foodchem.2009.04.125 (2010). [DOI] [Google Scholar]
- Evans J. A., Montgomery J., Wildman G. & Bouton N. Spatial variations in biosphere 87Sr/86Sr in Britain. J. Geol. Soc. 167, 1–4 (2010). [Google Scholar]
- Oelze V. M., Nehlich O. & Richards M. P. ‘There is no place like home’—No isotopic evidence for mobility at the Early Bronze Age Cemetery of Singen, Germany. Archaeometry 54, 752–778, 10.1111/j.1475-4754.2011.00644.x (2012). [DOI] [Google Scholar]
- Bentley R. A., Chikhi L. & Price T. D. The Neolithic transition in Europe: Comparing broad scale genetic and local scale isotopic evidence. Antiquity 77, 63–66 (2003). [Google Scholar]
- Sjögren K.-G., Price T. D. & Ahström T. Megaliths and mobility in south-western Sweden. Investigating relationships between a local society and its neighbours using strontium isotopes. J. Anthropol. Archaeol. 28, 85–101 (2009). [Google Scholar]
- Maurer A. F. et al. Bioavailable Sr-87/Sr-86 in different environmental samples - Effects of anthropogenic contamination and implications for isoscapes in past migration studies. Sci. Total Environ. 433, 216–229, 10.1016/j.scitotenv.2012.06.046 (2012). [DOI] [PubMed] [Google Scholar]
- Knipper C. et al. Social differentiation and land use at an Early Iron Age “princely seat”: bioarchaeological investigations at the Glauberg (Germany). Journal of Archaeological Science 41, 818–835, 10.1016/j.jas.2013.09.019 (2014). [DOI] [Google Scholar]
- Lindgreen S. AdapterRemoval: easy cleaning of next-generation sequencing reads. BMC Res. Notes. 5, 1–7, 10.1186/1756-0500-5-337 (2012). [DOI] [PMC free article] [PubMed] [Google Scholar]
- Li H. & Durbin R. Fast and accurate short read alignment with Burrows-Wheeler Transform. Bioinformatics 25, 1754–1760 (2009). [DOI] [PMC free article] [PubMed] [Google Scholar]
- Li H. et al. The Sequence alignment/map (SAM) format and SAMtools. Bioinformatics 25, 2078–2079 (2009). [DOI] [PMC free article] [PubMed] [Google Scholar]
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