Skip to main content
. 2015 Jun 1;10(6):e0126510. doi: 10.1371/journal.pone.0126510

Table 1. The table denotes 63 amino acid residues of p7 ion channel obtained from complete HCV genome of various HCV genotypes and subtypes isolated from different countries.

Entry code Isolated Virus host Chain amino acid HCV p7 (all genotypes) strains Subtypes
P27958 North America Homo sapiens (Human) 747–809 63 >isolate H-1a|P27958|747-809ALENLVILNAASLAGTHGLVSFLVFFCFAWYLKGRWVPGAVYALYGMWPLLLLLLALPQRAYA isolate H 1a
P26664 North America Homo sapiens (Human) 747–809 63 >isolate1-1a|747-809ALENLVILNAASLAGTHGLVSFLVFFCFAWYLKGKWVPGAVYTFYGMWPLLLLLLALPQRAYA isolate 1 1a
Q00269 Japan Homo sapiens (Human) 747–809 63 >isolate HC-JT-1b|Q00269|747-809ALENLVVLNAASLAGADGILSFLVFFCAAWYIKGRLVPGAAYALYGVWPLLLLLLALPPRAYA isolate HC-JT 1b
Q9WMX2 Europe Homo sapiens (Human) 747–809 63 >isolate Con1-1b|Q9WMX2|747-809ALENLVVLNAASVAGAHGILSFLVFFCAAWYIKGRLVPGAAYALYGVWPLLLLLLALPPRAYA isolate Con1 1b
Q03463 Japan Homo sapiens (Human) 747–809 63 >isolate HC-J1-1bALENLVILNAASLAGTRGLVSFLVFFCFAWYLKGRWVPGAAYALYGMWPLLLLLLALPQRAYA isolate HC-J1 1b
P26662 Japan Homo sapiens (Human) 747–809 63 >isolate Japanese-1b|P26662|747-809TLENLVVLNAASVAGAHGLLSFLVFFCAAWYIKGRLVPGAAYALYGVWPLLLLLLALPPRAYA isolate Japanese 1b
Q913V3 Europe Homo sapiens (Human) 747–809 63 >isolate HCR6-1b|747-809ALENLVVLNAASVAGAHGILSFLVFFCAAWYIKGKLVPGAAYAFYGVWPLLLLLLALPPRAYA isolate HCR6 1b
O92972 Japan Homo sapiens (Human) 747–809 63 >strain HC-J4-1b|O92972|747-809ALENLVVLNAASVAGAHGILSFLVFFCAAWYIKGRLAPGAAYAFYGVWPLLLLLLALPPRAYA strain HC-J4 1b
P26663 Asia Homo sapiens (Human) 747–809 63 >isolate BK-1b|P26663|747-809ALENLVVLNSASVAGAHGILSFLVFFCAAWYIKGRLVPGATYALYGVWPLLLLLLALPPRAYA isolate BK 1b
P29846 Taiwan Homo sapiens (Human) 747–809 63 >isolate Taiwan-1b|P29846|747-809ALENLVVFNAASVAGMHGTLSFLVFFCAAWYIKGRLVPGAAYALYGVWPLLLLLLALPPRAYA isolate Taiwan 1b
P26660 Japan Homo sapiens (Human) 751–813 63 >isolateHC-J6-2a|P26660|751-813ALEKLVVLHAASAASCNGFLYFVIFFVAAWYIKGRVVPLATYSLTGLWSFGLLLLALPQQAYA isolate HC-G9 2a
Q99IB8 India Homo sapiens (Human) 751–813 63 >isolateJFH-1-2a|Q99IB8|751-813ALEKLVVLHAASAANCHGLLYFAIFFVAAWHIRGRVVPLTTYCLTGLWPFCLLLMALPRQAYA isolate India 2a
P26661 Japan Homo sapiens (Human) 751–813 63 >isolateHC-J8-2b|P26661|751-813ALEKLIILHSASAASANGPLWFFIFFTAAWYLKGRVVPVATYSVLGLWSFLLLVLALPQQAYA isolate HC-J6 2b
Q9DHD6 POLG_HCVJP Homo sapiens (Human) 751–813 63 >isolate JPUT971017-2b|Q9DHD6|751-813ALEKLIILHSASAASANGPLWFFIFFTAAWYLKGRVVPAATYSVLGLWSFLLLVLALPQQAYA isolate JFH-1) 2b
Q68749 POLG_HCVBB Homo sapiens (Human) 751–813 63 >isolateBEBE1-2c|Q68749|751-813ALEKLVILHAASAASSNGLLYFILFFVAAWCIKGRAVPMVTYTLLGCWSFVLLLMALPHQAYA isolate HC-J8 2c
Q9QAX1 POLG_HCVVA Homo sapiens (Human) 751–813 63 >isolateVAT96-2k|Q9QAX1|751-813ALEKLVILHAASAASSHGMLCFIIFFIAAWYIKGRVTPLVTYSYLGMWSFSLLLLALPQQAYA isolate JPUT971017 2k
Q81487 POLG_HCVTR Homo sapiens (Human) 755–817 63 >isolateTr-Kj-3b|Q81487|755-817AMENLVMLNALSAAGQQGYVWYLVAFCAAWHIRGKLVPLITYGLTGLWPLALLDLLLPQRAYA isolate BEBE1 3b
Q68801 POLG_HCVJK Homo sapiens (Human) 751–813 63 >isolateJK049-3k|Q68801|752-814ALENLIVLNAISAAGTHGIWWSLVAFCVAWHVRGRIFPIAVYSIVGLWPLLLLVLMLPYRAYA isolate VAT96 3k
O39929 POLG_HCVED Homo sapiens (Human) 747–809 63 >isolateED43-4a|O39929|747-809ALSNLININAASAAGAQGFWYAILFICIVWHVKGRFPAAAAYAACGLWPCFLLLLMLPERAYA isolate k3a 4a
M1VKT9 M1VKT9_9HEPC Homo sapiens (Human) 747–809 63 >isolateM1VKT9-4a|747-809ALSNLININAASAAGTQSFWYAILFICIAWHVKGRLPAIAAYAACGMWPLLLLLLMLPERAYA isolateM1VKT9 4a
A2CJ00 A2CJ00_9HEPC Homo sapiens (Human) 747–809 63 >isolateA2CJ00-4d|747-809LANLITINAVSVAGIHGFWHAILLICIAWHVKGRFPAAATYAACGLWPLLLLVLMLPERAYAF isolateA2CJ00 4d
Q1ZZ56 Q1ZZ56_9HEPC Homo sapiens (Human) 747–809 63 >isolateQ1ZZ56-4d|747-809LANLVTINAVSAAGTHGFWYAILVICIAWHVKGRIPAAATYAACGMWPLLLLVLMLPERAYAF isolateQ1ZZ56 4d
A0A023JCC8 A0A023JCC8_9HEPC Homo sapiens (Human) 747–809 63 >isolateA0A023JCC8-4d|747-809LANLITINAVSVASIHGFWYAIFVICIAWHVKGKLPAAATYAACGLWPLLLLVLMLPERAYAF isolateA0A023JCC8 4d
A8S500 A8S500_9HEPC Homo sapiens (Human) 747–809 63 >isolateA8S500-4f|747-809EAALTNLININAAAAVGTHGFYYAILFICVVWYIKGRAPAAAAYAACGMWPLLLLLLALPERA isolateA8S500 4f
A8S507 A8S507_9HEPC Homo sapiens (Human) 747–809 63 >isolateA8S507-4f|747-809AALANLITINATAAVGTHGFCYAILFICVVWYIKGRGPAAAAYAACGMWPLLLLLLALPERAY isolateA8S507 4f
O39928 New Zealand Homo sapiens (Human) 748–810 63 >isolateEUH1480-5a|O39928|748-810TCKNVIVLNAAAAAGNHGFFWGLLVVCLAWHVKGRLVPGATYLCLGVWPLLLVRLLRPHRALA isolate NZL1 5a
O91936 POLG_HCVSA Homo sapiens (Human) 748–810 63 >isolateSA13-5a|O91936|748-810ALENVIVLNAAAAAGTHGFFWGLLVICFAWHFKGRLVPGATYLCLGIWPLLLLLFLLPQRALA isolate Tr-Kj 5b
Q5I2N3 POLG_HCV6A Homo sapiens (Human) 752–814 63 >isolate6a33-6a|Q5I2N3|752-814AVERLVVLNAASAAGTAGWWWAVLFLCCVWYVKGRLVPACTYMALGMWPLLLTILALPHRAYA isolate JK049 6a
O39927 POLG_HCVEU Homo sapiens (Human) 751–813 63 >isolateEUHK2-6a|O39927|751-813AVERLVVLNAASAAGTAGWWWAVLFLCCVWYVKGRLVPACTYMALGMWPLLLTILALPPRAYA isolate ED43 6a
O92529 POLG_HCVT5 Homo sapiens (Human) 752–814 63 >isolateTh580-6b|O92529|752-814ALERLVVLNAASAAGTAGWCWTLIFLCCVWHVKGRLVPACTYTALGMWPILLVILALPQRAYA isolate EUH1480 6b
O92532 POLG_HCVVP Homo sapiens (Human) 752–814 63 >sp|O92532|748-810ALENVIVLNAASAASCQGLLWGLIFICCAWHVRGRAVPVTTYALLQLWPLLLLILALPRRAYA isolate VN004 6h
O92531 POLG_HCVVO Homo sapiens (Human) 752–814 63 >sp|O92531|749-811ALENLIVLNATSAAGSQGWVWGVVFICAAWYIRGRAAPITTYAILQLWPLLLLVLALPRRAYA isolate VN405 6k

Each strain is represented by Uniprot with their entry code.