Table 1. The table denotes 63 amino acid residues of p7 ion channel obtained from complete HCV genome of various HCV genotypes and subtypes isolated from different countries.
Entry code | Isolated | Virus host | Chain | amino acid | HCV p7 (all genotypes) | strains | Subtypes |
---|---|---|---|---|---|---|---|
P27958 | North America | Homo sapiens (Human) | 747–809 | 63 | >isolate H-1a|P27958|747-809ALENLVILNAASLAGTHGLVSFLVFFCFAWYLKGRWVPGAVYALYGMWPLLLLLLALPQRAYA | isolate H | 1a |
P26664 | North America | Homo sapiens (Human) | 747–809 | 63 | >isolate1-1a|747-809ALENLVILNAASLAGTHGLVSFLVFFCFAWYLKGKWVPGAVYTFYGMWPLLLLLLALPQRAYA | isolate 1 | 1a |
Q00269 | Japan | Homo sapiens (Human) | 747–809 | 63 | >isolate HC-JT-1b|Q00269|747-809ALENLVVLNAASLAGADGILSFLVFFCAAWYIKGRLVPGAAYALYGVWPLLLLLLALPPRAYA | isolate HC-JT | 1b |
Q9WMX2 | Europe | Homo sapiens (Human) | 747–809 | 63 | >isolate Con1-1b|Q9WMX2|747-809ALENLVVLNAASVAGAHGILSFLVFFCAAWYIKGRLVPGAAYALYGVWPLLLLLLALPPRAYA | isolate Con1 | 1b |
Q03463 | Japan | Homo sapiens (Human) | 747–809 | 63 | >isolate HC-J1-1bALENLVILNAASLAGTRGLVSFLVFFCFAWYLKGRWVPGAAYALYGMWPLLLLLLALPQRAYA | isolate HC-J1 | 1b |
P26662 | Japan | Homo sapiens (Human) | 747–809 | 63 | >isolate Japanese-1b|P26662|747-809TLENLVVLNAASVAGAHGLLSFLVFFCAAWYIKGRLVPGAAYALYGVWPLLLLLLALPPRAYA | isolate Japanese | 1b |
Q913V3 | Europe | Homo sapiens (Human) | 747–809 | 63 | >isolate HCR6-1b|747-809ALENLVVLNAASVAGAHGILSFLVFFCAAWYIKGKLVPGAAYAFYGVWPLLLLLLALPPRAYA | isolate HCR6 | 1b |
O92972 | Japan | Homo sapiens (Human) | 747–809 | 63 | >strain HC-J4-1b|O92972|747-809ALENLVVLNAASVAGAHGILSFLVFFCAAWYIKGRLAPGAAYAFYGVWPLLLLLLALPPRAYA | strain HC-J4 | 1b |
P26663 | Asia | Homo sapiens (Human) | 747–809 | 63 | >isolate BK-1b|P26663|747-809ALENLVVLNSASVAGAHGILSFLVFFCAAWYIKGRLVPGATYALYGVWPLLLLLLALPPRAYA | isolate BK | 1b |
P29846 | Taiwan | Homo sapiens (Human) | 747–809 | 63 | >isolate Taiwan-1b|P29846|747-809ALENLVVFNAASVAGMHGTLSFLVFFCAAWYIKGRLVPGAAYALYGVWPLLLLLLALPPRAYA | isolate Taiwan | 1b |
P26660 | Japan | Homo sapiens (Human) | 751–813 | 63 | >isolateHC-J6-2a|P26660|751-813ALEKLVVLHAASAASCNGFLYFVIFFVAAWYIKGRVVPLATYSLTGLWSFGLLLLALPQQAYA | isolate HC-G9 | 2a |
Q99IB8 | India | Homo sapiens (Human) | 751–813 | 63 | >isolateJFH-1-2a|Q99IB8|751-813ALEKLVVLHAASAANCHGLLYFAIFFVAAWHIRGRVVPLTTYCLTGLWPFCLLLMALPRQAYA | isolate India | 2a |
P26661 | Japan | Homo sapiens (Human) | 751–813 | 63 | >isolateHC-J8-2b|P26661|751-813ALEKLIILHSASAASANGPLWFFIFFTAAWYLKGRVVPVATYSVLGLWSFLLLVLALPQQAYA | isolate HC-J6 | 2b |
Q9DHD6 | POLG_HCVJP | Homo sapiens (Human) | 751–813 | 63 | >isolate JPUT971017-2b|Q9DHD6|751-813ALEKLIILHSASAASANGPLWFFIFFTAAWYLKGRVVPAATYSVLGLWSFLLLVLALPQQAYA | isolate JFH-1) | 2b |
Q68749 | POLG_HCVBB | Homo sapiens (Human) | 751–813 | 63 | >isolateBEBE1-2c|Q68749|751-813ALEKLVILHAASAASSNGLLYFILFFVAAWCIKGRAVPMVTYTLLGCWSFVLLLMALPHQAYA | isolate HC-J8 | 2c |
Q9QAX1 | POLG_HCVVA | Homo sapiens (Human) | 751–813 | 63 | >isolateVAT96-2k|Q9QAX1|751-813ALEKLVILHAASAASSHGMLCFIIFFIAAWYIKGRVTPLVTYSYLGMWSFSLLLLALPQQAYA | isolate JPUT971017 | 2k |
Q81487 | POLG_HCVTR | Homo sapiens (Human) | 755–817 | 63 | >isolateTr-Kj-3b|Q81487|755-817AMENLVMLNALSAAGQQGYVWYLVAFCAAWHIRGKLVPLITYGLTGLWPLALLDLLLPQRAYA | isolate BEBE1 | 3b |
Q68801 | POLG_HCVJK | Homo sapiens (Human) | 751–813 | 63 | >isolateJK049-3k|Q68801|752-814ALENLIVLNAISAAGTHGIWWSLVAFCVAWHVRGRIFPIAVYSIVGLWPLLLLVLMLPYRAYA | isolate VAT96 | 3k |
O39929 | POLG_HCVED | Homo sapiens (Human) | 747–809 | 63 | >isolateED43-4a|O39929|747-809ALSNLININAASAAGAQGFWYAILFICIVWHVKGRFPAAAAYAACGLWPCFLLLLMLPERAYA | isolate k3a | 4a |
M1VKT9 | M1VKT9_9HEPC | Homo sapiens (Human) | 747–809 | 63 | >isolateM1VKT9-4a|747-809ALSNLININAASAAGTQSFWYAILFICIAWHVKGRLPAIAAYAACGMWPLLLLLLMLPERAYA | isolateM1VKT9 | 4a |
A2CJ00 | A2CJ00_9HEPC | Homo sapiens (Human) | 747–809 | 63 | >isolateA2CJ00-4d|747-809LANLITINAVSVAGIHGFWHAILLICIAWHVKGRFPAAATYAACGLWPLLLLVLMLPERAYAF | isolateA2CJ00 | 4d |
Q1ZZ56 | Q1ZZ56_9HEPC | Homo sapiens (Human) | 747–809 | 63 | >isolateQ1ZZ56-4d|747-809LANLVTINAVSAAGTHGFWYAILVICIAWHVKGRIPAAATYAACGMWPLLLLVLMLPERAYAF | isolateQ1ZZ56 | 4d |
A0A023JCC8 | A0A023JCC8_9HEPC | Homo sapiens (Human) | 747–809 | 63 | >isolateA0A023JCC8-4d|747-809LANLITINAVSVASIHGFWYAIFVICIAWHVKGKLPAAATYAACGLWPLLLLVLMLPERAYAF | isolateA0A023JCC8 | 4d |
A8S500 | A8S500_9HEPC | Homo sapiens (Human) | 747–809 | 63 | >isolateA8S500-4f|747-809EAALTNLININAAAAVGTHGFYYAILFICVVWYIKGRAPAAAAYAACGMWPLLLLLLALPERA | isolateA8S500 | 4f |
A8S507 | A8S507_9HEPC | Homo sapiens (Human) | 747–809 | 63 | >isolateA8S507-4f|747-809AALANLITINATAAVGTHGFCYAILFICVVWYIKGRGPAAAAYAACGMWPLLLLLLALPERAY | isolateA8S507 | 4f |
O39928 | New Zealand | Homo sapiens (Human) | 748–810 | 63 | >isolateEUH1480-5a|O39928|748-810TCKNVIVLNAAAAAGNHGFFWGLLVVCLAWHVKGRLVPGATYLCLGVWPLLLVRLLRPHRALA | isolate NZL1 | 5a |
O91936 | POLG_HCVSA | Homo sapiens (Human) | 748–810 | 63 | >isolateSA13-5a|O91936|748-810ALENVIVLNAAAAAGTHGFFWGLLVICFAWHFKGRLVPGATYLCLGIWPLLLLLFLLPQRALA | isolate Tr-Kj | 5b |
Q5I2N3 | POLG_HCV6A | Homo sapiens (Human) | 752–814 | 63 | >isolate6a33-6a|Q5I2N3|752-814AVERLVVLNAASAAGTAGWWWAVLFLCCVWYVKGRLVPACTYMALGMWPLLLTILALPHRAYA | isolate JK049 | 6a |
O39927 | POLG_HCVEU | Homo sapiens (Human) | 751–813 | 63 | >isolateEUHK2-6a|O39927|751-813AVERLVVLNAASAAGTAGWWWAVLFLCCVWYVKGRLVPACTYMALGMWPLLLTILALPPRAYA | isolate ED43 | 6a |
O92529 | POLG_HCVT5 | Homo sapiens (Human) | 752–814 | 63 | >isolateTh580-6b|O92529|752-814ALERLVVLNAASAAGTAGWCWTLIFLCCVWHVKGRLVPACTYTALGMWPILLVILALPQRAYA | isolate EUH1480 | 6b |
O92532 | POLG_HCVVP | Homo sapiens (Human) | 752–814 | 63 | >sp|O92532|748-810ALENVIVLNAASAASCQGLLWGLIFICCAWHVRGRAVPVTTYALLQLWPLLLLILALPRRAYA | isolate VN004 | 6h |
O92531 | POLG_HCVVO | Homo sapiens (Human) | 752–814 | 63 | >sp|O92531|749-811ALENLIVLNATSAAGSQGWVWGVVFICAAWYIRGRAAPITTYAILQLWPLLLLVLALPRRAYA | isolate VN405 | 6k |
Each strain is represented by Uniprot with their entry code.