Table 2. Hydrogen bonds analysis of the small-molecule inhibitor PI003 into PIM1, PIM2 and PIM3 binding sites based upon MD simulations.
Complex | Donor | Acceptor-H | Acceptor | % Occupied | Distance(Ǻ) | Angle(Degree) |
---|---|---|---|---|---|---|
PI003-Pim1 | 57:OE2 | DRG:H37 | DRG:O22 | 99.6 | 2.620 | 19.44 |
154:OD2 | DRG:H35 | DRG:O18 | 42.2 | 2.679 | 15.11 | |
PI003-Pim2 | 80:OD1 | DRG:H36 | DRG:O19 | 74.3 | 2.660 | 19.31 |
PI003-Pim3 | 150:OD2 | DRG:H36 | DRG:O19 | 97.3 | 2.682 | 16.71 |
51:OE2 | DRG:H37 | DRG:O22 | 95.2 | 2.626 | 27.04 | |
DRG:O21 | 150:H | 150:N | 25.8 | 2.836 | 27.93 |