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. Author manuscript; available in PMC: 2015 Jul 9.
Published in final edited form as: Proteins. 2009 Jan;74(1):122–132. doi: 10.1002/prot.22136

Table II.

Key residues of cdk2 in the cdk2/cyclin interface are identified by PP_SITE

1FIN (CDK2/Cyclin A) 1W98 (CDK2/Cyclin E1) 2JGZ (CDK2/Cyclin B1) 1E9H (CDK2/Cyclin A3) 2CCH (CDK2/Cyclin A2)
A/B C/D A/B A/B A/B C/D A/B C/D
L37 + + + +
E40 ++ ++ ++ ++
T41 +
E42 ++ ++ ++ ++ ++ ++
V44 ++ ++ ++ ++ ++ ++ ++ ++
I49 ++ ++ ++ ++ ++ ++ ++ ++
R50 + + ++ ++ ++ ++ ++ ++
I52 + ++ ++ + ++ ++ ++ ++
S53 +
K56 + + + + + +
E57 + + ++ + + + + +
V69 + ++ + + + + + +
H71 ++ + + ++ ++ + ++ ++
E73 + + + +
L76 + ++ ++ + +
S120 +
H121 +
R122 + + ++ + + + + +
R150 + + ++ + ++ ++ + ++
F152 ++ ++ ++ ++ ++ ++ ++ +
V154 ++ ++ ++ ++ ++ ++ ++ ++
P155 + + ++ + ++ ++ ++ ++
V156 ++ ++
R157 + ++ + + + + + +
Y159 ++ ++
E162 + + + + + +
K178 +
Y179 + ++ +
N272 + +
K278 ++ + + + + + + ++

Symbols of + and ++ denote the important residues in an increasing order of their contribution to the interaction energy of the interface. Residues shown in bold are significantly involved across all cdk2/cyclin interfaces that were analyzed using the structure of the cdk2/cyclin complex reported in PDB files: 1FIN, 1W98, 2JGZ, 1E9H, and 2CCH. Here A/B (C/D) indicates that the interface chosen for analysis is between chain A and chain B (chain C and chain D) in the corresponding PDB file.