Abstract
Lipoma in patients with the multiple endocrine neoplasia type 1 (MEN1) syndrome is a type of benign fat-cell tumor that has biallelic inactivation of MEN1 that encodes menin and could serve as a model to investigate normal and pathologic fat-cell (adipocyte) proliferation and function. The role of menin and its target genes in adipocytes is not known. We used in vitro differentiation to derive matched normal and menin-deficient adipocytes from wild type (WT) and menin-null (Men1-KO) mouse embryonic stem cells (mESCs), respectively, or 3T3-L1 cells without or with menin knockdown to investigate cell size, lipid content, and gene expression changes. Adipocytes derived from Men1-KO mESCs or after menin knockdown in 3T3-L1 cells showed a 1.5–1.7-fold increase in fat-cell size. Global gene expression analysis of mESC-derived adipocytes showed that lack of menin downregulated the expression of many differentially methylated genes including the tumor suppressor long noncoding RNA Meg3 but upregulated gene expression from the prolactin gene family locus. Our results show that menin deficiency leads to fat-cell hypertrophy and provide model systems that could be used to study the regulation of fat-cell size.
1. Introduction
Patients with the multiple endocrine neoplasia type 1 (MEN1) syndrome carry a heterozygous germline inactivating mutation in MEN1 that predisposes to tumors of multiple endocrine and nonendocrine tissues (OMIM ID 131100 and 613733) [1–3]. Lipoma in patients with MEN1 occurs as an overgrowth of fat tissue, frequently multiple, and usually in the subcutaneous area of the back, neck, shoulder, arm, thigh, or abdomen [4, 5]. The MEN1-associated lipoma is a type of benign fat-cell tumor occurring in about 30% of MEN1 patients and similar to the other MEN1-associated endocrine and nonendocrine tumors has biallelic inactivation of MEN1 (1st hit in the germline, 2nd hit tissue-specific) [5–9]. Lipoma tissue samples are rarely available for analysis because the tumor is harmless and removed only for cosmetic reasons by surgery or liposuction, and the tumor does not recur after removal. In the mouse models of Men1 loss generated in different laboratories, the endocrine tumors of MEN1 are frequently observed [10, 11]. However, lipoma was observed only in one mouse [12]. Therefore, there is a dearth of molecular studies exploring the pathogenesis of MEN1-associated lipoma.
The MEN1 encoded menin is a widely expressed, predominantly nuclear protein involved in transcriptional regulation and other vital cellular functions [13, 14]. Comparing gene expression changes in normal and menin-deficient fat-cells (adipocytes) could provide insights into the pathogenesis of MEN1-associated lipomas; at the same time such studies could also provide insights about normal adipocyte growth and function. No such studies have been performed perhaps due to the limitation of procuring normal adipocytes that can serve as a matched control for the abnormal adipocytes in the lipoma. Specific cell types produced by in vitro differentiation of embryonic stem cells (ESCs) or induced pluripotent stem cells (iPSCs) that are normal or mutant for a disease-causing gene can serve as useful models to study molecular processes that are altered in disease [15, 16]. This is highly desirable for affected cell types that are not easily available, are difficult to isolate, and are not abundant or that lie among other normal cell types. Menin-null (Men1-KO) mouse ESCs (mESCs) can differentiate in vitro into pancreatic islet-like endocrine cells (PILECs); however, they are defective in hematopoietic differentiation [17, 18]. It is not known whether Men1-KO mESCs can differentiate into adipocytes.
Gene expression analyses of wild type (WT) and Men1-KO mESCs, and mESC-derived WT and Men1-KO PILECs have shown a role of the menin-dependent histone H3 lysine-4 trimethyl mark (H3K4me3) in the regulation of genes clustered at the Meg3 locus and the four Hox gene clusters [18]. Most gene clusters are highly conserved, such as the four Hox gene clusters [19]. However, the prolactin family gene cluster is present in rodents and not in humans [20]. In humans, the prolactin gene resides alone in a gene poor region of the genome on chromosome 6. In rodents, gene duplication has generated a large prolactin gene family of 26 genes near the prolactin gene (mouse chromosome 13) with varying expression and functions in pregnancy and lactation [21, 22].
In this study, we show that adipocytes could be generated by in vitro differentiation of Men1-KO mESCs and upon menin knockdown from 3T3-L1 preadipocyte cells. These menin-deficient adipocytes and their corresponding normal adipocytes were analyzed for cell size, lipid content, and gene expression changes. Menin-deficient adipocytes from both cell types showed increased cell size with a modest increase in lipid content; and adipocytes derived from Men1-KO mESCs showed reduced expression of a few differentially methylated genes including the long noncoding RNA Meg3 and increased expression of prolactin family genes. These cells could enable further investigations by genomic and proteomic approaches to understand physiological and pathological states of adipocytes.
2. Materials and Methods
2.1. Primers
All the primers used in this study are provided in Supplementary Table 1 in Supplementary Material available online at http://dx.doi.org/10.1155/2015/149826.
2.2. Differentiation of Mouse Embryonic Stem Cells (mESCs) into Adipocytes
Adipogenesis was performed by using the reagents and protocol from a mESC adipogenesis kit (Millipore). Wild type TC-1 and Men1-KO-3.2N mESCs [17] were cultured on a feeder layer of primary mouse embryonic fibroblasts (MEFs) (ATCC) in ESC maintenance medium containing leukemia inhibitory factor (LIF). The mESCs were processed to obtain feeder-free cells by culturing on tissue culture treated dishes few times for an hour each to get rid of the attached feeder layer cells, and the unattached feeder-free mESCs were subsequently cultured on gelatin-coated dishes in ESC maintenance medium containing LIF. Cells were detached with accutase and plated in embryoid body (EB) formation medium (EB medium) (ESC maintenance medium without LIF) in nonadherent dishes for 2 days and then in medium containing inducer-A solution (all-trans-retinoic acid) for 3 days with a medium change every day. On day 5, the retinoic acid induced EBs were plated in gelatin-coated 24-well plates in adipocyte differentiation medium (EB medium + 3,3′,5-triiodo-L-thyronine (T3) + insulin). The adipocyte differentiation medium was changed every 2 days for a total of 21 days to allow adipocyte formation.
2.3. Transfection and Differentiation of 3T3-L1 Cells into Adipocytes
3T3-L1 cells (ATCC) were cultured in high glucose Dulbecco's Modified Eagle's Medium (DMEM) supplemented with 10% Fetal Bovine Serum (FBS) and 1X antibiotic/antimycotic (3T3-L1 cell propagation medium). For menin knockdown, 1 × 106 cells were electroporated with 10 μg of control shRNA plasmid or Men1-shRNA plasmid [23] by using the Nepa Gene Super Electroporator NEPA21 Type II (Bulldog-Bio) (Porting Pulse: volts (V) = 175, length milliseconds (ms) = 5, interval (ms) = 50, number = 2, and decay rate (%) = 10; transfer pulse: V = 20, length (ms) = 50, interval (ms) = 50, number = 5, decay rate (%) = 40, and polarity = +/−). Electroporated cells were plated in 3T3-L1 cell propagation medium overnight and induced to differentiate into adipocytes using an established protocol [24]. On the next day medium was changed to adipocyte differentiation medium (3T3-L1 cell propagation medium with isobutylmethylxanthine, dexamethasone, and insulin) and incubated for 2 days. Thereafter the medium was changed to maintenance medium (3T3-L1 cell propagation medium with insulin) for the next 4 days with a change of medium every 2 days to allow adipocyte formation.
2.4. Oil Red O Staining and Lipid Content
Adipocytes obtained after 21 days of mESC differentiation were processed for Oil Red O staining by using the reagents provided in the mESC adipogenesis kit (Millipore). Oil Red O specifically stains lipids such as triglycerides and cholesteryl oleate [25]. For adipocytes derived from 3T3-L1 cells, Oil Red O (Sigma) reconstituted in isopropanol was diluted 3 : 2 with distilled water (dH2O). Cells in the culture dish were rinsed with 1X Dulbecco's Phosphate-Buffered Saline (DPBS) and fixed with 4% paraformaldehyde for 20 minutes and then rinsed with 1X DPBS. Oil Red O staining solution was added and the cells were allowed to stain for 20 minutes. Cells were rinsed 4 times with 1X DPBS. To determine lipid accumulation in the adipocytes, after aspirating the last 1X DPBS rinse, 0.25 mL dye extraction solution was added to each well to extract the Oil Red O dye from the stained lipids. The plate was allowed to shake on an orbital shaker for 30 minutes and the extracted dye was transferred to a 96-well plate, and optical density (OD) was measured at 520 nm in a plate reader (Molecular Devices).
2.5. Microscopy and Cell Size Measurement
Images of Oil Red O stained cells were captured by bright-field microscopy on the Axiovert 40 CFL (Zeiss) or DM5000B (Leica Microsystems) at 400x magnification. The size of Oil Red O stained cells was determined from cells contained in 3–5 microscopy fields per experiment. As an index of cell size, the cell diameter was measured from microscopy images. Microscopic morphological images of the adipocytes were printed, circles were drawn at the periphery of the individual cells around the circular shape formed by the orange lipid droplets accumulated inside the cell, and the diameter of the circles was noted using a ruler [26–28]. The diameter mean and SD were plotted for each experiment.
2.6. RNA Isolation, Conventional Reverse-Transcriptase PCR (RT-PCR), Microarray, and Real-Time Quantitative PCR (QPCR)
Total RNA was isolated by using the RNeasy mini kit (Qiagen) and DNase treated by using the Turbo DNA-free kit (Ambion/Life Technologies).
Expression of adipogenesis marker genes (Adiponectin, Pgc1α, and Pparγ), Men1, and an internal control gene (Gapdh) was determined by conventional RT-PCR using RNA isolated from cells before and after differentiation. OligodT-primed first strand cDNA was used for PCR using the GoTaq Green Master Mix (Promega). Equal amount of PCR products was analyzed by agarose gel electrophoresis.
RNA from WT and Men1-KO mESC-derived adipocytes was analyzed for global gene expression changes at the NIDDK genomics core facility (Affymetrix microarray platform). RNA samples (n = 3 of each) were labeled and hybridized to Genechip mouse genome 430 arrays. Microarray data were normalized and analyzed using Affymetrix Genechip software, Microarray analysis Suite 5.0 (Affymetrix). For the validation and further analysis of the target genes identified by microarray, OligodT-primed first strand cDNA was used for QPCR using the Brilliant II SYBR Green QPCR Kit (Agilent Technologies) and Mx3000P PCR machine (Stratagene). To calculate fold change, 2−ΔΔCt values were calculated from the raw threshold values generated by the Mx3000P software. Gapdh was used as the internal control.
2.7. Western Blot Analysis
Whole cell extracts (WCE) were prepared in cell culture lysis reagent (Promega), and protein quantitation was performed with the DC protein assay kit (Bio-Rad). Equal amounts of protein were separated on 10% Tris-Glycine gels, transferred to nitrocellulose membrane, and probed with appropriate dilution of primary and secondary antibodies, and the blots were developed using enhanced chemiluminescence (ECL) (Millipore). Antibodies used were rabbit antimenin (Bethyl, A300-105A) and mouse antitubulin (Calbiochem, CP06).
2.8. Statistics
Data from at least 3 independent experiments or measurements were plotted as mean and standard deviation (SD). Differences between groups were compared by Student's t-tests. p < 0.05 was considered significant.
3. Results
3.1. Men1-KO mESCs Can Undergo In Vitro Differentiation into Adipocytes and Show Increased Adipocyte Cell Size
To determine the ability of Men1-KO mESCs to differentiate into adipocytes, in vitro differentiation of wild type (WT) and Men1-KO mESCs was performed using an established protocol (Figure 1(a)) [29]. Both cell types were equally capable of differentiating into adipocytes with similar expression of adipocyte-specific marker genes (Adiponectin, Pgc1α, and Pparγ) and similar level of Oil Red O staining in lipid droplets (Figures 1(b) and 1(c)). Adipocytes derived from Men1-KO mESCs were 1.5- to 1.7-fold larger than WT adipocytes accompanied with a slight increase in lipid content (Figures 1(d) and 1(e)). Thus, in vitro adipogenesis of menin-null mESCs is possible and the menin-null adipocytes are larger than normal, suggesting a role for menin in determining fat-cell size.
3.2. Gene Expression Profile of mESC-Derived Menin-Null Adipocytes Shows Reduced Expression of Several Differentially Methylated Genes
To examine the consequence of menin loss in lipoma cells, WT and Men1-KO mESC-derived adipocytes were used as a surrogate for gene expression microarray analysis. The top 40 genes differentially expressed in the Men1-KO adipocytes (at least 3-fold change compared with WT adipocytes; p < 0.001) were validated by QPCR. Unknown/predicted genes were not considered in this validation set of 40 genes (Table 1). More than 2-fold change was confirmed for 38 genes in Men1-KO versus WT adipocytes (Table 1).
Table 1.
Affymetrix probe set ID | Ref seq. transcript ID | Gene symbol | Gene title | Microarray fold change | QPCR fold change |
---|---|---|---|---|---|
1451634_at | NR_002853 | Airn | Antisense Igf2r RNA | −9.24 | −18.5 |
1457030_at | NR_028265 | Mirg | miRNA containing gene | −8.36 | −6.54 |
1438588_at | NM_009538 | Plagl1 | Pleiomorphic adenoma gene-like 1 | −7.04 | −7.46 |
1427580_a_at | NR_028261 | Rian | RNA imprinted and accumulated in nucleus | −6.96 | −10.7 |
1436713_s_at | NR_003633 | Meg3 | Maternally expressed gene 3 | −6.72 | −7.35 |
1417836_at | NM_024198 | Gpx7 | Glutathione peroxidase 7 | −5.91 | −6.49 |
1421461_at | NM_001122949 | Mpl | Myeloproliferative leukemia virus oncogene | −5.68 | −1.74 |
1418061_at | NM_013589 | Ltbp2 | Latent transforming growth factor beta binding protein 2 | −5.51 | −2.28 |
1428896_at | NM_026840 | Pdgfrl | Platelet-derived growth factor receptor-like | −4.52 | −2.9 |
1419411_at | NM_009312 | Tac2 | Tachykinin 2 | −4.34 | −3.29 |
1423506_a_at | NM_010923 | Nnat | Neuronatin | −3.92 | −2.86 |
1460412_at | NM_024237 | Fbln7 | Fibulin 7 | −3.91 | −7.51 |
1448788_at | NM_010818 | Cd200 | CD200 antigen | −3.76 | −4.5 |
1421074_at | NM_007825 | Cyp7b1 | Cytochrome P450, family 7, subfamily b, and polypeptide 1 | −3.73 | −3.09 |
1419197_x_at | NM_032541 | Hamp | Hepcidin antimicrobial peptide | −3.73 | −2.84 |
1417979_at | NM_022322 | Tnmd | Tenomodulin | −3.63 | −3.36 |
1425040_at | NM_028593 | Cybrd1 | Cytochrome b reductase 1 | −3.57 | −4.69 |
1419292_at | NM_001042615 | Htra3 | HtrA serine peptidase 3 | −3.49 | −5.69 |
1435476_a_at | NM_001077189 | Fcgr2b | Fc receptor, IgG, low affinity IIb | −3.27 | −8.81 |
1416347_at | NM_001168488 | Men1 | Multiple endocrine neoplasia 1 | −3.18 | −714.1 |
1450285_at | NM_011667 | Ube1y1 | Ubiquitin-activating enzyme E1, Chr Y 1 | 4.34 | 9.38 |
1435064_a_at | NM_020626 | Tmem27 | Transmembrane protein 27 | 4.39 | 9.44 |
1448783_at | NM_021291 | Slc7a9 | Solute carrier family 7 (cationic amino acid transporter, y+ system), member 9 | 4.43 | 17.26 |
1456601_x_at | NM_007503 | Fxyd2 | FXYD domain-containing ion transport regulator 2 | 4.51 | 19.42 |
1424279_at | NM_001111048 | Fga | Fibrinogen alpha chain | 4.74 | 7.31 |
1418916_a_at | NM_029269 | Spp2 | Secreted phosphoprotein 2 | 4.86 | 19.56 |
1449907_at | NM_001163028 | Bcmo1 | Beta-carotene 15,15′-monooxygenase | 4.92 | 2.84 |
1422289_a_at | NM_029636 | Ctsq | Cathepsin Q | 4.94 | 6.32 |
1418766_s_at | NM_001161355 | Timd2 | T-cell immunoglobulin and mucin domain-containing 2 | 5.2 | 13.92 |
1443824_s_at | NM_053070 | Car7 | Carbonic anhydrase 7 | 5.39 | 5.89 |
1417761_at | NM_007468 | Apoa4 | Apolipoprotein A-IV | 5.59 | 7.67 |
1418724_at | NM_007686 | Cfi | Complement component factor i | 5.86 | 9.12 |
1440218_at | NM_001033364 | Cdhr2 | Cadherin-related family member 2 | 6.02 | −1.07 |
1452165_at | NM_025532 | Prl2b1 | Prolactin family 2, subfamily b, member 1 | 6.06 | 19.69 |
1451513_x_at | NM_009243 | Serpina1a | Serine (or cysteine) peptidase inhibitor, clade A, member 1A | 6.28 | 12.46 |
1418282_x_at | NM_009244 | Serpina1b | Serine (or cysteine) peptidase inhibitor, clade A, member 1B | 6.34 | 6.02 |
1424673_at | NM_053165 | Clec2h | C-type lectin domain family 2, member h | 7.19 | 7.11 |
1429826_at | NM_029355 | Prl7b1 | Prolactin family 7, subfamily b, member 1 | 7.58 | 29.44 |
1448572_at | NM_011165 | Prl4a1 | Prolactin family 4, subfamily a, member 1 | 15.49 | 29.65 |
1436717_x_at | NM_008221.4 | Hbb-y | Hemoglobin Y, beta-like embryonic chain | 19.31 | 2.8 |
Validation of top 20 downregulated or upregulated genes (p < 0.001) identified in the gene expression microarray analysis. QPCR fold change was normalized to Gapdh. Bold, genes regulated by differential DNA methylation. Italic, genes from the prolactin gene family.
Men1-KO adipocytes showed more than 3-fold downregulation of 12 differentially methylated genes including 3 genes from the Meg3 locus (Meg3, Mirg, and Rian) and showed more than 6-fold upregulation of 3 genes from the prolactin locus (Prl2b1, Prl7b1, and Prl4a1) (Table 1). Differential expression of genes that regulate the cell cycle has been observed in pancreatic islet β-cell tumors of mice with tissue-specific conditional loss of menin [30]. Analysis of gene expression microarray data showed that the expression of cell cycle genes was unaffected in Men1-KO adipocytes (not more than 2-fold change and p < 0.001). Also, menin-binding protein partners [13] were not present among the differentially expressed genes.
DNA methylation inversely correlates with a gene activating chromatin modification, the histone H3 lysine-4 trimethyl mark (H3K4me3) [31]. Menin partners with the MLL-protein-complex to place this active mark in chromatin, and loss of menin leads to loss of H3K4me3 on specific genes [18, 32]. Among the 12 genes found to have differential DNA methylation, a comparison with our previously published data [18] showed that only one gene (Meg3) downregulated in mESC-derived menin-null adipocytes also showed significantly reduced histone methylation (H3K4me3) in menin-null mESCs. We have previously shown that menin loss in mESCs resulted in reduced expression of the long noncoding RNA Meg3 by facilitating DNA methylation in the Meg3 promoter region [33]. These observations suggest a role for menin in regulating H3K4me3 and consequently DNA methylation at specific genes in adipocytes and other MEN1-associated target tissues.
3.3. Prolactin Family Genes Are Upregulated in mESC-Derived Menin-Null Adipocytes
The prolactin gene family consists of 26 members clustered in a region of mouse chromosome 13 that includes Hgdfl1, Prl, and Sox4 (Figure 2(a)). The syntenic region on human chromosome 6 only contains HGDF1L, PRL, and SOX4 (Figure 2(a)). Therefore, the prolactin gene family is unique to the rodent genome. Gene expression microarray analysis showed upregulation of 3 genes from this family in adipocytes derived from Men1-KO mESCs (Table 1). QPCR analysis of all the prolactin family genes (n = 26) using RNA isolated from mESC-derived adipocytes showed 1.6- to 29-fold upregulation of 19 genes in menin-null adipocytes; the expression of 3 genes was unchanged, and 4 genes did not yield any PCR product (Figure 2(b)). These data show that loss of menin regulates gene expression at the mouse prolactin gene family locus.
3.4. 3T3-L1 Cells with Menin Knockdown Can Undergo In Vitro Differentiation into Adipocytes and Also Show Increased Adipocyte Cell Size
To further investigate the results obtained from mESC-derived adipocytes, an independent experimental model of in vitro adipogenesis was employed. The consequence of menin deficiency on adipocytes was studied in 3T3-L1 cells, a well-characterized preadipocyte cell line that is used for in vitro adipogenesis [24] (Figure 3(a)). Menin knockdown in differentiated 3T3-L1 cells was confirmed by western blot (Figure 3(b)). Induction of adipocyte marker gene expression (Pgc1α and Pparγ) and Oil Red O staining was also observed in adipocytes derived after menin knockdown (Figures 3(c) and 3(d)). Similar to the observation in the Men1-KO mESC-derived adipocytes, the 3T3-L1 adipocytes with menin knockdown showed 1.5- to 1.7-fold increase in cell size with a modest increase in lipid content (Figures 3(e) and 3(f)). Genes with more than 5-fold change in mESC-derived Men1-KO adipocytes (Table 1) were analyzed for expression changes in the 3T3-L1 adipogenesis model. Among the 20 genes analyzed (8 downregulated and 12 upregulated in Men1-KO mESC-derived adipocytes), only 4 were expressed in 3T3-L1-derived adipocytes with or without menin knockdown. Modest expression change (about 2-fold) was observed for 2 of these 4 genes in the menin knockdown 3T3-L1-derived adipocytes (Car7 and Hbb-y) (Figure 3(g)). The expression of 7 prolactin family genes with the highest fold change between mESC-derived Men1-KO and WT adipocytes was also analyzed by QPCR (Prl4a1, Prl7b1, Prl2b1, Prl7a1, Prl5a1, Prl7d1, and Prl2a1). Three genes (Prl4a1, Prl5a1, and Prl7a1) gave no product, and no significant differences were observed for the other 4 genes. Therefore, using an independent model of in vitro adipogenesis, we could confirm that menin deficiency did not affect adipocyte differentiation and produced adipocytes with increased cell size. However, the gene expression changes from mESC-derived adipocytes were not observed or could not be investigated in the 3T3-L1 adipogenesis model.
4. Discussion
The availability of lipoma specimens from human MEN1 patients or from the mouse models of MEN1 and the availability of normal cells matched to lipoma are a challenge in the study of MEN1-associated lipoma. Here, we demonstrate the potential of using in vitro differentiation to derive menin-deficient and matched normal fat-cells (adipocytes) for such investigations. Using 2 different models of in vitro adipogenesis (mESCs and 3T3-L1 cells), we demonstrate that lack of menin or reduced level of menin did not affect the derivation of adipocytes. Interestingly, we observed that in both models the menin-deficient adipocytes were 1.5- to 1.7-fold larger compared with their WT/menin-containing control adipocytes and with a modest increase in lipid content which perhaps results from the increased cell size and not due to increased production of lipids. Gene expression analysis did not reveal any obviously relevant downstream effectors that could explain fat-cell hypertrophy. Analysis of these cells by posttranscriptional and proteomic approaches will be of interest.
Pparγ-induced in vitro adipogenesis was inefficient in producing adipocytes from immortalized Men1-KO mouse embryo fibroblasts (MEFs) or upon menin knockdown in 3T3-L1 cells [34]. The different methods used for in vitro differentiation in the previous study [34, 35] and in the present study [24, 29] could account for our successful derivation of adipocytes from Men1-KO mESC or from 3T3-L1 with menin knockdown. Similarly, menin inactivation by antisense oligonucleotides did not affect BMP-2-induced commitment of a mouse multipotential mesenchymal stem cell line (10T1/2) and mouse bone marrow stromal cell lines (ST2 and PA6) into the adipocyte lineage [36].
Men1-KO mESC-derived adipocytes showed downregulation of a few differentially methylated genes including the long noncoding RNA Meg3 and upregulation of most of the prolactin family genes. This observation could not be confirmed in the 3T3-L1 adipogenesis model. Meg3 was not expressed in 3T3-L1 or 3T3-L1-derived adipocytes and therefore further decrease from menin knockdown could not be assessed. Similarly, the prolactin family genes analyzed (n = 7) were either not expressed in WT or menin-deficient 3T3-L1-derived adipocytes or unaffected upon menin knockdown. The difference in gene expression in mESC or 3T3-L1-derived adipocytes could be attributed to their differentiation ability. Embryonic stem cells are multipotent and able to commit to different cell lineages, and 3T3-L1 cells are already committed to the adipocyte lineage [15, 24]. The reduced expression of several genes that are affected by differential DNA methylation highlights the involvement of menin in the regulation of DNA methylation at specific genes in the mESC-derived adipocytes.
We previously reported that menin loss in mESCs impaired H3K4me3 and gene expression at the Meg3 locus; and in mESC-derived pancreatic islet-like endocrine cells, menin loss impaired H3K4me3 and gene expression at the four Hox loci [18]. Also, in Men1-KO MEFs gene expression and H3K4me3 are significantly reduced at the four Hox loci [32]. Consistent with these data, in the present study, we found that, in mESC-derived adipocytes, menin loss increased gene expression from the prolactin gene family locus and decreased the expression of genes from the Meg3 locus. These observations suggest that the structural organization at loci with gene clusters is a target of menin to up- or downregulate gene expression. Gene rich chromatin domains that contain coordinately expressed genes in clusters such as the Hox genes are highly conserved in evolution [19]. However, the prolactin family genes are present in rodents and not in humans [22]. Therefore, the effect from menin loss on the expression of prolactin gene family is not relevant in the context of MEN1-associated human lipoma.
About 30% of MEN1 patients develop lipomas as one of the cutaneous manifestations of the MEN1 syndrome. These patients carry a heterozygous germline mutation in MEN1, and loss of the remaining normal copy of MEN1 has been documented in such MEN1-associated lipomas [5–9]. Our findings from in vitro differentiation studies in mouse cells that adipocytes can form despite menin deficiency are in agreement with the observation that lipomas resemble normal fat. However, how menin loss leads to localized increased fatty mass and tumor formation remains to be determined. Further studies of these benign fatty lesions could provide insights into the pathogenesis of MEN1-related lipomas and the growth of normal fat tissue.
5. Conclusion
In vitro adipogenesis showed that menin deficiency could result in fat-cell hypertrophy and differential gene expression from the methylated Meg3 locus and the prolactin gene family locus. Our data highlight the potential of two different in vitro experimental systems to study MEN1-associated lipoma biology and to investigate the mechanisms that govern fat-cell size, proliferation, and function.
Supplementary Material
Acknowledgments
The authors are grateful to Settara Chandrasekarappa of the NHGRI for kindly providing the WT and Men1-KO mESCs. They thank the National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK) genomics core facility (Chithra Keembiyehetty and Weiping Chen) for their advice and help in generating microarray data. This work was supported by the Intramural Research Program of the NIH, NIDDK (SKA; Project no. 1ZIADK075035-03). All the gene expression microarray data generated for this study are deposited in the NCBI GEO repository under accession no. GSE65859.
Conflict of Interests
The authors declare that there is no conflict of interests regarding the publication of this paper.
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