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Acta Crystallographica Section E: Crystallographic Communications logoLink to Acta Crystallographica Section E: Crystallographic Communications
. 2015 Jun 17;71(Pt 7):o492–o493. doi: 10.1107/S2056989015011263

Crystal structure of 5-(1-benzo­furan-2-yl)-3-(4-methyl­phen­yl)-4,5-di­hydro-1,2-oxazol-5-ol

A J Ravi a, A C Vinayaka b, S Jeyaseelan c, M P Sadashiva b, H C Devarajegowda a,*
PMCID: PMC4518973  PMID: 26279925

Abstract

In the title compound, C18H15NO3, the isoxazole moiety adopts a shallow envelope conformation, with the C atom bearing the OH group displaced by 0.148 (1) Å from the mean plane through the other four atoms. The mean plane of this ring (all atoms) subtends dihedral angles of 87.19 (6) and 15.51 (7)° with the benzo­furan ring system (r.m.s. deviation = 0.007 Å) and the 4-methylphenyl ring, respectively. In the crystal, mol­ecules are linked by O—H⋯N hydrogen bonds, generating [001] C(5) chains, with adjacent mol­ecules in the chain related by c-glide symmetry. Weak C—H⋯O inter­actions link the chains into a three-dimensional network.

Keywords: crystal structure; benzo­furan; 1,2-oxazole; alcohol; biological properties; pharmaceutical properties

Related literature  

For the biological and pharmaceutical properties of isoxazoles, see: Eddington et al. (2002); Lee et al. (2009); Rozman et al. (2002); Shin et al. (2005).graphic file with name e-71-0o492-scheme1.jpg

Experimental  

Crystal data  

  • C18H15NO3

  • M r = 293.31

  • Monoclinic, Inline graphic

  • a = 10.2200 (15) Å

  • b = 14.2289 (19) Å

  • c = 10.2474 (15) Å

  • β = 93.058 (7)°

  • V = 1488.1 (4) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.09 mm−1

  • T = 293 K

  • 0.30 × 0.25 × 0.20 mm

Data collection  

  • Bruker APEXII CCD diffractometer

  • 23993 measured reflections

  • 3452 independent reflections

  • 2829 reflections with I > 2σ(I)

  • R int = 0.047

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.044

  • wR(F 2) = 0.123

  • S = 1.03

  • 3452 reflections

  • 200 parameters

  • H-atom parameters constrained

  • Δρmax = 0.24 e Å−3

  • Δρmin = −0.18 e Å−3

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015011263/hb7438sup1.cif

e-71-0o492-sup1.cif (19.4KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015011263/hb7438Isup2.hkl

e-71-0o492-Isup2.hkl (169.3KB, hkl)

Supporting information file. DOI: 10.1107/S2056989015011263/hb7438Isup3.cml

. DOI: 10.1107/S2056989015011263/hb7438fig1.tif

Perspective diagram of the mol­ecule with 50% probability displacement ellipsoids.

a . DOI: 10.1107/S2056989015011263/hb7438fig2.tif

Packing diagram of the mol­ecule viewed down the a axis.

CCDC reference: 1405867

Additional supporting information: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (, ).

DHA DH HA D A DHA
O13H13N9i 0.82 2.17 2.9352(15) 156
C2H2O10ii 0.93 2.46 3.2328(17) 141
C7H7CO15iii 0.96 2.58 3.175(2) 121
C18H18O10i 0.93 2.54 3.4183(17) 158

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

supplementary crystallographic information

S1. Comment

Isoxazole derivatives bearing various substituents are known to have diverse biological and pharmaceutical activities; such as antiviral (Lee et al., 2009), anti-HIV activities (Shin et al., 2005) and anticonvulsant activity (Eddington et al., 2002). In addition, isoxazole derivative is used for the treatment of rheumatoid arthritis (Rozman et al., 2002). As part of our interest in these compounds, the title compound was chosen for the X-ray structure analysis.

In the molecular structure of the title compound (Fig. 1), the isoxazole moiety makes dihedral angles of 87.19 (6)° and 15.51 (7)° with benzofuran and phenyl ring, respectively. The dihedral angle between the benzofuran and phenyl ring is 81.67 (6)° The central isoxazole moiety adopts a slightly flattened envelope conformation with puckering parameter Q = 0.2406 (12) Å and φ = 183.41 (17)° , and the maximum deviation found on the puckered atom at C11 is -0.148 (1) Å. The crystal structure features C—H···O and O—H···N hydrogen bonds. The packing diagram of the molecule when viewed down the a axis as shown in Fig. 2.

S2. Experimental

A solution of 2 Eq. of K2CO3 in water (1 ml) was added to the stirred solution of 4 Eq. of N-hydroxyl-4-toluenesulfonamide in MeOH/H2O (5/1 ml). Then 1 Eq. of 1-Benzofuran-2-yl-3-p-tolyl-propenone was added and reaction mixture was allowed to stir at room temperature for overnight. After completion of reaction, the reaction mixture was diluted with EtOAc, washed with water and brine. The organic extract was dried and concentrated under reduced pressure to give crude product, which was further purified using column chromatography (60–120 silica gel) to afford pure product.

S3. Refinement

The H atoms were positioned geometrically and allowed to ride on their parent atom, with O–H distance is equal to 0.82 Å and C–H distance in the range of 0.93 to 0.97 Å; Uiso(H) = 1.2–1.5Ueq (carrier atom) for all H atoms.

Figures

Fig. 1.

Fig. 1.

Perspective diagram of the molecule with 50% probability displacement ellipsoids.

Fig. 2.

Fig. 2.

Packing diagram of the molecule viewed down the a axis.

Crystal data

C18H15NO3 F(000) = 616
Mr = 293.31 Dx = 1.309 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 3452 reflections
a = 10.2200 (15) Å θ = 2.0–27.6°
b = 14.2289 (19) Å µ = 0.09 mm1
c = 10.2474 (15) Å T = 293 K
β = 93.058 (7)° Block, light yellow
V = 1488.1 (4) Å3 0.30 × 0.25 × 0.20 mm
Z = 4

Data collection

Bruker APEXII CCD diffractometer Rint = 0.047
ω and φ scans θmax = 27.6°, θmin = 2.0°
23993 measured reflections h = −13→13
3452 independent reflections k = −18→18
2829 reflections with I > 2σ(I) l = −13→13

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.123 H-atom parameters constrained
S = 1.03 w = 1/[σ2(Fo2) + (0.0594P)2 + 0.3174P] where P = (Fo2 + 2Fc2)/3
3452 reflections (Δ/σ)max = 0.001
200 parameters Δρmax = 0.24 e Å3
0 restraints Δρmin = −0.18 e Å3

Special details

Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O10 0.10420 (9) 0.22693 (6) 1.16214 (9) 0.0469 (3)
O13 0.01366 (9) 0.15474 (6) 0.97218 (9) 0.0424 (3)
O15 0.34411 (9) 0.12845 (9) 1.11345 (9) 0.0560 (4)
N9 0.02005 (11) 0.20392 (8) 1.26398 (11) 0.0442 (3)
C1 −0.10566 (14) −0.02593 (9) 1.35272 (13) 0.0444 (4)
C2 −0.19545 (15) −0.06737 (10) 1.43143 (14) 0.0490 (5)
C3 −0.27405 (13) −0.01485 (10) 1.50880 (12) 0.0425 (4)
C4 −0.25865 (15) 0.08194 (11) 1.50733 (15) 0.0514 (5)
C5 −0.16973 (14) 0.12463 (10) 1.42932 (15) 0.0486 (4)
C6 −0.09233 (11) 0.07103 (8) 1.34970 (11) 0.0351 (3)
C7 −0.37282 (16) −0.06253 (12) 1.59045 (16) 0.0589 (5)
C8 −0.00193 (12) 0.11530 (8) 1.26170 (11) 0.0346 (3)
C11 0.10936 (12) 0.14692 (8) 1.07341 (12) 0.0352 (3)
C12 0.07217 (12) 0.06513 (8) 1.15977 (11) 0.0358 (3)
C14 0.24379 (12) 0.14657 (9) 1.02232 (12) 0.0374 (3)
C16 0.45719 (14) 0.13194 (11) 1.04688 (14) 0.0498 (5)
C17 0.42854 (13) 0.15256 (9) 0.91647 (13) 0.0434 (4)
C18 0.28814 (13) 0.16133 (10) 0.90353 (13) 0.0431 (4)
C19 0.58217 (16) 0.11677 (16) 1.09931 (19) 0.0757 (7)
C20 0.68147 (16) 0.12359 (15) 1.0141 (2) 0.0747 (7)
C21 0.65735 (16) 0.14460 (13) 0.8845 (2) 0.0670 (6)
C22 0.53186 (17) 0.15950 (12) 0.83303 (17) 0.0608 (6)
H1 −0.05400 −0.06330 1.30160 0.0530*
H2 −0.20290 −0.13250 1.43210 0.0590*
H4 −0.30920 0.11890 1.56000 0.0620*
H5 −0.16150 0.18970 1.43000 0.0580*
H7A −0.44440 −0.08530 1.53470 0.0880*
H7B −0.40510 −0.01840 1.65190 0.0880*
H7C −0.33190 −0.11430 1.63680 0.0880*
H12A 0.01720 0.02000 1.11180 0.0430*
H12B 0.14910 0.03350 1.19800 0.0430*
H13 0.02420 0.20390 0.93240 0.0640*
H18 0.23800 0.17470 0.82740 0.0520*
H19 0.59860 0.10270 1.18730 0.0910*
H20 0.76740 0.11370 1.04540 0.0900*
H21 0.72720 0.14890 0.83020 0.0800*
H22 0.51630 0.17380 0.74500 0.0730*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O10 0.0539 (6) 0.0394 (5) 0.0492 (5) −0.0152 (4) 0.0203 (4) −0.0082 (4)
O13 0.0359 (5) 0.0471 (5) 0.0441 (5) −0.0045 (4) 0.0002 (4) 0.0092 (4)
O15 0.0352 (5) 0.0961 (8) 0.0367 (5) −0.0054 (5) 0.0013 (4) 0.0150 (5)
N9 0.0475 (6) 0.0416 (6) 0.0451 (6) −0.0103 (5) 0.0175 (5) −0.0081 (4)
C1 0.0504 (8) 0.0395 (7) 0.0445 (7) 0.0007 (5) 0.0132 (6) −0.0021 (5)
C2 0.0581 (9) 0.0389 (7) 0.0508 (8) −0.0041 (6) 0.0115 (7) 0.0050 (6)
C3 0.0395 (7) 0.0531 (8) 0.0351 (6) −0.0041 (5) 0.0029 (5) 0.0083 (5)
C4 0.0497 (8) 0.0542 (8) 0.0522 (8) −0.0015 (6) 0.0213 (7) −0.0052 (6)
C5 0.0519 (8) 0.0382 (6) 0.0576 (8) −0.0040 (6) 0.0204 (7) −0.0060 (6)
C6 0.0332 (6) 0.0400 (6) 0.0322 (6) −0.0031 (5) 0.0033 (5) −0.0007 (5)
C7 0.0548 (9) 0.0719 (10) 0.0509 (8) −0.0084 (7) 0.0120 (7) 0.0170 (7)
C8 0.0340 (6) 0.0375 (6) 0.0323 (6) −0.0035 (5) 0.0029 (5) −0.0026 (4)
C11 0.0346 (6) 0.0371 (6) 0.0340 (6) −0.0041 (5) 0.0035 (5) −0.0021 (4)
C12 0.0385 (6) 0.0357 (6) 0.0337 (6) −0.0023 (5) 0.0064 (5) −0.0014 (5)
C14 0.0348 (6) 0.0435 (6) 0.0338 (6) −0.0034 (5) 0.0012 (5) 0.0015 (5)
C16 0.0354 (7) 0.0679 (9) 0.0464 (8) −0.0041 (6) 0.0055 (6) 0.0068 (6)
C17 0.0405 (7) 0.0481 (7) 0.0422 (7) 0.0003 (5) 0.0085 (6) −0.0001 (5)
C18 0.0394 (7) 0.0565 (8) 0.0337 (6) 0.0036 (6) 0.0040 (5) 0.0018 (5)
C19 0.0392 (9) 0.1234 (17) 0.0637 (11) −0.0029 (9) −0.0044 (8) 0.0191 (11)
C20 0.0354 (8) 0.0994 (14) 0.0893 (14) −0.0008 (8) 0.0036 (8) 0.0033 (11)
C21 0.0447 (9) 0.0773 (12) 0.0813 (12) −0.0022 (7) 0.0260 (8) −0.0039 (9)
C22 0.0543 (9) 0.0773 (11) 0.0528 (9) 0.0024 (8) 0.0203 (7) 0.0011 (8)

Geometric parameters (Å, º)

O10—N9 1.4254 (15) C16—C17 1.384 (2)
O10—C11 1.4597 (15) C17—C18 1.4394 (19)
O13—C11 1.3917 (15) C17—C22 1.397 (2)
O15—C14 1.3739 (16) C19—C20 1.377 (3)
O15—C16 1.3739 (17) C20—C21 1.371 (3)
O13—H13 0.8200 C21—C22 1.377 (2)
N9—C8 1.2808 (16) C1—H1 0.9300
C1—C2 1.385 (2) C2—H2 0.9300
C1—C6 1.3869 (17) C4—H4 0.9300
C2—C3 1.379 (2) C5—H5 0.9300
C3—C4 1.386 (2) C7—H7A 0.9600
C3—C7 1.507 (2) C7—H7B 0.9600
C4—C5 1.383 (2) C7—H7C 0.9600
C5—C6 1.3935 (19) C12—H12A 0.9700
C6—C8 1.4671 (16) C12—H12B 0.9700
C8—C12 1.5028 (17) C18—H18 0.9300
C11—C14 1.4961 (18) C19—H19 0.9300
C11—C12 1.5225 (17) C20—H20 0.9300
C14—C18 1.3380 (18) C21—H21 0.9300
C16—C19 1.376 (2) C22—H22 0.9300
N9—O10—C11 108.67 (9) C16—C19—C20 116.20 (17)
C14—O15—C16 105.83 (10) C19—C20—C21 121.95 (16)
C11—O13—H13 109.00 C20—C21—C22 121.36 (16)
O10—N9—C8 108.96 (10) C17—C22—C21 118.27 (16)
C2—C1—C6 120.35 (12) C2—C1—H1 120.00
C1—C2—C3 121.91 (13) C6—C1—H1 120.00
C2—C3—C4 117.54 (13) C1—C2—H2 119.00
C4—C3—C7 122.23 (13) C3—C2—H2 119.00
C2—C3—C7 120.24 (13) C3—C4—H4 119.00
C3—C4—C5 121.42 (14) C5—C4—H4 119.00
C4—C5—C6 120.61 (13) C4—C5—H5 120.00
C1—C6—C5 118.16 (11) C6—C5—H5 120.00
C1—C6—C8 120.44 (11) C3—C7—H7A 109.00
C5—C6—C8 121.38 (11) C3—C7—H7B 109.00
N9—C8—C6 121.81 (11) C3—C7—H7C 109.00
N9—C8—C12 112.70 (11) H7A—C7—H7B 109.00
C6—C8—C12 125.48 (10) H7A—C7—H7C 109.00
O10—C11—C12 102.46 (9) H7B—C7—H7C 109.00
O10—C11—C14 106.56 (10) C8—C12—H12A 112.00
O10—C11—O13 110.77 (9) C8—C12—H12B 112.00
O13—C11—C14 111.19 (10) C11—C12—H12A 112.00
C12—C11—C14 117.60 (10) C11—C12—H12B 112.00
O13—C11—C12 107.88 (10) H12A—C12—H12B 109.00
C8—C12—C11 101.05 (9) C14—C18—H18 127.00
O15—C14—C18 111.78 (11) C17—C18—H18 127.00
C11—C14—C18 132.83 (12) C16—C19—H19 122.00
O15—C14—C11 115.38 (10) C20—C19—H19 122.00
O15—C16—C17 110.29 (12) C19—C20—H20 119.00
C17—C16—C19 123.67 (14) C21—C20—H20 119.00
O15—C16—C19 126.04 (14) C20—C21—H21 119.00
C16—C17—C18 105.42 (12) C22—C21—H21 119.00
C18—C17—C22 136.03 (13) C17—C22—H22 121.00
C16—C17—C22 118.55 (13) C21—C22—H22 121.00
C14—C18—C17 106.68 (12)
C11—O10—N9—C8 13.54 (13) C6—C8—C12—C11 161.79 (11)
N9—O10—C11—O13 91.49 (11) O10—C11—C12—C8 23.18 (11)
N9—O10—C11—C12 −23.35 (12) O13—C11—C12—C8 −93.75 (11)
N9—O10—C11—C14 −147.45 (9) C14—C11—C12—C8 139.58 (11)
C16—O15—C14—C11 −179.68 (12) O10—C11—C14—O15 66.25 (13)
C16—O15—C14—C18 −0.19 (16) O10—C11—C14—C18 −113.10 (16)
C14—O15—C16—C17 0.43 (16) O13—C11—C14—O15 −172.95 (11)
C14—O15—C16—C19 −179.12 (17) O13—C11—C14—C18 7.7 (2)
O10—N9—C8—C6 −175.99 (10) C12—C11—C14—O15 −47.91 (16)
O10—N9—C8—C12 3.06 (14) C12—C11—C14—C18 132.74 (15)
C6—C1—C2—C3 0.0 (2) O15—C14—C18—C17 −0.11 (16)
C2—C1—C6—C5 1.11 (19) C11—C14—C18—C17 179.27 (13)
C2—C1—C6—C8 −177.02 (12) O15—C16—C17—C18 −0.49 (16)
C1—C2—C3—C4 −1.2 (2) O15—C16—C17—C22 179.71 (13)
C1—C2—C3—C7 178.48 (13) C19—C16—C17—C18 179.07 (17)
C2—C3—C4—C5 1.3 (2) C19—C16—C17—C22 −0.7 (2)
C7—C3—C4—C5 −178.39 (14) O15—C16—C19—C20 179.82 (17)
C3—C4—C5—C6 −0.2 (2) C17—C16—C19—C20 0.3 (3)
C4—C5—C6—C1 −1.0 (2) C16—C17—C18—C14 0.36 (16)
C4—C5—C6—C8 177.08 (13) C22—C17—C18—C14 −179.89 (16)
C1—C6—C8—N9 −174.48 (12) C16—C17—C22—C21 0.6 (2)
C1—C6—C8—C12 6.60 (18) C18—C17—C22—C21 −179.14 (16)
C5—C6—C8—N9 7.46 (19) C16—C19—C20—C21 0.2 (3)
C5—C6—C8—C12 −171.46 (12) C19—C20—C21—C22 −0.3 (3)
N9—C8—C12—C11 −17.21 (13) C20—C21—C22—C17 −0.1 (3)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
O13—H13···N9i 0.82 2.17 2.9352 (15) 156
C2—H2···O10ii 0.93 2.46 3.2328 (17) 141
C7—H7C···O15iii 0.96 2.58 3.175 (2) 121
C18—H18···O10i 0.93 2.54 3.4183 (17) 158

Symmetry codes: (i) x, −y+1/2, z−1/2; (ii) −x, y−1/2, −z+5/2; (iii) −x, −y, −z+3.

Footnotes

Supporting information for this paper is available from the IUCr electronic archives (Reference: HB7438).

References

  1. Bruker (2009). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Eddington, N. D., Cox, D. S., Roberts, R. R., Butcher, R. J., Edafiogho, I. O., Stables, J. P., Cooke, N., Goodwin, A. M., Smith, C. A. & Scott, K. R. (2002). Eur. J. Med. Chem. 37, 635–648. [DOI] [PubMed]
  3. Lee, Y., Park, S. M. & Kim, B. H. (2009). Bioorg. Med. Chem. Lett. 19, 1126–1128. [DOI] [PMC free article] [PubMed]
  4. Rozman, B., Praprotnik, S., Logar, D., Tomsic, M., Hojnik, M., Kos-Golja, M., Accetto, R. & Dolenc, P. (2002). Ann. Rheum. Dis. 61, 567–569. [DOI] [PMC free article] [PubMed]
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  6. Shin, K. D., Lee, M. Y., Shin, D. S., Lee, S., Son, K. H., Koh, S., Paik, Y. K., Kwon, B. M. & Han, D. C. (2005). J. Biol. Chem. 280, 41439–41448. [DOI] [PubMed]
  7. Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015011263/hb7438sup1.cif

e-71-0o492-sup1.cif (19.4KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015011263/hb7438Isup2.hkl

e-71-0o492-Isup2.hkl (169.3KB, hkl)

Supporting information file. DOI: 10.1107/S2056989015011263/hb7438Isup3.cml

. DOI: 10.1107/S2056989015011263/hb7438fig1.tif

Perspective diagram of the mol­ecule with 50% probability displacement ellipsoids.

a . DOI: 10.1107/S2056989015011263/hb7438fig2.tif

Packing diagram of the mol­ecule viewed down the a axis.

CCDC reference: 1405867

Additional supporting information: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Crystallographic Communications are provided here courtesy of International Union of Crystallography

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