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Acta Crystallographica Section E: Crystallographic Communications logoLink to Acta Crystallographica Section E: Crystallographic Communications
. 2015 Jun 27;71(Pt 7):o516–o517. doi: 10.1107/S2056989015011536

Crystal structure of 2-amino-4-phenyl-4H-benzo[h]chromene-3-carbo­nitrile

Shaaban K Mohamed a,b, Peter N Horton c, Mehmet Akkurt d, Sabry H H Younes e, Mustafa R Albayati f,*
PMCID: PMC4518988  PMID: 26279939

Abstract

In the title compound, C20H14N2O, the plane of the phenyl ring is almost normal to that of the naphthalene ring system, forming a dihedral angle of 83.15 (8)°. The 4H-pyran ring fused with the naphthalene ring system has a flattened boat conformation. In the crystal, mol­ecules are linked by pairs of N—H⋯N hydrogen bonds, forming inversion dimers with an R 2 2(12) ring motif. The dimers are connected by C—H⋯π inter­actions, forming supra­molecular chains along [010].

Keywords: crystal structure, amino­chromene, fused chromene, hydrogen bonding, C—H⋯π inter­actions

Related literature  

For synthesis of chromene-containing compounds, see: Elagamey et al. (1988); El-Maghraby (2014). For industrial applications of amino­chromenes, see: Ellis (1977); Hafez et al. (1987). For various biological activities of fused chromenes, see: Hiramoto et al. (1997); Bianchi & Tava (1987); Eiden & Denk (1991); Smith et al. (1998); Taylor et al. (1998). For the crystal structure of the isomer of the title compound, 3-amino-1-phenyl-1H-benzo[f]chromene-2-carbo­nitrile, see: Akkurt et al. (2013).graphic file with name e-71-0o516-scheme1.jpg

Experimental  

Crystal data  

  • C20H14N2O

  • M r = 298.33

  • Monoclinic, Inline graphic

  • a = 9.1662 (1) Å

  • b = 5.7246 (1) Å

  • c = 13.9177 (2) Å

  • β = 90.153 (1)°

  • V = 730.30 (2) Å3

  • Z = 2

  • Cu Kα radiation

  • μ = 0.67 mm−1

  • T = 100 K

  • 0.28 × 0.13 × 0.10 mm

Data collection  

  • Rigaku AFC11 diffractometer

  • Absorption correction: multi-scan (CrystalClear-SM Expert; Rigaku, 2012) T min = 0.883, T max = 1.000

  • 5778 measured reflections

  • 2201 independent reflections

  • 2184 reflections with I > 2σ(I)

  • R int = 0.029

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.031

  • wR(F 2) = 0.093

  • S = 1.09

  • 2201 reflections

  • 216 parameters

  • 1 restraint

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.14 e Å−3

  • Δρmin = −0.15 e Å−3

  • Absolute structure: Flack x determined using 775 quotients [(I +)−(I )]/[(I +)+(I )] (Parsons et al., 2013)

  • Absolute structure parameter: 0.2 (3)

Data collection: CrystalClearSM Expert (Rigaku, 2012); cell refinement: CrystalClearSM Expert; data reduction: CrystalClearSM Expert; program(s) used to solve structure: SUPERFLIP (Palatinus & Chapuis, 2007); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: WinGX (Farrugia, 2012).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015011536/tk5369sup1.cif

e-71-0o516-sup1.cif (211.4KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015011536/tk5369Isup2.hkl

e-71-0o516-Isup2.hkl (121.1KB, hkl)

Supporting information file. DOI: 10.1107/S2056989015011536/tk5369Isup3.cml

. DOI: 10.1107/S2056989015011536/tk5369fig1.tif

View of the title compound with the atom-numbering scheme. Displacement ellipsoids for non-H atoms are drawn at the 50% probability level.

. DOI: 10.1107/S2056989015011536/tk5369fig2.tif

View of the dimers formed by N—H⋯O hydrogen bonds.

CCDC reference: 1406770

Additional supporting information: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (, ).

Cg1 is the centroid of the C15C20 phenyl ring.

DHA DH HA D A DHA
N1H1BN2i 0.91(3) 2.09(3) 2.970(2) 163(3)
C9H9Cg1ii 0.95 2.88 3.574(2) 131

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The authors would like to express their thanks to the National Crystallography Service, Southampton, UK, for providing the X-ray data.

supplementary crystallographic information

S1. Comment

Among synthetic heterocyclic compounds, aminochromenes represent an important class of organic compounds being the main components of many naturally occurring products (Elagamey et al., 1988; El-Maghraby, 2014). They are used for the chemical synthesis of cosmetics, pigments (Ellis, 1977), and potentially biodegradable agrochemicals (Hafez, et al., 1987). Fused chromene systems have displayed a broad spectrum of biological activities such as mutagenicity (Hiramoto, et al., 1997), sex pheromonal (Bianchi & Tava, 1987), central nervous system (CNS) activities (Eiden & Denk, 1991) and inhibitors for influenza virus sialidases (Smith et al., 1998; Taylor et al., 1998). In this context and following our strategy for the synthesis of bio-active molecules, we herein report the synthesis and crystal structure of the title compound.

As seen in Fig. 1, the C4–C13 naphthalene ring system of the title compound is essentially planar [maximum deviations = -0.020 (2) Å for C4 and -0.016 (2) Å for C8]. The C15–C20 phenyl ring makes a dihedral angle of 83.15 (8)° with the mean plane of the naphthalene ring. The 4H-pyran ring (O1/C1–C4/C13) in the title compound is puckered [the puckering parameters (Cremer & Pople, 1975) are QT = 0.177 (2) Å, θ = 98.2 (6) ° and φ = 342.9 (7) °. The structural geometric parameters of the title compound are normal and are consistent with those of the isomer compound 3-amino-1-phenyl-1H-benzo[f]chromene-2-carbonitrile (Akkurt et al., 2013). Both isomers crystallizes in the same monoclinic space group P21 and their unit-cell parameters are almost equal.

In the crystal, pairs of N—H···N hydrogen bonds form inversion dimers with an R22(12) ring motif (Table 1 and Fig. 2). In addition, C—H···π interactions are observed.

S2. Experimental

To a solution of 1-naphthol (144 mg; 1 mmol) in 10 ml absolute ethanol, an equimolar amount of benzylidene-malononitrile (154 mg; 1 mmol) was added with constant stirring. The reaction mixture was refluxed for 3 h in the presence of a catalytic amount of piperidine. The reaction progress was monitored by TLC and after cooling, the formed precipitate was filtered off, washed with cold ethanol and dried under vacuum in a desiccator for 24 h. The solid was recrystallized from ethanol. Crystals suitable for X-ray crystallography were obtained by slow evaporation of a solution of the title compound in ethanol (yield 92%; m.p. 483 K).

S3. Refinement

The H atoms of the NH2 group were were refined. The H atoms attached to the C atoms were positioned geometrically, with C—H = 0.95 Å and C—H = 1.00 Å for aromatic and methine H, respectively, and with Uiso(H) = 1.2Ueq(C).

Figures

Fig. 1.

Fig. 1.

View of the title compound with the atom-numbering scheme. Displacement ellipsoids for non-H atoms are drawn at the 50% probability level.

Fig. 2.

Fig. 2.

View of the dimers formed by N—H···O hydrogen bonds.

Crystal data

C20H14N2O F(000) = 312
Mr = 298.33 Dx = 1.357 Mg m3
Monoclinic, P21 Cu Kα radiation, λ = 1.54178 Å
Hall symbol: P 2yb Cell parameters from 5573 reflections
a = 9.1662 (1) Å θ = 6.3–66.6°
b = 5.7246 (1) Å µ = 0.67 mm1
c = 13.9177 (2) Å T = 100 K
β = 90.153 (1)° Block, brown
V = 730.30 (2) Å3 0.28 × 0.13 × 0.10 mm
Z = 2

Data collection

Rigaku AFC11 diffractometer 2201 independent reflections
Radiation source: Rotating Anode 2184 reflections with I > 2σ(I)
Detector resolution: 22.2222 pixels mm-1 Rint = 0.029
profile data from ω–scans θmax = 66.7°, θmin = 4.8°
Absorption correction: multi-scan (CrystalClear-SM Expert; Rigaku, 2012) h = −10→10
Tmin = 0.883, Tmax = 1.000 k = −6→6
5778 measured reflections l = −16→16

Refinement

Refinement on F2 Hydrogen site location: mixed
Least-squares matrix: full H atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.031 w = 1/[σ2(FO2) + (0.0642P)2 + 0.1186P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.093 (Δ/σ)max < 0.001
S = 1.09 Δρmax = 0.14 e Å3
2201 reflections Δρmin = −0.15 e Å3
216 parameters Absolute structure: Flack x determined using 775 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013)
1 restraint Absolute structure parameter: 0.2 (3)

Special details

Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.64120 (15) 0.8755 (3) 0.32053 (9) 0.0250 (4)
N1 0.5228 (2) 0.9831 (4) 0.18837 (13) 0.0279 (6)
N2 0.58898 (19) 0.5238 (4) 0.01142 (12) 0.0305 (6)
C1 0.6097 (2) 0.8195 (4) 0.22720 (13) 0.0223 (5)
C2 0.6647 (2) 0.6252 (4) 0.18462 (14) 0.0228 (6)
C3 0.7792 (2) 0.4700 (4) 0.23142 (13) 0.0222 (6)
C4 0.7851 (2) 0.5235 (4) 0.33777 (13) 0.0225 (6)
C5 0.8612 (2) 0.3703 (4) 0.40074 (14) 0.0264 (6)
C6 0.8631 (2) 0.4068 (4) 0.49782 (15) 0.0286 (6)
C7 0.7877 (2) 0.5997 (4) 0.53815 (14) 0.0255 (6)
C8 0.7844 (2) 0.6408 (5) 0.63859 (14) 0.0297 (6)
C9 0.7137 (2) 0.8309 (5) 0.67554 (14) 0.0301 (6)
C10 0.6403 (2) 0.9868 (5) 0.61433 (15) 0.0307 (6)
C11 0.6388 (2) 0.9514 (4) 0.51680 (14) 0.0275 (6)
C12 0.7134 (2) 0.7592 (4) 0.47686 (14) 0.0239 (6)
C13 0.7165 (2) 0.7126 (4) 0.37642 (13) 0.0226 (6)
C14 0.6217 (2) 0.5720 (4) 0.08901 (13) 0.0241 (6)
C15 0.9263 (2) 0.4943 (4) 0.18151 (13) 0.0222 (6)
C16 0.9754 (2) 0.3182 (4) 0.12136 (13) 0.0261 (6)
C17 1.1057 (2) 0.3423 (5) 0.07107 (14) 0.0301 (6)
C18 1.1876 (2) 0.5433 (5) 0.08102 (14) 0.0301 (6)
C19 1.1396 (2) 0.7208 (5) 0.14112 (14) 0.0293 (6)
C20 1.0097 (2) 0.6961 (4) 0.19070 (14) 0.0260 (6)
H1A 0.474 (3) 1.088 (5) 0.2297 (18) 0.034 (7)*
H1B 0.501 (3) 0.971 (6) 0.125 (2) 0.040 (7)*
H3 0.74660 0.30430 0.22390 0.0270*
H5 0.91180 0.24000 0.37480 0.0320*
H6 0.91520 0.30260 0.53850 0.0340*
H8 0.83200 0.53470 0.68080 0.0360*
H9 0.71420 0.85760 0.74290 0.0360*
H10 0.59130 1.11800 0.64070 0.0370*
H11 0.58740 1.05650 0.47620 0.0330*
H16 0.91940 0.17950 0.11430 0.0310*
H17 1.13830 0.22050 0.03000 0.0360*
H18 1.27650 0.56020 0.04680 0.0360*
H19 1.19580 0.85910 0.14820 0.0350*
H20 0.97710 0.81850 0.23150 0.0310*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0306 (8) 0.0258 (8) 0.0186 (6) 0.0031 (7) −0.0059 (5) −0.0008 (6)
N1 0.0309 (9) 0.0322 (11) 0.0205 (9) 0.0045 (9) −0.0056 (7) −0.0012 (8)
N2 0.0297 (9) 0.0375 (12) 0.0243 (9) 0.0007 (9) −0.0046 (7) −0.0041 (8)
C1 0.0219 (9) 0.0273 (11) 0.0178 (8) −0.0041 (9) −0.0026 (7) 0.0026 (8)
C2 0.0202 (9) 0.0293 (12) 0.0190 (9) −0.0025 (9) −0.0022 (7) 0.0002 (8)
C3 0.0226 (9) 0.0205 (10) 0.0236 (10) −0.0015 (9) −0.0021 (7) −0.0009 (8)
C4 0.0191 (9) 0.0272 (12) 0.0213 (9) −0.0039 (8) −0.0007 (7) 0.0010 (8)
C5 0.0249 (9) 0.0270 (12) 0.0272 (10) 0.0003 (10) 0.0001 (7) 0.0025 (9)
C6 0.0276 (10) 0.0325 (13) 0.0256 (10) −0.0010 (10) −0.0044 (8) 0.0074 (9)
C7 0.0220 (9) 0.0321 (12) 0.0223 (9) −0.0050 (9) −0.0013 (7) 0.0029 (9)
C8 0.0259 (10) 0.0414 (14) 0.0219 (9) −0.0058 (10) −0.0031 (8) 0.0058 (9)
C9 0.0275 (10) 0.0427 (14) 0.0200 (9) −0.0106 (11) 0.0002 (7) −0.0028 (10)
C10 0.0296 (10) 0.0356 (13) 0.0268 (10) −0.0044 (11) 0.0024 (8) −0.0060 (9)
C11 0.0280 (10) 0.0298 (12) 0.0246 (10) −0.0018 (10) −0.0018 (8) −0.0021 (9)
C12 0.0202 (9) 0.0301 (12) 0.0214 (9) −0.0064 (9) −0.0012 (7) 0.0006 (8)
C13 0.0214 (9) 0.0251 (11) 0.0213 (9) −0.0029 (9) −0.0031 (7) 0.0036 (8)
C14 0.0226 (9) 0.0263 (11) 0.0235 (10) −0.0010 (9) 0.0001 (7) 0.0003 (9)
C15 0.0227 (10) 0.0265 (11) 0.0173 (8) 0.0004 (9) −0.0025 (7) 0.0029 (8)
C16 0.0301 (10) 0.0250 (12) 0.0231 (9) 0.0024 (10) −0.0032 (7) −0.0016 (8)
C17 0.0319 (11) 0.0346 (13) 0.0238 (9) 0.0069 (10) 0.0008 (7) −0.0020 (10)
C18 0.0245 (10) 0.0429 (14) 0.0230 (9) 0.0041 (10) 0.0002 (7) 0.0067 (9)
C19 0.0264 (10) 0.0328 (12) 0.0286 (10) −0.0040 (10) −0.0030 (8) 0.0056 (9)
C20 0.0274 (10) 0.0263 (12) 0.0244 (10) 0.0001 (10) −0.0001 (8) −0.0024 (9)

Geometric parameters (Å, º)

O1—C1 1.368 (2) C11—C12 1.410 (3)
O1—C13 1.396 (3) C12—C13 1.424 (3)
N1—C1 1.342 (3) C15—C20 1.391 (3)
N2—C14 1.154 (3) C15—C16 1.386 (3)
C1—C2 1.358 (3) C16—C17 1.393 (3)
N1—H1B 0.91 (3) C17—C18 1.381 (4)
N1—H1A 0.95 (3) C18—C19 1.388 (3)
C2—C14 1.420 (3) C19—C20 1.385 (3)
C2—C3 1.520 (3) C3—H3 1.0000
C3—C4 1.512 (3) C5—H5 0.9500
C3—C15 1.525 (3) C6—H6 0.9500
C4—C13 1.363 (3) C8—H8 0.9500
C4—C5 1.422 (3) C9—H9 0.9500
C5—C6 1.367 (3) C10—H10 0.9500
C6—C7 1.419 (3) C11—H11 0.9500
C7—C12 1.422 (3) C16—H16 0.9500
C7—C8 1.418 (3) C17—H17 0.9500
C8—C9 1.368 (4) C18—H18 0.9500
C9—C10 1.404 (3) C19—H19 0.9500
C10—C11 1.373 (3) C20—H20 0.9500
C1—O1—C13 118.39 (17) C3—C15—C20 121.36 (18)
O1—C1—N1 110.02 (18) C16—C15—C20 118.70 (17)
O1—C1—C2 121.91 (18) C15—C16—C17 120.8 (2)
N1—C1—C2 128.06 (18) C16—C17—C18 119.9 (2)
C1—N1—H1B 118 (2) C17—C18—C19 119.82 (18)
H1A—N1—H1B 123 (3) C18—C19—C20 120.0 (2)
C1—N1—H1A 118.7 (16) C15—C20—C19 120.8 (2)
C1—C2—C3 123.25 (17) C2—C3—H3 108.00
C1—C2—C14 118.83 (19) C4—C3—H3 108.00
C3—C2—C14 117.76 (18) C15—C3—H3 108.00
C2—C3—C15 111.21 (16) C4—C5—H5 119.00
C4—C3—C15 113.46 (15) C6—C5—H5 119.00
C2—C3—C4 108.89 (17) C5—C6—H6 120.00
C3—C4—C13 122.12 (18) C7—C6—H6 120.00
C3—C4—C5 119.65 (19) C7—C8—H8 120.00
C5—C4—C13 118.21 (17) C9—C8—H8 120.00
C4—C5—C6 121.3 (2) C8—C9—H9 120.00
C5—C6—C7 120.32 (19) C10—C9—H9 120.00
C8—C7—C12 118.3 (2) C9—C10—H10 120.00
C6—C7—C8 122.1 (2) C11—C10—H10 120.00
C6—C7—C12 119.69 (18) C10—C11—H11 120.00
C7—C8—C9 120.9 (2) C12—C11—H11 120.00
C8—C9—C10 120.29 (19) C15—C16—H16 120.00
C9—C10—C11 120.6 (2) C17—C16—H16 120.00
C10—C11—C12 120.1 (2) C16—C17—H17 120.00
C11—C12—C13 122.97 (19) C18—C17—H17 120.00
C7—C12—C11 119.76 (18) C17—C18—H18 120.00
C7—C12—C13 117.26 (19) C19—C18—H18 120.00
O1—C13—C12 114.26 (18) C18—C19—H19 120.00
O1—C13—C4 122.59 (16) C20—C19—H19 120.00
C4—C13—C12 123.14 (19) C15—C20—H20 120.00
N2—C14—C2 178.3 (2) C19—C20—H20 120.00
C3—C15—C16 119.85 (19)
C13—O1—C1—N1 172.70 (17) C4—C5—C6—C7 0.3 (3)
C13—O1—C1—C2 −8.3 (3) C5—C6—C7—C8 178.6 (2)
C1—O1—C13—C4 13.6 (3) C5—C6—C7—C12 −1.8 (3)
C1—O1—C13—C12 −165.44 (17) C6—C7—C8—C9 178.5 (2)
O1—C1—C2—C3 −7.7 (3) C12—C7—C8—C9 −1.1 (3)
O1—C1—C2—C14 176.97 (18) C6—C7—C12—C11 −179.80 (18)
N1—C1—C2—C3 171.1 (2) C6—C7—C12—C13 1.3 (3)
N1—C1—C2—C14 −4.2 (3) C8—C7—C12—C11 −0.2 (3)
C1—C2—C3—C4 16.6 (3) C8—C7—C12—C13 −179.15 (19)
C1—C2—C3—C15 −109.1 (2) C7—C8—C9—C10 1.3 (3)
C14—C2—C3—C4 −168.01 (18) C8—C9—C10—C11 −0.2 (3)
C14—C2—C3—C15 66.3 (2) C9—C10—C11—C12 −1.1 (3)
C2—C3—C4—C5 167.12 (18) C10—C11—C12—C7 1.3 (3)
C2—C3—C4—C13 −11.3 (3) C10—C11—C12—C13 −179.9 (2)
C15—C3—C4—C5 −68.5 (3) C7—C12—C13—O1 179.84 (17)
C15—C3—C4—C13 113.1 (2) C7—C12—C13—C4 0.8 (3)
C2—C3—C15—C16 −105.1 (2) C11—C12—C13—O1 0.9 (3)
C2—C3—C15—C20 71.3 (2) C11—C12—C13—C4 −178.1 (2)
C4—C3—C15—C16 131.7 (2) C3—C15—C16—C17 176.54 (18)
C4—C3—C15—C20 −51.9 (3) C20—C15—C16—C17 0.1 (3)
C3—C4—C5—C6 −176.86 (18) C3—C15—C20—C19 −176.69 (18)
C13—C4—C5—C6 1.6 (3) C16—C15—C20—C19 −0.3 (3)
C3—C4—C13—O1 −2.7 (3) C15—C16—C17—C18 0.1 (3)
C3—C4—C13—C12 176.26 (18) C16—C17—C18—C19 −0.1 (3)
C5—C4—C13—O1 178.81 (18) C17—C18—C19—C20 −0.2 (3)
C5—C4—C13—C12 −2.2 (3) C18—C19—C20—C15 0.3 (3)

Hydrogen-bond geometry (Å, º)

Cg1 is the centroid of the C15–C20 phenyl ring.

D—H···A D—H H···A D···A D—H···A
N1—H1B···N2i 0.91 (3) 2.09 (3) 2.970 (2) 163 (3)
C9—H9···Cg1ii 0.95 2.88 3.574 (2) 131

Symmetry codes: (i) −x+1, y+1/2, −z; (ii) −x+2, y+1/2, −z+1.

Footnotes

Supporting information for this paper is available from the IUCr electronic archives (Reference: TK5369).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015011536/tk5369sup1.cif

e-71-0o516-sup1.cif (211.4KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015011536/tk5369Isup2.hkl

e-71-0o516-Isup2.hkl (121.1KB, hkl)

Supporting information file. DOI: 10.1107/S2056989015011536/tk5369Isup3.cml

. DOI: 10.1107/S2056989015011536/tk5369fig1.tif

View of the title compound with the atom-numbering scheme. Displacement ellipsoids for non-H atoms are drawn at the 50% probability level.

. DOI: 10.1107/S2056989015011536/tk5369fig2.tif

View of the dimers formed by N—H⋯O hydrogen bonds.

CCDC reference: 1406770

Additional supporting information: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Crystallographic Communications are provided here courtesy of International Union of Crystallography

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