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International Journal of Clinical and Experimental Pathology logoLink to International Journal of Clinical and Experimental Pathology
. 2015 Jun 1;8(6):7341–7349.

Association of NCOA2 gene polymorphisms with obesity and dyslipidemia in the Chinese Han population

Yuping Lu 1,*, Tsadik Ghebreamlak Habtetsion 2,*, Yong Li 1, Huiping Zhang 3, Yichun Qiao 1, Mingxi Yu 1, Yuan Tang 1, Qing Zhen 1, Yi Cheng 2, Yawen Liu 1
PMCID: PMC4525968  PMID: 26261634

Abstract

Background: Nuclear receptor coactivator 2 (NCOA2) gene plays an important role in adipogenesis and lipid metabolism. NCOA2 gene null mice exhibited less fat accumulation and lower serum lipid levels, and were protected against obesity. Few studies are known to have analyzed the association of NCOA2 gene single nucleotide polymorphisms with obesity and serum lipid profile. Our study aimed to evaluate the association of NCOA2 gene polymorphisms with the risk of obesity and dyslipidemia in the Chinese Han population. Methods: Two NCOA2 gene polymorphisms (rs41391448 and rs10504473) were selected and genotyped in a Chinese Han cohort with 529 participants. The effect of different genotypes on BMI and serum lipid levels (TG, TC, LDL-C and HDL-C) was performed by the analysis of covariance. Association of NCOA2 polymorphisms with obesity and dyslipidemia was assessed by odds ratios (OR) and 95% confidence intervals (CI) under the unconditional logistic regression analysis. Results: Significant association was observed between rs10504473 polymorphism and obesity under the recessive model (OR = 1.88, 95% CI 1.02-3.45, P = 0.047; adjusted OR = 1.87, 95% CI 1.02-3.44, P = 0.048). However, no association remained significant after Bonferroni correction. Conclusion: Our study suggests a possible association between NCOA2 rs10504473 polymorphism and obesity, and this SNP may influence the susceptibility of obesity in the Chinese Han population.

Keywords: Nuclear receptor coactivator 2, single nucleotide polymorphism, obesity, dyslipidemia

Introduction

Obesity and dyslipidemia are two important risk factors for the development of metabolic syndrome and cardiovascular diseases in the Chinese population [1,2]. The results of Chinese national chronic non-communicable diseases surveillance in 2010 showed that the prevalence of obesity was 12.0% [3]. Luo et al. [4] reported that the prevalence of dyslipidemia was 52.7% among adults in Northwestern China. Owing to genome-wide association studies (GWAS), the total number of susceptible genes implicated in the development of obesity and dyslipidemia has increased substantially. For instance, common variation in the fat mass and obesity associated gene (FTO) was found to be associated with body mass index and adult obesity [5,6]. The lipoprotein lipase gene (LPL) polymorphisms were reported to play a key role in lipid metabolism in the Chinese Han population [7,8]. Peroxisome proliferator-activated receptor gamma (PPARγ) gene variants were found to be associated with serum lipid levels and to increase the risk of dyslipidemia [9,10].

Nuclear receptor coactivator 2 (NCOA2) is a member of the nuclear hormone receptor coactivator family [11,12]. The function of NCOA2 is mainly to enhance transcriptional activity of nuclear hormone receptors and certain other transcription factors, which modulate cell growth, differentiation and homeostasis by regulating the expression of target genes. NCOA2 mediates the stimulation of transcriptional initiation and regulates the transcription of specific genes in a ligand-dependent manner [13-15]. NCOA2 can impact metabolic homeostasis. Altered expression of NCOA2 may result in metabolic diseases [16-18]. The role of NCOA2 as a regulator of fat absorption was revealed in animal models [19]. Genetic ablation of the NCOA2 gene demonstrated its critical roles in lipid metabolism and energy balance [17,20]. Researches also showed that NCOA2 promote adipogenesis by interacting with PPARγ, a key regulator of adipocyte proliferation and differentiation. Thus, NCOA2 participates in conversion of preadipocytes into mature fat cells [21-23].

No published studies have examined the effect of NCOA2 single nucleotide polymorphisms (SNPs) on obesity and dyslipidemia. The present study was conducted to investigate the association of two NCOA2 SNPs (rs41391448 and rs10504473) with obesity and dyslipidemia in the Chinese Han population. The findings would enhance our understanding about the molecular and genetic mechanisms of metabolic diseases and advance new approaches for prevention and treatment of obesity and dyslipidemia.

Materials and methods

Study population

A total of 529 participants were enrolled in this study. The study group included 192 subjects from the health examination center of the Petroleum Jilin Chemical General Hospital during the year 2009-2010 and 337 subjects from the Survey of Chronic Diseases and Risk Factors among Adults in the Jilin Province of China in 2012. They were unrelated Han population in Northeastern China and aged from 40 to 84 years old. Individuals who had family history of obesity, dyslipidemia, and other metabolic diseases were excluded.

Ethical statements

Our experiments comply with the current laws of China. The study was approved by the Ethics Committee of the School of Public Health, Jilin University, and complied with the 1964 Helsinki declaration of ethical principles for medical research involving human subjects. Informed written consents were obtained from all the participants.

Epidemiological survey and biochemical examination

Demographic data and clinical information, including age, sex, ethnicity, and family medical history were collected with standardized questionnaires. In addition, the body height and weight of each participant were obtained by anthropometric measurements for calculating standard body mass index (BMI). Fasting blood samples of each subject were inspected by MODULE P800 automated biochemistry analyzer (ROCHE, USA) to measure serum triglyceride (TG), total cholesterol (TC), low-density lipoprotein cholesterol (LDL-C), and high-density lipoprotein cholesterol (HDL-C) levels.

Dyslipidemia was defined according to the Guidelines on Prevention and Treatment of Dyslipidemia in Chinese Adults (2007) [24]: TG ≥ 2.26 mmol/L as high; TC ≥ 6.22 mmol/L as high; LDL-C ≥ 4.14 mmol/L as high; and HDL-C < 1.04mmol/L as low. In our study, high TG, high TC, high LDL-C, or low HDL-C was regarded as dyslipidemia. BMI was calculated as weight (kg) divided by height (m2). According to the Guidelines for Prevention and Control of Overweight and Obesity in Chinese Adults [25], obesity was defined as BMI ≥ 28 kg/m2.

SNP selection

Two SNPs in the NCOA2 gene were selected using the HapMap website (http://snp.cshl.org/cgi-perl/gbrowse/hapmap24_B36/) and Haploview 4.2 software (Daly Lab. at the Broad Institute, USA). The rs41391448 and rs10504473 reside in the intron region of NCOA2 gene. The minor allele frequencies (MAF) of the two SNPs were all greater than 1% in this study.

DNA extraction

We obtained 5 ml peripheral blood sample from each subject for genotyping. The blood samples were collected in non-anticoagulant, plexiglass tubes, and then stored at -20°C until DNA extraction. Genomic DNA of each subject was extracted from peripheral blood lymphocytes using a DNA extraction kit (ClotBlood DNA kit, Cwbio, Beijing, China), according to the manufacturer’s instructions. The extracted DNA was then stored at 4°C for the following analysis. Purity and concentration of the isolated DNA were detected by ultraviolet spectrophotometer (Beckman, USA).

SNP genotyping

The DNA specimens were amplified by standard polymerase chain reaction (PCR) protocols. PCR reaction was performed on 384-well plates using a MassARRAY Nanodispenser (Sequenom). The primers for PCR reaction were designed using the Assay Design 3.1 software (Sequenom Inc., San Diego, CA, USA). SNP genotyping was detected by Matrix-Assisted Laser Desorption/Ionization Time of Flight Mass Spectrometry (MALDI-TOF-MS) [26] with the MassARRAY system (Sequenom, San, Diego, CA, USA).

Statistical analysis

Continuous variables were presented as mean ± standard deviation (SD) when agreed with normal distribution, otherwise described as median ± interquartile range. Categorical variables were presented using percentages instead. Variables that did not have a normal distribution were transformed into natural logarithms before the statistical tests were applied. Departure from Hardy-Weinberg equilibrium (HWE) [27] and genotype distribution between the groups were all evaluated using the Chi-square test. Analysis of covariance (ANCOVA) was applied to evaluate the effect of different genotypes on BMI and serum lipid levels (TG, TC, LDL-C, and HDL-C). Association between genotypes and the risk of obesity and dyslipidemia was assessed by odds ratios (OR) and 95% confidence intervals (CI) under the unconditional logistic regression analysis. Bonferroni correction was applied for multiple testing to reduce Type I error in association analysis. The Akaike information criterion (AIC) was used to determine the best model of inheritance for each SNP. All statistical analyses were performed using the SNPStats program (http://bioinfo.iconcologia.net/SNPStats) [28] and SPSS 17.0 software, and adjusted for age and sex when appropriate. Two-sided test with P < 0.05 was considered statistically significant.

Results

Characteristics of the study population

Table 1 shows the characteristics of all the subjects included in this study. The study included 252 males and 277 females. The average age was 58.94 ± 9.69 years. The mean concentrations of TG, TC, LDL-C, and HDL-C were 1.62 ± 1.51 mmol/L, 5.21 ± 1.13 mmol/L, 3.16 ± 1.02 mmol/L, and 1.22 ± 0.50 mmol/L, respectively. The average value of BMI was 24.26 ± 3.16 kg/m2. 52.9% and 9.6% of the subjects were diagnosed as dyslipidemia and obesity, respectively.

Table 1.

Characteristics of study subjects

Characteristics rs41391448 (n = 489) rs10504473 (n=505)

n (%) Mean ± SD n (%) Mean ± SD
Males 231 (47.2) 242 (47.9)
Age (years) 58.83 ± 9.68 58.93 ± 9.73
BMI (kg/m2) 24.30 ± 3.21 24.27 ± 3.19
    < 28 438 (89.6) 23.65 ± 2.66 454 (89.9) 23.64 ± 2.66
    ≥ 28 51 (10.4) 29.92 ± 1.51 51 (10.1) 29.92 ± 1.51
TG (mmol/L)* 1.63 ± 1.52 1.62 ± 1.51
    < 2.26 337 (68.9) 1.27 ± 0.76 350 (69.3) 1.28 ± 0.76
    ≥ 2.26 152 (31.1) 3.19 ±1.72 155 (30.7) 3.11 ± 1.68
TC (mmol/L) 5.20 ± 1.13 5.20 ± 1.13
    < 6.22 398 (81.4) 4.81 ± 0.75 412 (81.6) 4.81 ± 0.75
    ≥ 6.22 91 (18.6) 6.92 ± 0.84 93 (18.4) 6.93 ± 0.85
LDL-C (mmol/L) 3.14 ± 1.01 3.16 ± 1.01
    < 4.14 413 (84.5) 2.85 ± 0.73 425 (84.2) 2.86 ± 0.73
    ≥ 4.14 76 (15.5) 4.74 ± 0.76 80 (15.8) 4.77 ± 0.77
HDL-C (mmol/L)* 1.24 ± 0.50 1.23 ± 0.50
    < 1.04 142 (29.0) 0.90 ± 0.15 150 (29.7) 0.90 ± 0.15
    ≥ 1.04 347 (71.0) 1.39 ± 0.46 355 (70.3) 1.39 ± 0.45
*

Data was shown as median ± interquartile range;

Genotyping data of 40 subjects for rs41391448 and 24 subjects for rs10504473 were missing.

Genotype distribution and MAF of the two SNPs

The MAF and genotype distributions of the two SNPs are shown in Table 2. Genotyping rates of SNPs rs41391448 and rs10504473 in our study were 92.4% and 95.5%, respectively. All SNP genotype distributions were in HWE. The distribution of genotypes for each SNP was not significantly different between groups (P > 0.05).

Table 2.

MAF and genotype distributions of two NCOA2 polymorphisms

rs41391448 (A > G) rs10504473 (A > C)

Genotypes, n (%) MAF P Genotypes, n (%) MAF P


AA AG GG AA AC CC
Obesity Yes 40 (78.4) 10 (19.6) 1 (2.0) 0.12 0.85 12 (23.5) 20 (39.2) 19 (37.3) 0.57 0.12
No 328 (74.9) 99 (22.6) 11 (2.5) 0.14 122 (26.9) 223 (49.1) 109 (24.0) 0.49
Dyslipidemia Yes 198 (77.0) 54 (21.0) 5 (2.0) 0.12 0.55 74 (27.7) 132 (49.4) 61 (22.8) 0.48 0.39
No 170 (73.3) 55 (23.7) 7 (3.0) 0.15 60 (25.2) 111 (46.6) 67 (28.2) 0.51

Genotype distributions for each polymorphism shown separately for individuals with and without obesity or dyslipidemia; P values are derived from Chi-square test; MAF, minor allele frequency.

Association of two NCOA2 polymorphisms with BMI and serum lipid levels

The effect of different genotypes on BMI and serum lipid levels was performed using ANCOVA. As shown in Table 3, none of the two SNPs was significantly associated with BMI or serum lipid levels (TG, TC, LDL-C, and HDL-C) (P > 0.05).

Table 3.

Association between NCOA2 polymorphisms and BMI or serum indices

rs41391448 F P * rs10504473 F P *


AA (n = 368) AG (n = 109) GG (n = 12) AA (n = 134) AC (n = 243) CC (n = 128)
BMI (kg/m2) 24.37 ± 3.18 24.09 ± 3.25 24.08 ± 3.64 0.35 0.71 24.13 ± 3.14 24.35 ± 3.02 24.26 ± 3.56 0.31 0.73
TG (mmol/l) 1.69 ± 1.57 1.51 ± 1.30 1.63 ± 2.01 0.07 0.93 1.77 ± 1.50 1.68 ± 1.63 1.53 ± 1.17 1.51 0.22
TC (mmol/l) 5.20 ± 1.13 5.21 ± 1.08 5.05 ± 1.36 0.18 0.83 5.18 ± 0.93 5.26 ± 1.24 5.11 ± 1.08 0.71 0.49
HDL-C (mmol/l) 1.24 ± 0.51 1.23 ± 0.45 1.13 ± 0.69 0.22 0.81 1.30 ± 0.55 1.21 ± 0.49 1.22 ± 0.50 0.77 0.47
LDL-C (mmol/l) 3.14 ± 1.03 3.21 ± 0.92 2.72 ± 1.17 1.37 0.25 1.34 ± 0.47 1.28 ± 0.40 1.29 ± 0.40 0.09 0.91

BMI, TC, LDL-C were presented as mean ± standard deviation; TG and HDL-C were presented as median ± interquartile range; Bold values are statistically significant (P < 0.05);

*

P value was calculated with analysis of covariance adjusted for age and sex.

Association of two NCOA2 polymorphisms with obesity and dyslipidemia

For each SNP, the risk of obesity and dyslipidemia was estimated under different models of inheritance (codominant, dominant, recessive, overdominant and multiplicative models). As shown Table 4, promoting effect on obesity was observed for the rs10504473 polymorphism. Genotype CC was found to increase the risk of obesity in the recessive model (OR = 1.88, 95% CI 1.02-3.45, P = 0.047; adjusted OR = 1.87, 95% CI 1.02-3.44, P = 0.048). However, no association remained statistically significant after Bonferroni correction. The results indicate that SNP rs10504473 may play a critical role in the susceptibility of obesity, and need to be confirmed in further studies with larger sample size. While, SNP rs41391448 was not significantly associated with obesity and dyslipidemia before or after Bonferroni correction.

Table 4.

Association of NCOA2 polymorphisms with obesity and dyslipidemia

SNPs Models OR (95% CI) P * Adjusted OR (95%CI)# Adjusted P # AIC
Obesity rs41391448 Codominant 0.83 (0.40-1.72) 0.61 0.83 (0.40-1.73) 0.62 336.0
0.75 (0.09-5.92) 0.78 0.70 (0.09-5.64) 0.74
Dominant 0.82 (0.41-1.65) 0.57 0.82 (0.41-1.65) 0.57 334.0
Recessive 0.78 (0.10-6.14) 0.80 0.73 (0.09-5.83) 0.76 334.2
Overdominant 0.84 (0.40-1.73) 0.62 0.84 (0.41-1.74) 0.64 334.1
Multiplicative 0.84 (0.45-1.56) 0.57 0.84 (0.45-1.55) 0.56 334.0
rs10504473 Codominant 0.91 (0.43-1.93) 0.81 0.94 (0.44-2.01) 0.88 335.7
1.77 (0.82-3.82) 0.14 1.81 (0.84-3.90) 0.13
Dominant 1.19 (0.61-2.36) 0.60 1.23 (0.62-2.45) 0.54 337.3
Recessive 1.88 (1.02-3.45) 0.047 1.87 (1.02-3.44) 0.048 333.8
Overdominant 0.67 (0.37-1.21) 0.18 0.68 (0.38-1.24) 0.21 336.1
Multiplicative 1.38 (0.92-2.07) 0.12 1.39 (0.93-2.09) 0.11 335.1
Dyslipidemia rs41391448 Codominant 0.84 (0.55-1.29) 0.43 0.84 (0.55-1.29) 0.43 683.8
0.61 (0.19-1.97) 0.41 0.61 (0.19-1.98) 0.42
Dominant 0.82 (0.54-1.23) 0.34 0.82 (0.54-1.23) 0.33 682.1
Recessive 0.64 (0.20-2.04) 0.44 0.64 (0.20-2.05) 0.45 682.4
Overdominant 0.86 (0.56-1.31) 0.47 0.85 (0.55-1.31) 0.47 682.5
Multiplicative 0.82 (0.57-1.18) 0.28 0.82 (0.57-1.18) 0.28 681.8
rs10504473 Codominant 0.96 (0.63-1.47) 0.87 0.97 (0.63-1.49) 0.90 703.9
0.74 (0.45-1.20) 0.22 0.74 (0.45-1.20) 0.23
Dominant 0.88 (0.59-1.31) 0.52 0.88 (0.59-1.32) 0.54 703.4
Recessive 0.76 (0.51-1.13) 0.17 0.75 (0.50-1.13) 0.17 701.9
Overdominant 1.12 (0.79-1.59) 0.53 1.13 (0.79-1.61) 0.50 703.3
Multiplicative 0.86 (0.67-1.10) 0.22 0.86 (0.67-1.10) 0.23 702.3
#

Data was analyzed with unconditional logistic regression analysis adjusted for age and sex;

*

P values were not corrected by Bonferroni correction;

AIC, Akaike information criterion; OR, odds ratio; CI, confidence interval; Codominant, wild homozygote serves as the reference; Dominant, heterozygote and minor allele homozygote vs. wild homozygote; Recessive, minor allele homozygote vs. wild homozygote and heterozygote; Overdominant, heterozygote vs. wild homozygote and minor allele homozygote; Multiplicative, heterozygote and minor allele homozygote were weighted 1 and 2 respectively to wild homozygote.

Discussion

It has been confirmed that body weight gain in adults is associated with an increased risk for the development of type 2 diabetes mellitus and other obesity comorbidities [29,30]. The prevalence of obesity in the Chinese population has greatly increased over the past decade with the changes of lifestyle and diet [1,31]. Dyslipidemia is a major pathogenic factor for atherosclerosis and one of the independent risk factors for cardiovascular diseases in the Chinese population, particularly in middle-aged and elder subjects [4,32,33]. Therefore, we recruited individuals aged at least 40 years old from Northeast of China. Results from family and twin studies have demonstrated that genetic factors play a significant role in the development of obesity and dyslipidemia in response to a particular environment [5,34]. Genome-wide association and linkage studies have identified more than 50 loci that were associated with obesity and BMI [35], such as variants in the FTO gene [5]. Polymorphisms of CREB-regulated transcription coactivator 3 gene (CRTC3) were confirmed to play an important role in lipid metabolism and obesity in the Chinese Han population [36].

NCOA2 gene is located at chromosome 8q13 in humans. NCOA2 is a transcriptional coregulatory protein which expressed in a variety of hormone responsive tissues and implicated in adipogenesis, lipid metabolism, cancer, fertility, bone morphogenesis, and other pathological conditions [12,17,20,37,38]. NCOA2 has several nuclear receptor interacting domains and an intrinsic histone acetyltransferase activity. After binding to ligand-bound nuclear receptors, NCOA2 recruit histone acetyltransferases and methyltransferases to specific DNA enhancer or promoter regions, which mediates the stimulation of transcription initiation and makes downstream gene more accessible to transcription [12]. Therefore, the function of NCOA2 is mainly to enhance transcriptional activity of nuclear receptors and certain other transcription factors by facilitating chromatin remodeling, assembly of transcription factors, and target genes transcription [11,14].

NCOA2 plays a critical role in metabolic homeostasis due to its complex biological functions, and thus it is supposed to be a potential contributor to metabolic diseases [17,18]. A recent study by Duteil et al. [16] confirmed the metabolic functions of NCOA2 in white and brown adipose tissues as well as the liver. In NCOA2 null mice, white adipose tissue (WAT) showed a down-regulated expression of PPARγ gene, causing a higher level of lipolysis and a lower potential for fatty acid storage. Therefore, the ablation of NCOA2 gene could stimulate energy expenditure which protected against excessive fat accumulation induced by high fat diet or hyperphagia. The absence of NCOA2 in the brown adipose tissue (BAT) causes higher energy expenditure due to the enhanced fatty acid oxidation and uncoupling of respiration. Consequently, NCOA2 null mice showed enhanced adaptive thermogenesis and increased energy expenditure rendering them a protection against obesity [12,20,39,40]. Several knock out studies conducted on animal models have revealed the role of NCOA2 as a regulator of fat absorption. The expression of NCOA2 results in activation of the genes that trigger bile production in the liver. Mice lacking the NCOA2 gene were unable to absorb fat properly, suggesting that the NCOA2 gene is involved in fat absorption [19]. Whole body ablation of NCOA2 led to a reduced capacity to absorb dietary fat from the gut. Hepatocyte-specific ablation of NCOA2 resulted in intestinal fat malabsorption and reduced entry of fat into the circulation, which can be restored by replenishing the bile acid levels. Moreover, NCOA2 positively regulates bile acid secretion into the gut. It was ascertained by studies on animal models that the expression of major bile acid transporter was significantly decreased in NCOA2 null mice [19]. Jeong et al. [17] observed that several key regulatory enzymes involved in fatty acid and cholesterol biosynthesis were decreased in the NCOA2 null mice as compared with wild types.

According to the previous studies conducted on animal models and human adipocytes above, it was hypothesized that NCOA2 was associated with obesity and dyslipidemia. The association of NCOA2 variations with obesity and dyslipidemia has not ever been reported. Hence, genetic association studies on NCOA2 polymorphisms would promote a further understanding of NCOA2 with obesity and dyslipidemia. In our study, it showed possible relevance of NCOA2 rs10504473 polymorphism to the risk of obesity though it became insignificant after Bonferroni correction. It supposed that SNP rs10504473 may have a promoting effect on the risk of obesity. NCOA2 functions as a transcriptional coactivator for PPARγ and stimulates the fat uptake under high fat feeding conditions. It plays a key role in promoting human adipogenesis by interacting with PPAR γ, a regulator of adipogenesis which converts human preadipocyte into a mature fat cell [21-23]. SNP rs10504473 reside in the intron region of NCOA2 gene. Variation in that locus may change the expression of NCOA2. Accordingly, it would influence the function of PPARγ which may cause higher potential for fatty acids storage and increase the risk of obesity.

The limitations of our analysis include but not limit to the relatively small sample size and genetic heterogeneity of the study population. Moreover, two SNPs can hardly reveal the effect of NCOA2 gene on obesity and dyslipidemia. Therefore, studying a larger number of SNPs within NCOA2 gene would possibly obtain a more reliable result. Modified studies encompassing gene-gene and gene-environment interactions are also required to thoroughly ascertain the contribution of NCOA2 variants to the risk of obesity and dyslipidemia. In addition, the variation of environmental exposure should be taken into account in our study.

In conclusion, NCOA2 rs10504473 polymorphism is likely to influence the susceptibility of obesity, but it may not be associated with dyslipidemia in the Chinese Han population. Considering the critical role of NCOA2 in adipogenesis and lipid metabolism, further genetic association studies with large sample size and different ethnic population are needed to confirm our observation, and the findings would help developing new approaches for prevention and treatment of obesity and dyslipidemia.

Acknowledgements

This study was supported by the Scientific Research Foundation of the Health Bureau of Jilin Province in China (No. 2011Z116), the National Natural Science Foundation of China (No. 30870952), the Science and Technology Department of Jilin Province (No. 20080735), and the Health Department of Jilin Province (No. 2001R009).

Disclosure of conflict of interest

None.

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