Table 1.
Methods | Type | Features |
---|---|---|
MULTICOM-NOVEL | Single | Structural, physical, chemical features |
OPUS-PSP | S | Contact potentials based on side chain functional groups |
ProQ2 | S | Structural features |
RWplus | S | Side-chain orientation dependent potential |
ModelEvaluator | S | Structural features, contacts |
Modelcheck2 | S | Structural features, contacts, disorder, conservation |
RF_CB_SRS | S | Distance dependent statistical potential |
SELECTpro | S | Energy-based (h-bond, angle, electrostatics, vdw) |
Dope | S | Statistical potential |
DFIRE2 | S | Energy-based potential |
ModFOLDclust2 | Multi | Pairwise model similarity (geometry) |
APOLLO | M | Pairwise model similarity |
Pcons | M | Pairwise model similarity |
QApro | M+S | Weighted pairwise model similarity |
MULTICOM (human) | Consensus | Average ranking |
The highlighted methods are built in house. S: single-model method; M: multi-model method.