Abstract
The mechanism by which c-Jun N-terminal protein kinase (JNK) promotes tissue injury is poorly understood. Thus we aimed at studying the roles of JNK and its phospho-target proteins in mouse models of acute liver injury. Young male mice were exposed to a single dose of CCl4 (50 mg/kg, IP) and euthanized at different time points. Liver histology, blood alanine aminotransferase, and other enzyme activities were measured in CCl4-exposed mice without or with the highly-specific JNK inhibitors. Phosphoproteins were purified from control or CCl4-exposed mice and analyzed by differential mass-spectrometry followed by further characterizations of immunoprecipitation and activity measurements. JNK was activated within 1 h while liver damage was maximal at 24 h post-CCl4 injection. Markedly increased phosphorylation of many mitochondrial proteins was observed between 1 and 8 h following CCl4 exposure. Pretreatment with the selective JNK inhibitor SU3327 or the mitochondria-targeted antioxidant mito-TEMPO markedly reduced the levels of p-JNK, mitochondrial phosphoproteins and liver damage in CCl4-exposed mice. Differential proteomic analysis identified many phosphorylated mitochondrial proteins involved in anti-oxidant defense, electron transfer, energy supply, fatty acid oxidation, etc. Aldehyde dehydrogenase, NADH-ubiquinone oxidoreductase, and α-ketoglutarate dehydrogenase were phosphorylated in CCl4-exposed mice but dephosphorylated after SU3327 pretreatment. Consistently, the suppressed activities of these enzymes were restored by SU3327 pretreatment in CCl4-exposed mice. These data provide a novel mechanism by which JNK, rapidly activated by CCl4, promotes mitochondrial dysfunction and acute hepatotoxicity through robust phosphorylation of numerous mitochondrial proteins.
Abbreviations: ALT, alanine aminotransferase; APAP, acetaminophen; CYP2E1, cytochrome P450 2E1; ERK, extracellular signal-regulated kinase; α-KGDH, α-ketoglutarate dehydrogenase; HAE, 4-hydroxyalkenal; JNK, c-Jun N-terminal protein kinase; MDA, malondialdehyde; MPT, mitochondrial permeability transition; NdufS1, 75 kDa-subunit NAD+-dependent ubiquinone-oxidoreductase; p38K, p38 kinase; PBS, phosphate buffered saline; PDH, pyruvate dehydrogenase; TNF-α, tumor necrosis factor-alpha; WT, wild-type
Keywords: Acute liver injury, Carbon tetrachloride, JNK, Protein phosphorylation, Mitochondria, Differential proteomics
Graphical abstract

Highlights
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JNK was rapidly activated after carbon tetrachloride (CCl4) exposure.
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Activated JNK was translocated to mitochondria and phosphorylated many proteins.
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Many mitochondrial phosphoproteins were identified by mass-spec analysis.
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Mitochondrial ALDH2, α-KGDH, and complex I were inactivated by phosphorylation.
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JNK inhibition reduced phosphorylation of mitochondrial proteins and hepatotoxicity.
1. . Introduction
Epidemiological studies revealed that many people suffer from acute liver failure, which can be produced by overdose of potentially toxic compounds such as acetaminophen (APAP), cocaine, and binge alcohol (ethanol). For instance, over 56,000 emergency room visits with more than 400 deaths per year are due to APAP-induced acute liver injury in the United States alone [1]. Over-exposure to these substances can cause cell/tissue injury and sudden deaths in humans and experimental models [1], [2] especially in combination with alcohol through additive or synergistic interactions [3], [4]. However, the molecular mechanisms of acute liver damage by these agents remain elusive because of the conflicting results.
Carbon tetrachloride (CCl4) is a hepatotoxic solvent widely used to study the mechanisms for acute liver injury and chronic fibrosis in experimental models [5], [6], [7], [8]. The majority of CCl4 is metabolized by the ethanol-inducible CYP2E1 and thus Cyp2e1-null mice are protected from CCl4-induced liver damage [9]. Following CYP2E1-related metabolism, free radical metabolites of CCl4 attack cellular membranes, producing lipid peroxides, leading to severe necrosis in the pericentral regions of the liver [5], [6]. However, despite the well-established role of lipid peroxidation in this model [5], [6], it is virtually unknown whether CCl4 can promote liver injury through modifying the phosphorylation of cellular proteins.
Mitogen-activated protein kinases (MAPKs) are cell signal-related kinases known to regulate cell death and growth, depending on the cellular contexts and their temporal fluctuations. It is well-established that there are three major MAPKs: c-Jun N-terminal protein kinase (JNK), p38 kinase (p38K), and extracellular signal-regulated kinase (ERK). In general, activation of JNK and p38K is related to cell death signaling pathways while ERK activation is involved in cell survival and proliferation [10]. JNK-related signaling pathways are also known to be associated with liver physiology and pathology [11]. For instance, JNK-mediated cell damage has been observed with many toxic compounds such as APAP [12], [13], [14], staurosporine [15] and UV exposure [15] as well as under pathological conditions including ischemia-reperfusion injury [16]. Mendelson et al. [17] reported that JNK was potently activated while ERK and p38K remained unchanged and decreased, respectively, following CCl4 treatment, suggesting a role of JNK in promoting hepatotoxicity. In contrast, other investigators reported that JNK activation was not critical in CCl4-mediated acute liver injury, compared to the important role of JNK in APAP-induced liver damage [12], [13]. Therefore, the underlying mechanism by which activated (phosphorylated) p-JNK promotes cell or liver damage is poorly understood.
We recently reported that CCl4 rapidly activated p-JNK, which was translocated to mitochondria and phosphorylated mitochondrial aldehyde dehydrogenase (ALDH2), an anti-oxidant enzyme, leading to its inactivation and accumulation of lipid peroxides following CCl4 exposure [18]. In addition, a previous report with isolated mitochondrial proteins showed that activated p-JNK phosphorylated other mitochondrial enzymes such as pyruvate dehydrogenase (PDH) E1α and β subunits, ATP synthase α and β subunits, and heat shock proteins (Hsp60 and Hsp70) [19]. Based on these reports, we hypothesized that p-JNK, rapidly activated at early hours after CCl4 exposure, translocates to mitochondria, phosphorylates many mitochondrial proteins and suppresses their functions, contributing to mitochondrial dysfunction and necrotic liver damage. However, it is poorly understood how many other proteins are phosphorylated by p-JNK and whether these phosphoproteins are functionally altered to contribute to CCl4-induced liver injury. Thus, we investigated the mechanism of acute hepatotoxicity by determining the role of JNK in promoting mitochondrial dysfunction and liver necrosis. For this purpose, we specifically aimed to identify and characterize mitochondrial JNK-target proteins in the absence or presence of the specific JNK inhibitors. To further support the role of JNK in causing hepatotoxicity, we also evaluated the histological and biochemical measurements of CCl4-exposed Cyp2e1-null mice as compared to those of the corresponding wild-type (WT) counterparts.
2. Materials and methods
2.1. Chemicals and other materials
NAD+ and propionyl aldehyde were purchased from Sigma (St. Louis, MO, USA). Specific antibodies to c-Jun, phospho-c-Jun (Ser63), JNK, phospho-JNK (Thr183/Tyr185), p38 kinase, phospho-p38 kinase (Thr180/Tyr182), ERK, phospho-ERK (Thr202/Tyr204), phospho-Ser-Pro, Bax, and cytochrome C were purchased from Cell Signaling Technology, Inc (Beverly, MA). Phosphoprotein-purification kit including the metal-affinity columns was obtained from Qiagen (Valencia, CA). ProQ-Diamond phosphoprotein staining reagent was from Invitrogen (Eugene, OR). Specific goat polyclonal antibodies to mitochondrial ALDH2, 75-kDa subunit (Ndufs1) of NADH-ubiquinone oxidoreductase (complex I), cytochrome c oxidase (complex IV), ATP synthase beta-subunit (ATP5B, complex V), lamin, α-tubulin, peroxiredoxin, and α-ketoglutarate dehydrogenase (α-KGDH) were obtained from Santa Cruz Biotechnology, Inc (Santa Cruz, CA, USA). Specific antibodies to 3-nitro-Tyr (3-NT) were from Abcam (Cambridge, MA) while specific anti-HNE-adducts were purchased from Calbiochem (La Jolla, CA, USA). Specific JNK inhibitors SU3327 [20] and BI-78D3 [21] were purchased from Tocris Bioscience (Bristol, United Kingdom). Both SU3327 and BI-78D3 inhibit JNK activity through blockade of protein-protein interaction between JNK and its scaffolding protein JNK-interacting protein-1 (JIP-1). In addition, another report suggested that BI-78D3 can inhibit JNK activity through covalent modification of Cys163 of JNK [22]. Other agents including the JNK inhibitor SP600125 and the mitochondria-targeted antioxidant mito-TEMPO [2-(2,2,6,6-tetramethylpiperidine-1-oxyl-4-ylamino)2-oxoethyl]tripphenylphosphenium chloride [23] were obtained from Sigma (St. Louis, MO, USA).
2.2. Animal treatment and histological analysis
Age and gender-matched young male NCI-WT mice (Svj-129 background) and Cyp2e1-null mice [24], kindly provided by Dr. Frank J. Gonzalez (National Cancer Institute, Bethesda, MD), were used and kept in a 12 h light-dark cycle with food and water ad libitum in accordance with NIH guidelines. After a single intraperitoneal injection of CCl4 (50 mg/kg as 0.5% in corn oil), the WT and Cyp2e1-null mice (n=4–5/group) were euthanized at the indicated time points. Each JNK inhibitor (10 mg/kg, a single ip injection, n=4–5/group) was prepared as 1.25 mg/mL with 10% Solutol-HS15 in PBS, and administered 30 min prior to CCl4 injection. Mito-TEMPO was dissolved in sterile saline and administered by a single dose at 5 mg/kg ip 30 min before CCl4 treatment. A portion from the largest lobe of each liver, obtained from CCl4-exposed WT in the absence or presence of JNK inhibitors and Cyp2e1-null mice collected at different time points, was fixed in 10% neutral buffered formalin. After paraffin embedding and the cutting of 4 µm slices, all sections were stained with hematoxylin and eosin (H&E), as described [24]. Histological evaluation was performed in a blinded manner.
2.3. Mass spectrometry analysis of purified phosphorylated proteins
To affinity-purify phosphorylated proteins, 250 mg of mitochondrial proteins from WT mice at 2 h post-injection of CCl4, were subjected to a metal-affinity column (Qiagen, Valencia, CA) by following the manufacturer’s instructions. The purification procedures for vehicle-control (control) and CCl4-exposed samples, respectively, were repeated at least five times to collect sufficient amounts of purified phosphoproteins. Purified phosphoproteins were resolved on 1-D SDS-PAGE. Each gel lane was cut with a razor blade into 13 bands, transferred into clean tubes and subjected to further digestion with sequencing grade trypsin (Promega, Madison, WI, USA). In-gel digestion of protein gel slices, nanoflow reversed-phase liquid chromatography (nanoRPLC)–tandem mass spectrometry (MS/MS) and protein identification analyses were performed as recently described [25]. For mass spectrometry analysis, each sample was re-dissolved in 15 μL of 0.1% formic acid and 5 μL was injected onto a 9 cm×75 μm i.d. in-house packed fused silica capillary electrospray ionization (ESI) C18 column, which was coupled online to a liner ion trap mass spectrometer (LTQ XL, Thermo Electron, San Jose, CA). Peptide separation was performed at a flow rate of ~250 nL/min using a step gradient of 2–42% solvent B (0.1% formic acid in acetonitrile) for 40 min, 42–98% solvent B for 10 min, and 98% solvent B for 5 min. Both solvents A (0.1% formic acid in water) and B were delivered by an Agilent 1200 nanoflow LC system (Agilent Technologies, Palo Alto, CA). The mass spectrometer was operated in a data dependent mode in which each full MS scan was followed by 7 MS/MS scans where the 7 most abundant peptide molecular ions were dynamically selected from the prior MS scan for collision-induced dissociation (CID) using a normalized collision energy of 35%. The raw MS/MS data were searched using the SEQUEST cluster running under BioWorks (Rev. 3.3.1 SP1) (Thermo Electron, San Jose, CA) against a mouse IPI proteome database downloaded from the European Bioinformatics Institute (EBI) (http://www.ebi.ac.uk) for the identification of peptides and proteins within each gel band. To identify phosphoproteins from CCl4-exposed samples, only the proteins with two or more unique peptides were considered confidently as legitimate identifications. Subtraction of phosphoproteins between control and CCl4-exposed samples was performed to further identify the proteins preferentially phosphorylated by CCl4 exposure [26] using the similar method described previously [27]. For this analysis, the area of extracted ion chromatogram of each identified peptide was calculated. The total area of all the peptides identified from the same protein was then normalized by the total area of all the proteins identified within the sample (13 gel bands for each sample) and expressed as parts per million (ppm) that referred to normalized intensity. After normalization, a ratio was calculated for each protein between the CCl4-exposed and the control samples. A ratio of CCl4/control≥1.5 was used to identify phosphoproteins following CCl4-exposure, since CCl4 treatment markedly increased phosphorylation of mitochondrial proteins compared to those of control. The quantified mitochondrial phosphoproteins were further analyzed using MetaCore (GeneGo, St. Joseph, MI, USA) software for molecular toxicity analysis according to the method described previously [28] and for verification of mitochondrial localization of proteins in conjunction with UniProt Knowledgebase (http://www.uniprot.org).
2.4. SDS-PAGE and immunoblot analysis
Mitochondrial fractions were prepared from pooled mouse livers (n=4–5/group) from the different treatment groups, as previously described [29], [30]. CHAPS-solubilized mitochondrial proteins were dissolved in Laemmli SDS-sample buffer and electrophoresed as per manufacturer's recommendations (Bio-Rad, Hercules, CA) and subjected to immunoblot analysis with the specific antibody to JNK, p-JNK, p-c-Jun, p-Ser-Pro, α-KGDH, ATP5B, NdufS1, or ALDH2, as indicated. The images were visualized by enhanced chemiluminescence detection by following the manufacturer’s recommendations (Pierce, Rockford, IL, USA).
2.5. Measurements of liver injury parameters, enzyme activities, and mitochondrial swelling index
Serum alanine aminotransferase (ALT) level from each mouse was determined by using the automated IDEXX Catachem chemistry analyzer system (IDEXX Laboratories, West Brook, ME, USA). The concentration of lipid peroxides as malondialdehyde (MDA)+4-hydroxyalkenal (HAE) (µM) was measured with a commercially available kit (Oxford Biomedical Research, Oxford, MI, USA) by following the manufacturer’s protocol. Serum TNFα-levels were determined by using an ELISA assay kit using the manufacturer’s protocol (eBioscience, San Diego, CA). Anti-phospho-c-Jun (Ser63) antibody was used to measure JNK activity by immunoblot analysis. Mitochondrial and nuclear fractions from each group were further prepared by subtractive centrifugation, as described [29], [30]. The respective marker proteins for cytosol, mitochondria and nuclear fractions were shown to verify relative purity of each fraction (Supplemental Fig. S1). Mitochondrial ALDH2 activity was measured by quantifying the production of NADH at 340 nm, as previously described [31]. One unit of activity was defined as increase in the absorbance at 340 nm per 0.1 mg protein/min multiplied by 1000. NAD+-dependent ubiquinone-oxidoreductase (mitochondrial complex I) activity was measured by the method previously described [25], [32] except that rotenone-containing samples were measured in parallel. Rotenone-sensitive activities were normalized with control sample. Activities of α-ketoglutarate dehydrogenase (α-KGDH) were determined as previously described [33] with a modification where the reaction volumes were reduced to 0.2 mL and 0.1 mg mitochondrial proteins were used for each measurement. One unit of activity was defined as increase in the absorbance at 340 nm per 0.1 mg protein/min multiplied by 1000. Mitochondrial swelling index was determined as described [34]. All activities were measured with a Synergy 2 microplate reader (BioTek, Winooski, VT, USA).
2.6. Immunoprecipitation and immunoblot analysis
Immunoprecipitations of ALDH2, α-KGDH, and NdufS1 (the 75-kDa subunit of complex I) with the specific antibody to each protein were conducted by following the recommended protocol of Dynabeads (Invitrogen-Life Technologies, Grand Island, NY, USA). A separate aliquot of mitochondrial proteins (0.5 mg each) was incubated with 2 µg of antibody-conjugated beads overnight. The immunoprecipitated proteins were dissolved in Laemmli buffer for immunoblot analysis using the specific antibody against each target protein, as indicated [29].
2.7. Intensity data processing and statistical analysis
The intensity of immuno-recognized protein bands such as ALDH2, NdufS1 75-kDa subunit of mitochondrial complex I, α-KGDH, etc on 1-D gels was determined by using a gel digitizing software (UN-SCAN-IT™, Orem, Utah, USA), as previously described [18], [25]. All data in this report represent the results from at least three separate experiments, unless stated otherwise. Statistical analyses were performed using the Student's t test and p<0.05 was considered statistically significant. Other methods and materials not described were the same as reported previously [25], [28], [29], [30] or described in the Supplemental files.
3. Results
3.1. Time-dependent JNK activation and its role in CCl4-induced liver injury
Our results showed that serum ALT levels remained unchanged until 8 h but markedly increased at 24 h post-CCl4 injection (Fig. 1A). Consistently, liver histology showed severe pericentral necrosis observed only at 24 h with little liver injury until 8 h post-injection (Fig. 1B). CCl4-induced liver damage is related to increased lipid peroxidation [5], [6] and inflammation as reflected by elevated levels of TNFα [13], [35]. However, our data revealed that the levels of lipid peroxide measured by MDA+HAE (Fig. 1C) and serum TNFα (Fig. 1D) remained unchanged up to 8 h, although they were significantly elevated at 24 h post-injection.
Fig. 1.
Time-dependent JNK activation and its role in CCl4-induced hepatotoxicity in WT mice. (A) Time-dependent changes in the serum ALT levels and (B) typical H&E-stained liver slides are presented for each indicated group (magnification 100×). Severe necrotic regions of CCl4-exposed samples are marked with broken lines in (B). (C) Hepatic levels of MDA+HAE, and (D) serum TNF-alpha levels following CCl4 exposure are presented. *, Significantly different (p<0.05) from the other groups.
Based on rapid JNK activation in CCl4-exposed rats [17], [18], [36], we studied the temporal activation of MAPKs in CCl4-exposed mice by immunoblot analysis. JNK was not activated in corn-oil (control) group, but potently activated (phosphorylated) at 1 and 2 h post-CCl4 injection (Fig. 2A). Activated p-p38K was detected in control and its levels did not change (i.e., decreased) until 4 h upon CCl4 exposure. In contrast, the activated p-ERK was detected in control while their levels were increased at 1 or 2 h and returned to basal levels at 4 h post-injection (Fig. 2A). The activated phospho-c-Jun was also detected between 2 and 8 h after CCl4-injection, while c-Jun levels were increased between 1 and 8 h.
Fig. 2.
Time-dependent changes in JNK, phosphorylated mitochondrial proteins and JNK activation in CCl4–exposed WT or Cyp2e1-null mice. (A) Whole cell lysates (50 µg/assay) for indicated samples from WT mice were subjected to immunoblot analysis with the specific anti-p-JNK, anti-p-p38K, anti-p-ERK, their respective non-phosphoproteins, anti-c-Jun, or anti-phospho-c-Jun antibody. (B) Mitochondrial lysates (50 µg/lane) for indicated samples from WT mice were subjected to immunoblot analysis using anti-p-Ser-Pro antibody (left) or anti-p-Thr-Pro antibody (right). Time-dependent changes in the serum ALT levels (C) and JNK activation (D) are presented. Whole cell lysates (50 µg/assay) for indicated samples (n=4/each time point) were used to determine JNK activation by immunoblot analysis by using anti-p-JNK antibody (top) and anti-JNK antibody (bottom).
3.2. JNK target proteins and role of CYP2E1 in CCl4-induced JNK activation
The levels of total mitochondrial phosphoproteins, detected by anti-p-Ser-Pro antibody, were markedly increased at 1 h and lasted up to 8 h post-CCl4 injection (Fig. 2B, left). However, the levels of mitochondrial phosphoproteins, detected by anti-p-Thr-Pro antibody, were very similar between control and CCl4-exposed samples, except for a few protein bands (Fig. 2B, right). These results suggest that the number and levels of many phosphorylated mitochondrial proteins were increased following CCl4 exposure, although some phosphoproteins existed in control mice.
We also determined the levels of JNK activation at 2 h and the degrees of acute hepatotoxicity assessed by ALT and histology at 24 h in CCl4-exposed WT and Cyp2e1-null mice. Similar to the earlier reports [9], ALT levels (Fig. 2C) and histological liver damage (data not shown) were very low in CCl4-exposed Cyp2e1-null mice even at 24 h, compared to the corresponding WT mice (Fig. 1A and B, respectively). In addition, the JNK was not activated in Cyp2e1-null mice at any time points following CCl4 exposure, compared to the corresponding WT mice (Fig. 2D). These results suggest that CYP2E1-mediated CCl4 metabolism is required for JNK activation, which becomes very important in causing acute hepatotoxicity usually observed at later time points [11], [12], [13], [14], [18].
3.3. Protection of CCl4-induced liver injury by new selective JNK inhibitors
To further determine the critical role of JNK in mitochondrial dysfunction and liver injury, we evaluated the effects of known chemical inhibitors of JNK on CCl4-induced JNK activation and translocation of p-JNK to mitochondria at 2 h and hepatotoxicity at 24 h post-CCl4 injection (n=4–5/group). Pretreatment with ATP-competitive JNK inhibitor SP600125 did not prevent CCl4-induced liver injury determined by serum ALT levels and liver histology (Supplemental Fig. S2A and B, respectively), unlike the earlier reports [12], [37]. However, pretreatment with a new specific JNK inhibitor SU3327 [20] significantly protected against CCl4-induced acute hepatotoxicity assessed by ALT levels (Fig. 3A) and liver histology (Fig. 3B). Pretreatment with another specific JNK inhibitor BI-78D3 [21], [22] also showed similar results of protection against CCl4-induced hepatotoxicity based on the serum ALT levels (Supplemental Fig. S2C).
Fig. 3.
Pharmacological inhibition of JNK activation alleviates the CCl4-induced liver injury. (A) Serum ALT levels and (B) H&E-stained liver histology (magnification 100×) at 24 h following CCl4 exposure in WT mice with or without SU3327 pretreatment are presented. *, Significantly different (p<0.05) between the two groups. Severe necrotic regions are marked with broken lines. (C) Immunoblot analyses demonstrating relative JNK or ERK activation in the indicated groups treated with CCl4 for 2 h are presented. Peroxiredoxin (Prx, bottom panel) levels were presented as a loading control. (D) Mitochondrial proteins treated for 2 h (50 µg/lane) were subjected to immunoblot analysis with the specific antibody to phospho-JNK (top), p-ERK (second panel), ALDH2 (third panel), or ATP synthase β-subunit (ATP5B, bottom) used as a loading control. (E) Relative levels of phosphorylated mitochondrial proteins in the indicated samples treated with CCl4 for 2 h are shown after determining their levels by immunoblot analysis by using anti-p-Ser-Pro antibody (top) or anti-ATP5B as a loading control (bottom).
We further studied the effect of SU3327 on JNK activation and translocation of p-JNK to mitochondria at 2 h post-CCl4 injection. JNK was potently activated in CCl4-exposed WT mice (Fig. 3C, top panel, second lane) compared to the control (first lane). SU3327 pretreatment markedly reduced the intensity of active p-JNK in CCl4-exposed mice (third lane). Consistently, SU3327 pretreatment markedly decreased the amount of active p-JNK translocated to mitochondria (Fig. 3D, top panel, third lane) compared with the corresponding CCl4-exposed mice (second lane). In contrast, the levels of p-ERK in cytoplasm and mitochondria were unchanged regardless of SU3327 pretreatment (Fig. 3C and D, middle panels, respectively). Consequently, the levels of phosphorylated mitochondrial proteins causally correlated with the levels of active p-JNK in CCl4-exposed mice in the absence or presence of SU3327 pretreatment (Fig. 3E).
We also evaluated the effect of SU3327 on the levels of lipid peroxides as determined by [MDA+HAE]. CCl4 treatment elevated the levels of [MDA+HAE] (Fig. 4A, second lane) compared to those of vehicle control (first lane) when measured at 24 h, based on the time-dependent increment of lipid peroxides (Fig. 1C). SU3327 pretreatment significantly decreased the levels of lipid peroxides (third lane). We also investigated the effects of the mitochondria-targeted antioxidant mito-TEMPO [23] on the levels of activated p-JNK and phosphorylated mitochondrial proteins. Consistently with the Fig. 2 results, the levels of active p-JNK and mitochondrial phosphoproteins (second lanes of Fig. 4B and C, respectively) were promptly elevated in WT mice exposed to CCl4 for 2 h, compared to vehicle controls (first lanes). Pretreatment with mito-TEMPO markedly suppressed the levels of p-JNK and phosphoproteins (third lanes of Fig. 4B and C, respectively), compared to those of the mice exposed to CCl4 alone (middle lanes in Fig. 4B and C, respectively). These results suggest the important role of p-JNK activated at earlier time points in promoting liver injury observed at later times through protein phosphorylation.
Fig. 4.
Effects of SU3327 and mito-TEMPO on the levels of lipid peroxides, p-JNK and mitochondrial protein phosphorylation in CCl4-exposed mice. (A) The levels of lipid peroxides [MDA+HAE] at 24 h post-CCl4 injection without or with SU3327 pretreatment are shown. *, Significantly different (p<0.05) between the two groups, as indicated. The Immunoblot results for the levels of (B) active p-JNK and (C) mitochondrial phosphoproteins at 2 h following CCl4 exposure in WT mice without or with mito-TEMPO pretreatment are presented. Other parameters, including ATP synthase-β subunit (ATP5B, bottom) used as a loading control, are same as the Fig. 3 legend.
3.4. Identification of mitochondrial phosphoproteins
Based on these results with the presence of phosphoproteins in control mice (Fig. 1, Fig. 2, Fig. 3, Fig. 4), we purified phosphorylated mitochondrial proteins respectively from vehicle-control and WT mice exposed to CCl4 for 2 h by using a metal-affinity phosphoprotein purification kit (Qiagen). Subtractive phosphoproteomic analysis of the mass spectral data with a ratio of CCl4/control groups greater than 1.5-fold revealed that at least 106 mitochondrial proteins were phosphorylated in the CCl4-exposed samples (Table 1). As summarized in Fig. 5, many proteins, involved in major mitochondrial functions such as energy supply, electron transfer, fatty acid oxidation, anti-oxidant defense, chaperones, amino acid metabolism, etc, were likely phosphorylated by active p-JNK following CCl4-injection. To systematically evaluate the role of these mitochondrial proteins in any organ toxicities, we performed molecular toxicity and pathology enrichment analysis of these proteins by using MetaCore software. Our analysis revealed that many of these phosphoproteins are highly associated with liver toxicity (Supplemental Fig. S3).
Table 1.
Summary of phosphorylated mitochondrial proteins in control and CCl4-exposed mouse livers identified by mass-spectral analysis. Subtraction of phosphoproteins in control (CTRL) and CCl4-exposed (EXP) mice was performed as described in the Section 2.3 of Materials and Methods. Only the proteins with the total area ratios greater than 1.5-fold between EXP and CTRL groups are shown.
| Accession | Name | Description | Fold (EXP/CTRL) | Normalized Intensity_CTRL (ppm) | Normalized Intensity_EXP (ppm) |
|---|---|---|---|---|---|
| IPI00169916.11 | Cltc | Clathrin heavy chain 1 | 137.64 | 1.11E+01 | 1.53E+03 |
| IPI00757372.2 | Isoc2a | Isochorismatase domain-containing protein 2A, mitochondrial | 49.97 | 1.50E+01 | 7.48E+02 |
| IPI00120212.1 | Ndufa9 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mito | 30.5 | 1.19E+01 | 3.64E+02 |
| IPI00319652.2 | Gpx1 | Glutathione peroxidase 1 | 30.37 | 8.33E+01 | 2.53E+03 |
| IPI00454049.4 | Echs1 | Enoyl-CoA hydratase, mitochondrial | 28.25 | 2.38E+02 | 6.72E+03 |
| IPI00468653.4 | Pccb | Propionyl-CoA carboxylase beta chain, mitochondrial | 21.86 | 6.24E+01 | 1.36E+03 |
| IPI00153317.3 | Aldh1l1 | 10-formyltetrahydrofolate dehydrogenase | 20.48 | 3.19E+02 | 6.52E+03 |
| IPI00122048.2 | Atp1a3 | Sodium/potassium-transporting ATPase subunit alpha-3 | 20.16 | 1.06E+02 | 2.14E+03 |
| IPI00330523.1 | Pcca | Propionyl-CoA carboxylase alpha chain, mitochondrial | 18.75 | 1.42E+02 | 2.66E+03 |
| IPI00133553.1 | Mut | MethyMethylmalonyl-CoA isomerase, involved in the degradation of several amino acids | 18.7 | 3.40E+01 | 6.36E+02 |
| IPI00311682.5 | Atp1a1 | Sodium/potassium-transporting ATPase subunit alpha-1 | 15.7 | 3.95E+02 | 6.21E+03 |
| IPI00153660.4 | Dlat | Acetyltransferase component of pyruvate dehydrogenase complex | 13.88 | 1.67E+02 | 2.31E+03 |
| IPI00471246.2 | Ivd | Isovaleryl-CoA dehydrogenase, mitochondrial | 12.41 | 1.38E+01 | 1.71E+02 |
| IPI00420706.4 | Lrpprc | Leucine-rich PPR motif-containing protein, mitochondrial | 11.07 | 5.64E+02 | 6.24E+03 |
| IPI00122549.1 | Vdac1 | Isoform Pl-VDAC1 of Voltage-dependent anion-selective channel protein 1 | 10.55 | 1.87E+01 | 1.97E+02 |
| IPI00114209.1 | Glud1 | Glutamate dehydrogenase 1, mitochondrial | 9.37 | 3.57E+03 | 3.34E+04 |
| IPI00115302.3 | Bckdhb | Isoform 2 of 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial | 9.32 | 1.38E+02 | 1.29E+03 |
| IPI00321718.4 | Phb2 | Prohibitin-2 | 9.25 | 6.36E+01 | 5.88E+02 |
| IPI00313998.1 | Sqrdl | Sulfide:quinone oxidoreductase, mitochondrial | 9.12 | 7.06E+02 | 6.44E+03 |
| IPI00308882.4 | Ndufs1 | NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial | 9.04 | 4.34E+02 | 3.92E+03 |
| IPI00331564.2 | Dld | Dihydrolipoyl dehydrogenase | 8.88 | 5.84E+01 | 5.18E+02 |
| IPI00121440.4 | Etfb | Electron transfer flavoprotein subunit beta | 8.6 | 2.91E+02 | 2.50E+03 |
| IPI00420882.3 | Ogdh | Isoform 4 of 2-oxoglutarate dehydrogenase, mitochondrial | 8.36 | 8.06E+00 | 6.73E+01 |
| IPI00453499.3 | Iars2 | Isoleucyl-tRNA synthetase, mitochondrial | 8.2 | 4.77E+01 | 3.91E+02 |
| IPI00130081.2 | Pex5 | Isoform 2 of Peroxisomal targeting signal 1 receptor | 7.42 | 3.76E+01 | 2.79E+02 |
| IPI00230138.7 | Lyn | Isoform LYN B of Tyrosine-protein kinase Lyn | 7.39 | 1.39E+02 | 1.03E+03 |
| IPI00469380.3 | Aox3 | Aldehyde oxidase 1 | 7.29 | 2.94E+02 | 2.14E+03 |
| IPI00331322.3 | Mgst1 | Microsomal glutathione S-transferase 1 | 7.06 | 1.73E+02 | 1.22E+03 |
| IPI00132799.4 | C1qbp | complement component 1 Q subcomponent-binding protein, mitochondrial | 6.46 | 1.42E+02 | 9.17E+02 |
| IPI00121788.1 | Prdx1 | Peroxiredoxin | 5.91 | 1.67E+02 | 9.90E+02 |
| IPI00676071.3 | Mosc1 | MOSC domain-containing protein 1, mitochondrial | 5.77 | 1.84E+02 | 1.06E+03 |
| IPI00111908.8 | Cps1 | Carbamoyl-phosphate synthase [ammonia], mitochondrial | 5.63 | 2.39E+04 | 1.34E+05 |
| IPI00122862.4 | Mthfd1 | C-1-tetrahydrofolate synthase, cytoplasmic | 5.37 | 7.54E+02 | 4.05E+03 |
| IPI00117312.1 | Got2 | Aspartate aminotransferase, mitochondrial | 5.28 | 1.18E+02 | 6.23E+02 |
| IPI00126625.1 | Acsm1 | Isoform 1 of Acyl-coenzyme A synthetase ACSM1, mitochondrial | 5.11 | 2.77E+02 | 1.41E+03 |
| IPI00109293.1 | Lactb | Serine beta-lactamase-like protein LACTB, mitochondrial | 5.01 | 7.79E+02 | 3.90E+03 |
| IPI00135651.1 | Slc25a13 | Calcium-binding mitochondrial carrier protein Aralar2 | 4.73 | 5.38E+02 | 2.55E+03 |
| IPI00312174.6 | Ptges2 | Microsomal prostaglandin E synthase 2 | 4.71 | 7.45E+02 | 3.50E+03 |
| IPI00380320.4 | Ldhd | Probable D-lactate dehydrogenase, mitochondrial | 4.53 | 9.83E+01 | 4.45E+02 |
| IPI00116753.4 | Etfa | Electron transfer flavoprotein subunit alpha, mitochondrial | 4.31 | 8.15E+02 | 3.51E+03 |
| IPI00137194.1 | Slc16a1 | Monocarboxylate transporter 1 | 4.26 | 8.95E+01 | 3.81E+02 |
| IPI00115117.1 | Stoml2 | Stomatin-like protein 2 | 4.12 | 5.16E+01 | 2.12E+02 |
| IPI00170363.1 | Acsl5 | Long-chain-fatty-acid-CoA ligase 5 | 3.89 | 6.02E+02 | 2.34E+03 |
| IPI00319518.4 | Lonp1 | Lon protease homolog | 3.57 | 1.04E+03 | 3.72E+03 |
| IPI00115824.1 | Nipsnap1 | Protein NipSnap homolog 1 | 3.3 | 3.86E+02 | 1.27E+03 |
| IPI00117214.3 | Hsdl2 | Hydroxysteroid dehydrogenase-like protein 2 | 3.23 | 2.22E+02 | 7.15E+02 |
| IPI00229078.5 | Hsd3b4 | 3-beta-hydroxysteroid dehydrogenase type 4 | 3.19 | 2.81E+02 | 8.96E+02 |
| IPI00120233.1 | Gcdh | Glutaryl-CoA dehydrogenase, mitochondrial | 2.98 | 2.61E+02 | 7.78E+02 |
| IPI00128286.1 | Cyp1a1 | Cytochrome P450 1A1 | 2.95 | 3.17E+02 | 9.34E+02 |
| IPI00320850.3 | Mccc1 | Methylcrotonoyl-CoA carboxylase subunit alpha mitochondrial | 2.91 | 4.45E+02 | 1.30E+03 |
| IPI00122633.3 | Acsf2 | Acyl-CoA synthetase family member 2, mitochondrial | 2.88 | 9.05E+02 | 2.61E+03 |
| IPI00114710.3 | Pcx | Pyruvate carboxylase, mitochondrial | 2.84 | 3.57E+03 | 1.01E+04 |
| IPI00133903.1 | Hspa9 | Heat shock 70 kDa protein 9 | 2.8 | 7.43E+03 | 2.08E+04 |
| IPI00136655.1 | Gcat | 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial | 2.78 | 3.48E+02 | 9.68E+02 |
| IPI00756386.1 | Dhtkd1 | 2-oxoglutarate dehydrogenase E1 component, mitochondrial | 2.78 | 6.06E+02 | 1.69E+03 |
| IPI00330754.1 | Bdh1 | 3-hydroxybutyrate dehydrogenase | 2.71 | 2.44E+03 | 6.60E+03 |
| IPI00621548.2 | Por | NADPH-cytochrome P450 reductase | 2.7 | 1.46E+03 | 3.95E+03 |
| IPI00136213.5 | Sardh | Sarcosine dehydrogenase, mitochondrial | 2.68 | 7.96E+01 | 2.14E+02 |
| IPI00379694.4 | Hmgcl | hydroxymethylglutaryl-CoA lyase, mitochondrial precursor | 2.55 | 1.44E+02 | 3.67E+02 |
| IPI00308885.6 | Hspd1 | Isoform 1 of 60 kDa heat shock protein, mitochondrial | 2.54 | 3.47E+03 | 8.81E+03 |
| IPI00139301.3 | Krt5 | Keratin, type II cytoskeletal 5 | 2.48 | 8.53E+01 | 2.12E+02 |
| IPI00461964.3 | Aldh6a1 | Methylmalonate-semialdehyde dehydrogenase, mitochondrial | 2.48 | 2.23E+03 | 5.53E+03 |
| IPI00111218.1 | Aldh2 | Aldehyde dehydrogenase, mitochondrial | 2.38 | 2.30E+03 | 5.49E+03 |
| IPI00223092.5 | Hadha | Trifunctional enzyme subunit alpha, mitochondrial | 2.37 | 1.72E+03 | 4.06E+03 |
| IPI00270326.1 | Psmc2 | 26S protease regulatory subunit 7 | 2.37 | 3.80E+01 | 8.99E+01 |
| IPI00226140.5 | Maob | Amine oxidase [flavin-containing] B | 2.36 | 7.37E+02 | 1.74E+03 |
| IPI00331436.4 | Lap3 | Isoform 1 of Cytosol aminopeptidase | 2.29 | 5.99E+01 | 1.37E+02 |
| IPI00119114.2 | Acadl | Long-chain specific acyl-CoA dehydrogenase, mitochondrial | 2.26 | 8.94E+02 | 2.02E+03 |
| IPI00116603.1 | Otc | Ornithine carbamoyltransferase, mitochondrial | 2.23 | 6.57E+02 | 1.47E+03 |
| IPI00132042.1 | Pdhb | Pyruvate dehydrogenase E1-beta subunit, mitochondrial | 2.23 | 1.32E+03 | 2.96E+03 |
| IPI00113052.1 | Tsfm | Elongation factor Ts, mitochondrial | 2.22 | 1.09E+02 | 2.41E+02 |
| IPI00118384.1 | Ywhae | 14-3-3 protein epsilon | 2.21 | 7.79E+02 | 1.72E+03 |
| IPI00331555.2 | Bckdha | 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial | 2.17 | 8.44E+03 | 1.83E+04 |
| IPI00322610.5 | Coasy | Bifunctional coenzyme A synthase | 2.15 | 1.11E+02 | 2.39E+02 |
| IPI00132762.1 | Trap1 | Heat shock protein 75 kDa, mitochondrial | 2.14 | 2.70E+03 | 5.77E+03 |
| IPI00322760.7 | Prodh | Proline dehydrogenase, mitochondrial | 2.14 | 2.35E+03 | 5.03E+03 |
| IPI00112549.1 | Acsl1 | Long-chain specific acyl-CoA synthetase 1 | 2.09 | 4.20E+03 | 8.78E+03 |
| IPI00323357.3 | Hspa8 | Heat shock cognate 71 kDa protein | 2.07 | 2.55E+03 | 5.27E+03 |
| IPI00134746.5 | Ass1 | Argininosuccinate synthase | 2.02 | 1.47E+03 | 2.96E+03 |
| IPI00121105.2 | Hadh | Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial | 2.01 | 1.53E+02 | 3.06E+02 |
| IPI00131445.2 | Dnm2 | Isoform 1 of Dynamin-2 GTPase | 1.95 | 1.89E+02 | 3.70E+02 |
| IPI00678532.3 | Fam82a2 | Regulator of microtubule dynamics protein 3 | 1.92 | 1.68E+02 | 3.22E+02 |
| IPI00130535.1 | Dbt | Lipoamide acyltransferase of branched-chain alpha-keto acid dehydrogenase complex | 1.9 | 1.53E+03 | 2.90E+03 |
| IPI00130804.1 | Ech1 | Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial | 1.88 | 3.75E+02 | 7.07E+02 |
| IPI00119203.4 | Acadvl | Very long-chain specific acyl-CoA dehydrogenase, mitochondrial | 1.87 | 3.41E+03 | 6.36E+03 |
| IPI00122075.1 | Mavs | Mitochondrial antiviral-signaling protein | 1.86 | 4.93E+02 | 9.15E+02 |
| IPI00134809.2 | Dlst | Succinyltransferase component of 2-oxoglutarate dehydrogenase complex | 1.85 | 4.85E+02 | 8.97E+02 |
| IPI00119808.1 | Clpx | ATP-dependent ClpX-like protease, mitochondrial | 1.84 | 1.06E+03 | 1.95E+03 |
| IPI00169862.1 | Coq9 | Ubiquinone biosynthesis protein COQ9, mitochondrial | 1.78 | 9.68E+02 | 1.73E+03 |
| IPI00127841.3 | Slc25a5 | ADP/ATP translocase 2 | 1.77 | 7.18E+02 | 1.27E+03 |
| IPI00131177.1 | Letm1 | LETM1 and EF-hand domain-containing protein 1, mitochondrial | 1.75 | 1.26E+03 | 2.20E+03 |
| IPI00408961.3 | Haao | 3-hydroxyanthranilate 3,4-dioxygenase | 1.73 | 1.06E+02 | 1.83E+02 |
| IPI00387491.1 | Aass | Alpha-aminoadipic semialdehyde synthase, mitochondrial | 1.7 | 5.45E+02 | 9.27E+02 |
| IPI00120123.1 | Dmgdh | Dimethylglycine dehydrogenase, mitochondrial | 1.7 | 1.07E+03 | 1.82E+03 |
| IPI00459487.3 | Suclg2 | Isoform 1 of Succinyl-CoA ligase subunit beta, mitochondrial | 1.69 | 1.61E+03 | 2.72E+03 |
| IPI00135231.2 | Idh1 | Isocitrate dehydrogenase | 1.66 | 5.24E+02 | 8.70E+02 |
| IPI00317074.3 | Slc25a10 | Mitochondrial dicarboxylate carrier | 1.61 | 1.89E+02 | 3.05E+02 |
| IPI00115564.5 | Slc25a4 | ADP/ATP translocase 1 | 1.6 | 7.06E+02 | 1.13E+03 |
| IPI00116498.1 | Ywhaz | 14-3-3 protein zeta/delta | 1.58 | 6.25E+02 | 9.89E+02 |
| IPI00127625.1 | Hmgcl | Hydroxymethylglutaryl-CoA lyase, mitochondrial | 1.56 | 8.03E+02 | 1.25E+03 |
| IPI00113886.1 | Lmnb2 | Lamin B2 isoform | 1.55 | 1.13E+03 | 1.76E+03 |
| IPI00110684.1 | Ppa1 | inorganic pyrophosphatase | 1.55 | 3.81E+01 | 5.92E+01 |
| IPI00130280.1 | Atp5a1 | ATP synthase subunit alpha, mitochondrial | 1.53 | 1.51E+04 | 2.32E+04 |
| IPI00230108.6 | Pdia3 | Protein disulfide-isomerase A3 | 1.53 | 4.26E+03 | 6.52E+03 |
| IPI00113869.1 | Bsg | Isoform 2 of Basigin | 1.53 | 1.47E+02 | 2.24E+02 |
| IPI00119842.1 | Acadsb | Short/branched chain acyl-CoA dehydrogenase, mitochondrial | 1.53 | 8.58E+01 | 1.32E+02 |
Fig. 5.
Summary of phosphorylated mitochondrial proteins in WT mice exposed to CCl4 for 2 h. Various functions of mitochondrial proteins that were phosphorylated in CCl4-exposed mouse liver and identified by mass spectrometry are summarized. The activities of the three proteins marked in blue and bold characters were suppressed in CCl4-exposed mice compared to the corresponding vehicle-controls. (For interpretation of the references to color in this figure legend, the reader is referred to the web version of this article.)
3.5. JNK-mediated phosphorylation and activity changes of the selected mitochondrial proteins
To further evaluate the causal roles of phosphoproteins in hepatotoxicity, we determined the phosphorylation status and activity changes in the three randomly-selected proteins ALDH2, NdufS1 (a 75-kDa subunit of mitochondrial complex I), and α-KGDH in control and CCl4-exposed mice in the absence or presence of SU3327 pretreatment. We performed immunoprecipitation by using the specific antibody against each target protein. The immunoprecipitated proteins were then subjected to immunoblot analysis with anti-p-Ser-Pro antibody or antibody against each protein. Immunoblot results showed that the mitochondrial levels of ALDH2 remained same regardless of SU3327 pretreatment (Fig. 6A, top panel). ALDH2, un-phosphorylated in the untreated control (middle panel, first lane), was phosphorylated in CCl4-exposed mice (second lane), despite the similar levels of immunoprecipitated ALDH2 protein for each lane (bottom panel). However, the intensity of phosphorylated ALDH2 was markedly reduced upon SU3327 pretreatment (middle panel, third lane), suggesting reversible phosphorylation of ALDH2, depending on the JNK activity. Consistently, the ALDH2 activity in the mitochondrial extracts was significantly suppressed in WT mice exposed to CCl4 for 2 h compared to the control group, but its suppressed activity was restored in SU3327-pretreated mice (Fig. 6B).
Fig. 6.
Selected mitochondrial proteins are phosphorylated and their activities suppressed by p-JNK. (A) The level of mitochondrial ALDH2 in control and CCl4-exposed WT mice in the absence or presence of SU3327 pretreatment was determined by immunoblot analysis (top panel). Mitochondrial proteins (0.5 mg/analysis) from vehicle-control and mice exposed to CCl4 for 2 h in the absence or presence of SU3327 were immunoprecipitated with anti-ALDH2 antibody and then subjected to immunoblot analysis with anti-p-Ser-Pro antibody (middle) or anti-ALDH2 antibody (bottom). (B) ALDH2 activity in mitochondrial extracts (0.1 mg protein/assay) for the indicated groups with or without SU3327 pretreatment was determined. Additional analyses were conducted on NdufS1 (complex I) (C, D) and α-KGDH (E, F), as indicated. *, Significantly different (p<0.05) from the other groups.
In addition, the levels of NdufS1 were similar in differently-treated mice regardless of SU3327 pretreatment (Fig. 6C, top panel). NdufS1 phosphorylation was markedly increased in CCl4-exposed WT mice (middle panel, second lane), compared to the untreated control (first lane). The intensity of the phosphorylated protein band was markedly reduced in SU3327-pretreated mice (third lane). Consistently, the mitochondrial complex I activity was significantly decreased in CCl4-exposed WT mice compared with those of control (Fig. 6D). Furthermore, the decreased activity was restored in the SU3327-pretreated group.
Similar patterns of reversible phosphorylation (Fig. 6E) and activity change (Fig. 6F) in α-KGDH were observed in CCl4-exposed mice in the absence or presence of SU3327. These results (Fig. 6) not only substantiate the presence of phosphoproteins determined by mass spectrometry but also support that JNK-mediated phosphorylation of certain mitochondrial proteins is responsible for the suppressed activities at 2 h, contributing to CCl4-induced mitochondrial dysfunction and liver injury observed at later time points (e.g., at 24 h as shown in Fig. 1).
Activated p-JNK can phosphorylate pro-apoptotic Bax to promote mitochondrial permeability transition (MPT) change and cell damage [15], [38]. Our results showed that time-dependent mitochondrial translocation of Bax and subsequent release of cytochrome C were maximal at 2 h post-CCl4 injection (Fig. 7A). However, these events were significantly blocked by the SU3327 treatment (Fig. 7B). Consistently, CCl4 exposure significantly increased time-dependent mitochondrial swelling (Fig. 7C), which was significantly prevented by SU3327 pretreatment (Fig. 7D), supporting JNK-dependent MPT change and mitochondrial dysfunction, prior to hepatotoxicity.
Fig. 7.
Time-dependent changes in Bax, cytochrome C, and mitochondrial swelling in CCl4-exposed mice. WT mice were exposed to CCl4 alone for indicated time points (A, C) or only for 2 h in the absence or presence of SU3327 pretreatment (B, D) before tissue collection. (A, B) Time-dependent changes in the cytosolic or mitochondrial amounts of Bax and cytochrome C are presented after determining their levels by immunoblot analysis using the specific antibody to each protein. (C, D) Time-dependent changes in the mitochondrial swelling index for the indicated samples are presented. *,#, Significantly different (p<0.05) from the other groups.
4. Discussion
Molecular mechanisms of acute liver injury caused by many compounds including FDA-approved drugs such as APAP and troglitazone, an anti-diabetic agent, have been actively studied because of severe mitochondrial dysfunction and hepatotoxicity [1], [2], [3], [4], [39], [40], [41], [42], [43]. Many abused substances including cocaine and amphetamine derivatives are also known to cause mitochondrial dysfunction and acute hepatotoxicity [44], [45] especially in people who drink alcohol [44]. From the experimental models, many different mechanisms have been proposed to explain the acute hepatotoxicity. These mechanisms include: production of reactive metabolites and protein adducts, increased oxidative/nitrative stress, protein modifications and subsequent mitochondrial dysfunction, lipid peroxidation, inflammation through activation of innate immune responses, toxic ceramide production, activation of the cell death pathways, suppression of the cell proliferation/survival pathway, etc. [45], [46], [47], [48]. In general, all these mechanisms work together toward tissue injury, as recently discussed [47], [48].
Activation of JNK alone or in combination with p38K is responsible for promoting cell death [10], [11]. Other laboratories and we reported the critical role of JNK activation in drug-induced acute hepatotoxicity [12], [13], [14], [15], [37], [38], [39] and ischemia-reperfusion injury [16]. Although JNK was the main MAPK activated by CCl4 exposure [17], [36] and in our current study (Fig. 1, Fig. 3), another report suggested that activated JNK did not seem to be critical in CCl4-mediated liver injury through evaluation with the ATP-competitive JNK inhibitor SP600125 and the JNK peptide inhibitor-1 (D-JNKI-1), which interferes with the interaction between JNK and its substrates [13]. The negative role of JNK in CCl4-related hepatotoxicity [13] could result from: (1) the additional activity of SP600125 and its non-specific inhibition of other protein kinases [49], [50], [51], [52]; (2) potential compensatory mechanisms between the JNK1 and JNK2 isoforms in the liver; (3) potential toxicity of SP600125 by itself in some cases [53]; (4) a relatively high dosage of CCl4 in a different mouse strain used for the previous study [13] compared to this current study; and (5) no usage of other selective JNK inhibitors such as SU3327 and BI-78D3 [20], [21], [22]. Furthermore, to our knowledge, the identities and functional roles of mitochondrial phosphoprotein targets of active p-JNK have never been studied systematically. Therefore, in the current study, we aimed to re-evaluate the role of JNK in promoting liver injury caused by CCl4, as a model of acute hepatotoxicity, by carefully studying the time-dependent JNK activation and the levels of its mitochondrial phosphoprotein targets, lipid peroxides and liver injury with two newly-developed highly-specific JNK inhibitors SU33327 [20] and BI-78D3 [21], [22]. Since APAP can cause liver injury by promoting protein nitration [54], [55] in addition to JNK-mediated protein phosphorylation [12], [13], we intentionally chose to use CCl4 in this study to re-investigate the roles of JNK activation and JNK-mediated protein phosphorylation at early time points prior to mitochondrial dysfunction and acute liver injury, based on the relatively selective activation of JNK by CCl4 [17], [36]. We now provide evidence that p-JNK activated at earlier time points plays a pivotal role in promoting CCl4-induced mitochondrial dysfunction and hepatotoxicity through phosphorylation of many mitochondrial proteins and inactivation of their functions. However, these events were markedly reduced in the presence of the two new JNK-specific inhibitors SU3327 (Fig. 3, Fig. 4, Fig. 6) and BI-78D3 (not shown). Furthermore, neither JNK activation nor hepatotoxicity was observed in CCl4-exposed Cyp2e1-null mice despite the same treatment of CCl4 (Fig. 2). We also showed that prompt JNK activation, translocation of active p-JNK to mitochondria, and protein phosphorylation likely represent the critical events in CCl4-mediated hepatotoxicity than lipid peroxidation [5], [6], nitrative stress [54], [55], and TNFα-associated inflammation, as previously suggested [13], [35], since these latter factors were elevated only at 24 h post-CCl4 exposure (Fig. 1 and data not shown). Based on these time-dependent observations, we believe that lipid peroxidation and inflammation likely reflect the consequences rather than the causes of hepatotoxicity. Furthermore, the results with Cyp2e1-null mice (Fig. 2) and mito-TEMPO (Fig. 4) indicate that CYP2E1-mediated CCl4 metabolism induces oxidative stress, which can rapidly activate JNK (Fig. 2) resulting from inhibition of MAPK phosphatases through oxidative modifications of their active site Cys and other critical Cys residues, as recently reviewed [48]. Activated p-JNK then translocates to mitochondria and phosphorylates many proteins including mitochondrial complex I, resulting in suppression of the mitochondrial electron transport chain, and thus markedly elevating oxidative stress, which ultimately contributes to mitochondrial dysfunction and hepatotoxicity with increased lipid peroxidation observed at later time points.
In addition, JNK was reported to promote cell death through phosphorylating Bax, which contributes to mitochondrial permeability transition (MPT) change (swelling) and apoptosis [15], [39]. It is well-established that activated p-JNK translocates to mitochondria upon exposure to various toxic stimulants such as staurosporine, ionizing radiation, UV [15] and anisomycin [56]. Hanawa et al. reported that activated p-JNK was translocated to mitochondria to induce MPT and inhibit mitochondrial respiration, leading to acute hepatocyte injury in APAP-exposed mice [39]. Our previous report also showed that p-JNK was activated in CCl4-exposed rats and translocated to mitochondria where it could phosphorylate mitochondrial ALDH2 [18]. However, to our knowledge, the JNK-target proteins in mitochondria are poorly understood, although PDH E1α and β subunits, Hsp60 and ATP synthase were phosphorylated by active p-JNK in an in vitro system [19]. Therefore, another aim of this study was to systematically identify mitochondrial target proteins that are phosphorylated by p-JNK and study their contributing roles in CCl4-related mitochondrial dysfunction and hepatotoxicity. By using mass-spectral analysis of the affinity-purified phosphoproteins (with more than 2 different peptides identified by mass spectrometry) and using subtraction phospho-proteomics with the ratio of CCl4/control greater than 1.5, we found that at least 106 mitochondrial proteins, including ALDH2, NAD+-ubiquinone-dehydrogenase, α-KGDH, etc were likely phosphorylated (Table 1). Although our result also confirmed the small list of JNK-target phosphoproteins from the in vitro experiment [19], we believe that the actual number of JNK-target proteins in mitochondria could be a lot more than what we identified in this study, since the JNK-target proteins existing in small amounts, such as Bax [15] and Sab [57], [58], may not be detected due to the detection limit of our mass-spectral analysis. Despite this disadvantage, by using immunoprecipitation followed by immunoblot with anti-phospho-Ser-Pro antibody, we confirmed JNK-mediated phosphorylation of the three selected target proteins in CCl4-exposed mice. Furthermore, we demonstrate the functional roles of some of the phosphoproteins since the suppressed activities of these proteins were restored by JNK inhibitor SU3327 pretreatment. We expect that the activities of other phosphorylated proteins in CCl4-exposed mice could be also modulated through JNK-mediated phosphorylation.
The mechanisms of CCl4-induced mitochondrial dysfunction have not been fully understood despite previous efforts [5], [6]. Based on our results of the suppressed activities of phosphorylated mitochondrial proteins despite similar protein levels (Fig. 6), post-translational modifications of mitochondrial proteins by p-JNK activated at earlier time points (Fig. 2) are at least partially responsible for CCl4-induced mitochondrial dysfunction prior to hepatotoxicity. Our results showed that α-KGDH and complex I, involved in cell energy supply, were suppressed in CCl4-exposed tissues compared to control. ALDH2, involved in anti-oxidant defense, was also suppressed following CCl4 exposure. Since JNK activation and phosphorylation occurred earlier (e.g., 1 or 2 h) and led to inactivation of ALDH2, complex I, and α-KGDH, their suppression was likely to promote mitochondrial dysfunction, contributing to increased MPT [38], and eventually liver injury observed at 24 h post-injection. Although we have not tested many other phosphoproteins, it is likely that the activities of some of the phosphorylated mitochondrial proteins may be modulated in a JNK-dependent manner. Thus, our current study provides a novel mechanism for CCl4-induced mitochondrial dysfunction and hepatotoxicity through JNK-mediated phosphorylation of many mitochondrial proteins
Although we have purified and identified phosphorylated mitochondrial proteins by mass-spectral analysis, we do not know specific phosphorylation sites yet. The canonical JNK binding motif sequence is: R/K2–3-X1–6-L/I-X-L/I [59]. Based on the comparative sequence analysis between mitochondrial ALDH2 and cytosolic ALDH1, we reported that 463Ser-Pro of ALDH2 could be the prime site of JNK-mediated phosphorylation [18]. We also observed that 75 kDa-subunit NdufS1 subunit of complex I was phosphorylated after CCl4 exposure. This protein also contains one putative JNK binding site at 515K-R-N-P-P-K-M-L-F-L, and four potential phosphorylation sites (Ser411-Pro, Ser425-Pro, Thr588-Pro, Ser627-Pro) by active p-JNK. Sequence analysis revealed that α-KGDH contains one canonical JNK binding motif at 376K-K-V-M-S-I-L-L, and eight potential phosphorylation sites (Ser55-Pro, Thr215-Pro, Ser433-Pro, Ser562-Pro, Ser711-Pro, Thr809-Pro, Thr833-Pro, Ser909-Pro) by p-JNK. However, the exact sites of phosphorylation in these proteins remain to be established.
In conclusion, by studying temporal changes in JNK activation, lipid peroxidation, pro-inflammatory TNF-α levels and histological liver damage following CCl4 administration, we demonstrated the critical role of JNK activation and subsequent protein phosphorylation in chemical-induced mitochondrial dysfunction and acute hepatotoxicity. We have affinity-purified phosphorylated mitochondrial proteins from CCl4-exposed mouse liver and control tissues and determined their identities by mass-spectral analysis. Our results revealed that many mitochondrial proteins were phosphorylated by p-JNK and that their cellular functions could be altered, contributing to mitochondrial dysfunction and hepatotoxicity. By using two new JNK-specific inhibitors SU3327 and BI-78D3, which potently blocked JNK without affecting ERK activity, we also showed that the activities of the selected phosphorylated mitochondrial proteins and hepatotoxicity were reversibly modulated in a JNK-dependent manner, suggesting a causal relationship between JNK-mediated phosphorylation of mitochondrial proteins and their functions. These data demonstrate for the first time an important role of JNK-mediated phosphorylation of many mitochondrial proteins in promoting chemical-induced mitochondrial dysfunction and acute liver injury.
Disclosure
All authors do not have conflict of interest.
Acknowledgments
This study was supported by the Intramural Research Program of National Institute of Alcohol Abuse and Alcoholism (NIAAA) and in part with funds from the Intramural Fund of National Center for Toxicological Research, U.S. Food and Drug Administration (NCTR/FDA). The views presented in this article do not necessarily reflect those of the U.S. Food and Drug Administration. The authors are also grateful to Drs. Youngshim Choi and Klaus Gawrisch for the excellent technical help and support for this study, respectively.
Footnotes
Supplementary data associated with this article can be found in the online version at doi:10.1016/j.redox.2015.09.040.
Contributor Information
Sehwan Jang, Email: sehwan.jang@upr.edu.
Li-Rong Yu, Email: Lirong.Yu@fda.hhs.gov.
Mohamed A. Abdelmegeed, Email: abdelmegeedm@mail.nih.gov.
Yuan Gao, Email: yuangao2000@gmail.com.
Atrayee Banerjee, Email: atrayee.liver@gmail.com.
Byoung-Joon Song, Email: bj.song@nih.gov.
Appendix A. Supplementary material
Supplementary material
References
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