In the title compound compound, the phenyl and pyrimidine rings are inclined to one another at 31.72 (6)°. The residues are associated into ribbons parallel to [110] by three classical hydrogen bonds. Adjacent ribbons are connected by translation parallel to the c axis by a ‘weak’ hydrogen bond to form a layer structure parallel to (1-10), while a further contact connects the residues in the third dimension.
Keywords: crystal structure, pyrimidine, bromobenzenesulfonamide, hydrogen bonding
Abstract
The title compound, C12H10BrN5O3S2·C3H7NO, displays an almost planar amine group. The interplanar angle between the rings is 31.72 (6)°. The residues are associated into ribbons parallel to [110] by three classical hydrogen bonds; one from each amine Hamine to ODMF and one from NHamide to Ooxo. Adjacent ribbons are connected by translation parallel to the c axis by a ‘weak’ hydrogen bond Hmethyl⋯Osulfonyl to form a layer structure parallel to (1-10), while a further contact Hbromophenyl⋯Osulfonyl connects the residues in the third dimension.
Chemical context
We are conducting studies directed towards exploring the synthetic potential of dimethyl N-cyanoimido-S,S-dimethyl-dithiocarbonate and other ketene dithioacetals for synthesizing new classes of antimetabolites (Elgemeie & Mohamed, 2014 ▸; Elgemeie et al., 2007 ▸, 2009 ▸). We have recently reported various successful approaches to the synthesis of mercaptopyrimidines by the reaction of this compound with active methylene functions (Elgemeie & Sood, 2001 ▸; Elgemeie et al., 2003 ▸). In an extension of this work, we describe a one-pot synthesis of N-(2-amino-5-cyano-4-(methylthio)-6-oxopyrimidin-1(6H)-yl)-4-bromobenzenesulfonamide (I) by the reaction of dimethyl N-cyanodithioiminocarbonate with N′-(4-bromophenyl)sulfonyl-2-cyanoethanehydrazide. The chemical nature was proposed on the basis of elemental analysis and spectroscopic data and its X-ray structure determination was undertaken to confirm the nature of the product. We have recently presented the structure of a related pyrimidine (Elgemeie et al., 2015 ▸).
Structural commentary
The structure of the title compound, which proved to be the dimethylformamide solvate (I)·DMF, is shown in Fig. 1 ▸. The ring systems are as expected almost planar, with r.m.s. deviations of 0.002 Å for the phenyl and 0.04 Å for the pyrimidine ring. The substituent atoms N4 and S1 deviate significantly from the pyrimidine plane [by 0.199 (2) and 0.257 (2) Å respectively, to opposite sides of the plane]. The interplanar angle is 31.72 (6)°, and is also associated with the torsion angles C12—C11—S2—N2 88.10 (12), C11—S2—N2—N1 78.98 (11) and S2—N2—N1—C2 100.31 (12)°. The amino group at N4 is almost planar, with the nitrogen atom lying just 0.035 (11) Å out of the plane of its substituents.
Figure 1.
The formula unit of compound (I)·DMF in the crystal. Displacement ellipsoids correspond to 50% probability levels. The hydrogen bond H03⋯O4 is drawn as a thin dashed line.
Supramolecular features
The components are associated into ribbons parallel to [110] (Fig. 2 ▸) by three classical hydrogen bonds (Table 1 ▸). Two of these, H02⋯O4(1 − x, −y, 1 − z) and H03⋯O4, involve the dimethylformamide oxygen atom and lead to the formation of inversion-symmetric rings of graph set
(8). The third hydrogen bond, H01⋯O1(2 − x, 1 − y, 1 − z), also forms inversion-symmetric rings, but of graph set
(10).
Figure 2.
Packing diagram of compound (I)· DMF viewed perpendicular to (1
0). For clarity, only the ipso carbons of the bromophenyl groups are shown. Classical hydrogen bonds are indicated by dashed lines.
Table 1. Hydrogen-bond geometry (, ).
| DHA | DH | HA | D A | DHA |
|---|---|---|---|---|
| N2H01O1i | 0.80(2) | 2.00(2) | 2.7784(15) | 165.5(19) |
| N4H02O4ii | 0.86(2) | 1.98(2) | 2.8382(16) | 177.9(19) |
| N4H03O4 | 0.85(2) | 2.07(2) | 2.8005(16) | 143.1(18) |
| C12H12O2iii | 0.95 | 2.46 | 3.4096(18) | 173 |
| C7H7BO3iv | 0.98 | 2.45 | 3.2848(19) | 143 |
| C17H17Br1v | 0.95 | 3.05 | 3.6686(15) | 124 |
Symmetry codes: (i)
; (ii)
; (iii)
; (iv)
; (v)
.
There are two short and acceptably linear C—H⋯O contacts that may be assumed to represent ‘weak’ hydrogen bonds; H7B⋯O3 connects neighbouring ribbons by translation parallel to the c axis, thus completing a layer structure parallel to (1
0), while H12⋯O2 connects the residues in the third dimension via the inversion operator (1 − x, 1 − y, 1 − z).
The bromine atom is involved in two secondary contacts: a halogen bond of 3.4582 (10) Å with O1(2 − x, 2 − y,1 − z) and a weak hydrogen bond of 3.05 Å from H17(x, 1 + y, z), with an angle of 124° at hydrogen. These interactions also connect the residues in the third dimension.
Synthesis and crystallization
Dimethyl N-cyanoimido-S,S-dimethyl-dithiocarbonate (0.01 mol) was added to a stirred solution of N′-(4-bromophenyl)sulfonyl-2-cyanoethanehydrazide (0.01 mol) in dry dioxane (50 mL) containing potassium hydroxide (0.01 mol) at room temperature. The reaction mixture was stirred for 30 min at room temperature; the precipitated solid was collected by filtration and crystallized from dimethyl formamide to give pale yellow crystals, m.p. 483–485 K, yield 85%.
Refinement
Crystal data, data collection and structure refinement details are summarized in Table 2 ▸. The NH hydrogens were refined freely. The methyl groups were refined as idealized rigid groups allowed to rotate but not tip. Other H were included using a riding model starting from calculated positions [C—H = 0.95–0.98 Å with U iso(H) = 1.5U eq(C) for methyl H atoms and 1.2U eq(C) for other H atoms].
Table 2. Experimental details.
| Crystal data | |
| Chemical formula | C12H10BrN5O3S2C3H7NO |
| M r | 489.38 |
| Crystal system, space group | Triclinic, P
|
| Temperature (K) | 100 |
| a, b, c () | 9.1107(4), 9.9911(4), 11.6498(6) |
| , , () | 96.482(4), 107.802(4), 99.322(4) |
| V (3) | 981.33(8) |
| Z | 2 |
| Radiation type | Mo K |
| (mm1) | 2.34 |
| Crystal size (mm) | 0.45 0.40 0.40 |
| Data collection | |
| Diffractometer | Oxford Diffraction Xcalibur, Eos |
| Absorption correction | Multi-scan (CrysAlis PRO; Agilent, 2013 ▸) |
| T min, T max | 0.824, 1.000 |
| No. of measured, independent and observed [I > 2(I)] reflections | 52130, 5844, 5306 |
| R int | 0.031 |
| (sin /)max (1) | 0.722 |
| Refinement | |
| R[F 2 > 2(F 2)], wR(F 2), S | 0.027, 0.061, 1.06 |
| No. of reflections | 5844 |
| No. of parameters | 268 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| max, min (e 3) | 0.76, 0.39 |
Supplementary Material
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S2056989015018903/lh5790sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015018903/lh5790Isup2.hkl
Supporting information file. DOI: 10.1107/S2056989015018903/lh5790Isup3.cml
CCDC reference: 1430044
Additional supporting information: crystallographic information; 3D view; checkCIF report
supplementary crystallographic information
Crystal data
| C12H10BrN5O3S2·C3H7NO | Z = 2 |
| Mr = 489.38 | F(000) = 496 |
| Triclinic, P1 | Dx = 1.656 Mg m−3 |
| Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
| a = 9.1107 (4) Å | Cell parameters from 16424 reflections |
| b = 9.9911 (4) Å | θ = 2.6–30.4° |
| c = 11.6498 (6) Å | µ = 2.34 mm−1 |
| α = 96.482 (4)° | T = 100 K |
| β = 107.802 (4)° | Block, colourless |
| γ = 99.322 (4)° | 0.45 × 0.40 × 0.40 mm |
| V = 981.33 (8) Å3 |
Data collection
| Oxford Diffraction Xcalibur, Eos diffractometer | 5844 independent reflections |
| Radiation source: Enhance (Mo) X-ray Source | 5306 reflections with I > 2σ(I) |
| Graphite monochromator | Rint = 0.031 |
| Detector resolution: 16.1419 pixels mm-1 | θmax = 30.9°, θmin = 2.4° |
| ω–scan | h = −12→13 |
| Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2013) | k = −14→14 |
| Tmin = 0.824, Tmax = 1.000 | l = −16→16 |
| 52130 measured reflections |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.027 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.061 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.06 | w = 1/[σ2(Fo2) + (0.0248P)2 + 0.6489P] where P = (Fo2 + 2Fc2)/3 |
| 5844 reflections | (Δ/σ)max = 0.001 |
| 268 parameters | Δρmax = 0.76 e Å−3 |
| 0 restraints | Δρmin = −0.39 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.Non-bonded contact:3.4582 (0.0010) Br1 - O1_$6Operator for generating equivalent atoms: $6 - x + 2, -y + 2, -z + 1============================================================================Least-squares planes (x,y,z in crystal coordinates) and deviations from them (* indicates atom used to define plane)8.0547 (0.0765) x - 4.9253 (0.0915) y + 0.8579 (0.2093) z = 4.7396 (0.0731)* 0.0000 (0.0001) C2 * 0.0000 (0.0001) H02 * 0.0000 (0.0000) H03 0.0352 (0.0108) N4Rms deviation of fitted atoms = 0.00007.4457 (0.0028) x - 5.9260 (0.0044) y + 1.6748 (0.0062) z = 4.4689 (0.0045)Angle to previous plane (with approximate e.s.d.) = 7.74 (1.41)* -0.0578 (0.0009) N1 * 0.0522 (0.0009) C2 * 0.0025 (0.0009) N3 * -0.0485 (0.0010) C4 * 0.0394 (0.0010) C5 * 0.0122 (0.0009) C6 0.1986 (0.0021) N4 - 0.2565 (0.0018) S1 - 0.3373 (0.0028) C7 0.1276 (0.0023) C8 0.2186 (0.0028) N5 0.0409 (0.0018) O1 - 0.0581 (0.0020) N2Rms deviation of fitted atoms = 0.04116.0229 (0.0041) x - 2.3534 (0.0057) y + 5.9679 (0.0059) z = 4.9873 (0.0043)Angle to previous plane (with approximate e.s.d.) = 31.72 (0.06)* -0.0028 (0.0010) C11 * 0.0004 (0.0010) C12 * 0.0025 (0.0010) C13 * -0.0031 (0.0010) C14 * 0.0007 (0.0010) C15 * 0.0023 (0.0010) C16 - 0.0142 (0.0020) Br1 0.0055 (0.0019) S2Rms deviation of fitted atoms = 0.0022 |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| S1 | 0.74640 (5) | 0.49517 (4) | 0.94893 (3) | 0.02271 (8) | |
| S2 | 0.64492 (4) | 0.41433 (3) | 0.34915 (3) | 0.01389 (7) | |
| Br1 | 0.903097 (18) | 1.043895 (15) | 0.333551 (15) | 0.02167 (5) | |
| N1 | 0.78069 (13) | 0.40042 (11) | 0.57992 (10) | 0.0118 (2) | |
| C2 | 0.70629 (16) | 0.30239 (14) | 0.62952 (12) | 0.0132 (2) | |
| N2 | 0.77711 (15) | 0.36204 (12) | 0.45978 (10) | 0.0130 (2) | |
| H01 | 0.863 (2) | 0.3749 (19) | 0.4545 (17) | 0.020 (5)* | |
| N3 | 0.69682 (14) | 0.33056 (12) | 0.74159 (11) | 0.0151 (2) | |
| C4 | 0.77293 (17) | 0.45373 (14) | 0.80858 (12) | 0.0147 (3) | |
| C5 | 0.87008 (16) | 0.55054 (14) | 0.77173 (12) | 0.0142 (2) | |
| C6 | 0.87526 (15) | 0.52734 (13) | 0.65034 (12) | 0.0122 (2) | |
| C7 | 0.6131 (2) | 0.34218 (18) | 0.95215 (15) | 0.0254 (3) | |
| H7A | 0.5211 | 0.3215 | 0.8774 | 0.038* | |
| H7B | 0.5787 | 0.3573 | 1.0236 | 0.038* | |
| H7C | 0.6669 | 0.2646 | 0.9572 | 0.038* | |
| C8 | 0.96232 (18) | 0.67418 (15) | 0.85179 (13) | 0.0186 (3) | |
| N4 | 0.64153 (15) | 0.17814 (13) | 0.56513 (12) | 0.0169 (2) | |
| H02 | 0.597 (2) | 0.119 (2) | 0.5990 (18) | 0.024 (5)* | |
| H03 | 0.633 (2) | 0.159 (2) | 0.4900 (19) | 0.025 (5)* | |
| N5 | 1.03702 (19) | 0.77174 (15) | 0.91924 (14) | 0.0298 (3) | |
| O1 | 0.95091 (12) | 0.60446 (10) | 0.60406 (9) | 0.01553 (19) | |
| O2 | 0.50567 (12) | 0.40373 (11) | 0.38292 (10) | 0.0196 (2) | |
| O3 | 0.64611 (14) | 0.33408 (11) | 0.23994 (9) | 0.0215 (2) | |
| C11 | 0.71531 (16) | 0.58768 (14) | 0.34507 (12) | 0.0140 (2) | |
| C12 | 0.68353 (17) | 0.69127 (15) | 0.41854 (13) | 0.0162 (3) | |
| H12 | 0.6237 | 0.6690 | 0.4703 | 0.019* | |
| C13 | 0.74062 (17) | 0.82758 (15) | 0.41502 (13) | 0.0175 (3) | |
| H13 | 0.7206 | 0.8999 | 0.4646 | 0.021* | |
| C14 | 0.82751 (17) | 0.85737 (15) | 0.33814 (13) | 0.0167 (3) | |
| C15 | 0.86007 (17) | 0.75425 (15) | 0.26524 (13) | 0.0179 (3) | |
| H15 | 0.9202 | 0.7767 | 0.2137 | 0.021* | |
| C16 | 0.80332 (17) | 0.61764 (15) | 0.26891 (13) | 0.0162 (3) | |
| H16 | 0.8244 | 0.5454 | 0.2199 | 0.019* | |
| N6 | 0.33893 (15) | 0.04126 (13) | 0.14664 (11) | 0.0182 (2) | |
| O4 | 0.50814 (13) | 0.02165 (11) | 0.32929 (10) | 0.0198 (2) | |
| C17 | 0.48080 (18) | 0.04576 (14) | 0.22375 (13) | 0.0174 (3) | |
| H17 | 0.5681 | 0.0692 | 0.1963 | 0.021* | |
| C18 | 0.2020 (2) | 0.0087 (2) | 0.18574 (17) | 0.0322 (4) | |
| H18A | 0.1941 | −0.0837 | 0.2071 | 0.048* | |
| H18B | 0.1066 | 0.0117 | 0.1191 | 0.048* | |
| H18C | 0.2132 | 0.0762 | 0.2574 | 0.048* | |
| C19 | 0.3164 (2) | 0.08261 (18) | 0.02765 (15) | 0.0274 (3) | |
| H19A | 0.4184 | 0.1036 | 0.0146 | 0.041* | |
| H19B | 0.2700 | 0.1646 | 0.0248 | 0.041* | |
| H19C | 0.2456 | 0.0075 | −0.0366 | 0.041* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| S1 | 0.0325 (2) | 0.02259 (18) | 0.01318 (16) | 0.00060 (15) | 0.01114 (15) | 0.00105 (13) |
| S2 | 0.01596 (16) | 0.01541 (15) | 0.01050 (14) | 0.00078 (12) | 0.00523 (12) | 0.00418 (11) |
| Br1 | 0.02029 (8) | 0.01729 (7) | 0.02730 (9) | 0.00028 (5) | 0.00798 (6) | 0.00829 (6) |
| N1 | 0.0146 (5) | 0.0130 (5) | 0.0090 (5) | 0.0013 (4) | 0.0062 (4) | 0.0024 (4) |
| C2 | 0.0140 (6) | 0.0143 (6) | 0.0120 (6) | 0.0018 (5) | 0.0050 (5) | 0.0048 (5) |
| N2 | 0.0151 (6) | 0.0159 (5) | 0.0107 (5) | 0.0033 (4) | 0.0077 (4) | 0.0034 (4) |
| N3 | 0.0178 (6) | 0.0167 (5) | 0.0110 (5) | 0.0015 (4) | 0.0058 (4) | 0.0033 (4) |
| C4 | 0.0160 (6) | 0.0179 (6) | 0.0106 (6) | 0.0041 (5) | 0.0046 (5) | 0.0037 (5) |
| C5 | 0.0155 (6) | 0.0141 (6) | 0.0124 (6) | 0.0023 (5) | 0.0040 (5) | 0.0018 (5) |
| C6 | 0.0105 (6) | 0.0124 (6) | 0.0141 (6) | 0.0032 (5) | 0.0038 (5) | 0.0034 (5) |
| C7 | 0.0280 (8) | 0.0315 (8) | 0.0170 (7) | −0.0022 (6) | 0.0117 (6) | 0.0051 (6) |
| C8 | 0.0223 (7) | 0.0173 (6) | 0.0167 (7) | 0.0042 (5) | 0.0067 (6) | 0.0044 (5) |
| N4 | 0.0226 (6) | 0.0150 (5) | 0.0125 (6) | −0.0014 (5) | 0.0075 (5) | 0.0026 (4) |
| N5 | 0.0357 (8) | 0.0210 (7) | 0.0259 (7) | 0.0004 (6) | 0.0043 (6) | 0.0005 (5) |
| O1 | 0.0151 (5) | 0.0149 (4) | 0.0189 (5) | 0.0013 (4) | 0.0091 (4) | 0.0051 (4) |
| O2 | 0.0147 (5) | 0.0246 (5) | 0.0205 (5) | 0.0017 (4) | 0.0069 (4) | 0.0091 (4) |
| O3 | 0.0318 (6) | 0.0194 (5) | 0.0113 (5) | −0.0003 (4) | 0.0077 (4) | 0.0014 (4) |
| C11 | 0.0146 (6) | 0.0153 (6) | 0.0132 (6) | 0.0028 (5) | 0.0047 (5) | 0.0062 (5) |
| C12 | 0.0161 (6) | 0.0194 (6) | 0.0163 (6) | 0.0053 (5) | 0.0076 (5) | 0.0075 (5) |
| C13 | 0.0175 (7) | 0.0187 (7) | 0.0176 (7) | 0.0058 (5) | 0.0061 (5) | 0.0045 (5) |
| C14 | 0.0140 (6) | 0.0166 (6) | 0.0182 (7) | 0.0012 (5) | 0.0032 (5) | 0.0071 (5) |
| C15 | 0.0171 (7) | 0.0212 (7) | 0.0179 (7) | 0.0027 (5) | 0.0083 (5) | 0.0084 (5) |
| C16 | 0.0173 (7) | 0.0199 (7) | 0.0129 (6) | 0.0040 (5) | 0.0063 (5) | 0.0051 (5) |
| N6 | 0.0199 (6) | 0.0184 (6) | 0.0158 (6) | 0.0022 (5) | 0.0054 (5) | 0.0049 (5) |
| O4 | 0.0222 (5) | 0.0175 (5) | 0.0161 (5) | −0.0018 (4) | 0.0036 (4) | 0.0044 (4) |
| C17 | 0.0203 (7) | 0.0134 (6) | 0.0174 (7) | −0.0009 (5) | 0.0071 (5) | 0.0016 (5) |
| C18 | 0.0204 (8) | 0.0526 (11) | 0.0288 (9) | 0.0110 (8) | 0.0106 (7) | 0.0167 (8) |
| C19 | 0.0315 (9) | 0.0315 (8) | 0.0177 (7) | 0.0026 (7) | 0.0059 (6) | 0.0101 (6) |
Geometric parameters (Å, º)
| S1—C4 | 1.7392 (14) | C15—C16 | 1.389 (2) |
| S1—C7 | 1.8036 (16) | N6—C17 | 1.320 (2) |
| S2—O3 | 1.4292 (11) | N6—C19 | 1.4551 (19) |
| S2—O2 | 1.4305 (11) | N6—C18 | 1.455 (2) |
| S2—N2 | 1.6707 (13) | O4—C17 | 1.2373 (18) |
| S2—C11 | 1.7580 (14) | N2—H01 | 0.80 (2) |
| Br1—C14 | 1.8920 (14) | C7—H7A | 0.9800 |
| N1—C2 | 1.3801 (16) | C7—H7B | 0.9800 |
| N1—N2 | 1.3979 (15) | C7—H7C | 0.9800 |
| N1—C6 | 1.4150 (17) | N4—H02 | 0.86 (2) |
| C2—N4 | 1.3167 (18) | N4—H03 | 0.85 (2) |
| C2—N3 | 1.3361 (17) | C12—H12 | 0.9500 |
| N3—C4 | 1.3342 (18) | C13—H13 | 0.9500 |
| C4—C5 | 1.3971 (19) | C15—H15 | 0.9500 |
| C5—C6 | 1.4235 (18) | C16—H16 | 0.9500 |
| C5—C8 | 1.4235 (19) | C17—H17 | 0.9500 |
| C6—O1 | 1.2281 (16) | C18—H18A | 0.9800 |
| C8—N5 | 1.147 (2) | C18—H18B | 0.9800 |
| C11—C12 | 1.392 (2) | C18—H18C | 0.9800 |
| C11—C16 | 1.3918 (19) | C19—H19A | 0.9800 |
| C12—C13 | 1.387 (2) | C19—H19B | 0.9800 |
| C13—C14 | 1.391 (2) | C19—H19C | 0.9800 |
| C14—C15 | 1.388 (2) | ||
| C4—S1—C7 | 101.66 (7) | C17—N6—C18 | 119.55 (13) |
| O3—S2—O2 | 121.50 (7) | C19—N6—C18 | 118.46 (13) |
| O3—S2—N2 | 103.18 (6) | O4—C17—N6 | 124.64 (14) |
| O2—S2—N2 | 106.00 (6) | N1—N2—H01 | 111.8 (14) |
| O3—S2—C11 | 107.29 (6) | S2—N2—H01 | 113.5 (14) |
| O2—S2—C11 | 109.08 (7) | S1—C7—H7A | 109.5 |
| N2—S2—C11 | 109.23 (6) | S1—C7—H7B | 109.5 |
| C2—N1—N2 | 116.88 (11) | H7A—C7—H7B | 109.5 |
| C2—N1—C6 | 122.54 (11) | S1—C7—H7C | 109.5 |
| N2—N1—C6 | 120.02 (11) | H7A—C7—H7C | 109.5 |
| N4—C2—N3 | 118.74 (12) | H7B—C7—H7C | 109.5 |
| N4—C2—N1 | 119.66 (12) | C2—N4—H02 | 117.5 (13) |
| N3—C2—N1 | 121.60 (12) | C2—N4—H03 | 121.9 (14) |
| N1—N2—S2 | 117.24 (9) | H02—N4—H03 | 120.2 (19) |
| C4—N3—C2 | 117.70 (12) | C13—C12—H12 | 120.5 |
| N3—C4—C5 | 123.85 (13) | C11—C12—H12 | 120.5 |
| N3—C4—S1 | 117.37 (10) | C12—C13—H13 | 120.3 |
| C5—C4—S1 | 118.77 (11) | C14—C13—H13 | 120.3 |
| C4—C5—C6 | 119.61 (12) | C14—C15—H15 | 120.6 |
| C4—C5—C8 | 121.71 (13) | C16—C15—H15 | 120.6 |
| C6—C5—C8 | 118.67 (12) | C15—C16—H16 | 120.3 |
| O1—C6—N1 | 119.46 (12) | C11—C16—H16 | 120.3 |
| O1—C6—C5 | 126.95 (13) | O4—C17—H17 | 117.7 |
| N1—C6—C5 | 113.59 (11) | N6—C17—H17 | 117.7 |
| N5—C8—C5 | 177.93 (16) | N6—C18—H18A | 109.5 |
| C12—C11—C16 | 121.64 (13) | N6—C18—H18B | 109.5 |
| C12—C11—S2 | 119.54 (10) | H18A—C18—H18B | 109.5 |
| C16—C11—S2 | 118.82 (11) | N6—C18—H18C | 109.5 |
| C13—C12—C11 | 118.95 (13) | H18A—C18—H18C | 109.5 |
| C12—C13—C14 | 119.35 (13) | H18B—C18—H18C | 109.5 |
| C15—C14—C13 | 121.82 (13) | N6—C19—H19A | 109.5 |
| C15—C14—Br1 | 119.39 (11) | N6—C19—H19B | 109.5 |
| C13—C14—Br1 | 118.79 (11) | H19A—C19—H19B | 109.5 |
| C14—C15—C16 | 118.90 (13) | N6—C19—H19C | 109.5 |
| C15—C16—C11 | 119.35 (13) | H19A—C19—H19C | 109.5 |
| C17—N6—C19 | 121.65 (13) | H19B—C19—H19C | 109.5 |
| N2—N1—C2—N4 | 2.44 (19) | C4—C5—C6—O1 | 177.72 (13) |
| C6—N1—C2—N4 | −168.95 (13) | C8—C5—C6—O1 | −1.0 (2) |
| N2—N1—C2—N3 | −176.97 (12) | C4—C5—C6—N1 | −2.16 (18) |
| C6—N1—C2—N3 | 11.6 (2) | C8—C5—C6—N1 | 179.16 (12) |
| C2—N1—N2—S2 | 100.31 (12) | O3—S2—C11—C12 | 160.71 (11) |
| C6—N1—N2—S2 | −88.07 (13) | O2—S2—C11—C12 | 27.34 (13) |
| O3—S2—N2—N1 | −167.13 (9) | N2—S2—C11—C12 | −88.10 (12) |
| O2—S2—N2—N1 | −38.42 (11) | O3—S2—C11—C16 | −19.99 (13) |
| C11—S2—N2—N1 | 78.98 (11) | O2—S2—C11—C16 | −153.36 (11) |
| N4—C2—N3—C4 | 175.25 (13) | N2—S2—C11—C16 | 91.20 (12) |
| N1—C2—N3—C4 | −5.3 (2) | C16—C11—C12—C13 | 0.3 (2) |
| C2—N3—C4—C5 | −4.6 (2) | S2—C11—C12—C13 | 179.59 (11) |
| C2—N3—C4—S1 | 174.66 (10) | C11—C12—C13—C14 | 0.2 (2) |
| C7—S1—C4—N3 | −0.12 (13) | C12—C13—C14—C15 | −0.6 (2) |
| C7—S1—C4—C5 | 179.14 (12) | C12—C13—C14—Br1 | 179.51 (11) |
| N3—C4—C5—C6 | 8.4 (2) | C13—C14—C15—C16 | 0.4 (2) |
| S1—C4—C5—C6 | −170.82 (10) | Br1—C14—C15—C16 | −179.69 (11) |
| N3—C4—C5—C8 | −172.98 (14) | C14—C15—C16—C11 | 0.1 (2) |
| S1—C4—C5—C8 | 7.81 (19) | C12—C11—C16—C15 | −0.5 (2) |
| C2—N1—C6—O1 | 172.81 (12) | S2—C11—C16—C15 | −179.77 (11) |
| N2—N1—C6—O1 | 1.68 (19) | C19—N6—C17—O4 | 174.49 (15) |
| C2—N1—C6—C5 | −7.29 (18) | C18—N6—C17—O4 | 1.3 (2) |
| N2—N1—C6—C5 | −178.42 (11) |
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N2—H01···O1i | 0.80 (2) | 2.00 (2) | 2.7784 (15) | 165.5 (19) |
| N4—H02···O4ii | 0.86 (2) | 1.98 (2) | 2.8382 (16) | 177.9 (19) |
| N4—H03···O4 | 0.85 (2) | 2.07 (2) | 2.8005 (16) | 143.1 (18) |
| C12—H12···O2iii | 0.95 | 2.46 | 3.4096 (18) | 173 |
| C7—H7B···O3iv | 0.98 | 2.45 | 3.2848 (19) | 143 |
| C17—H17···Br1v | 0.95 | 3.05 | 3.6686 (15) | 124 |
Symmetry codes: (i) −x+2, −y+1, −z+1; (ii) −x+1, −y, −z+1; (iii) −x+1, −y+1, −z+1; (iv) x, y, z+1; (v) x, y−1, z.
References
- Agilent (2013). CrysAlis PRO. Agilent Technologies Ltd, Yarnton, England.
- Elgemeie, G. H., El-Ezbawy, S. R. & Sood, S. A. (2003). Synth. Commun. 33, 2095–2101.
- Elgemeie, G. H., Elghandour, A. H. & Abd Elaziz, G. W. (2007). Synth. Commun. 37, 2827–2834.
- Elgemeie, G. H., Elsayed, S. H. & Hassan, A. S. (2009). Synth. Commun. 39, 1781–1792.
- Elgemeie, G. H. & Mohamed, R. A. (2014). Heterocyclic Commun. 20, 257–269.
- Elgemeie, G. H., Salah, A. M., Mohamed, R. A. & Jones, P. G. (2015). Acta Cryst E71, 1319–1321. [DOI] [PMC free article] [PubMed]
- Elgemeie, G. H. & Sood, S. A. (2001). J. Chem. Res. (S), pp. 439–441.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S2056989015018903/lh5790sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015018903/lh5790Isup2.hkl
Supporting information file. DOI: 10.1107/S2056989015018903/lh5790Isup3.cml
CCDC reference: 1430044
Additional supporting information: crystallographic information; 3D view; checkCIF report


