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International Journal of Clinical and Experimental Pathology logoLink to International Journal of Clinical and Experimental Pathology
. 2015 Oct 1;8(10):12977–12994.

Association of the ARL15 rs6450176 SNP and serum lipid levels in the Jing and Han populations

Jia-Qi Sun 1, Rui-Xing Yin 1, Guang-Yuan Shi 1, Shao-Wen Shen 1, Xia Chen 1, Yuan Bin 1, Feng Huang 1, Wei Wang 1, Wei-Xiong Lin 2, Shang-Ling Pan 3
PMCID: PMC4680439  PMID: 26722494

Abstract

The association of ADP-ribosylation factor-like 15 (ARL15) rs6450176 single nucleotide polymorphism (SNP) and serum lipid profiles has never been studied in the Chinese population. The present study was undertaken to detect the association of ARL15 rs6450176 SNP and several environmental factors with serum lipid levels in the Jing and Han populations. Genotypes of the SNP were determined in 726 unrelated subjects of Jing nationality and 726 participants of Han nationality. The genotypic and allelic frequencies of the SNP in Jing but not in Han were different between males and females (P < 0.001 and P < 0.05; respectively). The G allele carriers in Han had lower serum total cholesterol (TC), low-density lipoprotein cholesterol (LDL-C) and apolipoprotein (Apo) B levels, and higher ApoA1/ApoB ratio than the G allele non-carriers (P < 0.05-0.01). The G allele carriers in Jing had lower serum TC, high-density lipoprotein cholesterol (HDL-C), ApoA1, ApoB levels and higher ApoA1/ApoB ratio than the G allele non-carriers (P < 0.05 for all). Subgroup analyses showed that the G allele carriers had lower TC and LDL-C levels in Han males; lower LDL-C and ApoB levels in Han females; lower ApoB levels and ApoA1/ApoB ratio in Jing males; and lower LDL-C levels in Jing females than the G allele non-carriers (P < 0.05-0.01). Multiple linear regression analysis showed that serum TC, LDL-C, ApoB levels and the ApoA1/ApoB ratio in Han; and TC, HDL-C and ApoA1 levels in Jing were correlated with the genotypes of the ARL15 rs6450176 SNP (P < 0.05-0.001). Serum lipid parameters were also associated with several environmental factors in both ethnic groups. These findings indicated that there may be a racial/ethnic- and/or sex-specific association of the ARL15 rs6450176 SNP and serum lipid levels.

Keywords: ADP-ribosylation factor-like 15 gene, single nucleotide polymorphism, rs6450176, serum lipid level

Introduction

Cardiovascular diseases (CVD) are the leading causes of morbidity and mortality worldwide. Over decades, it has prospective epidemiological evidences that the most attributable and heritable risk factor for coronary artery disease (CAD) is the unfavorable serum lipid profile such as elevated serum levels of total cholesterol (TC) [1], triglyceride (TG) [2], low-density lipoprotein cholesterol (LDL-C) [3], and apolipoprotein (Apo) B [4], together with decreased levels of ApoA1 [4] and high-density lipoprotein cholesterol (HDL-C) [5]. Dyslipidemia is believed to be caused by various genetic and environmental factors [6], and their interactions [7]. Through family history and twin studies, it is known that almost 40%-70% of the interindividual variation in plasma lipid phenotypes can be explained by genetic polymorphisms [8,9].

More than 95 loci associated with serum lipid levels had been identified by genome-wide association (GWA) studies in recent years [10]. It is noticeable that a growing number of new loci involving in lipid metabolism have been identified through GWA studies. ADP-ribosylation factor-like 15 (ARL15) (http://www.ncbi.nlm.nih.gov/gene), a gene located on chromosome 5P15.2, is a member of ADP-ribosylation factor (ARF) subfamily. ARL has 40%-60% homologous sequences with the members of ARF which is a small G protein of Ras superfamily. ARL exists widely in eukaryotes and plays a substantial role in intracellular vesicle trafficking and signal transduction [11]. In 2009, Richards et al used GWA study to identify a single nucleotide polymorphism (SNP) located in the ARL15, rs4311394, which was associated with low adiponectin levels and type 2 diabetes (T2DM) in a European population [12]. Low plasma adiponectin levels have been associated with adiponectin-related diseases, such as T2DM, obesity, dyslipidemia, insulin resistance and CVD [11]. However, the effect of this rs6450176 SNP on serum lipid levels was not functionally validated and the mechanism was yet unclear. Furthermore, the reproducibility of this association has not been detected in the Chinese population so far.

China is a multiethnic country of 56 ethnic groups. Han is the largest ethnic group and Jing is the least populated minorities in south China among the 55 minority groups according to the population size of 28199 in 2010 (the sixth national census statistics of China). Most of them live in the so called “Three Islands of Jing Nationality”, Dongxing City, Guangxi Zhuang Autonomous Region, People’s Republic of China. The history of this minority can be traced back to the 1600s. Jing is the only Chinese minority for coastal fisheries, meanwhile is the only sea people in China. In this case, it has a lot of differences between Jing and Han (as well as the other landlocked nationalities) nationality in diet custom and culture characteristics. In previous studies, Lin et al. suggested that Jing ethnic population has an origin of Southeast Asia and is belonged to the southern group of Chinese populations [13]. To our knowledge, however, the association of ARL15 SNPs and serum lipid levels has not been previously reported in this population. Therefore, the aim of the present study was to explore the association of ARL15 rs6450176 SNP and several environmental factors with serum lipid profiles in the Jing and Han populations.

Materials and methods

Study population

A total of 726 unrelated subjects of Jing nationality comprising 376 males (51.79%) and 350 females (48.21%) and 726 unrelated participants of Han nationality including 374 men (51.52%) and 352 women (48.48%) were randomly selected from our previous stratified randomized samples. All of them were rural agricultural and/or fishery workers residing in Jiangping Down, Dongxing City, Guangxi Zhuang Autonomous Region, People’s Republic of China. The age range was from 15 to 80 years. The mean age of Jing participants was 57.87±13.33 years, whereas that of Han subjects was 58.29±13.14 years. All participants were essentially healthy and had no evidence of diseases related to atherosclerosis, CAD and diabetes. Any participant had a history of taking medications known to affect serum lipid levels (lipid-lowering drugs such as statins or fibrates, beta blockers, diuretics, or hormones) was excluded before the blood sample was taken. The study design was approved by the Ethics Committee of the First Affiliated Hospital, Guangxi Medical University. Informed consent was obtained from all participants.

Epidemiological survey

The survey was carried out using internationally standardized methods, following a common protocol [14]. Information on demographics, socioeconomic status, and lifestyle factors was collected with standardized questionnaires. The intake of alcohol was quantified as the number of liang (about 50 g) of rice wine, corn wine, rum, beer, or liquor consumed during the preceding 12 months. Alcohol consumption was categorized into groups of grams of alcohol per day: < 25 and ≥ 25. Smoking status was categorized into groups of cigarettes per day: < 20 and ≥ 20. In the physical examination, several parameters such as height, weight, and waist circumference were measured. Sitting blood pressure was measured three times with the use of a mercury sphygmomanometer after a 5-minute rest, and the average of the three measurements was recorded. Systolic blood pressure was determined by the first Korotkoff sound, and diastolic blood pressure by the fifth Korotkoff sound. Body weight, to the nearest 50 grams, was measured using a portable balance scale. Subjects were weighed in a minimum of clothing with shoes off. Height was measured, to the nearest 0.5 cm, using a stadiometer. From these two measurements body mass index (BMI, kg/m2) was calculated.

Biochemical measurements

A venous blood sample of 5 mL was obtained from all subjects after at least 12 hours of fasting. A two fifth of the sample (2 mL) was collected into glass tubes and used to determine serum lipid levels. The remaining three fifth of the sample (3 mL) was transferred to the tubes contained anticoagulants (4.80 g/L citric acid, 14.70 g/L glucose, and 13.20 g/L tri-sodium citrate) and was used to extract deoxyribonucleic acid (DNA). Measurements of serum TC, TG, HDL-C, and LDL-C levels in the samples were performed by enzymatic methods with commercially available kits (RANDOX Laboratories Ltd., Ardmore, Diamond Road, CrumlinCo. Antrim, United Kingdom, BT29 4QY; Daiichi Pure Chemicals Co., Ltd., Tokyo, Japan). Serum ApoA1 and ApoB levels were detected by the immunoturbidimetric immunoassay using a commercial kit (RANDOX Laboratories Ltd.). All determinations were performed with an autoanalyzer (Type 7170A; Hitachi Ltd., Tokyo, Japan) in the Clinical Science Experiment Center of the First Affiliated Hospital, Guangxi Medical University [15-17].

DNA amplification and genotyping

Genomic DNA was isolated from peripheral blood leukocytes using the phenol-chloroform method [15-17]. The extracted DNA was stored at 4°C until analysis. Genotyping of the ARL15 rs6450176 SNP was performed by polymerase chain reaction and restriction fragment length polymorphism (PCR-RFLP). PCR amplification was performed using 5’-TCGTGTTGGCCCATTTTAGG-3’ and 5’-CCCTTATGACACCTCCCCAA-3’ (Sangon, Shanghai, People’s Republic of China) as the forward and reverse primer pairs; respectively. Each amplification reaction was performed in a total volume of 25 μL, containing 10 × PCR buffer (1.8 mM MgCl2) 2.5 μL, 1 U Taq polymerase, 2.5 mmol/L of each dNTP (Tiangen, Beijing, People’s Republic of China) 2.0 μL, 20 pmol/L of each primer and 50 ng of genomic DNA, processing started with 95°C for 7 min and followed by 50 s of denaturing at 95°C, 45 s of annealing at 60°C and 1 min of elongation at 72°C for 33 cycles. The amplification was completed by a final extension at 72°C for 7 min. Then 10 U of Awl261 enzyme was added directly to the PCR products (10 μL) and digested at 37°C overnight. After restriction enzyme digestion of the amplified DNA, genotypes were identified by electrophoresis on 2% ethidium-bromide stained agarose gels and visualizing with ultraviolet illumination. Genotypes were scored by an experienced reader blinded to the epidemiological and lipid results. Six samples (AA, AG and GG genotypes in two; respectively) detected by the PCR-RFLP were also confirmed by direct sequencing. The PCR product was purified by low melting point gel electrophoresis and phenol extraction, and then the DNA sequences were analyzed in Shanghai Sangon Biological Engineering Technology & Services Co., Ltd., People’s Republic of China.

Diagnostic criteria

The normal values of serum TC, TG, HDL-C, LDL-C, ApoA1 and ApoB levels, and the ratio of ApoA1 to ApoB in our Clinical Science Experiment Center were 3.10-5.17, 0.56-1.70, 1.16-1.42, 2.70-3.10 mmol/L, 1.20-1.60, 0.80-1.05 g/L, and 1.00-2.50; respectively. The individuals with TC > 5.17 mmol/L and/or TG > 1.70 mmol/L were defined as hyperlipidemic [18]. Hypertension was diagnosed according to the criteria of 1999 World Health Organization-International Society of Hypertension Guidelines for the management of hypertension [19,20]. The diagnostic criteria of overweight and obesity were according to the Cooperative Meta-analysis Group of China Obesity Task Force. Normal weight, overweight and obesity were defined as a BMI < 24, 24-28, and > 28 kg/m2; respectively [21].

Statistical analyses

Epidemiological data were recorded on a pre-designed form and managed with Excel software. Data analysis was performed using the software SPSS version 16.0 (SPSS Inc., Chicago, Illinois). Quantitative variables were expressed as mean ± standard deviation (serum TG levels were presented as medians and interquartile ranges). Qualitative variables were expressed as percentages. Allele frequency was determined via direct counting, and the standard goodness-of-fit test was used to test the Hardy-Weinberg equilibrium. Difference in genotype distribution between the groups was obtained using the chi-square test. The difference in general characteristics between Jing and Han was tested by the Student’s unpaired t-test. The association of genotypes and serum lipid parameters was tested by analysis of covariance (ANCOVA). Sex, age, BMI, blood pressure, alcohol consumption, cigarette smoking were adjusted for the statistical analysis. Multivariate linear regression analysis with stepwise modeling was performed to evaluate the association of serum lipid levels with genotypes (AA = 1, AG = 2 and GG = 3) and several environment factors in the combined population of Jing and Han, Jing, Han, males and females; respectively. A P value of less than 0.05 was considered statistically significant.

Results

General characteristics and serum lipid levels

The general characteristics and serum lipid levels between the Han and Jing populations are summarized in Table 1. The percentages of smoking and alcohol consumption, LDL-C, ApoA1 and ApoB levels were higher in Han than in Jing (P < 0.05-0.001), whereas the levels of height, body weight, BMI, waist circumference, blood glucose, TC, TG were lower in Han than in Jing (P < 0.05-0.001). There were no significant differences in the gender ratio, age structure, systolic blood pressure, diastolic blood pressure, pulse pressure, serum HDL-C levels and the ApoA1/ApoB ratio between the two ethnic groups (P > 0.05 for all).

Table 1.

The general characteristics and serum lipid levels between Jing and Han Chinese

Parameter Han Jing t (x2) P
Number 726 726
Male/female 374/352 376/350 0.011 0.958
Age (year) 58.29±13.14 57.87±13.33 -0.609 0.543
Height (cm) 157.27±8.26 158.30±7.92 -2.431 0.015
Weight (kg) 56.93±9.69 58.94±9.93 -3.903 0.000
Body mass index (kg/m2) 22.98±3.30 23.45±3.13 -3.789 0.005
Waist circumference (cm) 78.25±9.10 80.33±9.09 -4.347 0.000
Cigarette smoking [n (%)]
    Non-smoker 576 (79.34) 642 (88.43)
    < 20 cigarettes/day 36 (4.96) 18 (2.48)
    ≥ 20 cigarettes/day 114 (15.70) 66 (9.09) 22.376 0.000
Alcohol consumption [n (%)]
    Non-drinker 560 (77.13) 619 (85.26)
    ≥ 25 g/day 112 (15.43) 87 (11.98)
    ≤ 25 g/day 54 (7.44) 20 (2.75) 21.715 0.000
Systolic BP (mmHg) 134.47±55.96 131.95±21.96 1.128 0.259
Diastolic BP (mmHg) 81.37±10.60 80.36±10.53 1.831 0.067
Pulse pressure (mmHg) 53.02±54.24 51.45±17.83 0.742 0.458
Glucose (mmol/L) 6.59±1.05 6.89±1.67 -4.118 0.000
Total cholesterol (mmol/L) 4.94±0.75 5.06±0.90 -2.696 0.007
Triglyceride (mmol/L) 1.56 (0.90) 1.69 (0.90) -2.673 0.008
HDL-C (mmol/L) 1.81±0.56 1.77±0.45 1.753 0.080
LDL-C (mmol/L) 2.92±0.40 2.81±0.42 5.021 0.000
Apolipoprotein (Apo) A1 (g/L) 1.34±0.20 1.28±0.22 5.372 0.000
ApoB (g/L) 1.07±0.24 1.04±0.23 2.698 0.007
ApoA1/ApoB 1.31±0.36 1.29±3.38 0.919 0.358

HDL-C: high-density lipoprotein cholesterol; LDL-C: low-density lipoprotein cholesterol. The value of triglyceride was presented as median (interquartile range), the difference between the two ethnic groups was determined by the Wilcoxon-Mann-Whitney test.

Results of electrophoresis and genotyping

After the genomic DNA of the samples were amplified by 2% agarose gel electrophoresis, the products of 521 bp nucleotide sequences were found in all samples (Figure 1). The genotypes identified were named according to the presence (G allele) or absence (A allele) of the enzyme restriction sites. Thus GG genotype was homozygote for the presence of the sites (bands at 287- and 234-bp). AG genotype was heterozygote for the presence and absence of the site (bands at 521-, 287- and 234-bp), and AA genotype was homozygote for the absence of the site (bands at 521-bp; Figure 2). The genotypes of the rs6450176 SNP were followed by the Hardy-Weinberg equilibrium.

Figure 1.

Figure 1

Electrophoresis of PCR products of the ARL15 rs6450176 SNP. Lane M, 100 bp marker ladder; lanes 1-6, PCR products (521 bp).

Figure 2.

Figure 2

Genotyping of the ARL15 rs6450176 SNP. Lane M, 100 bp marker ladder; lanes 1 and 2, AG genotype (521-, 287-, and 234-bp); lanes 3 and 4, AA genotype (521-bp); lanes 5 and 6, GG genotype (287- and 234-bp).

Genotypic and allelic frequencies

The genotypic and allelic frequencies of ARL15 rs6450176 SNP are shown in Table 2. The frequencies of A and G alleles were 59.37% and 40.08% in Han, and 59.78% and 40.22% in Jing (P > 0.05), respectively. The genotypic and allelic frequencies of the SNP in Jing but not in Han were different between males and females (P < 0.001 and P < 0.05; respectively). There were no differences in the genotypic frequencies of the ARL15 rs6450176 SNP between Han and Jing, or between Han males and Han females.

Table 2.

Comparison of the genotype and allele frequencies of ARL15 rs6450176 SNP in the Han and Jing populations [n (%)]

Group n Genotype Allele

AA AG GG A G
Han 726 275 (37.88) 302 (41.60) 139 (19.15) 862 (59.37) 582 (40.08)
Jing 726 300 (41.32) 308 (42.42) 138 (19.01) 868 (59.78) 584 (40.22)
Χ2 0.534 0.002
P 0.766 0.963
Han
    Male 374 150 (40.11) 150 (40.11) 74 (19.79) 450 (60.16) 290 (39.84)
    Female 352 125 (35.51) 162 (46.02) 65 (18.47) 412 (58.52) 292 (41.48)
    Χ2 2.653 0.785
    P 0.265 0.376
Jing
    Male 376 186 (44.15) 140 (37.23) 70 (18.62) 472 (62.77) 280 (37.23)
    Female 350 114 (32.57) 168 (48.00) 68 (19.43) 396 (56.57) 304 (43.43)
    Χ2 17.083 5.786
    P 0.000 0.016

Results of sequencing

The results were shown as AA, AG and GG genotypes by PCR-RFLP, the AA, AG and GG genotypes were also confirmed by direct sequencing (Figure 3); respectively.

Figure 3.

Figure 3

A part of the nucleotide sequence of the ARL15 rs6450176 SNP. AA: AA genotype; AG: AG genotype; and GG: GG genotype.

Genotypes and serum lipid levels

As shown in Table 3, serum TC, LDL-C, ApoB levels and the ApoA1/ApoB ratio in Han were different among the genotypes (P < 0.05-0.001). The G allele carriers had lower serum TC, LDL-C and ApoB levels, and higher ApoA1/ApoB ratio than the G allele non-carriers. Serum TC, HDL-C, ApoA1, ApoB levels and the ApoA1/ApoB ratio were different among the genotypes in Jing (P < 0.05 for all). The G allele carriers had lower serum TC, HDL-C, ApoA1, ApoB levels and higher ApoA1/ApoB ratio than the G allele non-carriers. Subgroup analyses showed that serum TC and LDL-C levels in Han males and LDL-C and ApoB levels in Han females were different among the genotypes (P < 0.05-0.01). The G allele carrier had lower serum TC, LDL-C and ApoB levels than the G allele non-carriers in Han males and females. In contrast, serum ApoB levels and ApoA1/ApoB ratio in Jing males and LDL-C levels in Jing females were different among the genotypes (P < 0.05-0.01). The G allele carriers had lower serum LDL-C and ApoB levels, and the ApoA1/ApoB ratio than the G allele non-carriers in Jing males and females (Table 4).

Table 3.

Comparison of the genotypes and serum lipid levels in the Han and Jing populations

Genotype N TC (mmol/L) TG (mmol/L) HDL-C (mmol/L) LDL-C (mmol/L) ApoA1 (g/L) ApoB (g/L) ApoA1/ApoB
Han
    AA 275 5.10±0.64 1.27 (0.62) 1.86±0.48 3.01±0.36 1.35±0.22 1.12±0.23 1.26±0.34
    AG 302 4.86±0.79 1.38 (0.67) 1.80±0.52 2.88±0.43 1.34±0.18 1.06±0.24 1.34±0.36
    GG 139 4.81±0.80 1.38 (0.81) 1.75±0.73 2.86±0.42 1.31±0.19 1.05±0.25 1.33±0.38
    F 11.787 2.607 1.596 10.841 1.883 6.141 4.288
    P 0.000 0.272 0.203 0.000 0.153 0.002 0.014
Jing
    AA 300 5.14±0.89 1.40 (0.59) 1.82±0.49 2.84±0.39 1.31±0.26 1.04±0.21 1.30±0.35
    AG 308 5.08±0.92 1.44 (0.78) 1.76±0.42 2.82±0.45 1.27±0.20 1.06±0.24 1.27±0.35
    GG 138 4.87±0.95 1.44 (0.74) 1.78±0.45 2.73±0.50 1.27±0.19 0.99±0.24 1.37±0.45
    F 3.499 1.105 3.150 1.733 3.580 4.039 4.052
    P 0.031 0.332 0.043 0.178 0.028 0.018 0.018

TC: total cholesterol; TG: triglyceride; HDL-C: high-density lipoprotein cholesterol; LDL-C: low-density lipoprotein; ApoA1: apolipoprotein A1; ApoB: apolipoprotein B; ApoA1/ApoB: the ratio of apolipoprotein A1 to apolipoprotein B. The value of triglyceride was presented as median (interquartile range), the difference among the genotypes was determined by the Kruskal-Wallis test.

Table 4.

Comparison of the genotypes and serum lipid levels between males and females in the Han and Jing populations

Ethnic/Genotype N TC (mmol/L) TG (mmol/L) HDL-C (mmol/L) LDL-C (mmol/L) ApoA1 (g/L) ApoB (g/L) ApoA1/ApoB
Han/male
    AA 150 5.07±0.67 1.24 (0.53) 1.79±0.54 2.97±0.35 1.32±0.22 1.09±0.22 1.27±0.37
    AG 150 4.81±0.67 1.27 (0.77) 1.75±0.58 2.91±0.38 1.36±0.20 1.07±0.22 1.32±0.31
    GG 74 4.600 1.39 (0.88) 1.59±0.67 2.73±0.39 1.31±0.19 1.04±0.25 1.35±0.41
    F 6.075 0.147 1.605 5.419 1.132 0.927 0.985
    P 0.003 0.863 0.204 0.005 0.325 0.398 0.375
Han/female
    AA 125 5.14±0.60 1.29 (0.65) 1.95±0.40 3.03±0.36 1.36±0.21 1.12±0.23 1.26±0.32
    AG 162 4.90±0.88 1.41 (0.61) 1.84±0.47 2.86±0.45 1.33±0.18 1.05±0.26 1.34±0.38
    GG 65 5.05±0.82 1.31 (0.78) 1.93±0.75 2.94±0.42 1.31±0.20 1.05±0.25 1.32±0.36
    F 2.402 1.376 2.030 4.605 1.873 3.201 1.518
    P 0.092 0.254 0.133 0.011 0.155 0.042 0.221
Jing/male
    AA 186 5.04±0.85 1.33 (0.68) 1.76±0.53 2.78±0.36 1.29±0.23 1.03±0.22 1.32±0.41
    AG 140 5.12±0.82 1.59 (0.94) 1.65±0.36 2.84±0.39 1.23±0.20 1.11±0.22 1.15±0.29
    GG 70 4.94±0.84 1.81 (1.00) 1.75±0.47 2.80±0.39 1.24±0.19 1.01±0.21 1.31±0.44
    F 0.847 0.290 1.092 0.432 1.924 5.092 3.675
    P 0.430 0.748 0.338 0.650 0.149 0.007 0.027
Jing/female
    AA 114 5.22±0.91 1.45 (0.50) 1.87±0.44 2.87±0.40 1.32±0.29 1.05±0.21 1.29±0.31
    AG 168 5.06±0.97 1.40 (0.74) 1.80±0.43 2.87±0.47 1.29±0.20 1.03±0.25 1.32±0.37
    GG 68 4.83±1.01 1.37 (0.58) 1.79±0.44 2.67±0.55 1.28±0.19 0.98±0.26 1.40±0.45
    F 2.963 0.130 1.292 3.246 0.887 2.208 1.959
    P 0.053 0.878 0.276 0.040 0.413 0.111 0.143

TC: total cholesterol; TG: triglyceride; HDL-C: high-density lipoprotein cholesterol; LDL-C: low-density lipoprotein cholesterol; ApoA1: apolipoprotein A1; ApoB: apolipoprotein B; ApoA1/ApoB: the ratio of apolipoprotein A1 to apolipoprotein B. The values of TG were presented as median (interquartile range), the difference among the genotypes was determined by the Kruskal-Wallis test.

Relative factors for serum lipid parameters

Multiple linear regression analysis showed that serum TC, HDL-C, LDL-C, ApoA1 and ApoB levels in the combined population of Han and Jing; TC, LDL-C, ApoB levels and the ApoA1/ApoB ratio in Han; and TC, HDL-C and ApoA1 levels in Jing were correlated with the genotypes of the ARL15 rs6450176 SNP (P < 0.05-0.001; Table 5). When the correlation of serum lipid parameters and the genotypes was analyzed according to sex, we showed that serum TC, HDL-C and LDL-C levels in Han males; ApoB levels in Han females; ApoA1 levels in Jing males; and TC and LDL-C levels in Jing females were correlated with the genotypes (P < 0.05-0.001; Table 6).

Table 5.

Relationship between serum lipid parameters and relative factors in the Han and Jing populations

Lipid Risk factor B Std.error Beta t P
Han and Jing
    TC Age 0.007 0.002 0.114 4.328 0.000
Genotype -0.129 0.029 -0.114 -4.444 0.000
Height -0.010 0.003 -0.102 -3.762 0.000
Waist circumference 0.007 0.002 0.074 2.760 0.006
Glucose 0.134 0.015 0.227 8.855 0.000
Ethnic group 0.111 0.043 0.067 2.586 0.010
    TG Waist circumference 0.041 0.004 0.419 9.438 0.000
Diastolic blood pressure 0.008 0.002 0.098 3.828 0.000
Glucose 0.122 0.017 0.189 7.314 0.000
Weight -0.018 0.004 -0.197 -4.369 0.000
Alcohol consumption 0.152 0.043 0.090 3.517 0.000
Age -0.006 0.002 -0.082 -3.199 0.001
Ethnic group 0.094 0.045 0.052 2.077 0.038
    HDL-C Waist circumference -0.016 0.001 -0.289 -11.244 0.000
Gender 0.256 0.037 0.252 6.966 0.000
Alcohol consumption 0.143 0.027 0.149 5.341 0.000
Cigarette smoking -0.044 0.013 -0.089 -3.433 0.001
Height 0.009 0.002 0.150 4.155 0.000
Genotype -0.049 0.017 -0.070 -2.817 0.005
Age 0.003 0.001 0.070 2.558 0.011
    LDL-C Ethnic group -0.112 0.022 -0.135 -5.197 0.000
Age 0.003 0.001 0.089 3.347 0.001
Glucose 0.037 0.008 0.125 4.813 0.000
Genotype -0.059 0.015 -0.103 -4.017 0.000
Diastolic blood pressure 0.002 0.001 0.058 2.176 0.030
Waist circumference 0.003 0.001 0.069 2.532 0.011
Height -0.003 0.001 -0.061 -2.248 0.025
    ApoA1 Waist circumference -0.004 0.001 -0.177 -6.872 0.000
Glucose -0.010 0.004 -0.069 -2.620 0.009
Alcohol consumption 0.074 0.011 0.184 6.428 0.000
Ethnic group -0.043 0.011 -0.101 -3.907 0.000
Gender 0.042 0.012 0.099 3.546 0.000
Genotype -0.022 0.007 -0.075 -2.942 0.003
Cigarette smoking -0.013 0.005 -0.063 -2.365 0.018
Systolic blood pressure 0.000 0.000 0.059 2.337 0.020
    ApoB Waist circumference 0.006 0.001 0.230 9.002 0.000
Glucose 0.012 0.004 0.074 2.839 0.005
Ethnic group -0.047 0.012 -0.100 -3.912 0.000
Age 0.002 0.000 0.095 3.728 0.000
Genotype -0.023 0.008 -0.073 -2.883 0.004
    ApoA1/ApoB Waist circumference -0.009 0.002 -0.218 -4.907 0.000
Glucose -0.029 0.007 -0.110 -4.222 0.000
Age -0.003 0.001 -0.097 -3.779 0.000
Alcohol consumption 0.060 0.018 0.088 3.440 0.001
Weight -0.003 0.002 -0.093 -2.039 0.042
Han
    TC Genotype -0.169 0.037 -0.165 -4.617 0.000
Height -0.019 0.004 -0.215 -5.292 0.000
Glucose 0.197 0.027 0.263 7.218 0.000
Systolic blood pressure 0.001 0.000 0.110 3.071 0.002
Waist circumference 0.026 0.006 0.322 4.202 0.000
Body mass index -0.061 0.017 -0.269 -3.566 0.000
    TG Waist circumference 0.050 0.006 0.509 7.948 0.000
Cigarette smoking 0.201 0.045 0.166 4.471 0.000
Glucose 0.169 0.031 0.202 5.471 0.000
Weight -0.028 0.006 -0.300 -4.594 0.000
Diastolic blood pressure 0.011 0.003 0.125 3.492 0.001
Age -0.007 0.002 -0.103 -2.884 0.004
    HDL-C Waist circumference -0.017 0.002 -0.271 -7.327 0.000
Cigarette smoking -0.120 0.032 -0.159 -3.687 0.000
Diastolic blood pressure 0.004 0.002 0.083 2.310 0.021
Gender 0.244 0.056 0.219 4.336 0.000
Height 0.012 0.003 0.179 3.720 0.000
Alcohol consumption 0.098 0.040 0.105 2.462 0.014
    LDL-C Genotype -0.089 0.020 -0.163 -4.497 0.000
Glucose 0.088 0.015 0.219 5.940 0.000
Diastolic blood pressure 0.003 0.001 0.085 2.267 0.024
Height -0.005 0.002 -0.097 -2.675 0.008
Systolic blood pressure 0.001 0.000 0.077 2.054 0.040
    ApoA1 Body mass index -0.011 0.002 -0.184 -5.112 0.000
Alcohol consumption 0.067 0.013 0.203 5.006 0.000
Gender 0.047 0.016 0.119 2.920 0.004
    ApoB Waist circumference 0.010 0.002 0.390 6.213 0.000
Glucose 0.023 0.009 0.094 2.505 0.012
Genotype -0.039 0.012 -0.119 -3.323 0.001
Weight -0.005 0.002 -0.193 -3.081 0.002
    ApoA1/ApoB Waist circumference -0.013 0.001 -0.321 -8.964 0.000
Glucose -0.042 0.013 -0.116 -3.097 0.002
Genotype 0.046 0.017 0.095 2.699 0.007
Height 0.004 0.002 0.084 2.334 0.020
Jing
    TC Age 0.014 0.003 0.202 5.066 0.000
Cigarette smoking 0.188 0.054 0.123 3.456 0.001
Glucose 0.126 0.022 0.213 5.699 0.000
Body mass index 0.031 0.010 0.108 3.003 0.003
Pulse pressure -0.006 0.002 -0.115 -2.881 0.004
Alcohol consumption 0.232 0.075 0.115 3.111 0.002
Height -0.012 0.004 -0.104 -2.712 0.007
Genotype -0.105 0.044 -0.086 -2.406 0.016
    TG Waist circumference 0.027 0.004 0.272 7.390 0.000
Glucose 0.121 0.022 0.207 5.531 0.000
Diastolic blood pressure 0.007 0.003 0.079 2.134 0.033
    HDL-C Waist circumference -0.016 0.002 -0.324 -9.344 0.000
Alcohol consumption 0.226 0.037 0.221 6.038 0.000
Gender 0.137 0.034 0.151 4.095 0.000
Genotype -0.044 0.021 -0.071 -2.045 0.041
    LDL-C Age 0.004 0.001 0.130 3.519 0.000
Glucose 0.028 0.011 0.101 2.649 0.008
Body mass index 0.013 0.005 0.099 2.700 0.007
    ApoA1 Weight -0.004 0.001 -0.182 -4.955 0.000
Alcohol consumption 0.046 0.018 0.092 2.487 0.013
Genotype -0.027 0.011 -0.089 -2.435 0.015
    ApoB Waist circumference 0.003 0.002 0.125 2.053 0.040
Age 0.002 0.001 0.106 2.947 0.003
Body mass index 0.009 0.004 0.128 2.101 0.036
    ApoA1/ApoB Waist circumference -0.005 0.003 -0.124 -1.987 0.047
Age -0.004 0.001 -0.128 -3.490 0.001
Weight -0.007 0.002 -0.192 -3.039 0.002
Alcohol consumption 0.079 0.030 0.093 2.605 0.009

TC: total cholesterol; TG: triglyceride; HDL-C: high-density lipoprotein cholesterol; LDL-C: low-density lipoprotein cholesterol; ApoA1: apolipoprotein A1; ApoB: apolipoprotein B; ApoA1/ApoB: the ratio of apolipoprotein A1 to apolipoprotein B.

Table 6.

Relationship between serum lipid parameters and relative factors in the males and females of the Han and Jing populations

Lipid Risk factor B Std.error Beta t P
Han/male
    TC Genotype -0.247 0.047 -0.263 -5.315 0.000
Glucose 0.188 0.033 0.291 5.762 0.000
Systolic blood pressure 0.001 0.000 0.141 2.854 0.005
Waist circumference 0.008 0.004 0.097 1.968 0.050
    TG Waist circumference 0.058 0.011 0.521 5.333 0.000
Cigarette smoking 0.209 0.053 0.200 3.955 0.000
Glucose 0.160 0.039 0.214 4.137 0.000
Diastolic blood pressure 0.019 0.004 0.211 4.394 0.000
Body mass index -0.099 0.031 -0.306 -3.198 0.002
Age -0.011 0.004 -0.156 -2.871 0.004
Height -0.022 0.009 -0.132 -2.347 0.019
    HDL-C Waist circumference -0.020 0.004 -0.286 -5.527 0.000
Height 0.016 0.005 0.162 3.152 0.002
Cigarette smoking -0.120 0.035 -0.186 -3.429 0.001
Diastolic blood pressure 0.005 0.003 0.097 1.911 0.057
Alcohol consumption 0.099 0.044 0.122 2.256 0.025
Genotype -0.081 0.039 -0.103 -2.071 0.039
    LDL-C Genotype -0.115 0.025 -0.228 -4.529 0.000
Glucose 0.085 0.018 0.245 4.791 0.000
Waist circumference 0.005 0.002 0.117 2.321 0.021
    ApoA1 Waist circumference -0.007 0.001 -0.317 -6.524 0.000
Alcohol consumption 0.085 0.014 0.312 6.041 0.000
Cigarette smoking -0.024 0.011 -0.111 -2.146 0.033
    ApoB Waist circumference 0.006 0.001 0.238 4.707 0.000
Glucose 0.025 0.011 0.119 2.273 0.024
Diastolic blood pressure 0.002 0.001 0.107 2.120 0.035
    ApoA1/ApoB Waist circumference -0.016 0.002 -0.373 -7.726 0.000
Glucose -0.035 0.017 -0.107 -2.029 0.043
Alcohol consumption 0.056 0.024 0.113 2.347 0.019
Han/Female
    TC Height -0.016 0.006 -0.138 -2.611 0.009
Glucose 0.213 0.046 0.243 4.617 0.000
    TG Waist circumference 0.028 0.004 0.325 6.415 0.000
Glucose 0.184 0.050 0.194 3.659 0.000
    HDL-C Body mass index -0.039 0.007 -0.277 -5.395 0.000
    LDL-C Age 0.007 0.002 0.207 3.946 0.000
Glucose 0.093 0.025 0.196 3.692 0.000
    ApoA1 Body mass index -0.008 0.003 -0.147 -2.778 0.006
    ApoB Age 0.003 0.001 0.158 2.981 0.003
Waist circumference 0.013 0.003 0.480 4.498 0.000
Genotype -0.052 0.018 -0.149 -2.909 0.004
Weight -0.008 0.003 -0.309 -2.865 0.004
    ApoA1/ApoB Body mass index -0.024 0.005 -0.251 -4.923 0.000
Glucose -0.052 0.021 -0.130 -2.415 0.016
Age -0.005 0.001 -0.180 -3.528 0.000
Jing/male
    TC Cigarette smoking 0.225 0.068 0.164 3.326 0.001
Age 0.014 0.003 0.238 4.334 0.000
Glucose 0.076 0.027 0.147 2.766 0.006
Pulse pressure -0.010 0.003 -0.206 -3.745 0.000
Alcohol consumption 0.251 0.072 0.173 3.489 0.001
Body mass index 0.086 0.025 0.312 3.368 0.001
Waist circumference -0.017 0.008 -0.198 -2.153 0.032
    TG Waist circumference 0.037 0.005 0.359 7.091 0.000
Age -0.014 0.004 -0.201 -3.819 0.000
Glucose 0.151 0.031 0.251 4.841 0.000
Height -0.028 0.008 -0.189 -3.436 0.001
    HDL-C Waist circumference -0.024 0.004 -0.497 -5.633 0.000
Alcohol consumption 0.246 0.039 0.303 6.317 0.000
Body mass index 0.031 0.014 0.201 2.283 0.023
    LDL-C Body mass index 0.017 0.006 0.136 2.646 0.008
    ApoA1 Weight -0.004 0.001 -0.188 -3.759 0.000
Alcohol consumption 0.062 0.019 0.166 3.297 0.001
Genotype -0.036 0.014 -0.128 -2.536 0.012
    ApoB Body mass index 0.021 0.004 0.294 5.922 0.000
    ApoA1/ApoB Weight -0.014 0.002 -0.356 -7.184 0.000
Age -0.004 0.001 -0.152 -3.059 0.002
Alcohol consumption 0.080 0.032 0.120 2.478 0.014
Jing/female
    TC Age 0.018 0.004 0.233 4.509 0.000
Glucose 0.200 0.036 0.291 5.522 0.000
Genotype -0.183 0.070 -0.135 -2.603 0.010
    TG Waist circumference 0.025 0.005 0.276 5.239 0.000
Glucose 0.072 0.030 0.131 2.396 0.017
Height -0.025 0.007 -0.187 -3.561 0.000
    HDL-C Waist circumference -0.017 0.003 -0.316 -6.222 0.000
    LDL-C Age 0.008 0.002 0.205 3.937 0.000
Glucose 0.059 0.018 0.176 3.251 0.001
Genotype -0.086 0.034 -0.130 -2.490 0.013
    ApoA1 Body mass index -0.010 0.004 -0.146 -2.744 0.006
    ApoB Systolic blood pressure 0.002 0.001 0.150 2.804 0.005
Body mass index 0.010 0.004 0.138 2.590 0.010
    ApoA1/ApoB Body mass index -0.024 0.006 -0.214 -4.079 0.000

TC: total cholesterol; TG: triglyceride; HDL-C: high-density lipoprotein cholesterol; LDL-C: low-density lipoprotein cholesterol; ApoA1: apolipoprotein A1; ApoB: apolipoprotein B; ApoA1/ApoB: the ratio of apolipoprotein A1 to apolipoprotein B.

Serum lipid parameters were also associated with age, gender, BMI, systolic and diastolic blood pressure, pulse pressure, fasting blood glucose levels, cigarette smoking and alcohol consumption in both ethnic groups or in males and females (P < 0.05-0.001; Tables 5 and 6).

Discussion

In the present study, we showed that the levels of TC and TG were higher and LDL-C, ApoA1 and ApoB were lower in Jing than in Han. There were no significant differences in the levels of HDL-C and the ratio of ApoA1 to ApoB between the two ethnic groups. These differences in serum lipid profiles between the two ethnic groups may result from the combined action of genetic, environmental factors and their interactions [23]. Jing is the only Chinese minority for coastal fisheries, meanwhile is the only sea people in China. In this case, it has a very special lifestyle and dietary habits compared with the other landlocked nationalities. Their marriages were family-arranged in the old days when they sing antiphonal songs to look for the other half. After antiphonal singing, if the boy’s into the girl he would kick sand toward her while approaching her. If the girl feel the same she would kick back, which means engagement. While the formal engagement ceremony and wedding they need pork, cake, tea, wine, glutinous rice as gifts. Jing stays endogamy, intermarriage with Han or Zhuang people is seldom happened. Jing people don’t get married with someone sharing the same last name, also cross-cousin marriage is strictly forbidden. This kind of breeding with exclusive indicates that some hereditary characteristics and genotypes of lipid metabolism-related genes in this population may be different from those in Han people.

The frequency spectrum of ARL15 rs6450176 mutation varied significantly among different races/ethnicities. According to the Hap Map data, the minor allele G frequency of the SNP was 47.7% in Chinese, 54.1% in Japanese, 66.8% in Yoruba, 66.1% in Kenya, 66.1% in Mexican and 73.9% in European population, 73.3% in Italy. In the current study, we showed that the frequencies of AA, AG, GG genotypes were 37.88%, 41.60% and 19.15% in Han, and 41.32%, 42.42% and 19.01% in Jing (P > 0.05); respectively. The frequency of the ARL15 rs6450176G allele was 40.08% in Han, and 40.22% in Jing (P > 0.05), which was lower than that in the Beijing Chinese samples. This difference may result from different sample sizes and regions (Beijing vs. Guangxi). In the present study, however, we noted that the genotypic and allelic frequencies of the SNP in Jing but not in Han were different between males and females. The frequency of the ARL15 rs6450176G allele was higher in Jing females than in Jing males (43.43% vs. 37.23%, P < 0.05). These findings may also partly explain why the prevalence of CVD is lower in females than in males in some ethnic groups.

There were only a few previous studies presented the direct relationship between the ARL15 rs6450176 SNP and serum lipid levels in humans. The ARL15 rs6450176 SNP was significant associated with HDL-C (P = 5 × 10-8) [22] and T2DM (P = 5.8 × 10-8) in European Populations [24]. In the present study, we showed that the G allele carriers in Han had lower serum TC, LDL-C and ApoB levels, and higher ApoA1/ApoB ratio than the G allele non-carriers. The G allele carriers in Jing had lower serum TC, HDL-C, ApoA1, ApoB levels and higher ApoA1/ApoB ratio than the G allele non-carriers. Subgroup analyses showed that the G allele carriers had lower serum TC and LDL-C levels in Han males and LDL-C and ApoB levels in Han females than the G allele non-carriers. In contrast, the G allele carriers had lower serum ApoB levels and ApoA1/ApoB ratio in Jing males and LDL-C levels in Jing females than the G allele non-carriers. These findings indicated that the association of ARL15 rs6450176 SNP and serum lipid levels may have racial/ethnic and/or sex specificity. As far as we know, our study is the first replication of GWA study signals about the association of ARL15 rs6450176 SNP with serum lipid levels in the Chinese population. Therefore, further studies with larger sample size are still needed to confirm this association.

It is well realized that environmental factors such as dietary patterns, lifestyle and physical inactivity are all strongly correlated with serum lipid levels [25]. In the present study, multivariate linear regression analysis also showed that age, sex, BMI, waist circumference, alcohol consumption, cigarette smoking, and blood pressure were involved in determining serum lipid parameters in both ethnic groups. These data suggest that the environmental factors also play an important role in determining serum lipid levels in our study populations. When talking about diet pattern, rice is Jing people’s staple food supplemented with corn, sweet potato, taro and other grains. They prefer glutinous rice and seafood like fish, shrimp, crabs, shellfish and sandworm. Also pigs, chickens and ducks are the main sources of meat. Jing people prefer sweet food such as sweet glutinous rice porridge, mung bean syrup, because they believe sweet food is a symbol for happiness. This preference of sugariness may be related to the higher glucose level in Jing than in Han people. A kind of fish sauce called nuoc-mam is also popular on Jing people’s dinner table, which contains 17 amino acids (8 essential amino acids included of course) [26]. Diet alone could be responsible for up to 2.5% of the variability on serum lipid levels [27]. A meta-analysis stated that diet modification is a key strategy for prevention and regression of CAD, and for every 1% decrease in energy consumed as dietary saturated fatty acid, TC decreased by 0.056 mmol/L and LDL-C by 0.05 mmol/L [28]. It is well accepted that some specific dietary patterns, say the Mediterranean diet, are strongly related with favorable blood lipid profiles, also with the prevalence of dyslipidemia [29]. Jing nationality, as the only Chinese minority for coastal fisheries, has a diet pattern which is very similar with the Mediterranean diet. High intake of sea fish and other seafood indicates low content of saturated fatty acids and high content of composite carbohydrates and dietary fiber [30].

In addition, we found that the percentages of smokers were higher in Han than in Jing nationalities (P < 0.001). Over the years, the relationship between cigarette smoking and dyslipidemia has been gotten in focus by more and more investigators. A recent study in smoking males (ages from 25 to 35 years old) has found that a significant increase in TC and LDL-C in tobacco users [31,32]. Also another recent meta-analysis also reported that smoking increased TG by 0.15 mmol/L, and decreased HDL-C by 0.09 mmol/L with every 20 cigarettes smoked [33]. In the present study, we also noticed that the percentages of alcohol consumption were higher in Han than in Jing nationalities (P < 0.001). Many studies showed that moderate alcohol intake has been associated with reduced cardiovascular events, which is also an important component of Mediterranean diet [30,34]. The beneficial effects of alcohol on CVD have been ascribed to the increase in HDL-C and ApoA1 levels [35]. However, alcohol can be addictive, and high intake of alcohol can be associated with serious problems health including hypertension, hypertriglyceridemia, and liver damage [36]. Like any other source of carbohydrates, alcohol can increase plasma TG levels and can serve as a source of excess calories [37]. It was reported that the alcohol intake of 60 g/day increases the TG levels by about 0.19 mg/dL per 1 gram of alcohol consumed [38]. Onat et al. [39] also showed that alcohol consumption was robustly positively associated with TG, LDL-C, and ApoB in men and negatively correlated with TG and/or not correlated with LDL-C and ApoB in women. Nevertheless, another research indicated that the effects of alcohol consumption on LDL-C appear to vary by specific patient types or patterns of alcohol intake, and sex as well as genetic variants [40]. Consequently, the joint effects of different dietary habits, lifestyles, and environmental factors probably further modify the association of genetic variations and serum lipid levels in our study populations.

There are several potential limitations in our study. First, we were not able to alleviate the effect of diet during the statistical analysis since the diet intake was self-reported and difficult to classify. Second, we only measured serum TC, TG, HDL-C, LDL-C, ApoA1, ApoB levels, and the ratio of ApoA1 to ApoB and detected their associations with the ARL15 rs6450176 SNP without comprehensive measurements of the subclasses lipoproteins such as HDL2, HDL3, small dense LDL, and large buoyant LDL. However, serum TC, HDL-C, and LDL-C are the most important indicators for dyslipidemia and are also the phenotypes of clinical routine testing. We believed that the ARL15 rs6450176 SNP associated with these lipid parameters may add predictive information for the development of dyslipidemia and CVD. Third, although we observe significant association of the ARL15 rs6450176 SNP and serum lipid levels, there are still many unmeasured environmental and genetic factors that needed to be considered. The interactions of gene-gene, gene-environment, and environment-environment on serum lipid levels are remained to be determined. Moreover, we recognized the limited power to provide a more significant advance in understanding the full impact of the ARL15 rs6450176 SNP on lipoprotein metabolism. The association of the rs6450176 SNP, ARL15 expression in adipose tissue and plasma lipid levels should be detected in further investigations.

In conclusion, this study showed that the associations of the ARL15 rs6450176 SNP and serum lipid levels were different between the Jing and Han populations and between males and females in the both ethnic groups. There may be a racial/ethnic- and/or sex-specific association of the ARL15 rs6450176 SNP and serum lipid levels.

Acknowledgements

This study was supported by the National Natural Science Foundation of China (No: 81160111).

Disclosure of conflict of interest

None.

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