Skip to main content
Proceedings of the National Academy of Sciences of the United States of America logoLink to Proceedings of the National Academy of Sciences of the United States of America
. 1993 Sep 1;90(17):7980–7984. doi: 10.1073/pnas.90.17.7980

Comparative linkage maps of the rice and maize genomes.

S Ahn 1, S D Tanksley 1
PMCID: PMC47271  PMID: 8103599

Abstract

Genetic linkage maps have been constructed for the rice and maize genomes on the basis of orthologous loci detected with a common set of cDNA clones. Conserved linkage groups could be identified, which together account for more than two-thirds of both genomes. In some instances, entire chromosomes or chromosome arms are nearly identical with respect to gene order and gene content. The results also reveal that most of the genes (> 72%) duplicated during ancient polyploidization are still present in the maize genome in duplicate copy. The comparative maps of rice and maize provide a basis for interpreting molecular, genetic, and breeding information between these two important species and establish a framework for ultimately connecting the genetics of all grass species.

Full text

PDF
7980

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Bonierbale M. W., Plaisted R. L., Tanksley S. D. RFLP Maps Based on a Common Set of Clones Reveal Modes of Chromosomal Evolution in Potato and Tomato. Genetics. 1988 Dec;120(4):1095–1103. doi: 10.1093/genetics/120.4.1095. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Burr B., Burr F. A. Recombinant inbreds for molecular mapping in maize: theoretical and practical considerations. Trends Genet. 1991 Feb;7(2):55–60. doi: 10.1016/0168-9525(91)90232-F. [DOI] [PubMed] [Google Scholar]
  3. Burr B., Burr F. A., Thompson K. H., Albertson M. C., Stuber C. W. Gene mapping with recombinant inbreds in maize. Genetics. 1988 Mar;118(3):519–526. doi: 10.1093/genetics/118.3.519. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Darling S. M., Abbott C. M. Mouse models of human single gene disorders. I: Nontransgenic mice. Bioessays. 1992 Jun;14(6):359–366. doi: 10.1002/bies.950140602. [DOI] [PubMed] [Google Scholar]
  5. Edwards M. D., Stuber C. W., Wendel J. F. Molecular-marker-facilitated investigations of quantitative-trait loci in maize. I. Numbers, genomic distribution and types of gene action. Genetics. 1987 May;116(1):113–125. doi: 10.1093/genetics/116.1.113. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Fatokun C. A., Menancio-Hautea D. I., Danesh D., Young N. D. Evidence for orthologous seed weight genes in cowpea and mung bean based on RFLP mapping. Genetics. 1992 Nov;132(3):841–846. doi: 10.1093/genetics/132.3.841. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Gottlieb L. D. Conservation and duplication of isozymes in plants. Science. 1982 Apr 23;216(4544):373–380. doi: 10.1126/science.216.4544.373. [DOI] [PubMed] [Google Scholar]
  8. Haldane J B, Waddington C H. Inbreeding and Linkage. Genetics. 1931 Jul;16(4):357–374. doi: 10.1093/genetics/16.4.357. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Helentjaris T., Weber D., Wright S. Identification of the genomic locations of duplicate nucleotide sequences in maize by analysis of restriction fragment length polymorphisms. Genetics. 1988 Feb;118(2):353–363. doi: 10.1093/genetics/118.2.353. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Hulbert S. H., Richter T. E., Axtell J. D., Bennetzen J. L. Genetic mapping and characterization of sorghum and related crops by means of maize DNA probes. Proc Natl Acad Sci U S A. 1990 Jun;87(11):4251–4255. doi: 10.1073/pnas.87.11.4251. [DOI] [PMC free article] [PubMed] [Google Scholar]
  11. Lander E. S., Green P., Abrahamson J., Barlow A., Daly M. J., Lincoln S. E., Newberg L. A., Newburg L. MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics. 1987 Oct;1(2):174–181. doi: 10.1016/0888-7543(87)90010-3. [DOI] [PubMed] [Google Scholar]
  12. Tanksley S. D., Bernatzky R., Lapitan N. L., Prince J. P. Conservation of gene repertoire but not gene order in pepper and tomato. Proc Natl Acad Sci U S A. 1988 Sep;85(17):6419–6423. doi: 10.1073/pnas.85.17.6419. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Tanksley S. D., Ganal M. W., Prince J. P., de Vicente M. C., Bonierbale M. W., Broun P., Fulton T. M., Giovannoni J. J., Grandillo S., Martin G. B. High density molecular linkage maps of the tomato and potato genomes. Genetics. 1992 Dec;132(4):1141–1160. doi: 10.1093/genetics/132.4.1141. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Whitkus R., Doebley J., Lee M. Comparative genome mapping of Sorghum and maize. Genetics. 1992 Dec;132(4):1119–1130. doi: 10.1093/genetics/132.4.1119. [DOI] [PMC free article] [PubMed] [Google Scholar]

Articles from Proceedings of the National Academy of Sciences of the United States of America are provided here courtesy of National Academy of Sciences

RESOURCES