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Bioinformatics logoLink to Bioinformatics
. 2015 Jun 10;31(12):i3–i8. doi: 10.1093/bioinformatics/btv310

ISMB/ECCB 2015 Proceedings Papers Committee

PMCID: PMC4765877

PROCEEDINGS

CO-CHAIRS, Yves Moreau, KU Leuven, Belgium; and

Niko Beerenwinkel, ETH Zürich, Basel, Switzerland

Applied Bioinformatics

Thomas Lengauer, Max Planck Institute for Informatics, Saarbrücken, Germany

Christophe Dessimoz, University College London, United Kingdom

Bioimaging and Data Visualization

Robert Murphy, Carnegie Mellon University, Pittsburgh, United States

Databases, Ontologies and Text Mining

Hagit Shatkay, University of Delaware, Newark, United States

Helen Parkinson, European Bioinformatics Institute (EMBL-EBI), Hinxton, United Kingdom

Disease Models and Epidemiology

Simon Kasif, Boston University, United States

Alice McHardy, Helmholtz Centre for Infection Research, Braunschweig, Germany

Evolution and Comparative Genomics

Bernard Moret, Swiss Federal Institute of Technology, Lausanne, Switzerland

Louxin Zhang, National University of Singapore

Gene Regulation and Transcriptions

Uwe Ohler, Humboldt University, Berlin, Germany

Zohar Yakhini, Agilent, Haifa, Israel

Mass Spectrometry and Proteomics

Olga Vitek, Northeastern University, Boston, United States

Knut Reinert, Free University of Berlin, Germany

Metabolic Networks

Hidde de Jong, INRIA, Grenoble, France

Bonnie Berger, Massachusetts Institute of Technology, Cambridge, United States

Population Genomics

Russell Schwartz, Carnegie Mellon University, Pittsburgh, United States

Jennifer Listgarten, Microsoft Research, Cambridge, United States

Protein Interact and Molecular Networks

Nataša Pržulj, Imperial College London, United Kingdom

Igor Jurisica, University of Toronto, Canada

Protein Structure and Function

Anna Tramontano, Sapienza University of Rome, Italy

Torsten Schwede, University of Basel, Switzerland

RNA Bioinformatics

Hanah Margalit, The Hebrew University of Jerusalem, Israel

Jerome Waldispuhl, McGill University, Montreal, Canada

Sequence Analysis

Michael Brudno, University of Toronto, Canada

Siu-Ming Yiu, The University of Hong Kong, China

PROCEEDINGS—PROGRAM COMMITTEE MEMBERS

Applied Bioinformatics

Rolf Backofen

Mukul S. Bansal

Davide Bau

Robert Beiko

Asa Ben-Hur

Jeremy Buhler

Kevin Cohen

Noah Daniels

Susmita Datta

Christophe Dessimoz

Rod Do

Nadia El-Mabrouk

Oliver Eulenstein

Matteo Fumagalli

Nicholas Furnham

Laurent Gatto

Sampsa Hautaniemi

Andreas Hildebrandt

Heng Huang

Curtis Huttenhower

Tamer Kahveci

Olga Kalinina

Carl Kingsford

Martin Krallinger

Thomas Lengauer

Ulf Leser

Po-Ru Loh

Florian Markowetz

Chad Myers

Bogdan Pasaniuc

Nico Pfeifer

Teresa Przytycka

Gunnar Rätsch

Dietrich Rebholz-Schuhmann

Ivo Sbalzarini

Sven-Eric Schelhorn

Marcel Schulz

Nives Skunca

Johannes Soeding

Jens Stoye

Asif Tamuri

Glenn Tesler

Fabio Vandin

Karin Verspoor

Jean-Philippe Vert

Chris Watkins

Amy Williams

Yu Xia

Ralf Zimmer

Bioimaging & Data Visualization

Scott Acton

Anne Carpenter

Luis Pedro Coelho

Tom Freeman

Stephen McKenna

Erik Meijering

Torsten Möller

Robert Murphy

Olaf Ronneberger

Ivo Sbalzarini

Carolina Wählby

Thomas Walter

Jieping Ye

Databases & Ontologies & Text Mining

Sophia Ananiadou

Cecilia Arighi

James Balhoff

Judy Blake

Olivier Bodenreider

Nigel Collier

Helen Cook

Simone Daminelli

Michel Dumontier

Juliane Fluck

Javier Garcia-Garcia

Rezarta Islamaj Dogan

Lars Juhl Jensen

Antonio Jimeno

Siddhartha Jonnalagadda

Halil Kilicoglu

Jung-Jae Kim

Maria Kissa

Martin Krallinger

Florian Leitner

Hee-Jin Lee

Hongfang Liu

James Malone

Terry Meehan

Anika Oellrich

Jong C. Park

Helen Parkinson

Michael Schroeder

Nigam Shah

Hagit Shatkay

Neil Smalheiser

Padmini Srinivasan

Morris Swertz

Manabu Torii

Yoshimasa Tsuruoka

Catalina O. Tudor

Francesco Vallania

Karin Verspoor

David Westergaard

Lana Yeganova

Disease Models & Epidemiology

Martin Aryee

Eric Banks

Karsten Borgwardt

Hector Corrada Bravo

Tianxi Cai

Aurel Cami

Mark Crovella

Charles Delisi

Jonathan Dreyfuss

Brian Haas

Benjamin Hescott

Eilinor Karlsson

Kirill Korolev

Joseph Lehar

Stan Letovsky

Manway Liu

Bud Mishra

Stefano Monti

T.M. Murali

Niranjan Nagarajan

Peter Park

Nico Pfeifer

Teresa Przytycka

Tim Reddy

Jaques Reifman

Bernard Renard

Evan Snitkin

Chang-Juin Wu

Or Zuk

Evolution & Comparative Genomics

Daniel Brown

Cedric Chauve

Miklos Csuros

Dan Gusfield

Daniel Huson

Tao Jiang

Yu Lin

Erick Matsen

Siavash Mirarab

Bernard Moret

Luay Nakhleh

Ben Raphael

Marc Robinson-Rechavi

Sebastian Roch

David Sankoff

Jens Stoye

Krister Swenson

Jijun Tang

Lusheng Wang

Louxin Zhang

Xiuwei Zhang

Gene Regulation & Transcriptomics

Edoardo M. Airoldi

Yoseph Barash

Tim Beissbarth

Panayiotis Takis Benos

Doron Betel

Richard Bonneau

Guillaume Bourque

Alan Boyle

Michael R. Brent

Harmen Bussemaker

Gal Chechik

Olof Emanuelsson

Jason Ernst

Terry Furey

David Gifford

Ivo Grosse

Sampsa Hautaniemi

Haiyan Huang

Tommy Kaplan

Sunduz Keles

Ilona Kifer

Philip Kim

Anshul Kundaje

Dena Leshkowitz

Shaun Mahony

John Marioni

Florian Markowetz

Satoru Miyano

Alexandre Morozov

Leelavati Narlikar

William Stafford Noble

Uwe Ohler

Tim Reddy

Markus Ringnér

Ron Shamir

Nathan Sheffield

Donna Slonim

Israel Steinfeld

Gary Stormo

Kai Tan

Amos Tanay

Achim Tresch

Erik van Nimwegen

Martin Vingron

Yu Xia

Zohar Yakhini

Yinyin Yuan

Deyou Zheng

Mass Spectrometry & Proteomics

Naomi Altman

Jan Baumbach

Ananth Grama

Henning Hermjakob

Jack Kellie

Oliver Kohlbacher

Lennart Martens

Alexey Nesvizhskii

Steffen Neumann

Knut Reinert

Bernhard Renard

Vera Vannoort

Olga Vitek

Sue Weintraub

Bing Zhang

Metabolic Networks

Bonnie Berger

Alexander Bockmayr

Hidde de Jong

Paul Jensen

Christoph Kaleta

Andreas Kremling

Isabel Rocha

Marie-France Sagot

Tomer Shlomi

Population Genomics

David Balding

Mukul S. Bansal

Alexis Battle

Nick Furlotte

Bjarni Halldórsson

Dan He

Gabriel Hoffman

Andrew Johnson

Nebojsa Jojic

Vladimir Jojic

Hyun Min Kang

Eimear Kenny

Bonnie Kirkpatrick

Jing Li

Christoph Lippert

Jennifer Listgarten

Iain Mathieson

Sara Mostafavi

Pier Palamara

Laxmi Parida

Leopold Parts

Bogdan Pasaniuc

Itsik Pe’er

Snehit Prabhu

Barbara Rakitsch

Saharon Rosset

Russell Schwartz

Protein Interactions & Molecular Networks

Patrick Aloy

Joel Bader

Ziv Bar-Joseph

Anastasia Baryshnikova

Jan Baumbach

Asa Ben-Hur

Bonnie Berger

Andreas Beyer

Juan Fernandez-Recio

Dario Ghersi

Debra Goldberg

Casey Greene

Henning Hermjakob

Trey Ideker

Igor Jurisica

Gunnar Klau

Rune Linding

Kathleen Marchal

Tijana Milenkovic

Chad Myers

Christine Nardini

Florencio Pazos

Matteo Pellegrini

Natasa Przulj

Ben Raphael

Denise Scholtens

Benno Schwikowski

Roded Sharan

Mona Singh

Lincold Stein

Uli Stelzl

Ulrich Stelzl

Michael Stumpf

Denis Thieffry

Jean-Philippe Vert

Michael Washburn

Ioannis Xenarios

Omer Yaveroglu

Hongyu Zhao

Protein Structure & Function

Jadwiga Bienkowska

Alexandre Bonvin

Lorenza Bordoli

Oliver Brock

Brian Chen

Thomas Dandekar

Charlotte Deane

Bruce Donald

Arne Elofsson

Andras Fiser

Dmitrij Frishman

Manuela Helmer-Citterich

Liisa Holm

Laurence Hurst

Rachel Kolodny

Arun Konagurthu

Christopher Langmead

Keren Lasker

Yaohang Li

Olivier Lichtarge

Ryan Lilien

Liam Mcguffin

Julie Mitchell

Vincent Moulton

Vikas Nanda

Domenico Raimondo

Ram Samudrala

Avner Schlessinger

Torsten Schwede

Yang Shen

Silvio Tosatto

Ilya Vakser

Allegra Via

Bjorn Wallner

Yusu Wang

Haim J. Wolfson

Yu Xia

Jinbo Xu

Dong Xu

Martin Zacharias

Jianyang Zeng

Yaoqi Zhou

RNA Bioinformatics

Rolf Backofen

Danny Barash

Peter Clote

Robin Dowell

Irit Gat-Viks

Daniel Gautheret

Ivo Hofacker

Fabrice Jossinet

Hanah Margalit

David Mathews

Irmtraud Meyer

Yann Ponty

Elena Rivas

Igor Ulitsky

Jerome Waldispuhl

Zasha Weinberg

Eric Westhof

Michal Ziv-Ukelson

Sequence Analysis

Tatsuya Akutsu

Can Alkan

Alberto Apostolico

Vikas Bansal

C.Titus Brown

Michael Brudno

Jeremy Buhler

Francis Chin

Hector Corrada Bravo

Iman Hajirasouliha

Fereydoun Hormozdiari

John Kececioglu

Sun Kim

Stefano Lonardi

Ion Mandoiu

Paul Medvedev

Ivan Ovcharenko

Knut Reinert

S.Cenk Sahinalp

Michael Schatz

Alexander Schliep

Tetsuo Shibuya

Jared Simpson

Jens Stoye

Haixu Tang

Glenn Tesler

Jerome Waldispuhl

Siu Ming Yiu

Alex Zelikovsky

Daniel Zerbino

ISMB/ECCB 2015 ORGANIZATION

HONORARY CONFERENCE CHAIR

Des Higgins, Honorary Conference Chair, University College Dublin, Ireland

CONFERENCE CHAIRS

Alex Bateman, Conference Co-Chair, European Bioinformatics Institute (EMBL-EBI), Cambridge, United Kingdom

Janet Kelso, Confererence Co-Chair, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany

STEERING COMMITTEE

Des Higgins, Honorary Conference Chair, University College Dublin, Ireland

Alex Bateman, Conference Co-Chair, European Bioinformatics Institute (EMBL-EBI), Cambridge, United Kingdom

Janet Kelso, Confererence Co-Chair, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany

Diane E. Kovats, ISCB Executive Director, Fairfax, United States

Steven Leard, ISCB Conferences Director, Edmonton, Canada

Christine Orengo, ISCB Conferences Committee Chair, University College London, United Kingdom

Burkhard Rost, Highlights Chair, Technical University Munich, Germany

Reinhard Schneider, ISCB Treasurer, University of Luxembourg

Alfonso Valencia, Spanish National Cancer Research Centre (CNIO), Madrid, Spain

SCIENTIFIC ORGANIZING COMMITTEE

Niko Beerenwinkel, ETH Zürich, Basel, Switzerland

Michelle Brazas, Ontario Institute for Cancer Research (OICR), Toronto, Canada

Yana Bromberg, Rutgers University, New Brunswick, United States

Alan Christoffels, SANBI, University of the Western Cape, South Africa

Milana Frenkel-Morgenstern, Spanish National Cancer Research Centre (CNIO), Madrid, Spain

Iddo Friedberg, Miami University, Oxford, United States

Dietlind Gerloff, Foundation for Applied Molecular Evolution (FfAME), Gainesville, United States

Francisco Melo Ledermann, Pontificia Universidad Catolica de Chile, Santiago, Chile

Fran Lewitter, Whitehead Institute for Biomedial Research, Cambridge, United States

Michael Linial, The Hebrew University of Jerusalem, Israel

Rodrigo Lopez, European Bioinformatics Institute, EMBL-EBI, Cambridge, United Kingdom

Yves Moreau, KU Leuven, Belgium

Guilherme Oliveira, FIOCRUZ, Belo Horizonte, Brazil

Christine Orengo, University College London, United Kingdom

Burkhard Rost, Technical University Munich, Germany

Reinhard Schneider, University of Luxembourg

CONFERENCE THEME CHAIRS

Disease: Yana Bromberg, Rutgers University, New Brunswick, United States

Data: Janet Kelso, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany

Systems: Nicolas Le Novère, Babraham Institute, Cambridge, United Kingdom

Genes: Martin Vingron, Max Planck Institute for Molecular Genetics, Berlin, Germany

Proteins: Ioannis Xenarios, University of Lausanne, Switzerland

APPLIED KNOWLEDGE EXCHANGE SESSIONS (AKES)

Co-chairs: Fran Lewitter, Whitehead Institute for Biomedial Research, United States and Michelle Brazas, Ontario Institute for Cancer Research (OICR), Toronto, Canada

ART & SCIENCE

Chair: Milana Frenkel-Morgenstern, Spanish National Cancer Research Centre (CNIO), Madrid, Spain

Ricardo de Matos Simoes, Queen’s University Belfast, Ireland

Alaa Abi-Haidar, Sorbonne Universities, France

Venkata Satagopam, Luxembourg Centre For Systems Biomedicine (LCSB), University of Luxembourg

HIGHLIGHTS

Co-chairs: Burkhard Rost, Technical University Munich, Germany; and Reinhard Schneider, University of Luxembourg

Bonnie Berger, Massachusetts Institute of Technology, Cambridge, United States

Eric Bongcam-Rudloff, Uppsala University, Sweden

Yana Bromberg, Rutgers University, New Brunswick, United States

Terry Gaasterland, University of California, San Diego, United States

Yanay Ofran, Bar Ilan University, Ramat-Gan, Israel

Paul Horton, Computational Biology Research Center, AIST, Tokyo, Japan

Maricel Kann, University of Maryland, Baltimore County, United States

Toni Kazic, University of Missouri, Columbia, United States

Janet Kelso, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany

Stefan Kramer, Technical University Munich, Germany

Michal Linial, The Hebrew University of Jerusalem, Israel

Predrag Radivojac, Indiana University, Bloomington, United States

Mona Singh, Princeton University, United States

Donna Slonim, Tufts University, Medford, United States

Ioannis Xenarios, University of Lausanne, Switzerland

LATE BREAKING RESEARCH

Chair: Francisco Melo Ledermann, Pontificia Universidad Catolica de Chile, Santiago, Chile

Eduardo Agosin, Pontificia Universidad Catolica de Chile, Santiago, Chile

Daniel Almonacid, Universidad Andres Bello, Chile

Emidio Carpriotti, University of Alabama at Birmingham, United States

Lenore Cowen, Tufts University, Medford, United States

Damien Devos, Universidad Pablo de Olavide-CSIC, Sevilla, Spain

Susana Eyheramendi, Pontificia Universidad Catolica de Chile, Santiago, Chile

Fernando Faunes, Pontificia Universidad Catolica de Chile, Santiago, Chile

Evandro Ferrada, Santa Fe Institute, United States

Diego Ferreiro, University of Buenos Aires, Argentina

Carlos Lagos, Pontificia Universidad Catolica de Chile, Santiago, Chile

Rodrigo Lopez, European Bioinformatics Institute, Cambridge, United Kingdom

Marcelo Lopez-Lastra, Pontificia Universidad Catolica de Chile, Santiago, Chile

Marc A. Marti-Renom (ICREA), Institució Catalana de Recerca i Estudis Avançats, Barcelona, Spain

Rafael Medina, Pontificia Universidad Catolica de Chile, Santiago, Chile

Morton Nielsen, Technical University of Denmark

Gunnar Rätsch, Memorial Sloan Kettering Cancer Center, New York, United States

Gonzalo Riadi, Pontificia Universidad Catolica de Chile, Santiago, Chile

Manfred Sippl, University of Salzberg, Germany

Andreas Schüller, Pontificia Universidad Catolica de Chile, Santiago, Chile

Alex Slater, Pontificia Universidad Catolica de Chile, Santiago, Chile

Ludovic Vallier, University of Cambridge, United Kingdom

Dirk Walther, Max Planck Institute of Molecular Plant Physiology, Potsdam, Germany

POSTERS

Poster Chair: Iddo Friedberg, Miami University, Oxford, United States; and Co-chair: Yana Bromberg, Rutgers University, New Brunswick, United States

Frederic Bastian, Swiss Institute of Bioinformatics, University of Lausanne, Switzerland

Titus Brown, UC Davis Genome Center, United States

Hannah Carter, University of California, San Diego, United States

Clair Colas, Mount Sinai Hospital, New York, United States

Manuel Corpas, Wellcome Trust Sanger Institute, Cambridge, United Kingdom

Jeroen de Ridder, Delft University of Technology, The Netherlands

Mikhail G. Dozmorov, Virginia Commonwealth University, Richmond, United States

Nils Gehlenborg, Harvard Medical School, Cambridge, United States

Tatyana Goldberg, Technical University Munich, Germany

Yuxiang Jiang, Indiana University, Bloomington, United States

John Karro, Miami University, Oxford, United States

Hande Küçük, University of Miami, United States

Fran Lewitter, Whitehead Institute of Biomedical Research, Cambridge, United States

Yannick Mahlich, Technical University Munich, Germany

Jason McDermott, Pacific Northwest National Laboratory, Richland, United States

James Morton, University of Colorado, United States

David Ream, Miami University, Oxford, United States

Jonas Reeb, Technical University Munich, Germany

Venkata Satagopam, University of Luxembourg

Christine Sinoquet, University of Nantes, France

Eric Talevich, University of California, San Francisco, United States

Jie Tan, Dartmouth College, Hanover, United States

Peter Ung, Mount Sinia Hospital, New York, United States

Yan Zhang, Yale University, New Haven, United States

SPECIAL INTEREST GROUPS

Chair: Alan Christoffels, SANBI, University of the Western Cape, South Africa

Jill Mesirov, Broad Institute of MIT and Harvard, Cambridge, United States

Christine Orengo, University College London, United Kingdom

Guilherme Oliveira, FIOCRUZ-Minas, Brazil

SPECIAL SESSIONS

Chair: Michael Linial, The Hebrew University of Jerusalem, Israel

STUDENT COUNCIL SYMPOSIUM

Chair: Katie Wilkins, Cornell University, United States

Co-chair: Farzana Rahman, Chair, University of South Wales, United Kingdom

Program Chair: Gonzalo Parra, Buenos Aires University, Argentina

Travel Fellowship Chair: Margherita Francescatto, German Center for Neurodegenerative Diseases (DZNE), Tübingen, Germany

Finance Chair: Jakob Berg Jespersen, Technical University of Denmark

Communications Chair: Bart Cuypers, University of Antwerp, Belgium

Web Committee Chair: Mehedi Hassan, University of South Wales, United Kingdom

Committee Members:

Dan DeBlasio, University of Arizona, United States

Micaela Polay Espinoza, Sorbonne Universities, France

Carla Padilla Franzotti, National University of Tucuman, Argentina

Alexander Junge, University of Copenhagen, Denmark

Nina Verstraete, University of Buenos Aires, Argentina

TECHNOLOGY TRACK

Chair: Rodrigo Lopez, Chair, European Bioinformatics Institute, Cambridge, United Kingdom

Christophe Blanchet, CNRS, Lyon-Gerland, France

Dominic Clark, European Bioinformatics Institute, Cambridge, United Kingdom

Andrew Cowley, European Bioinformatics Institute, Cambridge, United Kingdom

Desmond Higgins, Conway Institute, Dublin, Ireland

William Pearson, European Bioinformatics Institute, Cambridge, United Kingdom

TRAVEL FELLOWSHIPS

Chair: Guilherme Oliveira, Chair, FIOCRUZ- Minas, Brazil

Manuel Corpas, Wellcome Trust Sanger Institute, United Kingdom

Thomas Abeel, Delft University of Technology, The Netherlands

Lonnie Welch, University of Ohio, Athens, United States

Venkata Satagopam, University of Luxembourg

Magali Michaut, The Netherlands Cancer Institute, Amsterdam, The Netherlands

Ronnie Alves, The Computational Biology Institute(IBC), LIRMM, France

Gabriel Fernandes

Joel Arrais, University of Coimbra, Portugal

Alan Christoffels, University of the Western Cape, South Africa

Lucia Peixoto, Washington State University, Spokane, United States

Ramy Karam Aziz, Cairo University, Egypt

Bent Petersen, Center for Biological Sequence Analysis, Lyngby, Denmark

Rohit Ghai, Universidad Miguel Hernandez, San Juan de Alicante, Spain

WORKSHOPS

Christine Orengo, University College London, United Kingdom


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