The title compound is an intermediate in the synthesis of linkers for coordination polymers. Centrosymmetric molecules are packed along the a axis to form corrugated layers parallel to the ac plane.
Keywords: crystal structure, intermediate compound for organic linkers in MOF synthesis, centrosymmetric molecule
Abstract
In the title compound, C18H18O6, the benzene rings are coplanar due to the centrosymmetric nature of the molecule, with an inversion centre located at the midpoint of the C—C bond between the two rings. Consequently, the methyl carboxylate substituents are oriented in a trans fashion with regards to the bond between the benzene rings. The methyl carboxylate and methoxy substituents are rotated slightly out of plane relative to their parent benzene rings, with dihedral and torsion angles of 18.52 (8) and −5.22 (15)°, respectively. The shortest O⋯H contact between neighbouring molecules is about 2.5 Å. Although some structure-directing contributions from C—H⋯O hydrogen-bonding interactions are possible, the crystal packing seems primarily directed by weak van der Waals forces.
Chemical context
The title compound is an intermediate in the synthesis of 4,4′-dimethoxybiphenyl-3,3′-biphenyldicarboxylic acid, an organic linker for use in the synthesis of coordination polymers (Lundvall et al., 2016 ▸). The title compound, C18H18O6, has previously been reported (Wang et al., 2009 ▸; Kar et al., 2009 ▸), however, its crystal structure was undetermined up until now.
Structural commentary
The asymmetric unit of the title compound comprises one half of the molecule, with an inversion centre located at the midpoint of the benzene–benzene bond (Fig. 1 ▸). The benzene rings are coplanar due to symmetry. This is somewhat unexpected since a slight torsion between the two rings is a common feature in biphenyl compounds. The methyl carboxylate substituents are oriented trans relative to the benzene–benzene bond, and the plane of the substituent makes a dihedral angle of 18.52 (8)° relative to the parent benzene ring. The methoxy substituent is nearly coplanar with the parent benzene ring, and a torsion angle C5—C4—O1—C9 of only −5.22 (15)° is observed. The methyl groups of the methyl carboxylate and methoxy substituents are oriented away from each other to accommodate the steric demands of these groups.
Figure 1.
The molecular structure of the title compound with atom labels and 50% probability displacement ellipsoids. Non-labelled atoms are generated by the symmetry code (−x +
, −y +
, −z). H atoms have been omitted for clarity.
Supramolecular features
The molecules are packed in the unit cell with the axis of the biphenyl scaffolds parallel to each other. The axis of the biphenyl moiety is oriented approximately 20° off the a axis of the unit cell (Fig. 2 ▸), and the molecules form corrugated layers extending parallel to the ac plane (Fig. 3 ▸). The packing is not directed by strong intermolecular bonding since the shortest O⋯H contact is about 2.5 Å (Table 1 ▸). However, weak C—H⋯O interactions between neighbouring molecules seem to have an influence on the crystal packing (Fig. 4 ▸).
Figure 2.
Packing diagram of the title compound viewed along the b axis.
Figure 3.
Packing diagram of the title compound viewed along the a axis. H atoms have been omitted for clarity.
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C9—H9C⋯O1i | 0.98 | 2.55 | 3.4759 (15) | 158 |
| C8—H8B⋯O3ii | 0.98 | 2.50 | 3.3407 (15) | 144 |
Symmetry codes: (i)
; (ii)
.
Figure 4.
Graphical representation of the shortest intermolecular O⋯H contacts, illustrated as dashed blue lines.
Synthesis and crystallization
The title compound was synthesized by a slightly modified procedure of the method described by Wang et al. (2009 ▸). Synthetic details are given in the Supporting Information of our recent contribution (Lundvall et al., 2016 ▸). Single crystals suitable for structure determination were obtained by recrystallizing the title compound from chloroform solution.
Refinement
Crystal data, data collection and structure refinement details are summarized in Table 2 ▸. H atoms were positioned geometrically at distances of 0.95 (CH) and 0.98 Å (CH3) and were refined using a riding model with U iso(H) = 1.2U eq(CH) and U iso(H)=1.5U eq(CH3).
Table 2. Experimental details.
| Crystal data | |
| Chemical formula | C18H18O6 |
| M r | 330.32 |
| Crystal system, space group | Monoclinic, C2/c |
| Temperature (K) | 105 |
| a, b, c (Å) | 28.5800 (14), 4.0632 (2), 14.4806 (7) |
| β (°) | 115.100 (1) |
| V (Å3) | 1522.78 (13) |
| Z | 4 |
| Radiation type | Mo Kα |
| μ (mm−1) | 0.11 |
| Crystal size (mm) | 0.56 × 0.29 × 0.22 |
| Data collection | |
| Diffractometer | Bruker PHOTON CCD |
| Absorption correction | Multi-scan (SADABS; Bruker, 2007 ▸) |
| T min, T max | 0.602, 0.746 |
| No. of measured, independent and observed [I > 2σ(I)] reflections | 17902, 2053, 1819 |
| R int | 0.037 |
| (sin θ/λ)max (Å−1) | 0.685 |
| Refinement | |
| R[F 2 > 2σ(F 2)], wR(F 2), S | 0.038, 0.109, 1.10 |
| No. of reflections | 2053 |
| No. of parameters | 111 |
| H-atom treatment | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 0.41, −0.24 |
Supplementary Material
Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S2056989016002449/wm5270sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989016002449/wm5270Isup2.hkl
Supporting information file. DOI: 10.1107/S2056989016002449/wm5270Isup3.cml
CCDC reference: 1452330
Additional supporting information: crystallographic information; 3D view; checkCIF report
Acknowledgments
We acknowledge support from the Research Council of Norway (Project No. 190980), the Norwegian national infrastructure for X-ray diffraction and scattering (RECX) and the Department of Chemistry, UiO.
supplementary crystallographic information
Crystal data
| C18H18O6 | F(000) = 696 |
| Mr = 330.32 | Dx = 1.441 Mg m−3 |
| Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
| a = 28.5800 (14) Å | Cell parameters from 9942 reflections |
| b = 4.0632 (2) Å | θ = 2.8–29.1° |
| c = 14.4806 (7) Å | µ = 0.11 mm−1 |
| β = 115.100 (1)° | T = 105 K |
| V = 1522.78 (13) Å3 | Needle, colourless |
| Z = 4 | 0.56 × 0.29 × 0.22 mm |
Data collection
| Bruker PHOTON CCD diffractometer | 2053 independent reflections |
| Radiation source: fine-focus sealed tube | 1819 reflections with I > 2σ(I) |
| Graphite monochromator | Rint = 0.037 |
| ω scans | θmax = 29.2°, θmin = 2.8° |
| Absorption correction: multi-scan (SADABS; Bruker, 2007) | h = −38→38 |
| Tmin = 0.602, Tmax = 0.746 | k = −5→5 |
| 17902 measured reflections | l = −19→19 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.038 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.109 | H-atom parameters constrained |
| S = 1.10 | w = 1/[σ2(Fo2) + (0.0534P)2 + 1.1903P] where P = (Fo2 + 2Fc2)/3 |
| 2053 reflections | (Δ/σ)max < 0.001 |
| 111 parameters | Δρmax = 0.41 e Å−3 |
| 0 restraints | Δρmin = −0.24 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| C1 | 0.22923 (4) | 0.2306 (3) | 0.01755 (7) | 0.0163 (2) | |
| C2 | 0.17986 (4) | 0.3583 (3) | −0.03782 (7) | 0.0175 (2) | |
| H2 | 0.1730 | 0.4703 | −0.0998 | 0.021* | |
| C3 | 0.14011 (4) | 0.3300 (3) | −0.00694 (7) | 0.0170 (2) | |
| C4 | 0.14924 (4) | 0.1625 (3) | 0.08424 (8) | 0.0170 (2) | |
| C5 | 0.19832 (4) | 0.0299 (3) | 0.14041 (8) | 0.0193 (2) | |
| H5 | 0.2052 | −0.0851 | 0.2020 | 0.023* | |
| C6 | 0.23708 (4) | 0.0637 (3) | 0.10753 (8) | 0.0193 (2) | |
| H6 | 0.2701 | −0.0293 | 0.1473 | 0.023* | |
| C7 | 0.09039 (4) | 0.4858 (3) | −0.07720 (8) | 0.0192 (2) | |
| C8 | 0.01027 (4) | 0.7077 (3) | −0.10223 (9) | 0.0256 (3) | |
| H8A | −0.0111 | 0.7454 | −0.0653 | 0.038* | |
| H8B | −0.0086 | 0.5685 | −0.1618 | 0.038* | |
| H8C | 0.0184 | 0.9191 | −0.1246 | 0.038* | |
| C9 | 0.11816 (5) | −0.0599 (3) | 0.20034 (8) | 0.0229 (2) | |
| H9A | 0.0868 | −0.0586 | 0.2121 | 0.034* | |
| H9B | 0.1470 | 0.0309 | 0.2601 | 0.034* | |
| H9C | 0.1262 | −0.2863 | 0.1888 | 0.034* | |
| O1 | 0.10999 (3) | 0.1361 (2) | 0.11283 (6) | 0.02064 (19) | |
| O2 | 0.05778 (3) | 0.5450 (2) | −0.03563 (6) | 0.0232 (2) | |
| O3 | 0.08127 (3) | 0.5572 (3) | −0.16406 (7) | 0.0354 (3) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.0173 (5) | 0.0161 (5) | 0.0141 (4) | −0.0009 (4) | 0.0053 (4) | −0.0023 (4) |
| C2 | 0.0182 (5) | 0.0194 (5) | 0.0133 (4) | −0.0012 (4) | 0.0051 (4) | −0.0004 (4) |
| C3 | 0.0162 (4) | 0.0181 (5) | 0.0142 (4) | −0.0010 (4) | 0.0040 (4) | −0.0018 (4) |
| C4 | 0.0187 (5) | 0.0168 (5) | 0.0156 (4) | −0.0020 (4) | 0.0072 (4) | −0.0027 (4) |
| C5 | 0.0216 (5) | 0.0201 (5) | 0.0153 (4) | 0.0013 (4) | 0.0071 (4) | 0.0023 (4) |
| C6 | 0.0186 (5) | 0.0208 (5) | 0.0164 (5) | 0.0025 (4) | 0.0054 (4) | 0.0008 (4) |
| C7 | 0.0165 (5) | 0.0223 (5) | 0.0170 (5) | −0.0015 (4) | 0.0055 (4) | 0.0001 (4) |
| C8 | 0.0185 (5) | 0.0324 (6) | 0.0240 (5) | 0.0064 (5) | 0.0073 (4) | 0.0036 (5) |
| C9 | 0.0288 (6) | 0.0234 (6) | 0.0203 (5) | 0.0022 (4) | 0.0141 (4) | 0.0036 (4) |
| O1 | 0.0207 (4) | 0.0247 (4) | 0.0184 (4) | 0.0013 (3) | 0.0101 (3) | 0.0038 (3) |
| O2 | 0.0193 (4) | 0.0323 (5) | 0.0172 (4) | 0.0060 (3) | 0.0068 (3) | 0.0015 (3) |
| O3 | 0.0223 (4) | 0.0622 (7) | 0.0219 (4) | 0.0115 (4) | 0.0096 (3) | 0.0158 (4) |
Geometric parameters (Å, º)
| C1—C2 | 1.3940 (14) | C6—H6 | 0.9500 |
| C1—C6 | 1.3998 (14) | C7—O3 | 1.2067 (14) |
| C1—C1i | 1.4846 (19) | C7—O2 | 1.3285 (13) |
| C2—C3 | 1.3909 (14) | C8—O2 | 1.4490 (13) |
| C2—H2 | 0.9500 | C8—H8A | 0.9800 |
| C3—C4 | 1.4080 (14) | C8—H8B | 0.9800 |
| C3—C7 | 1.4928 (14) | C8—H8C | 0.9800 |
| C4—O1 | 1.3549 (12) | C9—O1 | 1.4293 (13) |
| C4—C5 | 1.3971 (15) | C9—H9A | 0.9800 |
| C5—C6 | 1.3859 (15) | C9—H9B | 0.9800 |
| C5—H5 | 0.9500 | C9—H9C | 0.9800 |
| C2—C1—C6 | 116.04 (9) | O3—C7—O2 | 123.09 (10) |
| C2—C1—C1i | 121.65 (11) | O3—C7—C3 | 122.32 (10) |
| C6—C1—C1i | 122.31 (11) | O2—C7—C3 | 114.58 (9) |
| C3—C2—C1 | 123.36 (9) | O2—C8—H8A | 109.5 |
| C3—C2—H2 | 118.3 | O2—C8—H8B | 109.5 |
| C1—C2—H2 | 118.3 | H8A—C8—H8B | 109.5 |
| C2—C3—C4 | 119.32 (9) | O2—C8—H8C | 109.5 |
| C2—C3—C7 | 114.66 (9) | H8A—C8—H8C | 109.5 |
| C4—C3—C7 | 126.03 (9) | H8B—C8—H8C | 109.5 |
| O1—C4—C5 | 123.27 (9) | O1—C9—H9A | 109.5 |
| O1—C4—C3 | 118.48 (9) | O1—C9—H9B | 109.5 |
| C5—C4—C3 | 118.25 (10) | H9A—C9—H9B | 109.5 |
| C6—C5—C4 | 120.87 (10) | O1—C9—H9C | 109.5 |
| C6—C5—H5 | 119.6 | H9A—C9—H9C | 109.5 |
| C4—C5—H5 | 119.6 | H9B—C9—H9C | 109.5 |
| C5—C6—C1 | 122.15 (10) | C4—O1—C9 | 118.03 (8) |
| C5—C6—H6 | 118.9 | C7—O2—C8 | 114.87 (9) |
| C1—C6—H6 | 118.9 | ||
| C6—C1—C2—C3 | 0.89 (16) | C2—C1—C6—C5 | −0.64 (16) |
| C1i—C1—C2—C3 | −179.29 (11) | C1i—C1—C6—C5 | 179.55 (12) |
| C1—C2—C3—C4 | −0.55 (16) | C2—C3—C7—O3 | 17.33 (16) |
| C1—C2—C3—C7 | 179.71 (10) | C4—C3—C7—O3 | −162.39 (12) |
| C2—C3—C4—O1 | −179.68 (9) | C2—C3—C7—O2 | −161.30 (10) |
| C7—C3—C4—O1 | 0.03 (16) | C4—C3—C7—O2 | 18.97 (16) |
| C2—C3—C4—C5 | −0.08 (15) | C5—C4—O1—C9 | −5.22 (15) |
| C7—C3—C4—C5 | 179.63 (10) | C3—C4—O1—C9 | 174.36 (10) |
| O1—C4—C5—C6 | 179.90 (10) | O3—C7—O2—C8 | −0.89 (17) |
| C3—C4—C5—C6 | 0.32 (16) | C3—C7—O2—C8 | 177.74 (10) |
| C4—C5—C6—C1 | 0.05 (17) | C2—C1—C1i—C6i | 0.2 (2) |
Symmetry code: (i) −x+1/2, −y+1/2, −z.
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C9—H9C···O1ii | 0.98 | 2.55 | 3.4759 (15) | 158 |
| C8—H8B···O3iii | 0.98 | 2.50 | 3.3407 (15) | 144 |
Symmetry codes: (ii) x, y−1, z; (iii) −x, y, −z−1/2.
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S2056989016002449/wm5270sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989016002449/wm5270Isup2.hkl
Supporting information file. DOI: 10.1107/S2056989016002449/wm5270Isup3.cml
CCDC reference: 1452330
Additional supporting information: crystallographic information; 3D view; checkCIF report




