Abstract
In vitro motility assays enabled the analysis of coupling between ATP hydrolysis and movement of myosin along actin filaments or kinesin along microtubules. Single-molecule assays using laser trapping have been used to obtain more detailed information about kinesins, myosins, and processive DNA enzymes. The combination of in vitro motility assays with laser-trap measurements has revealed detailed dynamic structural changes associated with the ATPase cycle. This protocol describes a method for attaching anti-GFP (green fluorescent protein) antibodies to microspheres. GFP-motor fusion proteins can then be adsorbed to the microspheres for use in single-molecule motility studies and optical trapping experiments.
MATERIALS
It is essential that you consult the appropriate Material Safety Data Sheets and your institution’s Environmental Health and Safety Office for proper handling of equipment and hazardous materials used in this protocol.
Reagents
Anti-GFP antibody (mouse monoclonal, 0.05 mg/mL in PBS [mAb3E6]; Qbiogene/MP Biomedicals or similar)
Beads (carboxylated microspheres, 0.5- to 1-μm diameter; Polysciences or similar)
Bovine serum albumin labeled with tetramethyl rhodamine isothiocyanate (TMR-BSA)
Phosphate-buffered saline (PBS; 100 mM)
Equipment
Centrifuge
Incubator preset to 22°C
METHOD
Dilute 10 μL of beads in 100 μL of PBS. Centrifuge at 20,000g for 1 min at 22°C.
Resuspend beads in another 100 μL of PBS and repeat Step 1.
Resuspend beads in 20 μL of anti-GFP antibody +1 μL of TMR-BSA. Incubate for 5 min at 22°C.
Centrifuge beads at 20,000g for 1 min at 22°C.
Resuspend beads in 20 μL of PBS.
Repeat Steps 4 and 5 three times.
Acknowledgments
We thank Dr. Henrik Flyvbjerg for invaluable discussions. This work was supported by a grant from the National Institutes of Health (GM33289) to J.A.S.
Footnotes
RELATED INFORMATION
A detailed discussion of optical trapping can be found in Optical Traps to Study Properties of Molecular Motors (Spudich et al. 2011a). A protocol is also available for The Optical Trapping Dumbbell Assay for Nonprocessive Motors or Motors That Turn around Filaments (Spudich et al. 2011b).
References
- Spudich JA, Rice SE, Rock RS, Purcell TJ, Warrick HM. Optical traps to study properties of molecular motors. Cold Spring Harb Protoc. 2011a doi: 10.1101/pdb.top066662. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Spudich JA, Rice SE, Rock RS, Purcell TJ, Warrick HM. The optical trapping dumbbell assay for nonprocessive motors or motors that turn around filaments. Cold Spring Harb Protoc. 2011b doi: 10.1101/pdb.prot066688. [DOI] [PMC free article] [PubMed] [Google Scholar]
