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. 2016 Mar 28;11(3):e0152753. doi: 10.1371/journal.pone.0152753

Correction: Diversity of Intestinal Clostridium coccoides Group in the Japanese Population, as Demonstrated by Reverse Transcription-Quantitative PCR

Takashi Kurakawa, Kiyohito Ogata, Kazunori Matsuda, Hirokazu Tsuji, Hiroyuki Kubota, Toshihiko Takada, Yukiko Kado, Takashi Asahara, Takuya Takahashi, Koji Nomoto
PMCID: PMC4809554  PMID: 27019282

There are multiple errors in the values for product size in Table 2, “Primer information.” Please see the corrected Table 2 here.

Table 2. Primer information.

group/species Standard Strain Strain No. Primer name Sequence (5'-3') Anealing Temp (°C) Product size (bp)
Clostridium coccoides group Blautia producta JCM 1471T g-Ccoc-F AAATGACGGTACCTGACTAA 55 440
g-Ccoc-R CTTTGAGTTTCATTCTTGCGAA
Eubacterium ventriosum Eubacterium ventriosum ATCC 27560T s-Event-F GTCGGGGGACAATAGTTCC 55 451
s-Event-R ATTTGCTTACCCTCACGGGG
Eubacterium hallii Eubacterium hallii DSM 3353T s-Ehal-F GTGTCGGGGCCGTATAGG 55 435
s-Ehal-R GTTCGCCTCACTCTGTGAC
Coprococcus eutactus Coprococcus eutactus ATCC 27759T s-Ceut-F CTGGAGCTTGCTCCGGCCGATTT 55 656
s-Ceut-R GTCAGTAGCAGTCCAGTAAGT
Eubacterium eligens Eubacterium eligens DSM 3376T s-Eeli-F TGTCGGGGCCCATAAGGG 55 189
s-Eeli-R CATTACTGTCCGGTCAGTG
Eubacterium rectale Eubacterium rectale ATCC 33656T s-Erec-F TTCTGACCGGTACTTAACCGTACC 55 281
s-Erec-R TTTGCTCGGCTTCACAGCTTT
Eubacterium ramulus Eubacterium ramulus ATCC 29099T s-Eram-F GAGCGTAGGCGGTCCTGC 55 452
s-Eram-R GGGAAAACACATTACATGTTCTG
Genus Blautia Blautia producta JCM 1471T g-Blau-F GTGAAGGAAGAAGTATCTCGG 55 559
g-Blau-R TTGGTAAGGTTCTTCGCGTT
Clostridium symbiosum Clostridium symbiosum JCM 1297T s-Csym-F TAAGCGCACAGTATTGCATGATA 55 816
s-Csym-R CGTTACTCCCCCGTCGAG
Fusicatenibacter saccharivorans Fusicatenibacter saccharivorans JCM 18507T s-Fsac-F CTGCATTGGAAACTGTCTGG 55 388
s-Fsac-R CGTTACGGGCCGGTCATC
Clostridium asparagiforme Clostridium asparagiforme DSM 15981T s-Casp-F GTTTTCGGATGGATTCTAGATG 55 568
s-Casp-R CTCCTGCACTCTAGCTTGA
Clostridium hathewayi Clostridium hathewayi DSM 13479T s-Chath-F CTTGACATCCCACTGAAAACAC 55 162
s-Chath-R AGAGTGCCCGACTCTACTC
Clostridium indolis subgroup Clostridium indolis JCM 1380T sg-Cind-F ACCAAGTCTTGACATCGGAATGA 55 298
sg-Cind-R TTGCTCCAGATCGCTCCTT
Ruminococcus gnavus Ruminococcus gnavus ATCC 29149T s-Rgna-F CTTGCTGGACGATGACTGAC 55 288
s-Rgna-R CTCCGATTAAAGAGCGGTCAGA
Anaerostipes caccae Anaerostipes caccae DSM 14662T s-Acac-F GTTTTCGGATGGATTTCCTATAT 55 143
s-Acac-R CTTTTCACACTGAATCATGCGATT
Roseburia intestinalis Roseburia intestinalis DSM 14610T s-Rint-F GCACAGGGTCGCATGACCT 60 818
s-Rint-R AACACATTACATGTTCTGTCATC
Coprococcus comes Coprococcus comes ATCC 27758T s-Ccom-F GTGACCGGCGTGTAATGACG 55 150
s-Ccom-R CAGAGTGCCCATCCGAATTG
Clostridium nexile Clostridium nexile ATCC 27757T s-Cnex-F GGATTTCTTCGGATTGAAGTTTTT 55 517
s-Cnex-R TTTCACATCAGACTTACACAAC
Genus Dorea Dorea formicigenerans DSM 3992T g-Dor-F GCAGCTAACGCAATAAGCAG 55 165
g-Dor-R CTTCCATTACGAAGCGGTC
Clostridium scindens Clostridium scindens JCM 6567T s-Csci-F GCATTTGGAACTGCGTGG 55 387
s-Csci-R CGTTACGCGCTTTGGCATCG
Clostridium hylemonae Clostridium hylemonae DSM 15053T s-Chyl-F AAGAGATTAGCTTGCTAAGATCAG 55 145
s-Chyl-R TCTACCATGCGGTACTGAGGT
Ruminococcus torques Ruminococcus torques ATCC 17756T s-Rtor-F CGAAGCACTTTGCTTAGA 55 528
s-Rtor-R ACATCAGACTTGCCCATC
Ruminococcus lactaris Ruminococcus lactaris ATCC 19176T s-Rlac-F GGGAGCGTAGACGGAGCA 55 452
s-Rlac-R AAGCAGACATTACTCTGCCG

Reference


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