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. Author manuscript; available in PMC: 2017 May 1.
Published in final edited form as: Biochim Biophys Acta. 2015 Oct 26;1858(5):988–994. doi: 10.1016/j.bbamem.2015.10.014

Branched Phospholipids Render Lipid Vesicles More Susceptible to Membrane-active Peptides

Natalie J Mitchell 1, Pamela Seaton 1, Antje Pokorny 1,*
PMCID: PMC4809760  NIHMSID: NIHMS737280  PMID: 26514602

Abstract

Iso- and anteiso-branched lipids are abundant in the cytoplasmic membranes of bacteria. Their function is assumed to be similar to that of unsaturated lipids in other organisms – to maintain the membrane in a fluid state. However, the presence of terminally branched membrane lipids is likely to impact other membrane properties as well. For instance, lipid acyl chain structure has been shown to influence the activity of antimicrobial peptides. Moreover, the development of resistance to antimicrobial agents in Staphylococcus aureus is accompanied by a shift in the fatty acid composition towards a higher fraction of anteiso-branched lipids. Little is known about how branched lipids and the location of the branch point affect the activity of membrane-active peptides. We hypothesized that bilayers containing lipids with low phase transition temperatures would tend to exclude peptides and be less susceptible to peptide-induced perturbation than those made from higher temperature melting lipids. To test this hypothesis, we synthesized a series of asymmetric phospholipids that only differ in the type of fatty acid esterified at the sn-2 position of the lipid glycerol backbone. We tested the influence of acyl chain structure on peptide activity by measuring the kinetics of release from dye-encapsulated lipid vesicles made from these synthetic lipids. The results were compared to those obtained using vesicles made from S. aureus and S. sciuri membrane lipids extracts. Anteiso-branched phospholipids, which melt at very low temperatures, produced lipid vesicles that were only slightly less susceptible to peptide-induced dye release than those made from the iso-branched isomer. However, liposomes made from bacterial phospholipid extracts were generally much more resistant to peptide-induced perturbation than those made from any of the synthetic lipids. The results suggest that the increase in the fraction of anteiso-branched fatty acids in antibiotic-resistant strains of S. aureus is unlikely to be the sole factor responsible for the observed increased antibiotic resistance.

Keywords: bacterial lipids, branched phospholipids, anteiso, 12-methylmyristic acid, 03B4;-lysin, amphipathic peptides, antimicrobial peptides, carboxyfluorescein release

INTRODUCTION

Membrane-active peptides are ubiquitous in all living organisms where they fulfill a variety of functions. They contribute to intercellular communication, are secreted for offensive and defensive purposes by bacteria, plants, and fungi, and are part of the innate immune systems in animals (13). Peptides with antimicrobial properties preferentially interact with the cytoplasmic membranes of bacteria and other microorganisms, and, thus, provide a blueprint for the development of novel antibiotics – at least in principle. The elucidation of the mode of action of specifically antimicrobial peptides has been the subject of intense research for about three decades. However, progress in the synthesis and use of antimicrobial peptides as antibiotics has been slow and our understanding of the factors that govern their target specificity remains incomplete. The issue is further complicated by an often observed lack of correlation between results from model studies and the in vivo activities of antimicrobial peptides.

The interaction between antimicrobial peptides and their target membranes is most often studied using mixtures of unsaturated phospholipids, with headgroup compositions that reflect those of the major lipid classes found in bacterial cytoplasmic membranes. However, bacterial lipid species are more diverse and bacterial cytoplasmic membranes more complex than suggested by these simple model systems. The majority of phospholipids that comprise the single cytoplasmic membrane of Staphylococcus aureus are diacylphosphatidylglycerols (PG) or derived from PG (4). Among these are cardiolipin and lysylphosphatidylglycerol (LPG), where the PG headgroup is esterified to the carboxyterminus of a lysine residue. Monounsaturated palmitoyl and oleoyl chains exist in only negligible amounts in the genus Staphylococcus and are altogether absent from S. aureus (4). In S. aureus, membrane lipids are entirely saturated, with terminally methyl-branched fatty acids functionally replacing the monounsaturated chains found in other organisms (46). The most abundant branched fatty acids found in S. aureus are anteiso (ai) and iso-branched (i), C15 and C17 chains. In S. epidermidis, Bacillus spp., and Streptococcus spp. longer chain fatty acids (≥ C17), normal or iso-branched, are found preferentially in the sn-1 position (710) and preliminary data suggests that this is also true for S. aureus. Shorter (C15) iso- and anteiso-branched chains are more commonly found in the sn-2 position.

The degree of branching and the position of the branch point influences the main phase transition temperature (Tm) of hydrated phospholipid vesicles (1116). Symmetric di-anteiso-branched phosphatidylcholines (PC) with C16 hydrocarbon chains or shorter show a main Tm below 0°C, whereas di-ai17PC melts around 10°C. The transition enthalpies of ai-branched phospholipids are significantly smaller than for their straight-chain equivalents, indicating that ai-branched PC form a more disordered gel-phase than straight-chain PCs. By comparison, di-iso-branched PCs melt at higher temperatures than their anteiso-branched counterparts and their transition enthalpies are comparable to those of straight-chain PCs.

The susceptibility of S. aureus to antimicrobial peptides correlates with the fraction of anteiso-branched in the bacterial cytoplasmic membrane (1720). In methicillin-resistant S. aureus (MRSA), the fraction of anteiso-branched acyl chains is elevated relative to that of susceptible strains and growth of S. aureus in medium containing sublethal concentrations of methicillin or antimicrobial peptides induces an increase in the anteiso-branched fatty acid fraction. Moreover, decreasing the anteiso-branched fatty acid content in S. aureus by the inactivation of a key enzyme in the synthetic pathway has been shown to lead to reduced virulence (21), suggesting a causal link between acyl chain structure and bacterial resistance to antibiotics.

We showed previously that the action of the cytolytic peptide δ-lysin strongly depends on the acyl chain structure of the target membrane in lipid vesicles (22). Specifically, we found that membrane perturbation is inhibited in proportion to the degree of fatty acid unsaturation. We attributed this observation to an entropically unfavorable interaction of the peptide with highly disordered, unsaturated acyl chains. These results suggested that a shift in the lipid acyl chain composition toward a higher fraction of acyl chains with a low Tm should increase bacterial resistance to antimicrobial peptides. Based on these observations, we hypothesized that δ-lysin would also interact less favorably with lipid vesicles composed of anteiso-branched acyl chains than with those composed of straight-chain and iso-branched phospholipids of similar chain length due to the lower Tm of the anteiso-branched variants.

The hypothesis was tested by synthesizing asymmetric saturated PCs that differed only in the type of fatty acid in the sn-2 position: 1-palmitoyl-2-(12-methylmyristoyl)-sn-glycero-3-phosphocholine (16:0-ai15:0PC), 1-palmitoyl-2-(13-methylmyristoyl)-sn-glycero-3-phosphocholine (16:0-i15:0PC), and 1-palmitoyl-2-tridecanoyl-sn-glycero-3-phosphocholine (16:0-13:0PC) (Fig. 1).

Figure 1.

Figure 1

Structures of synthetic lipids. (A) 1-palmitoyl-2-(12-methylmyristoyl)-sn-glycero-3-phosphocholine (16:0-ai15:0PC). (B) 1-palmitoyl-2-(13-methylmyristoyl)-sn-glycero-3-phosphocholine (16:0-i15:0PC). (C) 1-palmitoyl-2-tridecanoyl-sn-glycero-3-phosphocholine (16:0-13:0PC).

To test peptide–lipid interactions as a function of acyl chain branching, we encapsulated the fluorescent dye carboxyfluorescein in lipid vesicles and measured the kinetics of dye efflux induced by δ-lysin. The results were compared with those obtained using 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC). To assess if the synthetic lipids capture the behavior of bacterial lipids, we performed the same experiments using phosphatidylglycerol extracts from S. aureus and S. sciuri cell cultures and compared the peptide-induced dye efflux kinetics with those collected using 1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-(1’-rac-glycerol) (POPG) vesicles. We observed that dye release from lipid vesicles composed of asymmetric, iso-branched phospholipids was generally slower than that from anteiso-branched lipid vesicles; however, the overall effect was minor. Moreover, liposomes composed of synthetic asymmetric branched chain phospholipids were significantly more prone to release content than POPC liposomes or those made from bacterial phospholipid extracts.

METHODS

Chemicals

1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC), 1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-(1’-rac-glycerol) (POPG) and 1-palmitoyl-2-hydroxy-sn-glycero-3-phosphocholine (C16-lyso-PC) were purchased from Avanti Polar Lipids (Alabaster, AL). Carboxyfluorescein (99% pure, lot A015252901) was purchased from ACROS (Morris Plains, NJ). Tridecanoic acid was purchased from MP Biomedicals (Solon, OH), 13-methylmyristic acid, 12-methylmyristic acid, methyl 12-methylmyristate, methyl 13-methylmyristate, and boron trifluoride-methanol (14% solution) were purchased from Sigma-Aldrich (St. Louis, MO). Lipids and fatty acids were tested by TLC and used without further purification. 4-pyrrolidinopyridine (98% pure) was purchased from TCI America (Portland, OR) and purified by recrystallization in hexane prior to use. The purified crystals were stored under argon. 2-(1H-Benzotriazole-1-yl)-1,1,3,3-tetramethyluronium hexafluorophosphate (HBTU) was purchased from Novabiochem (Darmstadt, Germany), analytical thin layer chromatography (TLC) silica plates from Analtech (Newark, DE), flash grade silica (32–63 μ) from Dynamic Adsorbents (Norcross, GA), Molecular sieves 3A from Sigma-Aldrich (St. Louis, MO), and flash grade basic alumina (adsorption 80–200 mesh) from Fisher Scientific (Pittsburgh, PA). Chlorinated solvents and methanol (High performance Liquid Chromatography/American Chemical Society grade) were purchased from Burdick & Jackson (Muskegon, MI). Hexanes and trifluoroacetic acid (99% pure) were purchased from Mallinckrodt Chemicals (Phillipsburg, NJ). BBL Mueller Hinton (MH) Broth was purchased from Becton, Dickinson and Comapny (Sparks, MD), and celite 545 from Fisher Scientific (Fair Lawn, NJ). Bacterial cultures were from ATCC (American Type Culture Collection, Manassas, VA). δ-Lysin was a gift from Dr. Birkbeck, University of Glasgow. Stock solutions of MasX and CecA were prepared by dissolving lyophilized peptide in deionized water/ ethanol, 1:1 (v/v) (AAPER Alcohol and Chemical Co., Shelbyville, KY). Stock solutions of δ-lysin were prepared in deionized water, pH ~ 3. Peptide stock solutions were stored at −20 C and kept on ice during experiments. Peptide concentration of the stock solutions were determined precisely by measuring the absorbance at 280nm, and using a molar extinction coefficient of tryptophan of 5600 M−1cm−1.

Lipid synthesis

Asymmetric lipids were synthesized by coupling the desired fatty acid to the sn-2 position of C16-lyso-PC (manuscript in preparation). Briefly, CH3Cl solutions of fatty acid and HBTU were combined in a 1:0.8 molar ratio in a dry round bottom flask. C16-lyso PC (in a molar ratio of 0.3:1 lysoPC to fatty acid), 4-pyrrolidinopyridine and TFA were combined in a second flask and slowly added to the fatty acid/HBTU mixture. The reaction mixture was heated to 40°C and monitored by TLC on alumina plates in CH2Cl2/methanol/water 80:20:2. Reaction yield was judged to be ≥ 90% by TLC. The reaction was stopped by the addition of a 1:1 mixture of CH3Cl/methanol and concentrated by rotary evaporation. The sample was dried on a Welch Duo-Seal high vacuum pump (Niles, IL), dissolved in a minimal amount of CH2Cl2/methanol 9:1, and purified by flash column chromatography (FCC) on a basic alumina column.

Isolation of staphylococcal membrane lipids

Bacterial cultures were obtained from the American Type Culture Collection (ATCC, Manassas, VA). Staphylococcus aureus subsp. aureus Rosenbach ATCC 12600 or Staphylococcus sciuri subsp. sciuri ATCC 29062 were cultured in 2 L MH broth for 24 hours at 37 °C. Cells were harvested by centrifugation and resuspended in methanol. CH2Cl2 was added to the suspension to a final ratio of 1:2 CH2Cl2:methanol. The mixture was sonicated for 5 min. in a water bath sonicator and stored for 12–24 hours at 4 °C. The suspension was filtered into a round bottom flask through a celite pad in a 60 mL, medium-porosity Büchner funnel. The filtrate was reduced to dryness in a rotary evaporator, dried under high vacuum, and redissolved in approximately 2 mL 2:1 CH2Cl2/methanol. This crude lipid extract was separated into its constituent lipid classes by FCC on silica using a CH2Cl2/methanol/water gradient. Fractions were analyzed by TLC and phospholipids visualized with a modified Dittmer-Lester reagent (23, 24). Pure phosphatidylglycerol fractions were combined, reduced to dryness in a rotary evaporator and stored in CHCl3 at −20°C. Lipid concentrations were determined by the Bartlett phosphate method (25), modified as previously described (26).

Fatty acid analysis of bacterial membranes

Approximately 20 mg of a bacterial lipid extract was saponified in 1 mL 0.5 M NaOH-methanol at 70–100°C. The free fatty acids were converted to their methyl esters (FAME) by refluxing in 1.5 mL BF3-methanol for 30 minutes at 70–100°C (27). FAME were extracted in hexane and passed through a mini column made from a pasteur pipet, packed with 32–63 µ silica gel, to remove impurities, and concentrated for analysis by GC-FID. FAME were analyzed on a Hewlett Packard 6890 series gas chromatograph (Agilent Technologies, Santa Clara, CA) using an Agilent 19091J-413 HP-5, 30 m column. The samples were applied to the column using a split ratio of 10:1 and a flow rate of 1.0 mL/min. The initial GC oven temperature of 170°C was held for 2 minutes, ramped at 3°C/min to 200°C, and then increased at 15°C/min to a final temperature of 260°C, which was maintained for 2 minutes. Fatty acids were identified by the comparison of retention times of peaks in the sample with those of commercially available standards. Percent fatty acid values were calculated by integrating peak areas in the chromatogram.

NMR spectroscopy

Successful addition of a fatty acid at the sn-2 position of C16-Lyso-PC was determined by 1H NMR using a 400Mhz or 600Mhz Bruker Spectrospin NMR spectrometer (Bruker Corporation, Billerica, MA). NMR samples were dissolved in 10% deuterated methanol in CDCl3. The signal in the region of δH 2.2–2.4 ppm was assigned to the methylene protons located on the carbon α to the fatty acid carbonyl group. The signal change from a triplet in C16-Lyso-PC to a doublet of triplets in the diacyl-PC is indicative of the successful addition of a fatty acid at the sn-2 position. 31P NMR was performed to ensure that no residual C16-Lyso-PC was present in the sample.

Preparation of large unilamellar vesicles

Large unilamellar vesicles (LUVs) were prepared by mixing the lipids in chloroform in a round-bottom flask. For vesicles containing 7MC-POPE, the probes were added to the lipid in chloroform solution at a final probe concentration of 2 mol%. The solvent was rapidly evaporated using a rotary evaporator (Büchi R-3000, Flawil, Switzerland) at 60°C. The lipid film was then placed under vacuum for 4 hours and hydrated by the addition of buffer containing 20 mM MOPS, pH 7.5, 0.1 mM EGTA, 0.02% NaN3, and 100 mM KCl or appropriately modified as indicated below. The suspension of multilamellar vesicles was subjected to five freeze-thaw cycles. The suspension was then extruded 10 × through two stacked polycarbonate filters of 0.1 µm pore size (Nuclepore, Whatman, Florham, NJ), using a water-jacketed high pressure extruder (Lipex Biomembranes, Inc., Vancouver, Canada) at room temperature. Lipid concentrations were assayed as previously described (26).

Peptide-induced dye release from lipid vesicles

LUVs for carboxyfluorescein (CF) efflux kinetics measurements were prepared by hydrating the dried lipid film with CF-containing buffer (20 mM MOPS pH 7.5, 0.1 mM EGTA, and 0.02% NaN3, 50 mM CF) to give a final lipid concentration of 5 mM. Following extrusion, CF-containing LUVs were passed through a Sephadex-G25 column to separate the dye in the external buffer from the vesicles. The suspension was diluted in buffer to the desired lipid concentration and used for fluorescence measurements. The buffer used was 20 mM MOPS pH 7.5, containing 100 mM KCl, 0.1 mM EGTA, and 0.02% NaN3, which has the same osmolarity as the CF-containing buffer. The kinetics of carboxyfluorescein efflux were recorded in an Applied Photophysics SX.18MV stopped-flow fluorimeter. CF was excited at 470 nm and the emission recorded through a GG 530 long-pass filter (Edmund Industrial Optics).

Calculation of average relaxation times

The curves of carboxyfluorescein release as a function of time were characterized by a mean relaxation time (τ), as described before (28). Briefly, the mean relaxation time is obtained from the integral (29, 30),

τ=0tf(t)dt0f(t)dt, (1)

where

f(t)=dF(t)dt (2)

and F(t) is the experimental curve of normalized fluorescence increase as a function of time. This curve increases as CF is released, until it essentially reaches a plateau (see Fig. 3). The time-derivative of F(t), f(t) behaves as the probability density function (29, 30). For example, for a multi-exponential decay τ is the weighted average of the relaxation times of each exponential function. If necessary, the curves were smoothened prior to numerical differentiation as described before (28), to avoid errors due to experimental noise.

Figure 3.

Figure 3

Carboxyfluorescein efflux from lipid vesicles induced by the cytolytic peptide δ-lysin as a function of lipid composition. 16:0-i15:0PC, blue trace; 16:0-13:0:0PC, green trace; 16:0-ai15:0PC, red trace; POPC, black trace. Peptide concentration was 0.5 µM and lipid concentration, 200 µM.

RESULTS & DISCUSSION

We used the cytolytic peptide δ-lysin, a 26-residue peptide that forms an amphipathic α-helix when bound to bilayer membranes, to probe the effect of lipid acyl chain structure on peptide activity. δ-Lysin is one of many toxins secreted by S. aureus and extremely efficient in permeabilizing the cell membranes of a wide variety of organisms and lipid vesicles with binding constants between 105 and 106 M−1 (3133). We showed previously that the mean time constant, τ, of dye efflux (Eq. 1) provides a model-independent and robust observable that is directly related to changes in bulk bilayer properties (22). Here, we postulated that the kinetics of peptide-induced dye release from lipid vesicles should depend on the type of acyl chain branching of the lipids comprising the vesicles. Specifically, we proposed that peptide–lipid interactions would be entropically unfavorable in systems composed of lipids with low phase transition temperatures. Thus, when comparing a series of lipids, dye release should occur slowest in vesicles made from lipids with the lowest Tm, if the hypothesis is correct.

POPC undergoes a gel-to-liquid phase transition at −3.5±1.0°C (34). We show here that aqueous lipid dispersions of 16:0-i15:0PC and 16:0-13:0PC undergo a cooperative phase transition with a Tm of 15.0°C for 16:0-i15:0PC and 18.4°C for 16:0-13:0PC (Fig. 2).

Figure 2.

Figure 2

Excess heat capacity curves of 16:0-i15:0PC and 16:0-13:0PC LUVs. (A) 16:0-i15:0PC, Tm = 15.0 ± 1.0°C, (B) 16:0-13:0PC, Tm = 18.4 ± 1.0°C. Both curves are the averages of two heating scans collected at a rate of 0.2°C/min, separated by a cooling scan at 0.2°C/min.

The main phase transition of the anteiso-branched variant 16:0-ai15:0PC occurs below 0°C (data not shown). The transition profile of 16:0-i15:0PC shows a single phase transition indicative of a well packed gel phase with a transition enthalpy ΔH, of 6.0 kcal/mol, comparable in magnitude to that of POPC (34). The overall width of the phase transition for 16:0-13:0PC is slightly larger than that for 16:0-i15:0PC and the corresponding ΔH is 3.7 kcal/mol. By comparison to the transition profile of 16:0-i15:0PC, the endotherm associated with the melting transition in 16:0-13:0PC vesicles appears to be a composite of several separate transitions, which is compatible with a partially interdigitated bilayer and multiple lipid packing arrangement in the gel phase (34, 35). Whole S. aureus membranes have been shown to exhibit a broad phase transition that is complete just below the growth temperature of the cell culture (36).

We observed that in the absence of peptide, LUVs composed of 16:0-13:0PC released encapsulated dye within tens of minutes (data not shown). To be able to measure peptide-induced dye release, 16:0-13:0PC LUVs were assayed immediately after the vesicles had been separated from the external dye solution. Nevertheless, signal strength was small and the experimental noise high, because a large fraction of the encapsulated dye had leaked from the vesicle lumen by the time peptide was added to the suspension (Fig. 3, green trace).

Encapsulated dye also leaked from 16:0-i15:0PC vesicles, but the process occurred on the order of hours rather than minutes, as it did for 16:0-13:0PC LUVs. Following the addition of τ-lysin, the suspension of 16:0-i15:0PC LUVs released dye rapidly (τ < 1s, Fig. 3, blue trace). δ-Lysin also acted very rapidly on 16:0-ai15:0PC vesicles, releasing content with a τ ≈ 2s, under the same conditions (Fig. 3, red trace). It is an observation of note that of the three lipids synthesized here, 16:0-ai15:0PC produced lipid vesicles that were much more tightly sealed than those composed of 16:0-13:0PC or 16:0-i15:0PC. Dye encapsulated 16:0-ai15:0PC LUVs retained dye for at least a day; yet, all three lipid species produce LUVs that are significantly more permeable to encapsulated dye than those composed of POPC, which retain dye for weeks. Peptide-induced dye release from of POPC vesicles, though still rapid, occurs with an average τ ≈ 7s (Fig. 3, black trace), which is an order of magnitude larger than that measured from 16:0-i15:0PC LUVs at a comparable lipid concentration.

A closer look at the kinetics of dye release as a function of lipid concentration shows that for LUVs composed 16:0-13:0PC and 16:0-i15:0PC, dye release occurs with kinetics that depend little on lipid concentration (Fig. 4). Clearly, these lipids produce vesicles that are intrinsically permeable to carboxyfluorescein and very susceptible to structural perturbations, including those induced by membrane-active peptides. The anteiso-branched variant 16:0-ai15:0PC, on the other hand, produces LUVs that qualitatively behave like those based on POPC with respect to peptide-induced dye release in that the kinetics of dye release become slower as the lipid concentration increases (Fig. 4). Nevertheless, at high lipid concentrations, dye release occurs significantly faster from 16:0-ai15:0PC vesicles than from POPC vesicles at the same lipid concentration (Fig. 4). This observation suggests that formation of the state responsible for dye release, most likely a small peptide oligomer (26), is favored in 16:0-ai15:0PC over POPC.

Figure 4.

Figure 4

Average kinetics (τ) of peptide-induced carboxyfluorescein efflux from lipid vesicles as a function of lipid concentration. 16:0-i15:0PC, blue symbols; 16:0-13:0:0PC, green symbols; 16:0-ai15:0PC, red symbols; POPC, black symbols. Solid lines are drawn to aid the eye. δ-Lysin concentration was 0.5 µM in all experiments.

LUVs made from bacterial lipid extracts behave markedly different compared to those based on the three types of synthetic phospholipids described above. PG extracts from S. aureus and S. sciuri produce lipid vesicles that retain encapsulated dye for days, similar to those prepared from POPG. δ-Lysin binds readily to PG vesicles and releases dye with kinetics that are generally slower than those observed in PC dispersions at the same lipid concentration (Figs. 3 and 5).

Figure 5.

Figure 5

Carboxyfluorescein efflux from POPG and bacterial lipid LUVs induced by δ-lysin. POPG, black line; S. aureus PG extract, red line; S. sciuri PG extract, blue line. Peptide concentration was 0.5 µM and lipid concentration, 200 µM.

PG extracts from S. sciuri are enriched in iso- over anteiso-branched fatty acids (Table 1). If the original hypothesis were correct and peptide-lipid interactions were indeed favored in bilayers enriched in iso-branched fatty acids, dye release should occur more rapidly from LUVs made from S. sciuri PG extracts than from those based on S. aureus extracts, at the same lipid concentration. However, within experimental error, dye release occurs with roughly the same kinetics from S. aureus, S. sciuri, and POPG lipid dispersions (Fig. 5).

Table 1.

Percent fatty acid composition of the major phosphatidylglycerol fractions isolated from S.aureus and S. sciuri membrane lipids. Palmitic, stearic, 17-methyl stearic, 19-methyl stearic, and arachidic acid make up the remaining fractions.

Fatty acid S. aureus
%
S. sciuri
%
13-methyl myristic acid (i15:0) 4.5 43.7
12-methyl myristic acid (ai15:0) 47.4 30.7
15-methyl palmitic acid (i17:0) 5.4 10.9
14-methyl palmitic acid (ai17:0) 28.6 9.8

Only at lipid concentrations > 200µM do the kinetics of dye release from S. aureus lipid vesicles become significantly slower than from those based on S. sciuri lipid extracts (Fig. 6). We pointed out previously that the bacterial PG extracts still contained a significant fraction of lysine-modified PG (Lys-PG), which co-elutes with unmodified PG during purification under the chosen conditions (37). The presence of 10–20 mol% Lys-PG in mixtures with PG was found to lead to a stabilization of the membrane, rendering the membrane less susceptible to peptide-induced perturbations (37), presumably due to a lower headgroup repulsion in PG/Lys-PG mixtures compared with that in pure PG bilayers.

Figure 6.

Figure 6

Average kinetics (τ) of peptide-induced carboxyfluorescein efflux from POPG and bacterial lipid vesicles as a function of lipid concentration. POPG, black symbols; S. aureus PG extract, red symbols; S. sciuri PG extract, blue symbols. Solid lines are drawn to aid the eye. δ-Lysin concentration was 0.5 µM in all experiment.

Thus, the more complex mixture of lipids found in bacterial membranes appears to provide a hydrophobic barrier better suited to protect against the uncontrolled passage of small molecules. However, scanning electron microscopy images obtained from bacterial membranes that have been cooled to low temperatures support the notion that bilayers composed mostly of saturated branched lipids behave fundamentally differently from those composed of unsaturated lipids (36). When S. aureus whole membranes were cooled to below the phase transition (−10°C), no aggregation of proteins in the plane of the membrane was observed, whereas E. coli membranes, which contain unsaturated lipids, showed significant protein aggregation when cooled to low temperatures. This observation suggests that E. coli lipids form a well-packed gel-phase below the Tm from which proteins are excluded, in contrast to the S. aureus membranes, which show sufficient lateral compressibility even in the gel phase to prevent membrane protein aggregation.

We had originally hypothesized that peptide–lipid interactions would be disfavored in systems composed of lipids with low gel–fluid phase transition temperatures. In summary, we could show that asymmetric phospholipids containing iso-branched fatty acids indeed facilitate the formation of peptide-induced membrane defects when compared to bilayers comprised of the low-temperature melting anteiso-branched isomer, as we had hypothesized. We attribute this to the formation of peptide oligomers that is somewhat more favorable in iso-branched than in anteiso-branched lipids. The magnitude of the observed effect, however, depends strongly on the peptide-to-lipid ratio and becomes negligible at peptide-to-lipid ratio ≤ 1:400 (Fig. 6). Even at a peptide-to-lipid ratio of 1:600, the average τ of dye release is only increased by a factor of 5 in anteiso-relative to iso-branched lipids.

Thus, the magnitude of the effect is so small that the increase in the fraction of anteiso-branched fatty acids in antibiotic-resistant strains of S. aureus is unlikely to be responsible for the observed increased antibiotic resistance. Moreover, the correlation between Tm and ease of peptide-induced defect formation does not hold true in general. δ-Lysin-induced dye release from POPC vesicles (Tm = −3.5°C) is slower at every lipid concentration tested, than that from either 16:0-i15:0PC or 16:0-ai15:0PC vesicles (Fig. 4). Hence, the Tm of an aqueous lipid dispersion is a poor predictor of peptide activity in a lipid model system. However, there is a clear correlation between the overall integrity of the bilayer, as measured qualitatively by the ability to retain encapsulated dye, and its sensitivity to the action of a membrane-active peptide. This is especially evident in bilayers composed of 16:0-13:0PC that are unable to retain content for a period of time that is significant on a biological scale. Thus, bacterial membranes that rely on branched rather than unsaturated lipids to ensure a fluid-phase bilayer at physiological temperatures must include other membrane components to improve packing and integrity of the hydrophobic barrier.

Highlights.

  • Saturated branched phospholipids of the type that occur in bacterial membranes have a main phase transition below room temperature.

  • Lipid vesicles composed of branched phospholipids are significantly more susceptible to membrane-active peptides than those made from unsaturated lipids.

  • Lipid vesicles composed of synthetic branched phospholipids do not retain encapsulated dye for extended periods of time.

  • Both anteiso- and iso-branched phospholipids facilitate peptide-induced membrance perturbations compared to unsaturated phospholipids.

  • Membrane phospholipids extracted from S.aureus give rise to liposomes that are more resistant than those made from pure synthetic lipids.

Acknowledgment

This work was supported by National Institutes of Health grant AI088567.

Footnotes

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References

  • 1.Nickel W. The mystery of nonclassical protein secretion. A current view on cargo proteins and potential export routes. Eur. J. Biochem. 2003;270 doi: 10.1046/j.1432-1033.2003.03577.x. 21092119. [DOI] [PubMed] [Google Scholar]
  • 2.Tossi A, Sandri L, Giangaspero A. Amphipathic, alpha-helical antimicrobial peptides. Biopolymers. 2000;55:4–30. doi: 10.1002/1097-0282(2000)55:1<4::AID-BIP30>3.0.CO;2-M. [DOI] [PubMed] [Google Scholar]
  • 3.Almeida PF, Pokorny A. Mechanisms of antimicrobial, cytolytic, and cell-penetrating peptides: from kinetics to thermodynamics. Biochemistry. 2009;48:8083–8093. doi: 10.1021/bi900914g. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 4.OLeary WM, Wilkinson SG. Gram-positive bacteria. In: Ratledge C, Wilkinson SG, editors. Microbial Lipids. Vol. 1. San Diego: Academic Press; 1988. pp. 117–201. [Google Scholar]
  • 5.Ward JB, Perkins HR. The chemical composition of the membranes of protoplasts and L-forms of Staphylococcus aureus. Biochem. J. 1968;106:391–400. doi: 10.1042/bj1060391. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 6.ODonnell AG, Nahaie MR, Goodfellow M, Minnikin DE, Hajek V. Numerical analysis of fatty acid profiles in the identification of staphylococci. J. Gen. Microbiol. 1985;131:2023–2033. doi: 10.1099/00221287-131-8-2023. [DOI] [PubMed] [Google Scholar]
  • 7.Kaneda T. Positional preference of fatty acids in phospholipids of Bacillus cereus and its relation to growth temperature. Biochim. Biophys. Acta. 1972;280:297–305. doi: 10.1016/0005-2760(72)90097-5. [DOI] [PubMed] [Google Scholar]
  • 8.Kaneda T. Positional distribution of fatty acids in phospholipids from Bacillus subtilis. Biochim. Biophys. Acta. 1972;270:32–39. doi: 10.1016/0005-2760(72)90174-9. [DOI] [PubMed] [Google Scholar]
  • 9.Komaratat P, Kates M. The lipid composition of a halotolerant species of Staphylococcus epidermidis. Biochim. Biophys. Acta. 1975;398:464–484. doi: 10.1016/0005-2760(75)90197-6. [DOI] [PubMed] [Google Scholar]
  • 10.Fischer W. The polar lipids of group B Streptococci. II. Composition and positional distribution of fatty acids. Biochim. Biophys. Acta. 1977;487:89–104. doi: 10.1016/0005-2760(77)90046-7. [DOI] [PubMed] [Google Scholar]
  • 11.Silvius JR, McElhaney RN. Effects of phospholipid acyl chain structure on physical properties: I. Isobranched phosphatidylcholines. Chem. Phys. Lipids. 1979;24:287–296. [Google Scholar]
  • 12.Silvius JR, McElhaney RN. Effects of phospholipid acyl chain structure on thermotropic phase properties. 3. Phosphatidylcholines with (), and ()-anteiso acyl chains. Chem. Phys. Lipids. 1980;26:67–77. [Google Scholar]
  • 13.Silvius JR, Lyons M, Yeagle PL, OLeary TJ. Thermotropic properties of bilayers containing branched-chain phospholipids. Calorimetric, Raman, and 31P NMR studies. Biochemistry. 1985;24:5388–5395. doi: 10.1021/bi00341a017. [DOI] [PubMed] [Google Scholar]
  • 14.Mantsch HH, Madec C, Lewis RN, McElhaney RN. Thermotropic phase behavior of model membranes composed of phosphatidylcholines containing iso-branched fatty acids. 2. Infrared and 31P NMR spectroscopic studies. Biochemistry. 1985;24:2440–2446. doi: 10.1021/bi00331a008. [DOI] [PubMed] [Google Scholar]
  • 15.Mantsch HH, Madec C, Lewis RN, McElhaney RN. Thermotropic phase behavior of model membranes composed of phosphatidylcholines containing dl-methyl anteisobranched fatty acids. 2. An infrared spectroscopy study. Biochemistry. 1987;26:4045–4049. doi: 10.1021/bi00387a045. [DOI] [PubMed] [Google Scholar]
  • 16.Lewis RN, Sykes BD, McElhaney RN. Thermotropic phase behavior of model membranes composed of phosphatidylcholines containing dl-methyl anteisobranched fatty acids. 1. Differential scanning calorimetric and 31P NMR spectroscopic studies. Biochemistry. 1987;26:4036–4044. doi: 10.1021/bi00387a044. [DOI] [PubMed] [Google Scholar]
  • 17.Rozgonyi F, Biacs P, Kiss J, Szitha KR, Andirk o I. The effect of methicillin on the fatty acid composition of total polar lipid in methicillin resistant Staphylococcus aureus. Acta Microbiol. Hung. 1990;37:179–186. [PubMed] [Google Scholar]
  • 18.Mukhopadhyay K, Whitmire W, Xiong YQ, Molden J, Jones T, Peschel A, Staubitz P, Adler-Moore J, McNamara PJ, Proctor RA, Yeaman MR, Bayer AS. In vitro susceptibility of Staphylococcus aureus to thrombin-induced platelet microbicidal protein-1 (tPMP-1) is influenced by cell membrane phospholipid composition and asymmetry. Microbiology. 2007;153:1187–1197. doi: 10.1099/mic.0.2006/003111-0. [DOI] [PubMed] [Google Scholar]
  • 19.Jones T, Yeaman MR, Sakoulas G, Yang SJ, Proctor RA, Sahl HG, Schrenzel J, Xiong YQ, Bayer AS. Failures in clinical treatment of Staphylococcus aureus Infection with daptomycin are associated with alterations in surface charge, membrane phospholipid asymmetry, and drug binding. Antimicrob. Agents Chemother. 2008;52:269–278. doi: 10.1128/AAC.00719-07. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 20.Bayer AS, Schneider T, Sahl HG. Mechanisms of daptomycin resistance in Staphylococcus aureus: role of the cell membrane and cell wall. Ann N Y Acad Sci. 2013;1277:139–158. doi: 10.1111/j.1749-6632.2012.06819.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 21.Singh VK, Hattangady DS, Giotis ES, Singh AK, Chamberlain NR, Stuart MK, Wilkinson BJ. Insertional inactivation of branched-chain alpha-keto acid dehydrogenase in Staphylococcus aureus leads to decreased branched-chain membrane fatty acid content and increased susceptibility to certain stresses. Appl. Environ. Microbiol. 2008;74:5882–5890. doi: 10.1128/AEM.00882-08. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 22.Pokorny A, Kilelee EM, Wu D, Almeida PF. The activity of the amphipathic peptide delta-lysin correlates with phospholipid acyl chain structure and bilayer elastic properties. Biophys J. 2008;95:4748–4755. doi: 10.1529/biophysj.108.138701. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 23.Dittmer JC, Lester RL. A simple, specific spray for the detection of phospholipids on thin layer chromatograms. J. Lipid Res. 1964;5:126–127. [PubMed] [Google Scholar]
  • 24.Ryu EK, MacCoss M. Modification of the Dittmer-Lester reagent for the detection of phospholipid derivatives on thin-layer chromatograms. J. Lipid Res. 1979;20:561–563. [PubMed] [Google Scholar]
  • 25.Bartlett GR. Phosphorous assay in column chromatography. J. Biol. Chem. 1959;234 466468. [PubMed] [Google Scholar]
  • 26.Pokorny A, Birkbeck TH, Almeida PFF. Mechanism and kinetics of deltalysin interaction with phospholipid vesicles. Biochemistry. 2002;41 doi: 10.1021/bi020244r. 1104411056. [DOI] [PubMed] [Google Scholar]
  • 27.Van Wijngaarden D. Modified rapid preparation of fatty acid esters from lipids for gas chromatographic analysis. Anal.Chem. 1967;39 848849. [Google Scholar]
  • 28.Pokorny A, Almeida PFF. Permeabilization of raft-containing lipid vesicles by δ-lysin: a mechanism for cell sensitivity to cytotoxic peptides. Biochemistry. 2005;44:9538–9544. doi: 10.1021/bi0506371. [DOI] [PubMed] [Google Scholar]
  • 29.Colquhoun David. Lectures on Biostatistics. Oxford, UK: Clarendon Press; 1971. Print. [Google Scholar]
  • 30.Colquhoun D, Hawkes AG. The interpretation of single channel recordings. In: Ogden D, editor. Microelectrode Techniques. The Plymouth Workshop Handbook. 2nd Ed. Cambridge, UK: The Company of Biologists Ltd.; 1987. pp. 141–188. 1994. [Google Scholar]
  • 31.Kreger AS, Kim K-S, Zaboretzky F, Bernheimer AW. Purification and properties of staphylococcal delta hemolysin. Infect. Immun. 1971;3:449–465. doi: 10.1128/iai.3.3.449-465.1971. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 32.Thiaudiere E, Siffert O, Talbot JC, Bolard J, Alouf JE, Dufourcq J. The amphiphilic alpha-helix concept. Consequences on the structure of staphylococcal δ-toxin in solution and bound to lipids. Eur. J. Biochem. 1991;195:203–213. doi: 10.1111/j.1432-1033.1991.tb15696.x. [DOI] [PubMed] [Google Scholar]
  • 33.Pokorny A, Almeida PF. Kinetics of Dye Efflux and Lipid Flip-Flop Induced by δ-Lysin in Phosphatidylcholine Vesicles and the Mechanism of Graded Release by Amphipathic, α-Helical Peptides. Biochemistry. 2004;43:8846–8857. doi: 10.1021/bi0497087. [DOI] [PubMed] [Google Scholar]
  • 34.Marsh Derek. Handbook of Lipid Bilayers. Boca Raton, FL: CRC Press; 2013. Print. [Google Scholar]
  • 35.Mason JT, Huang C, Biltonen RL. Calorimetric investigations of saturated mixed-chain phosphatidylcholine bilayer dispersions. Biochemistry. 1981;20:6086–6092. doi: 10.1021/bi00524a026. [DOI] [PubMed] [Google Scholar]
  • 36.Haest, C.W, Verkleij AJ, De Gier J, Scheek R, Ververgaert PH, Van Deenen LL. The effect of lipid phase transitions on the architecture of bacterial membranes. Biochim. Biophys. Acta. 1974;356:17–26. doi: 10.1016/0005-2736(74)90290-9. [DOI] [PubMed] [Google Scholar]
  • 37.Cox E, Michalak A, Pagentine S, Seaton P, Pokorny A. Lysylated phospholipids stabilize models of bacterial lipid bilayers and protect against antimicrobial peptides. Biochim. Biophys. Acta. 2014;1838:2198–2204. doi: 10.1016/j.bbamem.2014.04.018. [DOI] [PMC free article] [PubMed] [Google Scholar]

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