Abstract
We report here a detailed analysis of Mg2+ ion effects on furin hydrolysis of fluorescent resonance energy transfer (FRET) decapeptide substrates derived from canonical R-X-K/R-R furin cleavage motifs within certain viral envelope glycoproteins and eukaryotic proproteins. Selective activation of furin by Mg2+ ions was observed using virus-derived sequences. Cooperativity between furin subsites was also observed during MgCl2 activation. Furin hydrolysis of the peptides Abz-SRRHKR↓FAGV-Q-EDDnp (from measles virus fusion protein Fo), and Abz-RERRRKKR↓GLFG-Q-EDDnp (from Asian avian influenza A, H5N1) was activated between 60- and 80-fold by MgCl2. It appears that virus envelope glycoprotein mutations have been selected to increase their susceptibility to furin within cells, a location where Mg2+ is present in adequate concentrations for activation. Both the pH profile of furin and its intrinsic fluorescence were modified by Mg2+ ions, which bind to furin with a Kd of 1.1 mM.
Keywords: Protease, peptidase, magnesium, fluorescence
Introduction
Furin (EC 3.4.21.75, MEROPS clan SB, family S8) is a Ca2+-dependent serine endoprotease that cleaves protein precursors with a specificity that follows the multiple basic motif R-X-K/R-R (1), corresponding to the substrate positions P4 to P1 (nomenclature of Schechter and Berger) (2). The S1 and S4 furin subsites exhibit a stringent specificity for R while the S2 preference is for K or R (3,4,5). Furin is present in the constitutive secretory pathway but also recycles along the trans-Golgi network (TGN), the cell surface and the endosomes. Furin processes soluble and membrane–bound precursors of many endogenous and secreted proteins, and is also involved in the processing of virus envelope glycoproteins, in the activation of several bacterial toxins, and in pathologies such as cancer and neurodegenerative diseases (for reviews, see 6,7,8,9,10,11). Furin requirements for efficient substrate hydrolysis depend not only on the well-established motif R-X-K/R-R but also on combinations of amino acids at P5, P6, P′1, P′2 and P′3 substrate positions, and on the presence of potassium ions (K+), which activate the enzyme (12).
Measles virus infectivity in cultured cells has been reported to be increased by 200-fold in the presence of MgSO4 (13). A similar effect for magnesium was reported for dengue virus in mammalian cell culture (14). Magnesium (Mg2+) is the second most abundant intracellular ion after K+; the free cytosolic Mg2+ concentration is about 1 to 3 mM (13,15,16) and is strictly controlled by specific transporters (reviewed by 17). In the present paper we report a detailed analysis of Mg2+ effects on furin activity using fluorescent resonance energy transfer (FRET) decapeptides derived from sequences that span the furin cleavage sites of viral envelope glycoprotein and eukaryotic proproteins. The virulence of influenza virus depends on its capacity to invade host cells, known to require haemagglutinin processing by a host proteinase; furin is the most accepted candidate enzyme for this processing event (for reviews 18,19). We here provide a detailed analysis of furin hydrolysis of peptides derived from H5N1 influenza hemagglutinin (HA). In order to evaluate whether Mg2+ can induce structural modifications in furin, the effects of Mg2+ on the pH-profiles of furin hydrolytic activity and on the intrinsic fluorescence were also examined.
Materials and methods
Enzymes
Recombinant human furin was expressed and purified as previously described (20) and the molar concentration of active enzyme was determined by active site titration with the decanoyl-RVKR-CMK inhibitor in 10 mM MES, 1 mM CaCl2, pH 7.0 and the substrate Abz-GIRRKRSVSHQ-EDDnp. Secreted soluble Kex2 (ssKex2) was obtained from S. cerevisiae; this secreted form lacks the C-terminal tail and permits the production of enzyme in quantity for studies of specificity (21). Kex2 was purified from the culture media of the yeast strain mutant S. cerevisiae AFY490 transformed with the plasmid CB023-pG5KEX2ΔC3 and the gene URA3, which permits the cell division in the presence of uracil in the culture media. Kex2 was purified on a DEAE-Sepharose column (20 mL of resin). The resin was washed with 40mM Bis-tris buffer containing 10% Glycerol (v/v) at 4°C and the enzyme eluted in the same buffer containing 200 mM NaCl, concentrated in by Amicon ultrafiltration and stored at −80°C until used.
Peptides
All peptides were obtained by the solid-phase peptide synthesis strategy as previously described (22) using the Fmoc-procedure in an automated bench-top simultaneous multiple solid-phase peptide synthesizer (PSSM 8 system from Shimadzu, Tokyo, Japan). Details of purification and characterization have been reported earlier (12). Stock solutions of peptides were prepared in DMF and the concentrations were measured spectrophotometrically using the molar extinction coefficient of 17,300 M−1cm−1 at 365nm.
Kinetic measurements
The FRET peptides were assayed in 10 mM MES, 1 mM CaCl2 and pH 7.0, using a HITACHI F-2500 spectrofluorimeter, at 37°C. The enzymes were pre-incubated in the assay buffer for 3 min before the addition of substrate. Fluorescence changes were monitored continuously at λex=320 nm and λem= 420 nm. When fluorogenic peptidyl-MCA substrates were used, the condition was changed to λex = 380 and λem = 460 nm. The enzyme concentrations for initial rate determinations were chosen at a level intended to hydrolyze less than 5% of the amount of added substrate over the time course of data collection. The slope of the generated fluorescence signal was converted into micromoles of substrate hydrolyzed per minute based on a calibration curve obtained from the complete hydrolysis of each peptide. For each peptide the concentrations of the substrates for determination of their kinetic parameters were in the range of two times higher and lower of the obtained Km value for furin hydrolysis. The kinetic parameters Km and kcat were calculated by non-linear regression using Grafit® software (Erithacus Software, Horley, Surrey, U.K.). Errors were less than 5% for each of the kinetic parameters obtained.
Each peptide product resulting from substrate hydrolysis was detected by its UV absorption at 220 nm and its molecular weight was determined by LC/MS using an LCMS-2010 equipped with a ESI-probe (Shimadzu, Japan) connected to the HPLC after the UV-detector. The HPLC conditions were: Ultrasphere C18 column (5 μm, 4.6×250 mm) which was eluted with the solvent systems A (H3PO4/water, 1:1000) and B (ACN/water/H3PO4, 900:100:1) at a flow rate of 0.8 ml/min and a 0–80% gradient of solvent B1 for 60 min.
Effects of MgCl2 and pH on furin catalytic activity
The influence of MgCl2 on the catalytic activity of human furin was tested in a concentration range of 1–100 mM; we also examined the effects of NaCl up to 100 mM under similar conditions. We measured the initial velocity of hydrolysis using 4 μM of the FRET substrates in 10 mM of MES buffer, 1 mM CaCl2 at 37°C and pH 7.0.
The pH dependence of the various rate constants was measured at 37°C in a four-component buffer with constant ionic strength, comprised of 25 mM for acetic acid, MES and glycine and adjusted to the required pHs by the addition of 1M HCl or 1 M NaOH. The reaction was performed by assessing the Vmax of the hydrolysis of substrates in the presence and absence of 5 mM MgCl2. The enzyme was pre-incubated in buffer for about 2 minutes before starting to collect data. All the experiments were made under Vmax rate constants where the substrate concentration was 3 times higher than its Km. The values of Vmax were fitted to equation 1 with the Grafit 5.0 software to theoretical curve for the bell-shaped pH-rate profiles using nonlinear regression.
| (Eq. 1) |
where, Vmax stands for the pH-independent maximum rate constant and K1 and K2 are the dissociation constants of the catalytically competent base and acid, respectively.
Intrinsic fluorescence assays
The intrinsic fluorescence of the furin-containing solutions was obtained in a Hitachi-F2500 spectrofluorimeter with the excitation wavelength set at 280 nm (5 nm slit) and the emission scanned in the range of 300–400 nm (5 nm slit). The measurements were performed at 37°C, in 10 mM MES-NaOH buffer at pH 7.0; in the presence and absence of 1 mM CaCl2 and 1 to 50 mM MgCl2.
Results
Effects of Mg2+ on the hydrolysis of Abz-SRRHKRFAGV-Q-EDDnp by furin
The FRET peptide Abz-SRRHKR↓FAGV-Q-EDDnp contains the sequence of the Fo measles virus envelope glycoprotein with a furin cleavage site (↓) and also includes the donor and acceptor fluorescence groups Abz and Q-EDDnp, respectively. This peptide was used to investigate the effects of different Mg2+ concentrations on furin hydrolytic activity, as shown in Figure 1. A significant increase in the hydrolysis rate of Abz-SRRHKRFAGV-Q-EDDnp by furin was observed up to 5 mM Mg2+, at higher concentrations the rate of hydrolysis gradually decreased. KCl also increased the rate of hydrolysis of this peptide by furin, but NaCl had no effect. In the absence of Ca2+, furin was completely inactive, even in the presence of Mg2 and K+ ions. The kinetic parameter Km for the hydrolysis of Abz-SRRHKRFAGV-Q-EDDnp by furin decreased almost ten-fold at 10 mM Mg2+ and kcat increased by a similar fold at 5 mM Mg2+ (Figure 2). These changes in Km and kcat resulted in a significant increase in the specificity constant kcat/Km, as depicted in Table 1 (peptide 32). The activation effects of Mg2+ and K+ ions on furin activity were additive for the hydrolysis of Abz-SRRHKRFAGV-Q-EDDnp when rates were determined at a fixed concentration of KCl (20 mM) under varying MgCl2 concentrations (data not shown).
Figure 1.
Effects of MgCl2 (○), KCl (●) and NaCl (□) on the hydrolysis of the FRET peptide Abz-SRRHKRFAGVQ-EDDnp ( peptide 1; 4 μM ) by furin. Kinetics were examined in buffer containing 10 mM MES, 1 mM CaCl2, 0.01% Triton X-100, pH 7.0 at 36.5 °C. (▲) represents the kinetic conditions in the absence of 1 mM CaCl2 but in the presence of 5mM MgCl2, 20 mM KCl.
Figure 2.
Effects of MgCl2 on the kinetic parameters kcat (○) and Km (●) for the hydrolysis of Abz- SRRHKRFAGVQ -EDDnp (peptide 1) in 10 mM MES, 1 mM CaCl2, 0.01% Triton X- 100, at pH 7.0 and 36.5 °C.
Table 1.
Kinetic parameters for the hydrolysis by human furin of FRET peptides (Abz-peptidyl-Q-EDDnp) derived from the sequences of viral envelope glycoproteins in the presence of 5 mM MgCl2. Shown in parentheses are the values in the absence of MgCl2. Conditions of hydrolysis: Mes 10 mM, 1 mM CaCl2, 0,01% Triton X-100, pH 7.0 and 36.5°C. Errors were less than 5% for each of the kinetic parameters. R: relative kcat/Km values in presence vs. absence of MgCl2
| Abz-peptidyl-Q-EDDnp | kcat (s−1) | Km (μM) | kcat/Km (mM.s)−1 | (R) | |
|---|---|---|---|---|---|
| Filoviridae | |||||
| 1 | RKRSRR↓QVNT (Eb. Sudan GP) | 11.3 (8.4) | 0.20 (6.5) | 56300 (1291) | 44 |
| 2 | QIRAKR↓ELSK (Eb. Reston sGP) | 6.7 (9.7) | 1.2 (12) | 5583 (808) | 6.9 |
| 3 | GRRTRR↓EAIV (Eb. Zaire GP) | 4.2 (3.6) | 0.21 (1.2) | 20190 (3085) | 6.5 |
| 4 | TRKQKR↓SVRQ (Eb. Reston GP) | 9.3 (9.8) | 1.6 (10.6) | 5819 (918) | 6.3 |
| 5 | VVRVRR↓ELLP (Eb. Zaire sGP) | 16.6 (12.2) | 1.3 ( 3.5) | 13071 (3466) | 3.8 |
| 6 | SRRKRR↓DVTP (Eb. Ivory Coast GP) | 9.9 (9.2) | 0.15 (0.45) | 66000 (20467) | 3.2 |
| 7 | MMRHRR↓ELQR (Eb. Sudan sGP) | 10.3 (16.2) | 0.44 (1.2) | 23409 (13508) | 1.7 |
| 8 | LTRQRR↓SLLP (Eb. Ivory Coast sGP) | 3.3 (1.8) | 0.9 (0.64) | 3510 (2708) | 1.3 |
| 9 | YFRRKR↓SILW (Marburg Vírus GP) | 35.0 (28.6) | 13.0 (5.6) | 2692 (5124) | 0.5 |
|
| |||||
| Flaviviridae | |||||
| 10 | SGRSRR↓AIDL (Yellow Fever virus M) | 6.2 (4.3) | 0.39 (0.81) | 15923 (5328) | 3.0 |
| 11 | GSRTRR↓SVLI (Tick-borne Encephalitis) | 7.2 (3.7) | 1.4 (1.5) | 5091 (2460) | 2.1 |
| 12 | SRRSRR↓SLTV (West Niles virus M) | 6.2 (4.3) | 0.39 (0.81) | 15923 (5328) | 1.9 |
| 13 | SKRSRR↓SVSV (Japan β Encephalitis) | 18.3 (10.5) | 0.49 (0.41) | 37347(25362) | 1.5 |
| 14 | HRRQKR↓SVAL (Dengue 3 ) | 14.9 (9.2) | 0.37 (0.28) | 40270 (32431) | 1.2 |
| 15 | RRRDKR↓SVAL (Dengue 4 ) | 12.2 (14.6) | 0.41 (0.39) | 29658 (37505) | 0.8 |
| 16 | HRREKR↓SVAL (Dengue 2 ) | 7.6 (12.2) | 0.20 (0.22) | 38300 (55636) | 0.7 |
| 17 | HRRDKR↓SVAL (Dengue 1 ) | 12.7 (9.5) | 0.55 (0.26) | 23091 (36615) | 0.6 |
|
| |||||
| Retroviridae | |||||
| 18 | VQREKR↓AVGI (HIV GP-160) | 2.7 (1.2) | 2.1 (2.8) | 1290 (407) | 3.2 |
| 19 | GIRRKR↓SVSH (Rous Sarcoma GP) | 29.6 (30.3) | 0.42 (0.39) | 70547 (77100) | 0.9 |
| 20 | SIRHKR↓EPSV (Friend Leukemia) | 1.6 (2.1) | 2.4 (2.8) | 646 (729) | 0.9 |
| 21 | KRRQRR↓RPPQ (HIV-1 Tat) | Slow Hydrolysis | |||
|
| |||||
| Herpesviridae | |||||
| 22 | SRRKRR↓SAST (HHV-8) | 11.1 (10.0) | 0.14 (5.0) | 76232 (1992) | 38 |
| 23 | HNRTKR↓STDG (CMV/Towne) | 7.8 (0.26) | 0.95 (0.87) | 8210 (289) | 28 |
| 24 | THRTRR↓STSD (CMV/AD169) | 8.1 (0.44) | 1.9 (1.2) | 4128 (370) | 11 |
| 25 | LRRRRR↓DAGN (Epstein Barr gp 110) | 12.3 (1.1) | 3.6 (3.3) | 3455 (348) | 9.9 |
| 26 | KIRRRR↓DVVD (HHV-6A) | 3.1 (0.60) | 0.05 (0.10) | 53448 (6000) | 8.9 |
| 27 | RKRRKR↓ELET (HHV-7) | 4.3 (0.23) | 3.1 (1.4) | 1400 (164) | 8.5 |
| 28 | NLRRRR↓DLVD (HHV-6B) | 3.5 (2.0) | 0.33 (1.4) | 10606 (1470) | 7.2 |
| 29 | NTRSRR↓SVPV (Varicella Zoster Gb) | Slow Hydrolysis | |||
|
| |||||
| Orthomyxoviridae | |||||
| 30 | LKRRRR↓DTQQ (Borna Disease) | 6.7 (0.61) | 5.2 (0.28) | 1303 (2184) | 0.6 |
| 31 | RRRKKR↓GLFG [Influenza HA (H5N1)] | 5.0 (NH) | 15.5 (NH) | 322 (NH) | - |
|
| |||||
| Paramyxoviridae | |||||
| 32 | SRRHKR↓FAGV (Measle virus Fo) | 2.4 (0.21) | 0.07 (0.37) | 33857 (559) | 60 |
| 33 | KKRKRR↓FLGF (Respiratory-Syncyntial virus) | 1.1 (0.64) | 0.52 (1.3) | 2173 (512) | 4.2 |
|
| |||||
| Coronaviridae | |||||
| 34 | TRRFRR↓SITE (Infectious Bronchitis) | 19.8 (16.4) | 0.53 (0.58) | 37358 (28362) | 1.3 |
Effects of MgCl2 on the pH profiles of furin activity
Figure 3 shows the pH profiles of furin hydrolysis for four FRET peptides in the presence and absence of MgCl2. Due to the large effect of Mg2+ on its hydrolysis, the peptide Abz-SRRHKRFAGVQ-EDDnp was chosen as one of the substrates to evaluate the relationship of Mg2+ to the pH profile of furin activity. Abz-SRRHKRFAGVQ-EDDnp contains one H and its imidazole side chain has a pK that is in the pH range 6–7 (23). In order to exclude a substrate titration effect in the pH profile, we examined the hydrolysis of Abz-RKRSRRQVNTQ-EDDnp, which contains the sequence of the Ebola Sudan envelope glycoprotein and which is also highly activated by Mg2+ (peptide 1 in Table 1). We further examined the pH profiles of the hydrolysis of the peptide Abz-SGRSRRAIDLQ-EDDnp from yellow fever virus M envelope glycoprotein, which contains a completely different prime site sequence, including a negatively charged D (peptide 10, Table 1). Lastly, the pH profile of the hydrolysis of the small substrate Ac-RVRR-MCA was also examined for comparison.
Figure 3.
pH-profile of furin activity and effect of MgCl2 in the presence (●) and absence (○) of 5 mM MgCl2. pKs in the presence of MgCl2 (values in parentheses are without KCl).
Abz-RKRSRRQVNTQ-EDDnp - pK1= 5.46 (5.67) and pK2= 9.54 (7.80)
Abz-SRRHKRFAGVQ-EDDnp - pK1= 5.27 (5.42) and pK2= 9.54 (8.93)
Abz-SGRSRRAIDLQ-EDDnp - pK1= 5.70 (6.35) and pK2= 9.10 (8.00)
Ac-RVRR-MCA - pK1= 7.10 (6.41) and pK2= 9.20 (8.60)
The optimum pHs for the hydrolysis of all four substrates were in the ranges 7.5–8.0 and 6.5–7.0 in the presence and the absence of MgCl2, respectively. All of the data were fit to a single bell-shaped curve, and two pKs (pK1 and pK2) could be determined. The pK1 values for the pH profiles of hydrolysis of the three substrates derived from virus envelope glycoprotein were similar in the presence and absence of MgCl2, but the pK1 was 0.5 units higher in the presence of MgCl2 for the peptide Ac-RVRR-MCA. The pK2 values in the presence of MgCl2 were higher than in the absence of salt for all four substrates. The pH-profiles for hydrolysis of substrates containing a positively charged imidazole of H, or a negatively charged carboxyl group of D in the prime sites, were very similar.
Intrinsic fluorescence
The intrinsic fluorescence spectra of furin in the presence of CaCl2 and increasing amounts of MgCl2 are shown in Figure 4. The fluorescence spectra are typical of W, and the presence of MgCl2 did not shift the wavelength of the maximum peak of the spectra but significantly reduced the intensities of the peaks. The maximal fluorescence intensities from the five emission spectra obtained were plotted as a function of the MgCl2 concentration. The fluorescence changes ΔF = F0−Fobs, where F0 is the initial fluorescence value of the furin solution and Fobs is the observed fluorescence value in the presence of MgCl2, fit to a single site saturation curve represented by equation (1)
Figure 4.
Effect of magnesium chloride on the intrinsic fluorescence of furin. Spectra of furin without salt (——), in the presence of 1 mM (— — —), 5 mM (.........), 30 mM (— · —) and 50 mM (— · · —) MgCl2. The insert shows the binding curve of magnesium chloride for furin (Kd= 1.08 mM).
| (Eq 1) |
The data fit to equation 2 with an observed dissociation constant (Kd(obs)) of 1.1 ± 0.1 mM for Mg2+.
Effects of MgCl2 on the hydrolysis by furin of FRET peptides derived from virus and human protein precursors
Tables 1 and 2 show the kinetic parameters of hydrolysis by furin in the presence and absence of MgCl2 for the various FRET decapeptides (Abz-peptidyl-Q-EDDnp) derived from virus and human protein precursors. All of these peptides contain the canonical consensus cleavage site motif R-X-K/R-R required by furin, they are here grouped into the virus families from which the sequences of the envelope glycoproteins were derived. The peptides were ordered within each virus family by their relative kcat/Km values (R) in the presence vs. the absence of MgCl2. In the presence of 5 mM MgCl2 the kcat/Km values for the hydrolysis of most of the FRET peptides derived from viruses were significantly higher than in the absence of Mg2+ (Table 1). In contrast, the kcat/Km values for the hydrolysis of almost all FRET peptides derived from human proteins were largely reduced by Mg2+ (Table 2). These results indicate that the efficiency of Mg2+ in activating furin is highly dependent on particular combinations of amino acids at different substrate positions, a possible result of the cooperativity of furin subsites (12) and also observed in other proteases (recently reviewed in 24).
Table 2.
Kinetic parameters for the hydrolysis by human recombinant furin of FRET peptides (Abz-peptidyl-Q-EDDnp) derived from the sequences spanning the cleavage sites for the activation of human proproteins in the presence of 5 mM MgCl2. The values in parentheses were obtained in the absence of MgCl2.
| Abz-peptidyl-Q-EDDnp | kcat (s−1) | Km (μM) | kcat/Km (mM.s)−1 | (R) | |
|---|---|---|---|---|---|
| 35 | RRRAKR↓SPKH (hBMP-4 (1st site ) | 5.3 (8.7) | 1.2 (12.2) | 4383 (710) | 6.2 |
| 36 | SSRHRR↓ALDT (hTGF-β3) | 7.1 (5.6) | 4.16 (0.86) | 1707 (6488) | 0.3 |
| 37 | HHRQRR↓SVSI (hADAM-TS 6) | 28.9 (39.5) | 3.2 (0.3) | 9031 (116088) | 0.1 |
| 38 | Ac-RVRR-MCA | 0.59 (0.98) | 4.9 (0.86) | 120 (1139) | 0.1 |
| 39 | HKREKR↓QAKH (hBMP-2 (1st site) | 6.3 (6.9) | 2.7 (0.38) | 2354 (17734) | 0.1 |
| 40 | GQRKKR↓ALDT (hTGF-β2) | 3.6 (3.9) | 4.4 (0.27) | 829 (14130) | 0.06 |
| 41 | QSRRRR↓QTPP (MT-MMP 4) | 3.4 (6.3) | 2.21 (0.20) | 1547 (31067) | 0.05 |
| 42 | RNRQKR↓FVLS (MT-MMP 3) | NH (0.20) | NH (0.59) | NH (337) | - |
| 43 | VRRRRR↓YALS (MT-MMP 6) | NH (0.60) | NH (3.14) | NH (193) | - |
Conditions of hydrolysis are the same as in Table 1. Ac-RVRR-MCA was included for comparison
The haemagglutinin glycoprotein (HA) of the influenza A virus plays an essential role in viral invasion of the cells, which depends on its cleavage by host proteases into the fragments HA1 and HA2 (25). Such cleavage renders HA susceptible to conformational changes at low pH in the endosome (for reviews see 18,19). The FRET peptide Abz-RRRKKR↓GLFG-Q-EDDpp, which contains the processing site haemagglutinin glycoprotein (HA) of influenza A virus H5N1, required KCl for its hydrolysis by furin (Izidoro et al., 2009). Better substrates were obtained with analogues of this peptide substituting amino acids that are more frequently found at prime site positions in substrates highly susceptible to furin (12). Table 3 shows the kinetic parameters for the hydrolysis of these peptides in the presence of Mg2+. The FRET substrate Abz-RRRKKR↓GLFG-Q-EDDnp (peptide 44) was hydrolyzed only in the presence of Mg2+, and the hydrolysis of analogues (peptides 45 to 47) modified at positions P1′ and P3 with the amino acids most frequently found in the best substrates for furin (12) was also significantly activated by Mg2+. It is noteworthy that highly efficient hydrolysis of the peptide Abz-RERRRKKR↓GLFG-Q-EDDnp (peptide 48) by Mg2+-activated furin was observed; this peptide contains two additional residues (R and E) at its N-terminus. These two residues correspond to the two insertions reported in haemagglutinin in the avian influenza A (H5N1) virus obtained from a child with fatal respiratory illness in Hong-Kong (26).
Table 3.
Kinetic parameters for the hydrolysis by human recombinant furin of FRET peptides derived from Abz-RRRKKRGLFG-Q-EDDnp, the H5N1 influenza hemagglutinin (HA) processing site, in the absence (in parentheses) and in the presence of 5 mM MgCl2.
| N0 | Abz-peptidyl-Q-EDDnp | kcat (s−1) | Km (μM) | kcat/Km (mM.s)−1 | (R) |
|---|---|---|---|---|---|
|
| |||||
| 44 | RRRKKR↓GLFG [Influenza HA (H5N1)] | 5.0 (NH) | 15.5 (NH) | 322 (NH) | - |
| 45 | RRRKKR↓GLSG (F>S) | 6.7 (2.4) | 0.22 (3.01) | 30500 (797) | 38 |
| 46 | RRRKKR↓SLFG (G>S) | 7.6 (1.0) | 0.23 (1.65) | 33043 (606) | 54 |
| 47 | RRRKKR↓SLSG (G>S. F>S) | 4.5(0.92) | 0.24 (0.69) | 18833 (1333) | 14 |
| 48 | RERRRKKR↓GLFG [Influenza HA (H5N1)] | 12.3(2.6) | 0.1(1.6) | 123000 (1555) | 79 |
Effects of MgCl2 on the hydrolysis by Kex2 of FRET peptides derived from Saccharomyces cerevisiae pro-α-mating factor
Kex2 is the prototype of the large family of eukaryotic pro-protein processing proteases that includes furin (7); this enzyme is necessary for the production and secretion of mature α-mating factor and killer toxin in S. cerevisiae by proteolysis at paired dibasic sites (27). We examined the effects of Mg2+ on the hydrolysis by kex2 of Abz-YKR↓EAD-Q-EDDnp and Abz-LDKR↓EAE-Q-EDDnp, peptides containing kex2 cleavage sites derived from pro-α-mating factor. The kcat/Km values for the hydrolysis of these peptides by kex2 in the absence of Mg2+ were 7939 and 353 mM−1s−1, respectively. As shown in Figure 5, Mg2+ inhibited kex2-mediated hydrolysis of both peptides, not depending on the efficiently they were hydrolyzed in the absence of Mg2+.
Figure 5.
Effects of Mg2+ on the hydrolysis of 12 μM of Abz-YKREAD-Q-EDDnp (●) and 130 uM of Abz-LDKREAE-Q-EDDnp (○) by Kex2. The experiment was performed using 200 Bis-Tris, 1 mM CaCl2, 0.01% Triton and pH 7.0 at 36.5°C.
Discussion
The major finding of this work is that major and selective activation by Mg2+ ions of furin occurs for substrate sequences derived from virus envelope glycoproteins as compared to other eukaryotic proproteins. The peptide Abz-SRRHKR↓FAGV-Q-EDDnp (peptide 32, Table 1), derived from the measles virus fusion protein Fo, exhibited a 60-fold increased kcat/Km value in the presence of Mg2+. We hypothesize that the increase in yield of measles and dengue virus production in cell culture induced by MgCl2 reported earlier (14,28) is related to the higher susceptibility of these virus envelope glycoproteins to furin cleavage in the presence of Mg2+ ions. The hydrolysis of peptides derived from the filoviridae (Ebola) and herpesviridae virus families were also significantly increased by MgCl2. The especially large activation by Mg2+ of the hydrolysis of the peptide Abz-RERRRKKR↓GLFG-Q-EDDnp (peptide 48, Table 3) derived from Asian avian influenza A (H5N1) is noteworthy. As the pathogenicity of influenza virus depends on its capacity to invade the host cells, which is in turn dependent on host proteinase processing of virus haemagglutinin, the insertion of the amino acids E and R in this particular substrate possibly renders its haemagglutinin more susceptible to furin hydrolysis in the presence of cellular Mg2+ ions- thus greatly improving virus infectivity.
The efficiency of furin hydrolysis was highly dependent on the particular combinations of amino acids at different substrate positions, as previously reported (12). Similar interdependence of furin subsites also seems to occur in the activation of furin by MgCl2, and it is very possible that a large degree of cooperativity between furin subsites exists as recently reported for other peptidases (24,29). A more detailed analysis of cooperativity among the various furin subsites is clearly required; this work is currently in progress in our laboratory.
Any analysis of cooperativity should take into account that all furin substrates are highly positively charged; the accommodation of guanidinium and ammonium side chain cations at the negatively charged S1, S2 and S4 furin subsites can most likely be modulated by the occupancy of the other subsites and by salts. In addition, activation by Mg2+ seems to be a furin peculiarity that we did not observe with kex2, the prototype of the convertase family which includes furin.
Although the free concentrations of Mg2+ in cell compartments are not known, in most mammalian cells this free ion is present in the range of 1 to 3 mM and represents less than 10% of the total magnesium within cells (13,15,16). It is noteworthy that the KD = 1.08 ± 0.1 mM for the dissociation constant of Mg2+ from furin, obtained with intrinsic fluorescence measurements, is within the physiological range of intracellular Mg2+ concentrations. However, we should consider that cells infected by virus can have Mg2+ transport through the cell membrane affected in a manner that results in increased Mg2+ intracellular accumulation.
Any proposal to explain the mechanism of activation of furin by cations would be highly speculative at this point and would also require further information on the interdependence of furin subsites. However, it seems probable from the data presented above that virus envelope glycoprotein mutations have been selected to increase susceptibility to furin inside cells, a milieu rich K+ and Mg2+ ions. An example of this process is likely to be the insertion of the amino acids E and R in the H5N1 influenza virus hemagglutinin, which greatly increases virulence, possibly by increased susceptibility of this sequence to Mg+-stimulated furin hydrolytic activity.
Acknowledgments
This work was supported by the Brazilian research agencies Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) and Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) to LJ and DA05084 to IL.
Abbreviations
- ADAM-TS
A Disintegrin and Metalloproteinase with Thrombospondin
- hBMP
Human Bone Morphogenetic Protein
- MT-MMP
Membrane Type-Matrix Metalloprotease
- TGF-β
Transforming Growth Factor -β
- HHV
Human Herpes Virus
- CMV/AD169
Cytomegalovirus/strain AD169-protein
- CMV/Towne
Cytomegalovirus/strain Town-protein
- MCA
amino-(methyl)-coumarin
- FRET
Fluorescent Resonance Energy Transfer
- PACE
Paired Basic Amino Acid Cleaving Enzyme
- ACN
acetonitrile
- DTT
dithiothreitol
- Abz
ortho-aminobenzoic acid
- EDDnp
N-(2,4-dinitrophenyl) ethylenediamine
- TGR resin
(dimethoxybenzhydrylamine-PEG)-resin
- tBu
tert-butyl
- Fmoc
(fluoren-9-ylmethoxycarbonyl)
- HOBt
N hydroxybenzotriazole
- HBTU
O-Benzotriazole-N,N,N′,N′-tetramethyl-uronium-hexafluoro-phosphate
- EDT
ethanedithiol
- TFA
trifluoroacetic acid
References
- 1.Molloy SS, Bresnahan PA, Leppla SH, Klimpel KR, Thomas G. Human furin is a calcium-dependent serine endoprotease that recognizes the sequence Arg-X-X-Arg and efficiently cleaves anthrax toxin protective antigen. J Biol Chem. 1992;267:16396–16402. [PubMed] [Google Scholar]
- 2.Schechter I, Berger A. On the size of the active site in proteases. I Papain Biochem Biophys Res Commun. 1982;27:157–162. doi: 10.1016/s0006-291x(67)80055-x. [DOI] [PubMed] [Google Scholar]
- 3.Rockwell NC, Thorner JW. The kindest cuts of all: crystal structures of Kex2 and furin reveal secrets of precursor processing. Trends Biochem Sci. 2004;29:80–87. doi: 10.1016/j.tibs.2003.12.006. [DOI] [PubMed] [Google Scholar]
- 4.Holyoak T, Kettner CA, Petsko GA, Fuller RS, Ringe D. Structural basis for differences in substrate selectivity in Kex2 and furin protein convertases. Biochemistry. 2004;43:2412–2421. doi: 10.1021/bi035849h. [DOI] [PubMed] [Google Scholar]
- 5.Henrich S, Lindberg I, Bode W, Than ME. Proprotein convertase models based on the crystal structures of furin and kexin: explanation of their specificity. J Mol Biol. 2004;345:211–227. doi: 10.1016/j.jmb.2004.10.050. [DOI] [PubMed] [Google Scholar]
- 6.Nakayama K. Furin: a mammalian subtilisin/Kex2p-like endoprotease involved in processing of a wide variety of precursor proteins. Biochem J. 1997;327:625–635. doi: 10.1042/bj3270625. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 7.Zhou A, Webb G, Zhu X, Steiner DF. Proteolytic processing in the secretory pathway. J Biol Chem. 1999;274:20745–20748. doi: 10.1074/jbc.274.30.20745. [DOI] [PubMed] [Google Scholar]
- 8.Molloy SS, Anderson ED, Jean F, Thomas G. Bi-cycling the furin pathway: from TGN localization to pathogen activation and embryogenesis. Trends Cell Biol. 1999;9:28–35. doi: 10.1016/s0962-8924(98)01382-8. [DOI] [PubMed] [Google Scholar]
- 9.Seidah NG, Chrétien M. Proprotein and prohormone convertases: a family of subtilases generating diverse bioactive polypeptides. Brain Research. 1999;848:45–62. doi: 10.1016/s0006-8993(99)01909-5. [DOI] [PubMed] [Google Scholar]
- 10.Thomas G. Furin at the cutting edge: from protein traffic to embryogenesis and disease. Nat Rev Mol Cell Biol. 2002;3:753–766. doi: 10.1038/nrm934. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 11.Rockwell NC, Krysan DJ, Komiyama T, Fuller RS. Precursor processing by kex2/furin proteases. Chem Rev. 2002;102:4525–4548. doi: 10.1021/cr010168i. [DOI] [PubMed] [Google Scholar]
- 12.Izidoro MA, Gouvea IE, Santos JAN, Assis DM, Oliveira V, Judice WAS, Juliano MA, Lindgerger I, Juliano L. A study of human furin specificity using synthetic peptides derived from natural substrates, and effects of potassium ions. Arch Biochem Biophys. 2009;487:105–114. doi: 10.1016/j.abb.2009.05.013. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 13.Blatter LA, McGuigan JA. Estimation of the upper limit of the free magnesium concentration measured with Mg-sensitive microelectrodes in ferret ventricular muscle: (1) use of the Nicolsky-Eisenman equation and (2) in calibrating solutions of the appropriate concentration. Magnesium. 1988;7:154–165. [PubMed] [Google Scholar]
- 14.Matsumura T, Stollar V, Schlesinger RW. Effects of ionic strength on the release of dengue virus from Vero cells. J Gen Virol. 1972;17:343–347. doi: 10.1099/0022-1317-17-3-343. [DOI] [PubMed] [Google Scholar]
- 15.Grubbs RD. Intracellular magnesium and magnesium buffering. Biometals. 2002;15:251–259. doi: 10.1023/a:1016026831789. [DOI] [PubMed] [Google Scholar]
- 16.Scarpa A, Brinley FJ. In situ measurements of free cytosolic magnesium ions. Fed Proc. 1981;40:2646–2652. [PubMed] [Google Scholar]
- 17.Schmitz C, Deason F, Perraud AL. Molecular components of vertebrate Mg2+-homeostasis regulation. Magnesium Research. 2007;20:6–18. [PubMed] [Google Scholar]
- 18.Zambon MC. The pathogenesis of influenza in humans. Rev Med Virol. 2001;11:227–241. doi: 10.1002/rmv.319. [DOI] [PubMed] [Google Scholar]
- 19.Horimoto T, Kawaoka Y. Influenza: Lessons from past pandemics, warnings from current incidents. Nature Reviews Microbiology. 2005;3:591–600. doi: 10.1038/nrmicro1208. [DOI] [PubMed] [Google Scholar]
- 20.Kacprzak MM, Peinado JR, Than ME, Appel J, Henrich S, Lipkind G, Houghten RA, Bode W, Lindberg I. Inhibition of furin by polyarginine-containing peptides: nanomolar inhibition by nona-D-arginine. J Biol Chem. 2004;279:36788–36794. doi: 10.1074/jbc.M400484200. [DOI] [PubMed] [Google Scholar]
- 21.Brenner C, Fuller RS. Structural and enzymatic characterization of a purified prohormone-processing enzyme: secreted, soluble Kex2 protease. Proc Natl Acad Sci USA. 1992;89:922–926. doi: 10.1073/pnas.89.3.922. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 22.Korkmaz B, Attucci S, Juliano MA, Kalupov T, Jourdan ML, Juliano L, Gauthier F. Measuring elastase, proteinase 3 and cathepsin G activities at the surface of human neutrophils with fluorescence resonance energy transfer substrates. Nature Protocols. 2008;3:991–1000. doi: 10.1038/nprot.2008.63. [DOI] [PubMed] [Google Scholar]
- 23.Paiva AC, Juliano L, Boschcov P. Ionization of methyl derivatives of imidazole, histidine, thyreotropin releasing factor, and related compounds. J Am Chem Soc. 1976;98:7645–7648. doi: 10.1021/ja00440a033. [DOI] [PubMed] [Google Scholar]
- 24.Ng NM, Pike RN, Boyd SE. Subsite cooperativity in protease specificity. Biol Chem. 2009;390:401–407. doi: 10.1515/BC.2009.065. [DOI] [PubMed] [Google Scholar]
- 25.Steinhauer DA. Role of Hemagglutinin Cleavage for the Pathogenicity of Influenza Virus. Virology. 1999;258:1–20. doi: 10.1006/viro.1999.9716. [DOI] [PubMed] [Google Scholar]
- 26.Subbarao K, Klimov A, Katz J, Regnery H, Lim W, Hall H, Perdue M, Swayne D, Bender C, Huang J, Hemphill M, Rowe T, Shaw M, Xu X, Fukuda K, Cox N. Characterization of an avian influenza A (H5N1) virus isolated from a child with a fatal respiratory illness. Science. 1998;279:393–396. doi: 10.1126/science.279.5349.393. [DOI] [PubMed] [Google Scholar]
- 27.Fuller RS, Sterne RE, Thorner J. Enzymes Required for Yeast Prohormone Processing. Annual Review of Physiology. 1988;50:345–362. doi: 10.1146/annurev.ph.50.030188.002021. [DOI] [PubMed] [Google Scholar]
- 28.Boriskin YS, Steinberg LL, Dorofeeva LV, Zasorina IN, Barkova EP. Salt-induced enhancement of measles virus yields in cultured cells. Arch Virol. 1988;101:131–136. doi: 10.1007/BF01314658. [DOI] [PubMed] [Google Scholar]
- 29.Boyd SE. POPS: A computational tool for modeling and predicting protease specificity. Journal of Bioinformatics and Computational Biology. 2005;3:551–585. doi: 10.1142/s021972000500117x. [DOI] [PubMed] [Google Scholar]





