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The American Journal of Tropical Medicine and Hygiene logoLink to The American Journal of Tropical Medicine and Hygiene
. 2016 Apr 6;94(4):710–716. doi: 10.4269/ajtmh.15-0862

The Spectrum of Chromobacterium violaceum Infections from a Single Geographic Location

Yi dan Lin 1,*, Suman S Majumdar 1, Jann Hennessy 1, Robert W Baird 1
PMCID: PMC4824208  PMID: 26903614

Abstract

Chromobacterium violaceum is a bacterium associated with soil and water exposure in tropical regions and causes rare and serious clinical infections that are often fatal. We reviewed the demographic and clinical details of 28 patients with C. violaceum detected over 15 years from 2000 to 2015, from the Top End of the Northern Territory. Of these patients, 18 had infections attributable to C. violaceum. Patients with infections were more commonly male (55.6%), and in the 16- to 60-year (61.1%) age group. Skin and soft tissue infections (50%), predominantly involving the limbs, were the major clinical manifestation. Water, mud exposure, and trauma were all noted as precipitating circumstances and comorbidities were present in 61.1% of the patients with infections. Of the 28 patients, 10 (35.8%) had C. violaceum isolated as an incidental finding or as asymptomatic colonization; these 10 patients did not require or receive therapy for C. violaceum bacterial infections. There were no relapsing infections in this group. Chromobacterium violaceum remains a serious infection, with seven patients (25%) in our series requiring intensive care management. However, the mortality rate (7.1%) in our series was far lower than previously described. This case series of C. violaceum infections from a single geographic area provides additional information of the characteristics of infection with this pathogen.

Introduction

Chromobacterium violaceum is one of the four oxidase-positive gram-negative bacteria, Vibrio spp., Aeromonas spp., C. violaceum, and Shewanella spp. (known as VACS),1 associated with waterborne infections in tropical regions. Chromobacterium violaceum is a gram-negative bacillus characterized by the growth of smooth violet-black colonies on common laboratory media due to the pigment, violacein.2 A total of 154 cases of C. violaceum have been previously published. Location data available for 143 cases reveal a worldwide tropical distribution comprising western Pacific (Vietnam, Japan, Korea, Cambodia, Malaysia, China, Australia, Singapore, Laos, and Papua New Guinea) with 49 cases (34.3%),312 the Americas with 46 cases (30.0%),3,13,14 southeast Asia (Thailand, India, Sri Lanka, and Nepal) with 23 cases (16.0%),3,1522 Africa with 22 cases (15.4%),23,24 Persian Gulf with two cases (1.4%),25 and Europe with one case (0.7%).26

Chromobacterium violaceum is associated with a spectrum of disease from localized skin and soft tissue infection (SSTI) to systemic or invasive infection including necrotizing fasciitis,13 visceral abscesses, osteomyelitis, and central nervous system disease.3 Published cases often describe severe sepsis and high case fatality rates (up to 60%)3 among patients, particularly in children with chronic granulomatous disease (CGD).10,22

In a recent analysis of VACS organisms from the Northern Territory of Australia, C. violaceum had significantly different epidemiology to the other organisms.1 The Top End of the Northern Territory is a geographical area of approximately 500,000 km2, with a 13,500 km coastline, tropical climate, and relatively low population density. The aim of this case series was to assess in detail the geographical distribution, demographic and clinical characteristics, and outcomes of C. violaceum infections in the Top End of the Northern Territory between January 2000 and March 2015 and assess factors associated with infection compared with colonization.

Methods

Cases of C. violaceum were identified between January 2000 and March 2015 using the common laboratory database of the Top End public hospitals (Darwin, Katherine, and Gove hospitals). As the public microbiology laboratory is the only microbiology laboratory in the Northern Territory, we believe our case detection method using the laboratory database identifies the majority of infections that are laboratory confirmed. Population prevalence was derived from Australian Bureau of Statistical Data for the Northern Territory (population data were urban population compared with remote population over the 15-year period of the study). Data on identified C. violaceum cases were linked to government electronic health records and patient files to collect information on demographics (age, sex, and residence), site of infection, potential exposure source, comorbidities (diabetes, cancer, immunosuppression, hazardous alcohol use, chronic lung disease/smoking, chronic liver disease, and chronic kidney disease), severity (hospitalization, intensive care unit [ICU] admission), antibiotic therapy, and clinical outcomes (cure or death at 30 days from sample isolation). Colonization or an incidental finding of bacteria was defined as the presence of the bacteria, without signs of illness or infection attributable to the bacteria, when a probable alternative diagnosis was present or when deemed clinically insignificant by the treating team and no directed therapy given.

Laboratory isolates were identified by biochemical and phenotypic methods, including API (BioMerieux, Marcy l'Etoile, France) and VITEK 2 (BioMerieux). As Clinical and Laboratory Standards Institute (Wayne, PA) and EUCAST breakpoints are not available for C. violaceum, antimicrobial susceptibilities were interpreted using Pseudomonas aeruginosa susceptibility criteria as indicative susceptibilities, for the following antibiotics: piperacillin–tazobactam, meropenem, ceftazidime, cefepime, ciprofloxacin, and the aminoglycosides.1 Statistical analysis was performed using χ2 or Fisher's exact tests where appropriate (Microsoft Excel 2010, Redmond, WA).

The study was registered with the Human Research Ethics Committee (HREC) of the Northern Territory Department of Health and Menzies School of Health Research (HREC reference number 2015-2359).

Results

During the 15-year study period, 28 patients with C. violaceum were identified with 12 cases in the last 5 years compared with 16 cases in the 10 years from 2000. Patients with C. violaceum isolated resided more commonly in coastal regions, and though there were 14 isolations from the major population center of Darwin (Figure 1 ), the prevalence was 1.03/10,000 population in urban centers, over the 15-year period compared with 3.25/10,000 population in remote areas of the Top End. Isolation of C. violaceum did not occur in the inland centers of the Northern Territory (Alice Springs or Tennant Creek hospitals) in arid Central Australia, where year-round rainfall is low, and saltwater is absent. There was no obvious seasonal pattern of infection apparent, as infections occurred year-round.

Figure 1.

Figure 1.

Residential locations of patients with Chromobacterium violaceum detected in the Top End of the Northern Territory, 2000–2015. Stars indicate the location of individual cases from that location.

Of the 28 patients with C. violaceum isolated, 10 met the criteria for colonization. Table 1 displays the demographic details and risk factors for both colonized and infected patients. There were no significant differences between the two groups according to demographics and clinical characteristics. The median age of all patients was 40 years (range = 0–82 years). Colonized patients were younger (mean age = 29.4 years), compared with infected patients (mean age = 42.5 years) and more commonly female (70%), but this was not statistically significant. Infected patients were commonly male (55.6%) between the ages of 16 and 60 (61.1%) years.

Table 1.

Demographic details of patients with Chromobacterium violaceum detected in the Northern Territory 2000–2015

Demographic details of patients with C. violaceum isolated Number of patients (%) P value Total (%)
Incidental Infected
Sex
 Female 7 (70) 8 (44.4) 0.19 15 (53.6)
 Male 3 (30) 10 (55.6) 13 (46.4)
Age (years)
 0–15 5 (50) 3 (16.7) 0.11 8 (28.6)
 16–60 3 (30) 11 (61.1) 14 (50)
 > 60 2 (20) 4 (22.2) 6 (21.4)
Specimen site (of initial isolate)
 Skin and soft tissue 3 (30) 9 (50) 0.3 12 (66.7)
  Lower limb 3 (100) 4 (44.4) 7 (58.3)
  Upper limb 0 3 (33.3) 3 (25)
  Torso 0 2 (22.2) 2 (16.7)
 Respiratory 3 (30) 3 (16.7) 6 (21.4)
 Feces 4 (40) 0 4 (14.3)
 Urine 0 4 (22.2) 4 (14.3)
 Blood 0 2 (11.1) 2 (7.1)
Precipitating circumstances
 Water exposure 2 (20) 3 (16.7) 0.23 5 (17.9)
 Trauma 2 (20) 3 (16.7) 5 (17.9)
 Remote location 1 (10) 3 (16.7) 4 (14.3)
 Mud exposure 0 3 (16.7) 3 (10.7)
 Insect bite 0 1 (5.6) 1 (3.6)
 Nil recorded 5 (50) 5 (27.8) 10 (35.7)
Comorbidities (one or more)
 Alcohol excess 1 (10) 5 (22.2) 0.28 6 (21.4)
 Malignancy 2 (20) 3 (16.7) 5 (17.9)
 Chronic lung  disease/smoker 2 (20) 2 (11.1) 4 (14.3)
 Diabetes 0 3 (16.7) 3 (10.7)
 Chronic liver disease 1 (10) 1 (5.6) 2 (7.1)
 Severe chronic  renal disease 0 2 (11.1) 2 (7.1)
 Nil 6 (60) 7 (38.9) 13 (46.4)

In patients with infection, SSTI was the most frequent infection (50%), with limb infections (77.8%) more common. Two patients (11.1%) presented with septicemia. In the colonization group, fecal (40%) and respiratory (30%) sites were the most common.

Thirteen patients with infections (62.2%) had exposure to water, mud, or a traumatic episode, compared with 50% of the colonized patients.

Comorbidities were common, including malignancy, diabetes, and excessive alcohol use in 61.1% of infected patients, compared with comorbidities being present in 40% of patients who had C. violaceum as an incidental finding.

Co-isolation of other bacteria (Table 2) was present in 17 patients (60.7%) and more commonly in patients with infection (72.2%) compared with patients with colonization (40%). Co-pathogens included Enterobacteriaceae (28.6%), environmental gram negatives (21.4%), and Staphylococcus aureus (21.4%).

Table 2.

Co-pathogenic bacteria isolated in conjunction with Chromobacterium violaceum

Presence of coexisting bacterial isolates Number of patients (%) Total (%)
Incidental Infected
Co-pathogen (one or more) 4 (40) 13 (72.2) 17 (60.7)
 Enterobacteriaceae 1 (10) 7 (38.9) 8 (28.6)
 Non-fermentative gram negative* 2 (20) 3 (16.7) 6 (21.4)
Staphylococcus aureus 0 4 (22.2) 6 (21.4)
 Yeast 2 (20) 1 (5.6) 3 (10.7)
 β-hemolytic streptococci 1 (10) 2 (11.1) 3 (10.7)
 Other VACS organisms 0 2 (11.1) 2 (7.1)
 Anaerobes 0 1 (5.6) 1 (3.6)
Acinetobacter sp. 0 1 (5.6) 1 (3.6)
Fecal specimen 4 (40) 0 4 (14.3)
No other bacterial isolates 2 (20) 5 (27.8) 7 (25)

VACS = Vibrio spp., Aeromonas spp., C. violaceum, and Shewanella spp.

*

Stenotrophomonas maltophilia, Chryseobacterium indologenes, Pseudomonas aeruginosa, and Burkholderia cepacia.

Presence of the other bacteria in four patients with fecal detection of C. violaceum not listed.

Table 3 lists the characteristics of the 18 individuals with C. violaceum infection and Table 4 lists the 10 patients with likely colonization or incidental isolation. Of the 28 patients, two (7.1%) with C. violaceum died as a direct result of the infection during the 15-year study period. Seven patients (25%) had severe disease defined by ICU admission during the clinical episode.

Table 3.

Clinical features of patients with Chromobacterium violaceum infections

Case number Sex Diagnosis year Age at diagnosis Site of isolate Clinical disease Mixed culture Treatment Outcome Notes
1 F 2000 23 Lower limb SSTI Coliform sp. Co-trimoxazole. Prior amoxycillin had failed Resolved Jeep bogged in mud, fell onto branch; leg wound. 8 months later, re-explored – chronic infection with granulation tissue.
2 M 2000 12 Upper limb SSTI Mixed coliforms Cephazolin + gentamicin initially, 7 days co-trimoxazole Resolved Right elbow laceration, fell off a motorbike
3 F 2001 42 Torso SSTI Mixed coliforms, yeast on separate tissue Piperacillin–tazobactam 3 days, then meropenem gentamicin 3/7 Deceased Polymicrobial gram-negative sepsis from ischemic bowel, abdominal wall abscess, and fat necrosis
4 F 2001 53 Lower limb SSTI Staphylococcus aureus Gentamicin 7 days. Co-trimoxazole 2 weeks Resolved Diabetic foot infection—deep plantar collection
5 F 2004 78 Urine Urinary tract infection Pure growth Co-trimoxazole 1 month Resolved Co-morbidity – ovarian malignancy with ascites
6 M 2004 52 Torso SSTI Piperacillin–tazobactam 10 days Resolved Sternal wound sepsis post cardiac graft surgery
7 M 2006 19 Sputum Ventilator pneumonia Burkholderia cepacia Meropenem 4 days Resolved Trauma—hit by fiancé's ex with a bat. Subdural, ventilator pneumonia. No other exposure history
8 M 2006 32 Lower limb SSTI Co-trimoxazole 3 weeks Resolved Laceration third, fourth toe while in swamp. Pus drained
9 F 2006 61 Urine Severe sepsis, urosepsis Escherichia coli Meropenem, then piperacillin–tazobactam Resolved Patient was septic from urosepsis, coinfection with E. coli and C. violaceum
10 M 2008 57 Torso SSTI Aeromonas sp., Acinetobacter sp., mixed anaerobes, enteric flora Meropenem 14 days Resolved Found in creek outside hospital, chest wall infection
11 F 2008 38 Blood Septicemia, pneumonia Meropenem 1 week Deceased Homeless patient presented with severe sepsis
12 F 2009 9 Urine Urinary tract infection Co-trimoxazole 2 weeks Resolved Recurrent urosepsis, patient with vesicoureteric reflux
13 M 2010 45 Upper limb SSTI Staphylococcus aureus, Vibrio spp., group G Streptococcus Doxycycline Resolved Stab injury to right hand
14 M 2012 50 Lower limb SSTI Enteric flora, cutaneous flora Cephazolin, then doxycycline Resolved Toe abscess was debrided
15 M 2013 76 Sputum Exacerbation chronic pulmonary disease Stenotrophomonas maltophilia, Chryseobacterium indologenes Co-trimoxazole Resolved Chromobacterium violaceum present with other environmental gram-negative bacteria
16 M 2014 82 Urine Urinary tract infection Pseudomonas sp. Ceftazidime 2 days, then norfloxacin Resolved Symptomatic urinary tract infection, with C. violaceum and Pseudomonas aeruginosa both present
17 M 2015 21 Upper limb SSTI S. aureus, coliforms Debridement, flucloxacillin, then amoxycillin-clavulanic acid Resolved Spider bite, abscess debrided, C. violaceum also present with S. aureus
18 F 2015 15 Blood Skin wound, bacteremia, liver abscess Group B Streptococcus, S. aureus Meropenem 2 weeks, ciprofloxacin, doxycycline 4 weeks Resolved Liver abscesses and septicemia, required prolonged intensive care unit admission

F = female; M = male; SSTI = skin and soft tissue infection.

Table 4.

Clinical features of patients with Chromobacterium violaceum considered incidental or minor in nature

Case number Sex Diagnosis year Age at diagnosis Site of isolate Mixed culture Therapy for admission diagnosis Outcome Notes
1 F 2004 33 Sputum Oral flora, yeast, Pseudomonas Piperacillin–tazobactam for 4 days Resolved Patient in hospital after a motor vehicle accident. Chromobacterium violaceum noted on sputum, thought to be incidental
2 M 2006 53 Sputum Chryseobacterium sp., Stenotrophomonas sp., yeast Ceftazidime 4 weeks. Co-trimoxazole 2–3 months for melioidosis Resolved Patient had disseminated melioidosis with abscesses in prostate and spleen. Incidental C. violaceum in feces
3 F 2006 5 Feces Metronidazole 3 days Resolved Patient being investigated for chronic colitis. Chromobacterium violaceum in feces was felt to be incidental
4 F 2009 15 Skin Group A Streptococcus Flucloxacillin 4 weeks Resolved Septic laceration left leg, resolved with therapy for group A Streptococcus. No therapy for C. violaceum
5 M 2011 54 Lower limb Dicloxacillin 10 days Resolved Admitted with knee cellulitis. This resolved with 48 hours antibiotics before the swab result became available
6 M 2013 1 Feces Flucloxacillin and co-trimoxazole 12 days in total Resolved Incidental fecal finding, culture performed for inpatient diarrhea. Patient admitted with facial abscess
7 F 2013 64 Sputum Not listed Nil Resolved Exacerbation of severe chronic pulmonary disease. Chromobacterium violaceum in sputum, not treated, the exacerbation resolved
8 F 2013 4 Feces Nil Resolved Self-limiting diarrhea in both patient and her sister
9 F 2013 64 Skin Cutaneous flora, mixed coliforms Nil Resolved Chronic calf wound for 2 months. Chromobacterium violaceum detected on a wound swab (not present on earlier swabs) and not treated
10 F 2014 1 Feces One dose of ceftriaxone before detection of bacteria Resolved Admitted after a 9-day febrile illness with diarrhea and an irritable hip, spontaneous resolution of diarrhea

F = female; M = male.

Susceptibilities of C. violaceum are presented in Table 5. All isolates had inferred susceptibility to ciprofloxacin, gentamicin, and meropenem. Minimum inhibitory concentration to ciprofloxacin was 0.012 mg/L for three isolates. Susceptibility to other antimicrobials, including ceftazidime (30%), amikacin (87.6%), tobramycin (75%), and co-trimoxazole (TMP-SMX) (88.9%) was found, though the overall numbers of isolates tested was small.

Table 5.

Chromobacterium violaceum antimicrobial susceptibility results

Antibiotic C. violaceum
Isolates tested (% susceptible)
Amikacin 8 (87.6)
Ampicillin 6 (0)
Amoxycillin–clavulanate 7 (0)
Ceftriaxone 5 (20)
Ceftazidime 10 (30)
Cephazolin 4 (0)
Ciprofloxacin 13 (100)
Cefepime 4 (100)
Gentamicin 13 (100)
Meropenem 9 (100)
Piperacillin–tazobactam 6 (84)
Ticarcillin–clavulanate 9 (22)
Tobramycin 8 (75)
Co-trimoxazole 9 (88.9)

Comparison data with the other VACS organisms is presented in Table 6. These organisms were isolated from patients from the same geographic location, in the same period and are all associated with tropical waterborne infections.

Table 6.

Comparison of demographic and clinical details Chromobacterium violaceum to other VACS organisms

C. violaceum Aeromonas spp.* Vibrio spp.* Shewanella spp.*
No. of bacterial isolates 28 312 71 61
Sex
 Males  (% of total) 13 (46) 203 (68) 47 (77) 51 (84)
Age
 0–15 8 (28.6) 27 (9) 8 (13) 2 (3)
 16–60 14 (50) 223 (74) 43 (70) 51 (84)
 > 60 6 (21.4) 50 (17) 10 (16) 8 (13)
Site of isolation (%)
 Skin and  soft tissue 12 (42.9) 260 (83) 52 (73) 50 (82)
 Blood 2 (7.1) 11 (3.5) 7 (9.9) 6 (9.8)
 Feces 4 (14.3) 16 (5.1) 6 (8.5) 0 (0)
 Respiratory 6 (21.4) 4 (1.3) 2 (2.8) 4 (6.6)
 Peritoneal 0 (0) 3 (1.0) 1 (1.4) 0 (0)
 Bile 0 (0) 2 (0.6) 0 (0) 0 (0)
 Bone 0 (0) 1 (0.3) 0 (0) 0 (0)
 Eye 0 (0) 6 (1.9) 1 (1.4) 1 (1.6)
 Urine 4 (14.3) 5 (1.6) 1 (1.4) 0 (0)
 Genital tract 0 (0) 3 (1.0) 0 (0) 0 (0)
 Ear 0 (0) 1 (0.3) 1 (1.4) 0 (0)
ICU admission (% of total) 7 (25) 13 (4.2) 3 (4.1) 4 (6.6)

ICU = intensive care unit; VACS = Vibrio spp., Aeromonas spp., C. violaceum, and Shewanella spp.

*

Isolate data from 2000 to 2013 inclusive, as reported by McAuliffe and others.1

Discussion

Our series of C. violaceum cases from the Top End of the Northern Territory provides some novel clinical insights into the nature of infection caused by this tropical and water-associated bacterium. We present a relatively large case series of C. violaceum infection from a single center collected over 15 years. Consistent with previous reports in the literature documented, most C. violaceum infections manifested as SSTI with exposure of wounds to environmental water or soil.

In comparison with other waterborne tropical VACS organisms, C. violaceum epidemiology in the Northern Territory differs significantly with respect to sex, age, and site of isolation compared with the other organisms.1 Chromobacterium violaceum patients were more evenly matched for sex (M:F ratio 0.85:1 versus 2:1), infections occurred more commonly in children < 15 years of age (28.6% versus 8.3%) and isolates from feces (14.3% versus 5.0%), respiratory samples (21.4% versus 2.2%), and urine (14.3% versus 1.4%) was more frequent, compared with the pooled results of the other three VACS organisms, respectively.1

Chromobacterium violaceum was also more commonly isolated from patients in ICU (seven cases, 25%) than patients with Vibrio spp. (three cases, 4.1%), Aeromonas spp. (13 cases, 4.2%), or Shewanella spp. (four cases, 6.6%) (for all P < 0.05), supporting the potential seriousness and virulence of the organism.1

In contrast to previous case series, which have relied heavily on clinical reporting of notable cases, we reviewed all laboratory isolates of C. violaceum in one location. This resulted in the identification of 10 cases (35.7%) that were not associated with clinical disease, demonstrating a role of C. violaceum in asymptomatic colonization of humans. Previous reports of asymptomatic infection are rare.15

Severe illness due to C. violaceum was frequent (25%), but the overall mortality rate in this series was small (7.1%) compared with previous reviews that have reported mortality of 53%.3 Potential causes of the reduced mortality include 1) C. violaceum is a relatively rare infection with only 154 cases reported, and therefore published case reports tend to favor serious infection, over more mild disease, as series from one location are not common; 2) It is not clear what determines the clinical disease and virulence in C. violaceum. Host risk factors such as CGD and glucose-6-phosphate dehydrogenase (G6PD) deficiency exist, but the many cases have been reported in immunocompetent patients. Microbial factors may be more significant. The pigment violacein has been related to cytotoxic activity; however, non-pigmented strains have been isolated with similar clinical severity.27 It is possible that there are strain differences with respect to virulence factors,28 postulated to be related to elevated levels of superoxide dismutase and catalase. Potentially, strains from both hemispheres and different disease manifestations could be compared by whole-genome sequencing as a next step. There is a precedent with other tropical water-associated bacteria such as Burkholderia pseudomallei having geographic strain differences29; or 3) As the Top End of the Northern Territory is an endemic zone for B. pseudomallei, the bacteria that causes melioidosis, protocols for sepsis include the early empiric use of meropenem. These measures have improved outcomes in patients presenting with septic presentations of melioidosis,30 and our low C. violaceum mortality may be an unexpected side benefit. Meropenem usually has excellent activity against C. violaceum and may explain the lower mortality seen.

The limitations of this study, by its retrospective nature, were the inability to have formal G6PD and CGD testing performed on the patient group. In future, more formal immune function and G6PD screening should be considered, particularly in pediatric patients.

The findings of this case review confirm that C. violaceum is a rare human pathogen, with 28 clinical isolates identified over 15 years in a tropical setting. This pathogen has the potential to cause severe and fatal disease. However, the increased frequency of asymptomatic colonization, and less severe clinical spectrum of disease reported, suggest that in the endemic setting, C. violaceum may not be as pathogenic as previously thought. Early targeted antibiotic therapy and early sepsis recognition may be factors associated with improved outcomes.

ACKNOWLEDGMENTS

We thank Laboratory staff of the Top End public health laboratories.

Footnotes

Authors' addresses: Yi dan Lin, Department of Infectious Diseases, Royal Darwin Hospital, Darwin, Australia, E-mail: yidanl@gmail.com. Suman S. Majumdar, Centre for International Health, Burnet Institute, Victoria, Australia, E-mail: suman.majumdar@burnet.edu.au. Jann Hennessy and Robert W. Baird, Department of Microbiology, Royal Darwin Hospital, Darwin, Australia, E-mails: jann.hennessy@nt.gov.au and rob.baird@nt.gov.au.

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