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. 2015 Nov 29;17(2):377–389. doi: 10.1093/biostatistics/kxv048

Spatial measurement error and correction by spatial SIMEX in linear regression models when using predicted air pollution exposures

Stacey E Alexeeff 1,*, Raymond J Carroll 2, Brent Coull 3
PMCID: PMC4834950  PMID: 26621845

Abstract

Spatial modeling of air pollution exposures is widespread in air pollution epidemiology research as a way to improve exposure assessment. However, there are key sources of exposure model uncertainty when air pollution is modeled, including estimation error and model misspecification. We examine the use of predicted air pollution levels in linear health effect models under a measurement error framework. For the prediction of air pollution exposures, we consider a universal Kriging framework, which may include land-use regression terms in the mean function and a spatial covariance structure for the residuals. We derive the bias induced by estimation error and by model misspecification in the exposure model, and we find that a misspecified exposure model can induce asymptotic bias in the effect estimate of air pollution on health. We propose a new spatial simulation extrapolation (SIMEX) procedure, and we demonstrate that the procedure has good performance in correcting this asymptotic bias. We illustrate spatial SIMEX in a study of air pollution and birthweight in Massachusetts.

Keywords: Air pollution, Birthweight, Environmental epidemiology, Kriging, Model uncertainty, Spatial model

1. Introduction

There is strong evidence in epidemiological studies that both short-term and long-term exposures to air pollution are related to cardiovascular morbidity and mortality (Brook and others, 2010). Spatial modeling of air pollution levels using Kriging methods is now commonplace in air pollution epidemiology research. Existing pollution monitoring networks are used to collect data on regional air pollution concentrations, and spatial prediction models are then used to estimate location-specific exposures at the home address of each subject in a study. However, the regional heterogeneity of air pollution may be difficult to characterize. For example, ambient levels of Inline graphic have been shown to vary considerably within a given city region, in part due to traffic sources (Brauer and others, 2003; Clougherty and others, 2008).

This measurement error setting where the set of locations in the health analysis does not match the set of locations where exposures are observed is called spatial misalignment (Gryparis and others, 2009). Spatially predicted exposures are often used directly as the individual-specific exposure estimates for the health analysis. This approach treats the predicted exposures as observed, without accounting for the uncertainty in the prediction process. Ignoring measurement error can lead to biased health effect estimates and overstated confidence in the resulting risk assessments (Carroll and others, 2006). The issue of spatial misalignment measurement error in air pollution epidemiology has received considerable attention in a recent literature (Szpiro and others, 2011; Szpiro and Paciorek, 2013; Madsen and others, 2008; Lopiano and others, 2013; Gryparis and others, 2009; Peng and Bell, 2010; Bergen and others, 2013; Chang and others, 2011). However, the role of spatial exposure model misspecification has not formally been investigated.

The work presented here adds to this existing literature in two ways. First, we explicitly evaluate the impact of model misspecification, whereas the majority of previous studies focus instead on the impact of uncertainty associated with estimation of unknown parameters in a known exposure model. In practice, model misspecification will always be an issue given the spatial–temporal complexity of pollution emissions. Second, we propose methods that can be implemented when the exposure prediction algorithm does not yield uncertainties for the exposure model parameter estimates. Examples of such approaches in the environmental science literature include a daily Kriging model implemented in ArcGIS (Liao and others, 2006) and multi-stage models or missing data imputation schemes that make it difficult to propagate the uncertainty in each stage through to the final exposure predictions (Kloog and others, 2012, 2014; Nordio and others, 2013).

This article investigates two factors of exposure estimation that may affect resulting health effect estimates: estimation error and model misspecification. In practice, spatial air pollution models are fit with sparse monitoring data. Hence, we examine the effects of estimation error in the Kriging model parameters under small sample size. In addition, the underlying exposure model that generates air pollution levels in any given region is not known. Thus, we investigate the impact of model misspecification in the spatial model by omitting a spatial covariate. To correct for bias in the health effect estimates, we introduce a spatial version of the simulation extrapolation (SIMEX) method. To our knowledge, our proposed spatial SIMEX procedure is the first treatment of SIMEX allowing for spatially correlated measurement errors.

The remainder of this paper is arranged as follows. In Section 2, we introduce our modeling framework with specific exposure models of interest. In Section 3, we analytically examine the bias for each exposure model and we derive the probability limits of the misspecified parameters. We propose a new spatial SIMEX correction method in Section 4 where correlated classical error is added to the exposure predictions to correct for bias. In Section 5, we present a simulation study to investigate bias and to demonstrate the performance of spatial SIMEX. We then illustrate the spatial SIMEX correction in a study of air pollution and birthweight in Section 6. We end with a concluding discussion in Section 7.

2. Spatial exposure models in air pollution and health studies

2.1. Model framework

Let the health effect model of interest be a simple linear regression model, Inline graphic, for each subject Inline graphic, where Inline graphic is a continuous health outcome, Inline graphic is the true unmeasured air pollution exposure at the home address of subject Inline graphic, and Inline graphic. Let Inline graphic be independent and identically distributed (i.i.d.) with mean 0 and variance Inline graphic. The goal of the analysis is to estimate Inline graphic, the parameter measuring the association between the health outcome and the air pollution exposure.

Let Inline graphic denote the Inline graphic-length vector of measured air pollution levels at Inline graphic monitor sites spread throughout the same geographic region, where Inline graphic. We assume spatial misalignment, where the Inline graphic subject address locations do not match the Inline graphic monitor locations. Suppose the true pollution process, Inline graphic, is generated by a Gaussian Random Field, and that the realizations of this process take a parametric form. Specifically, denote the length Inline graphic vector of parameters for the mean model as Inline graphic, denote the length Inline graphic vector of parameters for the variance model as Inline graphic, and let Inline graphic. Then a realization of one surface follows:

2.1. (2.1)

The Kriging estimator for Inline graphic conditional on the observed monitor data Inline graphic is defined as

2.1. (2.2)

We now consider two spatial exposure model scenarios in this study.

Scenario I: Universal Kriging model. Consider equation (2.2) and assume that Inline graphic follows a Matérn covariance with parameters Inline graphic for range Inline graphic, smoothness Inline graphic, and variance Inline graphic (see Appendix of the supplementary material available at Biostatistics online for explicit covariance function). Universal Kriging assumes a spatial correlation structure for the variance, and allows the mean model to depend linearly on a set of covariates or to be constant. For the mean model we consider two scenarios. First, we consider a constant mean model, Inline graphic in Scenario IA. Second, we consider a mean model that depends linearly on covariates, Inline graphic, where we assume that covariates, Inline graphic, Inline graphic represent spatially varying land-use characteristics. This type of model is often called a “land-use regression” model, which we refer to as Scenario 1B. Land-use covariates for air pollution models include measures such as percentages of residential land, greenspace, industry, population size, distances to major roads, and traffic intensity (Ross and others, 2007).

Scenario II: Misspecified universal Kriging model. Scenario II considers a misspecified universal Kriging model. We assume that the true exposure is generated under the universal Kriging model defined above, and that the fitted exposure model is misspecified by omitting Inline graphic. Thus, the misspecified exposure model is

2.1. (2.3)

where Inline graphic, Inline graphic, and Inline graphic, with the subscript Inline graphic denoting the naive parameters from the misspecified model. Here, we also assume that Inline graphic and Inline graphic are each spatially correlated, generated from their own Gaussian Processes.

2.2. Decomposition into Berkson and classical error components

We now review and extend the decomposition of exposure measurement error into Berkson and Classical components for each of these three scenarios. The mean and variance parameters can be estimated jointly via maximum likelihood. Let Inline graphic be the vector of maximum likelihood estimates of Inline graphic for the true model and let Inline graphic be the vector of maximum likelihood estimates of Inline graphic in the naive misspecified model. A general measurement error framework can be used to characterize the difference between the true unobserved exposures Inline graphic and the predicted exposures Inline graphic. The decomposition of errors into Berkson and classical measurement error components follows the development of Gryparis and others (2009) and Szpiro and others (2011), where Gryparis and others (2009) consider a Bayesian Gaussian Process model with constant mean, and Szpiro and others (2011) consider a universal Kriging model where the mean depends on several spatial covariates. We now extend this viewpoint to our models of interest defined in Section 2.1. For Scenario I, the predicted exposures, Inline graphic, have the form

2.2. (2.4)

The error Inline graphic can be decomposed into two components. The Berkson error component, Inline graphic, represents the difference between the true measurements and the expectation of Inline graphic conditional on Inline graphic. The classical error component, Inline graphic, represents the difference between the true model and the estimated model, and we refer to this classical error as estimation error. In Scenario I, this Kriging estimator fit under the correct model is the best linear unbiased predictor (Cressie, 1993).

For Scenario II, the predicted exposures, Inline graphic, have the form

2.2. (2.5)

Decomposing the error into Berkson and classical components,

2.2. (2.6)

Thus, there are two classical measurement error components. The first is attributed to choosing the incorrect model, and the second is due purely to estimation error of the parameters.

3. Analysis of bias in health effect estimates induced by exposure models

Now, with the measurement error framework established, we study the impact of measurement error in the predicted exposures on bias of the coefficient Inline graphic representing the association between air pollution exposure and the health outcome. First, we investigate bias in the case of estimation error only in Scenario I analytically, focusing on the small-sample bias properties not previously addressed in other studies. Next, we study the asymptotic bias in the case of model misspecification error in Scenario II by deriving the probability limits of the MLEs in the misspecified model and deriving the particular form of the classical error variance. Later, in Section 5, we will complement this analysis with a simulation study.

3.1. Bias analysis for Scenario I

To study the estimation error bias in Scenario I, we introduce notation for the least squares estimators. Without loss of generality we assume centered variables. Let Inline graphic be the function for the least squares estimate of Inline graphic given monitoring data, spatial covariates, and observed health outcomes. Our notation explicitly shows the dependence on Inline graphic and Inline graphic, and implicitly also depends on Inline graphic. Specifically, define

3.1. (3.1)

for Inline graphic vector Inline graphic, Inline graphic matrix Inline graphic, and Inline graphic vector Inline graphic. Then let Inline graphic denote the least squares estimate of Inline graphic based on the exposure model using the true parameters Inline graphic, so Inline graphic. Similarly, let Inline graphic denote the least squares estimate of Inline graphic based on the exposure model using the estimated exposure model parameters Inline graphic, so Inline graphic.

First, we note that the Berkson error component does not induce any bias in the estimate of Inline graphic. Hence, any bias in the estimator comes from the classical error component. Using a second-order Taylor expansion of Inline graphic around Inline graphic the approximate bias of Inline graphic is

3.1. (3.2)

where Inline graphic and Inline graphic. Equation (3.2) illustrates that when the number of monitors Inline graphic is large, then Inline graphic, resulting in an asymptotically unbiased estimator for Inline graphic. However, following a similar argument to Zimmerman and Cressie (1992), Jensen's inequality says that if Inline graphic is strictly concave, then

3.1. (3.3)

Thus, in practice when Inline graphic is small, this bias that disappears asymptotically will be present. Moreover, the Jensen's inequality argument applies even when the covariance parameters are unbiased, Inline graphic. Similarly, if Inline graphic is strictly convex, the resulting bias is upward and only linearity of Inline graphic yields an unbiased estimator. Generally, Inline graphic is a nonlinear function of the exposure model covariance parameters, and its form depends on the spatial covariance function, the distances of the monitors from each other, and the distances of the subject addresses from the monitors. Figure S1 of the supplementary material available at Biostatistics online shows an example of a particular choice of covariance matrix and set of covariates where Inline graphic as a concave function, and its scale suggests that the bias may be small. Thus, in practice, we expect small sample bias in Inline graphic due to a small number of monitors Inline graphic. We investigate this small sample bias via simulations in Section 5.

3.2. Bias analysis for Scenario II

Scenario II contains the additional component of error due to model misspecification, Inline graphic. To understand the bias induced by this component, we first consider the asymptotic behavior of the naive model parameter estimates. Following Wang and others (1998), the MLE's Inline graphic will be the solutions to the score equations based on the Multivariate Normal likelihood for Equation (2.3), and thus will converge in probability to the solutions of the following equations:

3.2. (3.4)
3.2. (3.5)

where Inline graphic is the Inline graphic subset of spatial covariates in the misspecified model, Inline graphic, and Inline graphic indexes the variance parameters. Solving these for Inline graphic yields the asymptotic relationship between Inline graphic and Inline graphic, as shown in Appendix of the supplementary material available at Biostatistics online. Closed-form solutions exist for Inline graphic, but for the variance parameters we derive equations which can only be solved numerically. In general, the solutions depend on the joint distribution of the correlated spatial covariates.

4. SIMEX for correlated Berkson and classical errors

The SIMEX method has been developed as a flexible method to correct for the effect of classical measurement errors on the estimation of a parameter of interest (Cook and Stefanski, 1994). SIMEX is a functional method which uses resampling techniques and places minimal assumptions on the underlying distribution of the exposures. SIMEX has two steps: a simulation (SIM) step, where simulated error is added to the mismeasured exposures in increasing amounts, and an extrapolation (EX) step, where a trend is fit to the mean of the parameter estimates over the increasing error levels and extrapolated back to the case of no error. It has been suggested that SIMEX may be suitable for several exposures with correlated classical errors when the correlations of the errors are known or estimable (Carroll and others, 2006). We now present the spatial SIMEX procedure, an extension of SIMEX that allows the classical measurement errors to be correlated over space.

4.1. Spatial SIMEX procedure

The spatial SIMEX procedure is implemented as follows. Let Inline graphic and Inline graphic be given positive integers, and let Inline graphic be an increasing sequence of non-negative numbers starting with Inline graphic.

Simulation step. For each Inline graphic and Inline graphic, we generate a pseudo-dataset of exposures, Inline graphic, where Inline graphic. Adding the error creates pseudo-datasets equal to the unbiased exposure plus an error component with a covariance of Inline graphic. This allows exploration of how the health effect parameter is biased as a function of increasing measurement error variance. For each Inline graphic and Inline graphic, we estimate the parameter of interest Inline graphic by fitting the linear health model using the pseudo-dataset. Thus, Inline graphic estimates the association between the pseudo-exposures Inline graphic and the outcome Inline graphic.

Extrapolation step. We obtain an estimate of Inline graphic for each Inline graphic by averaging over the Inline graphic simulations, Inline graphic. We then fit a trend to Inline graphic versus Inline graphic using a linear or quadratic model. The predicted value of this trend at Inline graphic is the spatial SIMEX corrected estimate of the parameter, Inline graphic, estimating the health effect parameter under no measurement error.

Spatial SIMEX can be implemented with a bootstrap standard error estimate, following the same general bootstrap approach used for one-dimensional SIMEX (Carroll and others, 2006). To implement the bootstrap standard error, we first estimate Inline graphic. Then, for Inline graphic bootstrap samples: (i) resample monitor locations with replacement, (ii) fit the initial exposure model to the new sample of monitoring data, (iii) predict the exposures at the health locations, and (iv) repeat the entire SIMEX procedure using these new predictions to obtain Inline graphic. The standard error estimate is then computed by the standard deviation of the Inline graphic bootstrap SIMEX estimates, Inline graphic.

In general, the asymptotic results of and Cook and Stefanski (1994) for the unbiasedness of the point estimate apply when (i) the bias in the naive estimator is a continuous function of the measurement error variance, (ii) the measurement error variance is known, and (iii) the true extrapolant function based on the bias function is known. In practice, the measurement error variance and the true extrapolant function are often unknown. Still, even an approximate exrapolant function can help reduce bias (Carroll and others, 2006). In addition, the degree of fit to the error-inflated parameters can be assessed, and if the trend in bias is unclear, the number of SIMEX samples Inline graphic can be increased as well as the number of Inline graphic's, Inline graphic. The next subsection discusses how to estimate the classical measurement error variance.

4.2. Estimation of spatial measurement error variance parameters

The simulation step of spatial SIMEX relies on generating random samples of error from the multivariate classical error distribution. Based on the derivations in our bias analysis of Section 3, the only component of error that leads to asymptotic bias is the model misspecification component of classical error. Thus, only the model misspecification variance is needed to generate these pseudo-datasets in the SIMEX procedure to asymptotically correct for the bias. Derivations in the supplementary material available at Biostatistics online show that the classical error due to model misspecification has the distribution Inline graphic, where

4.2. (4.1)

Equation (4.1) shows that Inline graphic depends on the spatial covariances of the exposures under both the true parameters and the naive parameters as well as the spatial covariance of the unobserved spatial covariate Inline graphic. In practice, these spatial covariances would not be known and thus Inline graphic would not be known. In that case, Inline graphic can be approximated by using external validation data from held-out monitors. We fit the spatial exposure model and predict the exposure at the held-out monitor locations. Then, we compute the difference between the predicted and observed exposures to obtain the residuals at the held-out monitor locations. We fit a spatial model to the set of residuals to estimate the total spatial covariance. In practice, we use a Matérn covariance structure for the spatial model of the residuals.

One key issue which has been discussed in previous studies is the non-identifiability of the proportion of measurement error that is Berkson versus classical in models with both Berkson and classical measurement error (Mallick and others, 2002; Li and others, 2007). While external validation data allow the estimation of the total error variance, the relative proportions of Berkson and classical errors cannot be determined. These previous studies consider the case where both the Berkson errors and the classical errors are assumed to be i.i.d. normal in one dimension. To deal with the identifiability issue in a practical application, the authors perform sensitivity analyses regarding the percentage of variance assumed to be classical versus Berkson. We take a similar approach, estimating the total spatial covariance Inline graphic by using external validation data. We then compute Inline graphic, where Inline graphic represents the proportion of the total spatial error attributable to classical error, with the remaining error as Berkson.

5. Simulation study

We conduct a simulation study to explore the degree of bias for the models described in Section 2. Scenario IA assumes a constant mean model, and Scenario IB assumes that the mean depends on two spatial covariates. For the spatially correlated residuals, we use a Matérn covariance function, with range Inline graphic and variance Inline graphic. We consider a smooth surface with smoothness Inline graphic, and a rough surface with smoothness Inline graphic, with examples shown in Figure S2 of the supplementary material available at Biostatistics online. Note that the rough surface does not satisfy the smoothness conditions needed in our Taylor expansion because it only has first derivatives. To generate the model misspecification scenario, we use the exposure model of Scenario IB with two spatial covariates and smooth residuals, and then fit the exposure model omitting the second spatial covariate. Our first set of simulations assumes that Inline graphic is known, and in later simulations we relax this assumption.

Specifically, we assume that one-third of the available monitors are held-out as a validation dataset, and we estimate Inline graphic using that data as described in Section 4. The estimate of Inline graphic also depends on the assumed proportion of classical to Berkson error. Most of the error will be classical, but the exact percentage is not identifiable. We choose classical error proportions of Inline graphic as realistic approximations, and we look at extremes of Inline graphic to examine the robustness of the spatial SIMEX estimator to the choice of Inline graphic.

Simulation results for Scenario I are given in Table 1. For the smooth surface, we observe negligible bias even for small numbers of monitors. The rough surface is particularly difficult to estimate because we use a small number of monitors to estimate the form of a rough surface. We see a small amount of bias in the case of Scenario IA with only 20 monitors. Interestingly, the direction of this bias here is upward, which may be an artifact of using a particularly sparse dataset and a rough surface. As expected, the Berkson error underestimates the standard error, leading to insufficient coverage of the CIs.

Table 1.

Simulation results for smooth and rough exposure surfaces for Scenario I with different number of monitors Inline graphic

Scenario m Exposure Bias Empirical SE Model SE MSE Coverage
IA Smooth 20 True Inline graphic 0.001 0.082 0.076 0.007 94.200
IA Smooth 20 Inline graphic Inline graphic0.003 0.108 0.078 0.012 86.400
IA Smooth 20 Inline graphic 0.004 0.111 0.080 0.012 85.200
IA Smooth 40 True Inline graphic Inline graphic0.000 0.086 0.076 0.007 94.000
IA Smooth 40 Inline graphic 0.001 0.088 0.076 0.008 93.000
IA Smooth 40 Inline graphic 0.002 0.088 0.076 0.008 93.000
IB Smooth 20 True Inline graphic 0.001 0.044 0.043 0.002 94.990
IB Smooth 20 Inline graphic 0.002 0.055 0.044 0.003 89.379
IB Smooth 20 Inline graphic 0.002 0.059 0.044 0.003 87.976
IB Smooth 40 True Inline graphic 0.002 0.043 0.043 0.002 94.400
IB Smooth 40 Inline graphic 0.003 0.044 0.043 0.002 93.600
IB Smooth 40 Inline graphic 0.003 0.045 0.043 0.002 93.800
IA Rough 20 True Inline graphic Inline graphic0.001 0.057 0.055 0.003 93.865
IA Rough 20 Inline graphic Inline graphic0.007 0.179 0.080 0.032 63.190
IA Rough 20 Inline graphic 0.058 0.220 0.089 0.052 57.055
IA Rough 40 True Inline graphic Inline graphic0.000 0.057 0.054 0.003 94.990
IA Rough 40 Inline graphic 0.002 0.104 0.067 0.011 80.962
IA Rough 40 Inline graphic 0.024 0.114 0.070 0.014 78.557
IB Rough 20 True Inline graphic 0.002 0.038 0.038 0.001 94.400
IB Rough 20 Inline graphic 0.002 0.040 0.038 0.002 93.600
IB Rough 20 Inline graphic 0.002 0.042 0.038 0.002 92.200
IB Rough 40 True Inline graphic 0.002 0.038 0.038 0.001 95.000
IB Rough 40 Inline graphic 0.002 0.038 0.038 0.001 95.000
IB Rough 40 Inline graphic 0.002 0.038 0.038 0.001 94.600

Table 2 gives simulation results for Scenario II. We observe substantial bias toward the null in the health effect parameter. Results show that spatial SIMEX corrects this bias approximately. The two extrapolation functions perform differently, where the linear extrapolation function under corrects the bias. In the simulation step of the spatial SIMEX procedure, we use the derived covariance matrix with true parameter values to sample random error to generate the pseudo-datasets. We implement the bootstrap standard error as described in Section 4.3 using 200 bootstrap resampling steps.

Table 2.

Simulation results for Scenario II, misspecified exposure model, and correction by spatial SIMEX when spatial measurement error variance is known

Scenario m Exposure Bias Empirical SE Model SE MSE Coverage
II 50 True Inline graphic 0.000 0.036 0.034 0.001 93.6
II 50 Inline graphic 0.000 0.036 0.034 0.001 93.6
II 50 Inline graphic Inline graphic0.203 0.182 0.039 0.074 22.2
II 50 Spatial SIMEX, linear Inline graphic0.072 0.211 0.241 0.050 90.6
II 50 Spatial SIMEX, quad 0.026 0.254 0.285 0.065 91.9

Table 3 gives the results for the simulations where Inline graphic is estimated using the available monitoring data. We find that the spatial SIMEX procedure still works well even when approximating Inline graphic. The best performance is seen when Inline graphic is 0.80. In the extreme case assuming Inline graphic classical error, the spatial SIMEX procedure using the quadratic extrapolation appears to over-correct the bias. In the other extreme case assuming Inline graphic classical error, both the linear and quadratic extrapolations under-correct the bias. Although there is sensitivity to the choice of Inline graphic, all the spatial SIMEX estimates noticeably reduce the bias. There is slight under-coverage in the Inline graphic CI estimates across all choices of Inline graphic.

Table 3.

Simulation results for Scenario II, misspecified exposure model, and correction by spatial SIMEX when spatial measurement error variance parameters are estimated, for different proportions, Inline graphic of classical error

Scenario Inline graphic Exposure Bias Empirical SE Model SE MSE Coverage
II True Inline graphic 0.001 0.036 0.034 0.001 93.6
II Inline graphic 0.001 0.036 0.034 0.001 93.6
II Inline graphic Inline graphic0.200 0.180 0.039 0.072 22.4
II 1.00 Spatial SIMEX, linear Inline graphic0.068 0.213 0.228 0.050 91.3
II 1.00 Spatial SIMEX, quadratic 0.067 0.322 0.336 0.108 87.2
II 0.90 Spatial SIMEX, linear Inline graphic0.075 0.211 0.228 0.050 91.1
II 0.90 Spatial SIMEX, quadratic 0.044 0.308 0.331 0.097 87.8
II 0.80 Spatial SIMEX, linear Inline graphic0.076 0.208 0.227 0.049 91.6
II 0.80 Spatial SIMEX, quadratic 0.028 0.294 0.324 0.087 89.1
II 0.50 Spatial SIMEX, linear Inline graphic0.112 0.200 0.225 0.053 89.6
II 0.50 Spatial SIMEX, quadratic Inline graphic0.058 0.247 0.304 0.064 91.3

In practice, the true exposure surface may not exhibit a Gaussian distribution. To explore the performance of spatial SIMEX when the Gaussian assumption is not satisfied, we considered simulation settings where the spatial covariates were generated from spatial log–normal distributions, with results given in Table S1 of the supplementary material available at Biostatistics online. Overall, results are as expected, where spatial SIMEX corrects adequately for bias or may over-correct, yielding effect estimates that could have slight upward bias. The standard errors in this scenario are over-estimated, leading to CIs that are wider than necessary and coverage Inline graphic99%.

6. Data Example: Association between air pollution and low birthweight

We applied our spatial SIMEX method to a study of birthweight and particulate matter exposure during pregnancy in Massachusetts. The objective of the study was to estimate the association between birthweight and PMInline graphic exposure during the second and third trimesters. The study population included all singleton live births in Massachusetts from the Massachusetts Birth Registry during 2008 (January 1 to December 31), a total of 70 340 births. Individual-level data on the mother and baby come from the Massachusetts Birth Registry. Confounders in the health model include maternal age, gestational age, number of cigarettes smoked during and before pregnancy, chronic conditions of mother or conditions of pregnancy (lung disease, hypertension, gestational diabetes, and non-gestational diabetes), and socioeconomic measures (mother's race, mother's years of education, and the Kotelchuck index of adequacy of prenatal care utilization). Area-level socioeconomic status is controlled by census-tract median household income using data from the United States Census Bureau of 2000 for each census tract in Massachusetts. These covariates are consistent with the published literature on birthweight and particulate matter (Dadvand and others, 2013). Some studies also adjust for co-pollutant exposures, such as ozone, although the need for this may vary by region, where studies in the northeast have found similar effect sizes after this adjustment (Bell and others, 2007).

PMInline graphic measurements during 2007 and 2008 were obtained from 40 monitoring sites in Massachusetts as part of the Environmental Protection Agency and Interagency Monitoring of Protected Visual Environments monitoring networks (Kloog and others, 2011). The residential address of each mother at a time of birth was geocoded as described in Kloog and others (2012a). To predict PMInline graphic at the mother's home address for each birth, we assume a universal Kriging model with Matérn residuals. The mean function for the Kriging model includes a linear trend for three land-use covariates: distance to primary highway, distance to known particulate matter emission source, and average traffic density, as described in Kloog and others (2011). Separate models are fit for each month using the monthly average PMInline graphic concentrations at the monitoring sites during 2007 and 2008. Exposures during the second and third trimesters of pregnancy are estimated by averaging the monthly PMInline graphic concentrations prior to the delivery date.

We fit linear health effect models for each exposure of interest, second trimester PMInline graphic and third trimester PMInline graphic, adjusting for confounders. This model yields a naive effect estimate that is not corrected for measurement error. We then apply our proposed spatial SIMEX correction method using a quadratic extrapolation function and assuming that Inline graphic. Further description of our implementation of spatial SIMEX for this application is given in the supplementary material available at Biostatistics online.

We find negative associations between birthweight and each PMInline graphic exposure without correcting for measurement error, and the estimated effect size is larger when we apply spatial SIMEX. Specifically, the change in birthweight per Inline graphic second trimester PMInline graphic exposure is estimated to be Inline graphic5.04 g, Inline graphic CI Inline graphic, without accounting for measurement error. When corrected by spatial SIMEX, this association is estimated to be Inline graphic7.90 g per Inline graphic PMInline graphic exposure in the second trimester, Inline graphic CI Inline graphic. For the third trimester, the change in birthweight per Inline graphic PMInline graphic is estimated to be Inline graphic3.49 g, Inline graphic CI Inline graphic, without any measurement error correction. Applying spatial SIMEX, we estimate an association of Inline graphic4.91 g per Inline graphic third trimester PMInline graphic exposure, Inline graphic CI Inline graphic. Figure S4 and Table S2 of the supplementary material available at Biostatistics online, we report results from sensitivity analyses varying the assumed percentage of classical error and using both linear and quadratic extrapolation functions.

7. Discussion and conclusions

In this paper, we have conducted a bias analysis of several key scenarios in exposure modeling of air pollution. We have shown that when the exposure model is misspecified by omitting an important covariate, notable downward bias in the health effect estimate can occur in addition to the underestimation of the standard errors. We have proposed a new spatial SIMEX approach to adjust for bias and standard error estimation in the presence of model misspecification. We shown that this bias due to exposure model misspecification can be approximately corrected by spatial SIMEX. We have also shown analytically and via simulation the presence of small-sample bias due to estimation error in the case of a correctly specified exposure model, although the degree of bias in practice is typically negligible. Hence, this work has demonstrated that with respect to bias, model misspecification is a much bigger problem than parameter estimation.

Previous research in this area has suggested that the plug-in estimator typically induces little bias, and authors have advocated for using this estimator for the point estimate and adjusting the standard errors to account for the additional variability in using the exposure predictions (Szpiro and others, 2011; Madsen and others, 2008; Lopiano and others, 2013; Gryparis and others, 2009). However, those papers investigate bias in simulation studies primarily by fitting the correct exposure model used to generate the data. Our findings in Section 3 for the bias of exposure model Scenario I are consistent with these previous studies, as we also found in simulations that the degree of bias is small when the correct exposure model is specified. Our findings are also consistent with a recent study investigating exposure model misspecification via simulation, which illustrated real examples of poor-fitting Kriging exposure models that induced bias in health effect estimates (Alexeeff and others, 2014). In practice, the underlying exposure model that generates air pollution levels in any given region is not exactly known. In addition, current approaches for correcting the standard errors of estimates also rely on the assumption that the exposure model is correctly specified (Szpiro and others, 2011; Madsen and others, 2008). We have approached this problem using both analytical methods and simulation studies, and we have presented a more thorough bias analysis than what has been considered in previous work. In particular, we have extended existing work to the case of model misspecification, which is important since exposure models are typically complex and no single statistical model is likely to be correct.

This work also points to practical considerations in the implementation of spatial SIMEX. As in other SIMEX procedures, the simulated re-measurements are generated using a known classical error variance. In Section 3, we derived the particular form of the classical error variance for Scenario II, but in practice the exact classical error variance would not be known. External validation data are typically needed to estimate the measurement error variance, as we hold out a set of monitors in our birthweight application in Section 6. However, external validation data only allow the estimation of the total spatial error, while the relative proportions of Berkson and classical errors are not identifiable (Mallick and others, 2002; Li and others, 2007). We follow the approach of Li and others (2007) by varying our choice of Inline graphic in sensitivity analyses.

Our work points several areas of future research. First, we suggest further investigation of model misspecification in land-use regression and Kriging models for air pollution exposure, for example the case of omitting a key confounder in the exposure model. Our work here considers only one misspecification scenario, which induces notable bias. Second, we suggest further study of the practical implementation of spatial SIMEX, including methods for estimating the classical error variance given the issue of identifiability, as well as the robustness of spatial SIMEX to incorrect estimation of the classical error variance.

One advantage of SIMEX is that the general methodology can be adapted to cases in which the measurement error biases cannot be derived in closed-form, including logistic regression and Poisson regression (Carroll and others, 2006). SIMEX can also be extended to the multi-pollutant setting in which more than one exposure covariate is measured with measurement error (Carroll and others, 2006). In the multi-pollutant case, we can use the same cross-validation procedure to estimate prediction errors for all pollutants at each location. We can then fit a covariance structure model for these spatially correlated multivariate errors, such as the Kronecker product of a multi-pollutant covariance matrix for prediction errors measured at the location and parametric (e.g. exponential) spatial correlation structures for predictions errors for a given pollutant measured at different locations. Therefore, our proposed spatial SIMEX approach would be applicable to the multi-pollutant setting as long as all the pollutants are jointly measured. In addition, SIMEX can be adapted when the measurement error itself follows a different form, for example multiplicative log-Gaussian errors (Eckert and others, 1997).

This work examines aspects of exposure modeling of air pollution for health effect studies and provides some insight into the role of estimation error and model misspecification in the estimation of health effects. Understanding these impacts when constructing land-use regression and Kriging models is of fundamental importance to studies of air pollution and health. In particular, these results should be taken into account when interpreting the results of air pollution epidemiology studies that use land-use regression and Kriging models for exposure estimation. The spatial SIMEX procedure provides one possible measurement error correction strategy which may be beneficial to correct for bias induced by model misspecification.

Supplementary material

Supplementary material is available at http://biostatistics.oxfordjournals.org.

Funding

This work was supported by USEPA grant 834798 and NIH grants from the National Institute of Environmental Health Sciences (R01-ES020871, T32-ES007142) and the National Cancer Institute (P01-CA134294). This publication's contents are solely the responsibility of the grantee and do not necessarily represent the official views of the US EPA. Carroll's research was supported by National Cancer Institute grant R37-CA057030.

Supplementary Material

Supplementary Data

Acknowledgments

Conflict of Interest: None declared.

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