(A) N-Terminal active site in the X-ray crystal structure
of the
ΔE162 OxDC/oxalate complex. Carbon atoms in the protein and
bound oxalate are colored green and cyan, respectively. The Co(II)
ion is rendered as a pink sphere. (B) Overlay of the active sites
of the Co(II)-substituted ΔE162 OxDC variant (C, green), WT
OxDC (C, purple) with the Glu162 side chain in the “closed”
orientation (PDB entry 1UW8), and WT OxDC (C, magenta) with the Glu162 side chain in the “open” orientation (PDB entry 1J58). Only the metal
from the Co(II)-substituted ΔE162 OxDC variant is shown for
the sake of clarity. (C) N-Terminal active site of WT OxDC (C and
Mn, purple) with oxalate (C, orange) modeled in a “side on”
conformation by placing the carboxylate oxygens in the two positions
occupied by waters (blue spheres) in the wild-type structure (PDB
entry 1UW8).
The steric clash with Glu162 is denoted by an orange line.
The oxygen atoms of metal-bound water molecules are rendered as red
spheres, and metal–ligand coordinate bonds are shown as black
dashed lines in all three images.