Table 1. Summary of chromosomal CNAs in LM200-#25 by SNP array analysis.
Chromosome Number | Copy Number | Position | Start Position | End Position | Length (bps) |
---|---|---|---|---|---|
2 | Amp | 2p24.3 | 16,112,059 | 16,374,530 | 262,471 |
2 | Amp | 2p16.3 - 2p11.2 | 48,874,201 | 83,960,470 | 35,086,269 |
5 | Del | 5q12.1 - 5q15 | 60,181,452 | 95,997,250 | 35,815,798 |
5 | Del | 5q15 - 5q35.3 | 96,133,485 | 180,693,128 | 84,559,643 |
7 | Del | 7p15.2 - 7p11.2 | 26,267,811 | 56,070,567 | 29,802,756 |
7 | Del | 7q21.13 - 7q21.2 | 90,400,492 | 91,667,757 | 1,267,265 |
7 | Del | 7q21.3 - 7q31.31 | 93,403,513 | 117,737,887 | 24,334,374 |
7 | Del | 7q32.1 - 7q36.3 | 127,700,973 | 159,119,487 | 31,418,514 |
8 | Del | 8p23.3 - 8q24.3 | 164,984 | 146,293,415 | 146,128,431 |
12 | Del | 12p13.33 - 12p11.22 | 191,619 | 28,788,116 | 28,596,497 |
12 | Del | 12p11.22 - 12p11.1 | 30,194,870 | 34,823,250 | 4,628,380 |
13 | Del | 13q11 - 13q34 | 19,058,717 | 115,103,530 | 96,044,813 |
14 | Amp | 14q31.1 | 82,396,465 | 82,542,289 | 145,824 |
16 | Del | 16q23.1 | 78,925,534 | 79,054,884 | 129,350 |
17 | Del | 17p13.3 - 17q25.3 | 8,547 | 81,051,008 | 81,042,461 |
21 | Del | 21q22.3 | 43,557,092 | 43,634,574 | 77,482 |
* Amp; amplification, Del; deletion