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Published in final edited form as: Gastric Cancer. 2014 Apr 21;18(2):280–287. doi: 10.1007/s10120-014-0370-2

Predictive value of CHFR and MLH1 methylation in human gastric cancer

Yazhuo Li 1,2, Yunsheng Yang 3, Youyong Lu 4, James G Herman 5, Malcolm V Brock 6, Po Zhao 7, Mingzhou Guo 8
PMCID: PMC4894312  NIHMSID: NIHMS788274  PMID: 24748501

Abstract

Background

Gastric carcinoma (GC) has one of the highest mortality rates of cancer diseases and has a high incidence rate in China. Palliative chemotherapy is the main treatment for advanced gastric cancer. It is necessary to compare the effectiveness and toxicities of different regimens. This study explores the possibility of methylation of DNA damage repair genes serving as a prognostic and chemo-sensitive marker in human gastric cancer.

Methods

The methylation status of five DNA damage repair genes (CHFR, FANCF, MGMT, MLH1, and RASSF1A) was detected by nested methylation-specific PCR in 102 paraffin-embedded gastric cancer samples. Chi-square or Fisher's exact tests were used to evaluate the association of methylation status and clinic-pathological factors. The Kaplan–Meier method and Cox proportional hazards models were employed to analyze the association of methylation status and chemo-sensitivity.

Results

The results indicate that CHFR, MLH1, RASSF1A, MGMT, and FANCF were methylated in 34.3 % (35/102), 21.6 % (22/102), 12.7 % (13/102), 9.8 % (10/102), and 0 % (0/102) of samples, respectively. No association was found between methylation of CHFR, MLH1, RASSF1A, MGMT, or FANCF with gender, age, tumor size, tumor differentiation, lymph node metastasis, and TNM stage. In docetaxel-treated gastric cancer patients, resistance to docetaxel was found in CHFR unmethylated patients by Cox proportional hazards model (HR 0.243, 95 % CI, 0.069–0.859, p = 0.028), and overall survival is longer in the CHFR methylated group compared with the CHFR unmethylated group (log-rank, p = 0.036). In oxaliplatin-treated gastric cancer patients, resistance to oxaliplatin was found in MLH1 methylated patients (HR 2.988, 95 % CI, 1.064–8.394, p = 0.038), and overall survival was longer in the MLH1 unmethylated group compared with the MLH1 methylated group (log-rank, p = 0.046).

Conclusions

CHFR is frequently methylated in human gastric cancer, and CHFR methylation may serve as a docetaxel-sensitive marker. MLH1 methylation was related to oxaliplatin resistance in gastric cancer patients.

Keywords: Gastric cancer, CHFR, MLH1, RASSF1A, MGMT, DNA methylation, DNA damage repair genes, Chemo-sensitive marker

Introduction

Gastric cancer is the fourth most commonly diagnosed cancer and the second leading cause of cancer-related death worldwide, with the highest incidence in Eastern Asian countries [1]. Most patients are diagnosed at an advanced stage, and chemotherapy becomes an important approach. However, prognosis remains unsatisfactory because of side effects and chemo-resistance. It is desirable to find a group of chemo-sensitive markers.

Methylation of the DNA damage repair gene was reported as a chemo-sensitive markers in a few cancers. To find chemo-sensitive markers in gastric cancer, we analyzed five DNA damage repair genes in this study.

Checkpoint with FHA and ring finger (CHFR) is a G2/M checkpoint inhibitor. Methylation of CHFR was reported to be sensitive to paclitaxel in endometrial and gastric cancer cell lines [2, 3]. The RAS association domain family 1A (RASSF1A) gene, a candidate tumor suppressor, may regulate microtubule and genomic stability [4]. RASSF1A hypermethylation mediated resistance to cisplatin and tamoxifen in male germ cell tumors and breast cancer [5, 6]. FANCF is a member of the Fanconi anemia gene family. Recently, it has been shown that promoter region hypermethylation disrupts the FA-BRCA pathway, resulting in cisplatin resistance in other malignant tumors [7, 8]. O6-Methylguanin DNA methyltransferase (MGMT) removes mutagenic alkyl groups from the O6 position of guanine, leading to G→A transitions after DNA damage [9]. MGMT is frequently lost because of methylation in brain tumors, and this methylation correlates with responsiveness to alkylator-based chemotherapy [1012]. Demethylation of MLH1 (mutL homologue 1), a DNA mismatch repair gene, sensitizes the A2780 cell line to platinum [13]. In this study, we mainly focused on the methylation status of these five DNA repair genes and the sensitivity of oxaliplatin and docetaxel in gastric cancer.

Methods

Gastric cancer samples

We collected 102 cases of surgically resected gastric cancer tissue specimens from Chinese PLA General Hospital from April 2006 to June 2010. The patients, 30 women (29.4 %) and 72 men (70.6 %), were 26 to 76 years of age, with a median age of 53 years. None of the patients had received radiotherapy or chemotherapy before surgical resection. After surgery, 41 patients (40.2 %) received docetaxel therapy, 53 patients (52 %) received oxaliplatin treatment, and 8 patients (7.8 %) received other chemo-therapy. Docetaxel and oxaliplatin were administered intravenously on day 1 of every 21-day cycle, and capecitabine was administrated orally on week 1 and 2 of every 21-day cycle, for six cycles. Dosages of docetaxel, oxaliplatin, and capecitabine were 160 mg/m2, 130 mg/m2, and 2,000 mg/m2, respectively. Informed consent was obtained from all patients. The research protocol was approved by the institutional review board (IRB) of PLA General Hospital.

DNA preparation

Paraffin-embedded samples were sliced to 8 lm and deparaffinized by xylene. DNA was prepared by the proteinase K method. DNA samples were stored at −20 °C in low TE buffer.

Nested methylation-specific polymerase chain reaction (PCR)

Nested PCR was performed to facilitate the examination of the methylation of CHFR, MLH1, MGMT, RASSF1A and FANCF on paraffin-embedded gastric cancer samples. The bisulfite-modified DNA was subjected to a first-stage PCR incorporating external primer sets. The PCR reaction was carried out in a total volume of 25 μl with 1 U Taq Polymerase (Invitrogen, Carlsbad, CA, USA), 25 pmol external primer, 100 pmol dNTPs, 2.5 μl 10× PCR buffer, and 2 μl bisulfite-modified DNA. External primer sequences are shown in Table 1. PCR conditions included an initial denaturation at 95 °C for 5 min, followed by 35 cycles of amplification (95 °C × 30 s, 55 °C × 30 s, 72 °C × 40 s), and a final elongation step at 72 °C for 5 min. PCR products were analyzed on a 2 % agarose gel to confirm adequate template for subsequent second-stage internal methylation-specific PCR (MSP).

Table 1.

Methylation-specific polymerase chain reaction (PCR) (MSP) primers used in the present study

Genes Primer sequence (5′–3′) Products size
CHFR Flank Up AAAAATAAGGAAAAGATGTAGAYG 167
CHFR Flank Down TAAAAATTTCCRATTAAAAAAACCC
CHFR Me-Sense AGATGTAGACGTTTTTTTTTGGAGGC 100
CHFR Me-Anti-Sense ATTTCCGATTAAAAAAACCCCTTAACG
CHFR Un-Sense AGATGTAGATGTTTTTTTTTGGAGGT 115
CHFR Un-Anti-Sense AAATTTCCAATTAAAAAAACCCCTTAACA
MGMT Flank Up GYGTTTYGGATATGTTGGGATAGTT 135
MGMT Flank Down AAACTCCRCACTCTTCCRAAAAC
MGMT Me-Sense TTTCGACGTTCGTAGGTTTTCGC 81
MGMT Me-Anti-Sense GCACTCTTCCGAAAACGAAACG
MGMT Un-Sense TTTGTGTTTTGATGTTTGTAGGTTTTTGT 93
MGMT Un-Anti-Sense AACTCCACACTCTTCCAAAAACAAAACA
FANCF Flank Up GGTTTTAAGTATTATTTAYGTTAGTATTT 165
FANCF Flank Down CCTCTTACCTCCACTAATTATACAAC
FANCF Me-Sense AGTATTTGGGATTTCGTTATCGTGC 99
FANCF Me-Anti-Sense GAATAAAACCATACCGACCAAAACG
FANCF Un-Sense TATGTTAGTATTTGGGATTTTGTTATTGTGT 106
FANCF Un-Anti-Sense ACAAATAAAACCATACCAACCAAAACA
MLH1 Flank Up GGAGTGAAGGAGGTTAYGGGTAAGT 182
MLH1 Flank Down AAAAACRATAAAACCCTATACCTAATCTATC
MLH1 Me-Sense ACGTAGACGTTTTATTAGGGTCGC 115
MLH1 Me-Anti-Sense CCTCATCGTAACTACCCGCG
MLH1 Un-Sense TTTTGATGTAGATGTTTTATTAGGGTTGT 124
MLH1 Un-Anti-Sense ACCACCTCATCATAACTACCCACA
RASSf1 Flank Up GTTTAGTTTGGATTTTGGGGGAG 144
RASSf1 Flank Down CCCRCAACTCAATAAACTCAAACTC
RASSf1 Me-Sense GGGTTCGTTTTGTGGTTTCGTTC 76
RASSf1 Me-Anti-Sense TAACCCGATTAAACCCGTACTTCG
RASSf1 Un-Sense GGGGTTTGTTTTGTGGTTTTGTTT 81
RASSf1 Un-Anti-Sense AACATAACCCAATTAAACCCATACTTCA

Methylation-specific PCR

MSP primers were designed according to genomic sequences flanking the presumed transcriptional start sites. Primer sequences were oligo-synthesized (Invitrogen) to detect bisulfite-induced changes affecting unmethylated (U) and methylated (M) alleles. The MSP of 5 genes was carried out using primers showed in Table 1. A 1:1,000 dilution of external PCR product was used as internal MSP template. For each reaction, 2 μl diluted external PCR product was added. The composition of the PCR reaction is as same as the external PCR. Cycle conditions were 95 °C × 5 min for 1 cycle; 28 cycles × (95 °C × 30 s, 60 °C × 30 s, 72 °C × 30 s); and 72 °C × 5 min for 1 cycle. Each PCR assay included a positive control, using DNA treated in vitro with SssI methyltransferase (New England Biolabs, Ipswich, MA, USA). MSP products were analyzed using 2 % agarose gel electrophoresis.

Statistical analysis

Statistical analysis was performed using SPSS 16.0 software (SPSS, Chicago, IL, USA). Chi-square or Fisher's exact tests were used to evaluate the relationship between methylation status and clinicopathological characteristics. Survival rates were calculated by the Kaplan–Meier method, and differences in survival curve were evaluated using the log-rank test. Cox proportional hazards models were fit to determine independent associations of CHFR or MLH1 methylation with overall survival outcome. Two-sided tests were used to determine significance, and p < 0.05 was considered statistically significant.

Results

Methylation status of DNA repair genes and the association of methylation with clinicopathological features in gastric cancer

Methylation status of CHFR, FANCF, MGMT, MLH1, and RASSF1A was examined by MSP in 102 cases of human primary gastric cancer. No methylation was found in the FANCF gene; 35 cases (34.4 %) were methylated in the CHFR gene, 22 cases (21.6 %) were methylated in the MLH1 gene, 10 cases (9.8 %) were methylated in the MGMT gene, and 13 cases (12.7 %) were methylated in the RASSF1A gene (Fig. 1a–e). No association was found among CHFR, MLH1, MGMT, and RASSF1A methylation with gender, age, tumor size, degree of differentiation, lymph node metastasis, and TNM stage (Table 2). In 41 cases of docetaxel-treated patients, CHFR methylation was found in 17 cases (41.5 %). In 53 cases of oxaliplatin-treated patients, MLH1 methylation was found in 16 cases (30.2 %). In docetaxel-treated gastric cancer patients, overall survival was longer in the CHFR methylated group than in the CHFR unmethylated group (log-rank, p = 0.036; Fig. 2a). In oxaliplatin-treated gastric cancer patients, overall survival was longer in the MLH1 unmethylated group than in the MLH1 methylated group (log-rank, p = 0.046; Fig. 2b).

Fig. 1.

Fig. 1

Methylation of five DNA damage repair genes in gastric cancer tissues. a Methylation-specific PCR (MSP) results of CHFR. b MSP results of MLH1. c MSP results of RASSF1A. d MSP results of MGMT. e MSP results of FANCF. H2O negative control to confirm the specificity of MSP, IVD positive control to confirm the specificity of MSP, M presence of methylated alleles, U presence of unmethylated alleles, 1–7 gastric cancer samples

Table 2.

Correlation between hypermethylation in DNA repair genes and clinicopathological characteristics of 102 gastric cancer cases

Clinicopathological parameters (n) Frequency of methylation, n (%)
CHFR MLH1 MGMT RASSFA1
Gender
    Male (72) 24 (33.3) 19 (26.4) 4 (5.6) 9 (12.5)
    Female (30) 11 (36.7) 3 (10.0) 6 (20.0) 4 (13.3)
        p 0.747 0.067 0.061 1.000
Age (years)
    n < 60 (73) 26 (35.6) 14 (19.2) 9 (12.3) 9 (12.3)
    n ≥ 60 (29) 9 (31.0) 8 (27.6) 1 (3.4) 4 (13.8)
        p 0.660 0.352 0.321 1.000
Tumor histology
    Intestinal type (64) 22 (34.3) 13 (20.3) 7 (10.9) 7 (10.9)
    Diffused and mixed type (33) 13 (34.2) 9 (23.6) 3 (7.9) 6 (15.8)
        p 0.938 0.638 0.646 1.445
Differentiation
    Well and moderately differentiated (29) 9 (31.0) 3 (10.3) 3 (17.6) 1 (5.9)
    Poorly differentiated (73) 26 (35.6) 19 (26.0) 7 (8.2) 12 (14.1)
        p 0.660 0.082 0.457 0.595
Tumor size
    d < 5 (45) 13 (28.9) 12 (26.7) 5 (11.1) 4 (8.9)
    d ≥ 5 (57) 22 (38.6) 10 (17.5) 5 (8.8) 9 (15.8)
        p 0.305 0.266 0.953 0.299
Tumor invasion
    T1–T2 (13) 7 (53.8) 3 (23.1) 2 (15.4) 1 (7.7)
    T3–T4 (89) 28 (31.5) 19 (21.3) 8 (9.0) 12 (13.5)
        p 0.112 0.887 0.822 0.889
Lymph node metastasis
    N0–N1 (36) 10 (27.8) 10 (27.8) 2 (5.6) 4 (11.1)
    N1–N3 (66) 25 (37.9) 12 (18.2) 8 (12.5) 9 (14.3)
        p 0.304 0.260 0.473 0.956
Peritoneal or distant metastasis
    M0 (94) 30 (31.9) 21 (22.3) 8 (8.5) 11 (11.7)
    M1 (8) 5 (62.5) 1 (12.5) 2 (25) 2 (25)
        p 0.080 0.516 0.375 0.596
Tumor stage
    I–II (19) 6 (31.6) 6 (31.6) 2 (10.5) 3 (15.8)
    III–IV (83) 29 (34.9) 16 (19.3) 8 (9.6) 10 (12.0)
        p 0.781 0.240 0.100 0.952
Vessel invasion
    Negative (72) 25 (34.7) 15 (20.8) 9 (12.5) 9 (12.5)
    Positive (30) 10 (33.3) 7 (23.3) 1 (3.3) 4 (13.3)
        p 0.893 0.780 0.292 1.000

Pathological tumor invasion, lymph node status, distant metastasis status, and TNM stage of gastric cancer were evaluated according to American Joint Committee on Cancer (AJCC), 7th edition, 2009. Statistical analysis was performed by χ2 or Fisher exact test

p < 0.05 was considered statistically significant

Fig. 2.

Fig. 2

Association of gene methylation and overall survival in gastric cancer patients. Kaplan–Meier survival curves were constructed according to the presence of gene methylation in gastric cancer. a In the docetaxel-treated group, overall survival is longer in the CHFR methylated group than in the CHFR unmethylated group. b In the oxaliplatin-treated group, overall survival is longer in the MLH1 unmethylated group than in the MLH1 methylated group

Resistance to docetaxel treatment was found in CHFR unmethylated patients by the Cox proportional hazards model (HR 0.243, 95 % CI, 0.069–0.859, p = 0.028; Table 3), and resistance to oxaliplatin treatment was found in MLH1 methylated patients (HR 2.988, 95 % CI, 1.064–8.394, p = 0.038; Table 4).

Table 3.

Associations between clinicopathological factors and overall survival among docetaxel-treated gastric cancer patients

Clinicopathological factors Short time survival, hazard ratio 95 % confidence interval p value
CHFR
    CHFR unmethylation 1.000
    CHFR methylation 0.243 0.069–0.859 0.028*
Gender
    Male 1.000
    Female 2.115 0.555–8.062 0.272
Age (years)
    n < 60 1.000
    n ≥ 60 1.215 0.289–5.113 0.790
Tumor histology
    Intestinal type 1.000
    Diffused and mixed type 0.815 0.391–1.701 0.586
Differentiation
    Well and moderately differentiated 1.000
    Poorly differentiated 1.997 0.440–9.061 0.370
Tumor size
    d < 5 1.000
    d ≥ 5 0.351 0.107–1.149 0.084
Tumor invasion
    T1–T2 1.000
    T3–T4 2.729 0.527–14.121 0.231
Lymph node metastasis
    N0–N1 1.000
    N2–N3 1.550 0.785–3.060 0.206
Peritoneal or distant metastasis
    M0 1.000
    M1 4.048 0.256–64.064 0.321
Tumor stage
    I–II 1.000
    II–IV 0.300 0.038–2.353 0.252
Vessel invasion
    Negative 1.000
    Positive 0.837 0.200–3.508 0.808

The multivariate Cox regression model showed that CHFR methylation was associated with a decreased (75.7 %) risk of shorter overall survival compared to CHFR unmethylation (HR 0.243, 95 % CI, 0.069–0.859, p = 0.028; Table 3) in docetaxel-treated gastric cancer patients. No significant association between the other clinicopathological factors and overall survival was observed

Table 4.

Associations between clinicopathological factors and overall survival among oxaliplatin-treated gastric cancer patients

Clinicopathological factors Hazard ratio 95 % confidence interval (CI) p value
MLH1
    MLH1 unmethylation 1.000
    MLH1 methylation 2.988 1.064–8.394 0.038*
Gender
    Male 1.000
    Female 0.553 0.143–2.131 0.389
Age (years)
    n < 60 1.000
    n ≥ 60 0.398 0.142–1.116 0.080
Tumor histology
    Intestinal 1.000
    Mixed 1.173 0.704–1.955 0.539
Differentiation
    Well and moderately differentiated 1.000
    Poorly differentiated 0.653 0.184–2.319 0.510
Tumor size
    d < 5 1.000
    d ≥ 5 1.999 0.794–5.036 0.142
Tumor invasion
    T1–T2 1.000
    T3–T4 0.596 0.158–2.242 0.444
Lymph node metastasis
    N0–N1 1.000
    N2–N3 0.727 0.344–1.535 0.403
Peritoneal or distant metastasis
    M0 1.000
    M1 0.000 0.000 0.980
Tumor stage
    I–II 1.000
    III–IV 1.544 0.206–11.592 0.673
Vessel invasion
    Negative 1.000
    Positive 0.533 0.183–1.556 0.250

The multivariate Cox regression model showed that MLH1 methylation was associated with an increased (198.8 %) risk of shorter overall survival compared to MLH1 (HR 2.988, 95 % CI, 1.064–8.394, p = 0.038; Table 4) in oxaliplatin-treated gastric cancer patients. No significant association between the other clinicopathological factors and overall survival was observed. Statistical analysis was performed by the Cox proportional hazards model

p < 0.05 was considered statistically significant

*

p < 0.05

In the oxaliplatin-treated group, there was no significant difference in overall survival between the CHFR methylated group and unmethylated group (p > 0.05; Fig. 3a). In the docetaxel-treated group, there was no statistical difference in overall survival between the MLH1 methylation group and the unmethylated group (p > 0.05; Fig. 3b). These results further suggest that CHFR methylation is a docetaxel-sensitive marker, and that MLH1 methylation is a oxaliplatin-resistant marker in gastric cancer.

Fig. 3.

Fig. 3

Association of gene methylation and overall survival in gastric cancer patients. Kaplan–Meier survival curves were constructed according to the presence of gene methylation in gastric cancer. a In the oxaliplatin-treated group, there is no significant difference in overall survival between the CHFR methylated group and the unmethylated group. b In the docetaxel-treated group, there is no statistical difference in overall survival between the MLH1 methylation group and the unmethylated group

Discussion

Hypermethylation of DNA repair genes is a frequent event in the carcinogenesis of gastric cancer. It is reasonable to explore the possibility of DNA methylation serving as prognostic and chemo-sensitive markers in gastric cancer. In 102 cases of primary gastric cancer, no FANCF was methylated; 34.4 % of CHFR was methylated, 21.6 % of MLH1 was methylated, 9.8 % of MGMT was methylated, and 12.7 % of RASSFA1 was methylated. Further analysis was only focused on CHFR and MLH1 because of the limited number of methylation cases.

Cell-cycle checkpoint dysfunction is often associated with sensitivity of chemotherapeutic agents [14, 15], but mutation of mitotic checkpoint genes is rare in gastric cancer [16, 17]. Satoh et al. [3] found that CHFR is frequently methylated in gastric cancers, and other mitotic checkpoint genes (BUB1, BUB1B, BUB3, MAD2L1, MAD2L2, CENP-E, and EB1) are not inactivated. Further studies indicated that CHFR methylation is a sensitive molecular marker of microtubule inhibitors (docetaxel and paclitaxel) in gastric cancer cells. However, the relationship of CHFR methylation status and responsiveness to microtubule inhibitors in primary gastric cancer remains unclear. In our study, the methylation rate of CHFR gene was similar to previous reports in gastric cancer [1820]. Resistance to docetaxel treatment was found in CHFR unmethylated patients by the Cox proportional hazards model (HR 0.243, 95 % CI, 0.069–0.859, p = 0.028; Table 3), and the overall survival was longer in the CHFR methylated group than in the CHFR unmethylated group in docetaxel-treated gastric cancer patients (log-rank, p = 0.036; Fig. 2a). The results suggest that CHFR methylation is a sensitive marker for docetaxel in gastric cancer patients.

MLH1 is a major mismatch repair gene that has a role in maintaining the stability of the genome. Compared with colorectal cancer, mutations of DNA mismatch repair (hMLH1) are rare, despite the finding of high-frequency microsatellite instability (MSI) in gastric cancer [21, 22]. MSI is reported to be mainly caused by hypermethylation of the MLH1 promoter [2325]. Our data demonstrated that MLH1 was methylated in 21.6 % of Chinese primary gastric cancer cases. The methylation rate is similar to other reports [26, 27]. DNA mismatch repair plays a critical role in maintaining genomic integrity. Loss of DNA mismatch repair occurs in many types of tumors. The ability of mismatch repair proteins to correct DNA mismatches that occur during DNA replication, repair, and recombination was considered to be the major mechanism for maintaining genomic stability, but increasing evidence supports the suggestion that the mismatch repair system also contributes to genomic stability by stimulating DNA damage-induced apoptosis as part of the cytotoxic response to chemical agents [28]. It was reported that loss of MLH1 expression results in resistance to both cisplatin and carboplatin in a colorectal cancer cell line [29]. In an ovarian tumor cell line, development of cisplatin resistance is associated with MLH1 promoter hypermethylation [30]. Previous studies in breast and ovarian cancer have shown that MLH1 methylation significantly correlates with poor survival [31, 32]. There is no report about MLH1 methylation status and oxaliplatin sensitivity in gastric cancer. Resistance to oxaliplatin treatment was found in MLH1 methylated gastric cancer patients in our study (HR 2.988, 95 % CI, 1.064–8.394, p = 0.038; Table 4), and the overall survival was longer in the MLH1 unmethylated group compared with the MLH1 methylated group in oxaliplatin-treated gastric cancer patients (log-rank, p = 0.046; Fig. 2b). However, there is no significant difference of overall survival between the CHFR methylation group and unmethylated group in the oxaliplatin-treated group, and no statistical difference of overall survival between the MLH1 methylation group and unmethylated group in the docetaxel-treated group in gastric cancer. These results suggest that MLH1 methylation may serve as an oxaliplatin resistance marker in gastric cancer. Some have tried to find methylation changes induced by chemotherapeutic reagents, but no strong evidence was found [3335].

In conclusion, CHFR is frequently methylated in human gastric cancer, and CHFR methylation may serve as a marker of docetaxel sensitivity. MLH1 methylation was related to oxaliplatin-resistant gastric cancer patients.

Supplementary Material

Suppl Info

Acknowledgments

This work was supported by grants from the National Basic Research Program of China (973 Program No. 2012CB934002, 2010CB912802); National High-tech R&D Program of China (863 Program No. SS2012AA020314, SS2012AA020821, SS2012AA020303); National Key Scientific instrument Special Programme of China (Grant No. 2011YQ03013405); and National Science Foundation of China (Grant No. 81121004, 81071953, 81161120432).

Footnotes

Electronic supplementary material The online version of this article (doi:10.1007/s10120-014-0370-2) contains supplementary material, which is available to authorized users.

Conflict of interest J.G.H. is a consultant to MDxHealth. The other authors declare no conflict of interest.

Contributor Information

Yazhuo Li, Department of Pathology, Chinese PLA General Hospital, Haitangwan Town, Sanya 572000, Hainan, China; Department of Gastroenterology and Hepatology, Chinese PLA General Hospital, #28 Fuxing Road, Beijing 100853, China.

Yunsheng Yang, Department of Gastroenterology and Hepatology, Chinese PLA General Hospital, #28 Fuxing Road, Beijing 100853, China.

Youyong Lu, Key Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Laboratory of Molecular Oncology, Peking University Cancer Hospital and Institute, Beijing 10000, China.

James G. Herman, Oncology Center, Johns Hopkins University, 1650 Orleans Street, Baltimore, MD 21231, USA

Malcolm V. Brock, Oncology Center, Johns Hopkins University, 1650 Orleans Street, Baltimore, MD 21231, USA

Po Zhao, Department of Pathology, Chinese PLA General Hospital, #28 Fuxing Road, Beijing 100853, China.

Mingzhou Guo, Department of Gastroenterology and Hepatology, Chinese PLA General Hospital, #28 Fuxing Road, Beijing 100853, China.

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