Reason for Erratum:
Due to a typesetting error, the article was published with incorrect values in Table 4. The publisher apologizes for this error and the correct version of Table 4 appears below. This error does not change the scientific conclusions of the article in any way.
Table 4.
MM-PBSA results compared to experimental binding parameters.
| Complex | Binding parameters | MM-PBSA energy terms (KJ/mol) | ||||||
|---|---|---|---|---|---|---|---|---|
| Kon/105 (M−1 s−1) | Koff/10−5 (s−1) | KD (pM) | ΔEbinding | ΔEVdW | ΔEelectrostatic | ΔGPolar | ΔGApolar | |
| Ranibizumab/VEGFA | 1.60 | 0.73 | 46 | −760 ± 40 | −418 ± 5 | −160 ± 20 | 410 ± 30 | −592 ± 7 |
| Fab-bevacizumab/VEGFA | 5.30 | 3.10 | 58 | −807 ± 30 | −362 ± 10 | −252 ± 20 | 343 ± 30 | −536 ± 7 |
| VEGFR1d2_R2d3/VEGFA | 410 | 2.01 | 0.49 | −1440 ± 90 | −307 ± 50 | −1433 ± 100 | 1050 ± 100 | −750 ± 40 |
Kinetic and binding parameters are from Papadopoulos et al. (2012).
References
- Papadopoulos N., Martin J., Ruan Q., Rafique A., Rosconi M. P., Shi E., et al. (2012). Binding and neutralization of vascular endothelial growth factor (VEGF) and related ligands by VEGF Trap, ranibizumab and bevacizumab. Angiogenesis 15, 171–185. 10.1007/s10456-011-9249-6 [DOI] [PMC free article] [PubMed] [Google Scholar]
