BACKGROUND: Alterations of the RAS/MAPK pathway have been identified as the major driver of pediatric low-grade gliomas (PLGG) however the prevalence of specific lesions and prognostic implications are unknown. METHODS: We undertook a population based study of all PLGG diagnosed from 2000-2015. Analysis included QX200™Droplet Digital™PCR, NanoString and copy number profiling. Findings were correlated with pathology, demographics and outcome. RESULTS: Sufficient tissue for BRAF-V600E, BRAF-fusions, FGFR1-TACC1 and MYBL1 was available on 310 out of 450 biopsied patients. In decreasing frequency were BRAF-KIAA1549 fusion (38%), BRAF-V600E (14%), FGFR1-TACC1 (3%) and MYB1 alteration (1%). 44% PLGG had none of these alterations. The percent represented by each alteration varied depending on pathology and tumor location. In addition to the high prevalence of BRAF-KIAA1549 in pilocytic astrocytoma, it was found also in ganglioglioma (13%) and diffuse astrocytoma (10%). In low-grade astrocytoma, NOS BRAF-V600E and BRAF-KIAA1549 were evenly distributed, each found in 20% of cases, while in pleomorphic xanthoastrocytoma and ganglioglioma BRAF-V600E was most frequent. BRAF-KIAA1549 was found in only 10% of non-midline gliomas, MYBL1 is most prevalent in diffuse astrocytomas and exclusive to the hemispheres, while BRAF-V600E prevalence was similar in hemispheres, diencephalon and brainstem (20-30%). BRAF-V600E PLGG has significantly worse PFS when compared to NF-1 or BRAF-fused. All patients with FGFR1-TACC1 and MYBL1 are still alive. CONCLUSIONS: Our study constitutes the largest PLGG cohort assembled to our knowledge and provides a robust characterization of the clinical and genomic landscape of PLGG. This has tremendous implications in the planning and accessibility of targeted therapies.
. 2016 May 30;18(Suppl 3):iii94. doi: 10.1093/neuonc/now075.68
LG-68: THE GENETIC AND CLINICAL LANDSCAPE IN PEDIATRIC LOW GRADE GLIOMA; PRELIMINARY RESULTS FROM PLGG TASKFORCE
Michal Zapotocky
1, Alvaro Lassaletta
1, Scott Ryall
1, Anthony Arnoldo
1, Matthiew Mistry
1, Ana Guerreiro-Stucklin
1, Nataliya Zhukova
1, Vijay Ramaswamy
1, Ute Bartels
1, Annie Huang
1, Suzanne Laughlin
1, Peter Dirks
1, Eric Bouffet
1, Uri Tabori
1, Cynthia Hawkins
1
Michal Zapotocky
1The Hospital for Sick Children, Toronto, ON, Canada
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Alvaro Lassaletta
1The Hospital for Sick Children, Toronto, ON, Canada
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Anthony Arnoldo
1The Hospital for Sick Children, Toronto, ON, Canada
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Matthiew Mistry
1The Hospital for Sick Children, Toronto, ON, Canada
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Ana Guerreiro-Stucklin
1The Hospital for Sick Children, Toronto, ON, Canada
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Nataliya Zhukova
1The Hospital for Sick Children, Toronto, ON, Canada
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Vijay Ramaswamy
1The Hospital for Sick Children, Toronto, ON, Canada
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Suzanne Laughlin
1The Hospital for Sick Children, Toronto, ON, Canada
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Cynthia Hawkins
1The Hospital for Sick Children, Toronto, ON, Canada
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1The Hospital for Sick Children, Toronto, ON, Canada
Issue date 2016 Jun.
© the author(s) 2016. published by oxford university press on behalf of the society for neuro-oncology. all rights reserved. for permissions, please e-mail: journals.permissions@oup.com
PMCID: PMC4903545
