Crystal structure of the co-crystal of 5-amino­isophthalic acid and 1,2-bis(pyridin-4-yl)ethene

Scott C McGuire; Steven C Travis; Daniel W Tuohey; Thomas J Deering; Bob Martin; Jordan M Cox; Jason B Benedict

doi:10.1107/S2056989016005259

. 2016 Apr 8;72(Pt 5):639–642. doi: 10.1107/S2056989016005259

Crystal structure of the co-crystal of 5-aminoisophthalic acid and 1,2-bis(pyridin-4-yl)ethene

Scott C McGuire ^a, Steven C Travis ^a, Daniel W Tuohey ^a, Thomas J Deering ^a, Bob Martin ^b, Jordan M Cox ^a, Jason B Benedict ^c,^*

PMCID: PMC4908539 PMID: 27308008

The supramolecular structure of the title 1:1 co-crystal consists of (100) sheets linked by O—H⋯N and N—H⋯O hydrogen bonds.

Keywords: crystal structure; 5-aminoisophthalic acid; 5AIA; 1,2-bis(pyridin-4-yl)ethene (BE); co-crystal; hydrogen bonding

Abstract

In the title 1:1 co-crystal, C₁₂H₁₀N₂·C₈H₇NO₄, the bipyridine moiety shows whole-molecule disorder over two sets of sites in a 0.588 (3): 0.412 (3) ratio. In the crystal, the components form hydrogen-bonded sheets linked by N—H⋯O and O—H⋯N interactions, which stack along the a axis. A comparison to a related and previously published co-crystal of 5-amino-isophthalic acid and the shorter 4,4′-bipryidine is presented.

Chemical context

5-Amino-isophthalic acid (5AIA) is an emerging secondary building unit for a wide variety of metal–organic frameworks (MOFs). (Zeng et al., 2009 ▸; Wang et al., 2011 ▸; Cox et al., 2015 ▸) This compound is also a convenient precursor for the synthesis of azo-derivatized framework ligands, a key component in the rapidly evolving field of photochromic MOFs. (Brown et al., 2013 ▸; Castellanos et al., 2016 ▸; Walton et al., 2013 ▸; Patel et al., 2014 ▸). Similarly, 1,2-bis(pyridin-4-yl)ethene (BE) is also commonly used in MOF synthesis; however, it is routinely used in co-crystal engineering as well (Kongshaug & Fjellvag, 2003 ▸; MacGillivray et al., 2008 ▸; Desiraju, 1995 ▸) The 5AIA–BE co-crystal presented herein was produced as part of an undergraduate physical chemistry laboratory experiment developed by Jason Benedict.

Recently, the co-crystal structure of 5AIA and 4,4′-bipyridine (BP), a shorter analogue of BE, was reported (Zhang et al., 2009 ▸). Unlike many MOFs in which different length linkers lead to isorecticular structures (Eddaoudi et al., 2002 ▸), the 5AIA–BP co-crystal exhibits several notable similarities and differences when compared to 5AIA–BE. As shown in Figs. 4, 5AIA forms hydrogen bonds with two 5AIA molecules and two BP molecules. The 5AIA–BP interactions and one of the 5AIA–5AIA interactions are similar to those found in 5AIA–BE. The remaining 5AIA–5AIA interaction in 5AIA–BP consists solely of an N(amine)–H⋯OH hydrogen bond, as opposed to the N(amine)—H⋯O=C interaction found in 5AIA–BP. Interestingly, this results in a total of five hydrogen bonds in the 5AIA–BP structure compared to the six hydrogen bonds observed in 5AIA–BE.

Structural commentary

The 5AIA–BE co-crystal crystallizes with one molecule of 5AIA and one molecule of BE in the asymmetric unit (Fig. 1 ▸). Both molecules are effectively planar in the solid state (r.m.s. deviation for 5AIA = 0.155 Å). The BE moiety shows whole molecule disorder over two sets of sites, consistent with a local C2 rotation about the long axis of the molecule. The occupancy of the major and minor components was refined to be 0.588 (3) and 0.412 (3), respectively.

The asymmetric unit of the title compound, showing the numbering scheme. Displacement ellipsoids are shown at the 50% probability level.

Supramolecular features

In this structure, the 5AIA molecule forms hydrogen bonds to both itself and the BE moiety, forming extended sheets (Table 1 ▸ and Fig. 2 ▸). The 5AIA–5AIA interactions consist of N(amine)—H⋯O=C hydrogen bonds where each 5AIA makes two hydrogen bonds with two neighboring 5AIA molecules. The 5AIA–BE interaction consists of an O—H⋯N(pyridyl) hydrogen bond such that each 5AIA makes one hydrogen bond with two neighboring BE molecules. The sheets formed by these interactions stack along the the a axis to produce a layered structure (Fig. 3 ▸).

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A	D—H	H⋯A	D⋯A	D—H⋯A
N1—H1A⋯O1ⁱ	0.899 (17)	2.062 (17)	2.9540 (13)	171.0 (15)
N1—H1B⋯O3ⁱⁱ	0.894 (17)	2.157 (17)	3.0500 (13)	178.6 (13)
O2—H2⋯N3ⁱⁱⁱ	0.989 (19)	1.70 (2)	2.688 (8)	173.4 (18)
O2—H2⋯N3A ⁱⁱⁱ	0.989 (19)	1.63 (2)	2.619 (12)	177 (2)
O4—H4⋯N2^iv	0.98 (2)	1.72 (2)	2.702 (7)	173.2 (19)
O4—H4⋯N2A ^iv	0.98 (2)	1.59 (2)	2.566 (11)	175 (2)

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Symmetry codes: (i) Inline graphic ; (ii) ; (iii) ; (iv) .

Diagram illustrating the hydrogen-bonding interactions present in the two-dimensional sheets found in the 5AIA–BE co-crystal.

View down [001] showing the (100) sheets in the extended structure of the title compound.

Database survey

Recently, the co-crystal structure of 5AIA and 4,4′-bipyridine (BP), a shorter analogue of BE, was reported (Zhang et al., 2009 ▸). Unlike many MOFs in which different length linkers lead to isorecticular structures (Eddaoudi et al., 2002 ▸), the 5AIA–BP co-crystal exhibits several notable similarites and differences when compared to 5AIA–BE. As shown in Figs. 4 ▸, 5AIA forms hydrogen bonds with two 5AIA molecules and two BP molecules. The 5AIA–BP interactions and one of the 5AIA–5AIA interactions are similar to those found in 5AIA–BE. The remaining 5AIA–5AIA interaction in 5AIA–BP consists solely of an N(amine)—H⋯OH hydrogen bond, as opposed to the N(amine)—H⋯O=C interaction found in 5AIA–BP. Interestingly, this results in a total of five hydrogen bonds in the 5AIA–BP structure compared to the six hydrogen bonds observed in 5AIA–BE.

Diagram illustrating the hydrogen bonding interactions present in the previously reported 5AIA–BP co-crystal.

Synthesis and crystallization

Solid BE (0.0119 g, 6.53 × 10⁻⁵ mol) and 5AIA (0.0109 g, 6.02 × 10⁻⁵ mol) were added to a 25 ml scintillation vial. To this was added approximately 15 ml of ethyl acetate followed by gentle heating. An additional 2 ml of methanol was added and all remaining solids dissolved. The loosely capped vial was then placed into a dark cabinet. After two weeks, yellow block-shaped crystals of the title compound suitable for single-crystal X-ray diffraction measurements were obtained.

Refinement

Crystal data, data collection and structure refinement details are summarized in Table 2 ▸. Heteroatom hydrogen atoms were located in difference electron-density maps and freely refined. Hydrogen atoms attached to carbon atoms were refined using riding models with C—H = 0.95 Å and U _iso(H) = 1.2U _eq(C). The BE was found to be disordered over two sets of sites in a 0.588 (3): 0.412 (3) ratio.

Table 2. Experimental details.

Crystal data
Chemical formula	C₁₂H₁₀N₂·C₈H₇NO₄
M _r	363.36
Crystal system, space group	Monoclinic, P2₁/n
Temperature (K)	90
a, b, c (Å)	10.1614 (10), 12.0782 (12), 14.0537 (14)
β (°)	95.027 (2)
V (Å³)	1718.2 (3)
Z	4
Radiation type	Mo Kα
μ (mm⁻¹)	0.10
Crystal size (mm)	0.22 × 0.2 × 0.18

Data collection
Diffractometer	Bruker SMART APEXII CCD
Absorption correction	Multi-scan (SADABS; Bruker, 2014 ▸)
T _min, T _max	0.683, 0.747
No. of measured, independent and observed [I > 2σ(I)] reflections	24372, 6546, 4519
R _int	0.033
(sin θ/λ)_max (Å⁻¹)	0.771

Refinement
R[F ² > 2σ(F ²)], wR(F ²), S	0.047, 0.143, 1.02
No. of reflections	6546
No. of parameters	378
H-atom treatment	H atoms treated by a mixture of independent and constrained refinement
Δρ_max, Δρ_min (e Å⁻³)	0.40, −0.24

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Computer programs: APEX2 and SAINT (Bruker, 2014 ▸), SHELXT (Sheldrick, 2015 ▸), SHELXL2014 (Sheldrick, 2015 ▸b) and OLEX2 (Dolomanov et al., 2009 ▸).

Supplementary Material

Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989016005259/hb7561sup1.cif

e-72-00639-sup1.cif^{(445.1KB, cif)}

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989016005259/hb7561Isup2.hkl

e-72-00639-Isup2.hkl^{(358.7KB, hkl)}

CCDC reference: 1471029

Additional supporting information: crystallographic information; 3D view; checkCIF report

Acknowledgments

This material is based upon work supported by the National Science Foundation under grant No. DMR-1455039.

supplementary crystallographic information

Crystal data

C₁₂H₁₀N₂·C₈H₇NO₄	F(000) = 760
M_r = 363.36	D_x = 1.405 Mg m⁻³
Monoclinic, P2₁/n	Mo Kα radiation, λ = 0.71073 Å
a = 10.1614 (10) Å	Cell parameters from 428 reflections
b = 12.0782 (12) Å	θ = 2.8–22.0°
c = 14.0537 (14) Å	µ = 0.10 mm⁻¹
β = 95.027 (2)°	T = 90 K
V = 1718.2 (3) Å³	Block, yellow
Z = 4	0.22 × 0.2 × 0.18 mm

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Data collection

Bruker SMART APEXII CCD diffractometer	6546 independent reflections
Radiation source: microfocus rotating anode, Incoatec Iµs	4519 reflections with I > 2σ(I)
Mirror optics monochromator	R_int = 0.033
Detector resolution: 7.9 pixels mm^-1	θ_max = 33.2°, θ_min = 2.2°
ω scans	h = −15→15
Absorption correction: multi-scan (SADABS; Bruker, 2014)	k = −16→18
T_min = 0.683, T_max = 0.747	l = −19→21
24372 measured reflections

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Refinement

Refinement on F²	0 restraints
Least-squares matrix: full	Hydrogen site location: mixed
R[F² > 2σ(F²)] = 0.047	H atoms treated by a mixture of independent and constrained refinement
wR(F²) = 0.143	w = 1/[σ²(F_o²) + (0.0727P)² + 0.2884P] where P = (F_o² + 2F_c²)/3
S = 1.02	(Δ/σ)_max < 0.001
6546 reflections	Δρ_max = 0.40 e Å⁻³
378 parameters	Δρ_min = −0.24 e Å⁻³

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Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

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Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å²)

	x	y	z	U_iso*/U_eq	Occ. (<1)
O1	0.21821 (10)	0.91797 (6)	0.42759 (6)	0.0299 (2)
O2	0.18838 (9)	0.81890 (6)	0.55840 (5)	0.02654 (18)
H2	0.1646 (19)	0.8932 (16)	0.5810 (13)	0.058 (5)*
O3	0.35542 (10)	0.33662 (6)	0.42624 (6)	0.0309 (2)
O4	0.35891 (9)	0.43117 (6)	0.56369 (5)	0.02640 (18)
H4	0.388 (2)	0.3606 (16)	0.5933 (14)	0.064 (6)*
N1	0.27113 (12)	0.63283 (8)	0.17186 (7)	0.0291 (2)
H1A	0.2656 (17)	0.5692 (14)	0.1385 (12)	0.043 (4)*
H1B	0.2351 (16)	0.6925 (14)	0.1424 (11)	0.040 (4)*
C1	0.27076 (11)	0.62966 (8)	0.26981 (7)	0.02010 (19)
C2	0.29909 (11)	0.53166 (8)	0.32097 (7)	0.02032 (19)
H2A	0.3164	0.4657	0.2874	0.024*
C3	0.30223 (10)	0.52951 (8)	0.42012 (7)	0.01921 (19)
C4	0.27368 (11)	0.62462 (8)	0.47130 (7)	0.01990 (19)
H4A	0.2728	0.6226	0.5388	0.024*
C5	0.24644 (10)	0.72289 (8)	0.42033 (7)	0.01881 (19)
C6	0.24657 (10)	0.72561 (8)	0.32144 (7)	0.01947 (19)
H6	0.2300	0.7935	0.2884	0.023*
C7	0.21669 (11)	0.82903 (8)	0.46877 (7)	0.0211 (2)
C8	0.34070 (11)	0.42315 (8)	0.46985 (7)	0.0215 (2)
C18	0.89056 (13)	0.89912 (9)	0.43551 (9)	0.0306 (3)
H18	0.8831	0.9091	0.5019	0.037*	0.588 (3)
H18A	0.8865	0.9167	0.5011	0.037*	0.412 (3)
N2	0.9309 (8)	0.2578 (6)	0.1571 (3)	0.0206 (8)	0.588 (3)
N3	0.8888 (10)	0.9864 (5)	0.3724 (9)	0.0203 (11)	0.588 (3)
C9	0.9283 (3)	0.3491 (2)	0.1046 (2)	0.0259 (5)	0.588 (3)
H9	0.9195	0.3426	0.0370	0.031*	0.588 (3)
C10	0.9382 (2)	0.45426 (16)	0.1453 (2)	0.0246 (4)	0.588 (3)
H10	0.9393	0.5181	0.1058	0.029*	0.588 (3)
C11	0.94634 (18)	0.46501 (16)	0.24375 (18)	0.0202 (4)	0.588 (3)
C12	0.9527 (2)	0.36771 (18)	0.29764 (18)	0.0260 (5)	0.588 (3)
H12	0.9624	0.3709	0.3654	0.031*	0.588 (3)
C13	0.9446 (4)	0.2666 (3)	0.2511 (2)	0.0240 (6)	0.588 (3)
H13	0.9491	0.2008	0.2883	0.029*	0.588 (3)
C14	0.9425 (2)	0.57258 (15)	0.29274 (13)	0.0245 (5)	0.588 (3)
H14	0.9538	0.5724	0.3606	0.029*	0.588 (3)
C15	0.9246 (2)	0.66976 (15)	0.24941 (15)	0.0241 (4)	0.588 (3)
H15	0.9170	0.6692	0.1816	0.029*	0.588 (3)
C16	0.9152 (3)	0.7790 (2)	0.2963 (2)	0.0182 (5)	0.588 (3)
C17	0.9045 (7)	0.7916 (5)	0.3934 (2)	0.0242 (8)	0.588 (3)
H17	0.9064	0.7278	0.4330	0.029*	0.588 (3)
C19	0.9010 (9)	0.9740 (6)	0.2814 (5)	0.0214 (8)	0.588 (3)
H19	0.8997	1.0381	0.2422	0.026*	0.588 (3)
C20	0.9153 (4)	0.8733 (3)	0.2402 (3)	0.0244 (6)	0.588 (3)
H20	0.9254	0.8678	0.1738	0.029*	0.588 (3)
C17A	0.9027 (10)	0.7907 (7)	0.4220 (4)	0.0258 (10)	0.412 (3)
H17A	0.9026	0.7388	0.4728	0.031*	0.412 (3)
C9A	0.9486 (4)	0.3433 (3)	0.0717 (3)	0.0219 (7)	0.412 (3)
H9A	0.9550	0.3259	0.0064	0.026*	0.412 (3)
C20A	0.9161 (6)	0.8429 (4)	0.2607 (4)	0.0260 (11)	0.412 (3)
H20A	0.9275	0.8265	0.1958	0.031*	0.412 (3)
N2A	0.9319 (11)	0.2579 (10)	0.1328 (4)	0.0202 (10)	0.412 (3)
N3A	0.8830 (15)	0.9861 (9)	0.3829 (13)	0.025 (2)	0.412 (3)
C19A	0.8995 (15)	0.9532 (9)	0.2902 (9)	0.034 (2)	0.412 (3)
H19A	0.8996	1.0094	0.2428	0.040*	0.412 (3)
C10A	0.9569 (3)	0.4532 (2)	0.0982 (3)	0.0243 (6)	0.412 (3)
H10A	0.9663	0.5087	0.0514	0.029*	0.412 (3)
C11A	0.9515 (3)	0.4826 (2)	0.1934 (3)	0.0195 (6)	0.412 (3)
C12A	0.9434 (3)	0.3974 (3)	0.2586 (3)	0.0250 (6)	0.412 (3)
H12A	0.9448	0.4125	0.3250	0.030*	0.412 (3)
C13A	0.9330 (6)	0.2880 (4)	0.2245 (4)	0.0293 (10)	0.412 (3)
H13A	0.9262	0.2309	0.2703	0.035*	0.412 (3)
C14A	0.9493 (3)	0.6007 (2)	0.21878 (19)	0.0235 (6)	0.412 (3)
H14A	0.9676	0.6526	0.1709	0.028*	0.412 (3)
C15A	0.9237 (3)	0.6405 (2)	0.3033 (2)	0.0226 (6)	0.412 (3)
H15A	0.9095	0.5884	0.3521	0.027*	0.412 (3)
C16A	0.9155 (4)	0.7585 (4)	0.3276 (3)	0.0186 (7)	0.412 (3)

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Atomic displacement parameters (Å²)

	U¹¹	U²²	U³³	U¹²	U¹³	U²³
O1	0.0508 (6)	0.0126 (3)	0.0286 (4)	0.0008 (3)	0.0170 (4)	−0.0002 (3)
O2	0.0459 (5)	0.0155 (3)	0.0195 (3)	0.0059 (3)	0.0096 (3)	−0.0016 (3)
O3	0.0510 (6)	0.0143 (3)	0.0270 (4)	0.0041 (3)	0.0012 (4)	−0.0046 (3)
O4	0.0438 (5)	0.0149 (3)	0.0201 (3)	0.0063 (3)	0.0006 (3)	−0.0003 (3)
N1	0.0510 (7)	0.0180 (4)	0.0186 (4)	0.0067 (4)	0.0058 (4)	−0.0018 (3)
C1	0.0246 (5)	0.0175 (4)	0.0187 (4)	0.0010 (4)	0.0046 (4)	−0.0022 (3)
C2	0.0255 (5)	0.0148 (4)	0.0210 (4)	0.0017 (4)	0.0039 (4)	−0.0038 (3)
C3	0.0242 (5)	0.0130 (4)	0.0206 (4)	0.0003 (3)	0.0030 (4)	−0.0012 (3)
C4	0.0269 (5)	0.0142 (4)	0.0191 (4)	0.0002 (4)	0.0047 (4)	−0.0016 (3)
C5	0.0235 (5)	0.0130 (4)	0.0206 (4)	−0.0001 (3)	0.0056 (4)	−0.0026 (3)
C6	0.0236 (5)	0.0140 (4)	0.0213 (4)	0.0010 (3)	0.0050 (4)	−0.0006 (3)
C7	0.0285 (5)	0.0142 (4)	0.0214 (4)	0.0004 (4)	0.0069 (4)	−0.0025 (3)
C8	0.0285 (5)	0.0145 (4)	0.0217 (5)	−0.0002 (4)	0.0025 (4)	−0.0023 (3)
C18	0.0394 (7)	0.0178 (5)	0.0360 (6)	0.0017 (4)	0.0118 (5)	−0.0001 (4)
N2	0.0261 (11)	0.0147 (9)	0.021 (2)	−0.0007 (7)	0.0014 (18)	−0.0088 (18)
N3	0.0306 (19)	0.0099 (16)	0.022 (3)	0.0050 (11)	0.0112 (14)	−0.0001 (12)
C9	0.0351 (14)	0.0194 (9)	0.0238 (13)	−0.0024 (8)	0.0066 (10)	−0.0027 (10)
C10	0.0400 (12)	0.0158 (8)	0.0182 (11)	−0.0012 (7)	0.0044 (9)	−0.0006 (8)
C11	0.0232 (9)	0.0158 (10)	0.0219 (11)	−0.0012 (6)	0.0037 (7)	−0.0024 (7)
C12	0.0388 (12)	0.0170 (9)	0.0225 (10)	0.0016 (8)	0.0038 (9)	−0.0012 (8)
C13	0.0341 (13)	0.0160 (13)	0.0225 (15)	0.0007 (10)	0.0055 (12)	−0.0034 (9)
C14	0.0348 (11)	0.0173 (9)	0.0218 (8)	0.0012 (7)	0.0053 (7)	−0.0064 (6)
C15	0.0325 (10)	0.0176 (8)	0.0223 (9)	−0.0004 (7)	0.0021 (7)	−0.0056 (7)
C16	0.0226 (9)	0.0109 (14)	0.0211 (13)	0.0001 (8)	0.0021 (10)	0.0004 (10)
C17	0.0346 (13)	0.0133 (9)	0.026 (2)	0.0011 (8)	0.0086 (18)	−0.0038 (17)
C19	0.0301 (15)	0.0192 (19)	0.0155 (15)	0.0019 (14)	0.0054 (11)	−0.0047 (15)
C20	0.0324 (12)	0.0204 (16)	0.0205 (14)	0.0012 (12)	0.0019 (10)	−0.0034 (10)
C17A	0.0330 (18)	0.0195 (15)	0.027 (3)	0.0003 (12)	0.011 (3)	−0.005 (2)
C9A	0.0281 (17)	0.0136 (11)	0.0247 (18)	−0.0015 (10)	0.0065 (14)	−0.0010 (13)
C20A	0.0378 (18)	0.019 (3)	0.021 (2)	0.0028 (19)	0.0022 (17)	−0.0085 (17)
N2A	0.0234 (15)	0.0201 (13)	0.017 (3)	0.0010 (10)	−0.001 (2)	−0.010 (2)
N3A	0.026 (3)	0.033 (4)	0.016 (3)	−0.001 (2)	0.008 (2)	−0.011 (2)
C19A	0.039 (3)	0.029 (4)	0.032 (3)	−0.002 (3)	0.0015 (19)	0.006 (2)
C10A	0.0320 (15)	0.0166 (11)	0.0243 (15)	−0.0019 (10)	0.0035 (12)	−0.0024 (10)
C11A	0.0250 (13)	0.0163 (11)	0.0170 (15)	−0.0012 (9)	0.0008 (10)	−0.0038 (11)
C12A	0.0386 (17)	0.0155 (16)	0.0209 (15)	0.0010 (11)	0.0017 (12)	−0.0020 (11)
C13A	0.041 (2)	0.019 (2)	0.027 (3)	0.0004 (15)	0.0012 (19)	0.0024 (15)
C14A	0.0299 (14)	0.0125 (10)	0.0283 (13)	−0.0003 (9)	0.0033 (10)	−0.0035 (9)
C15A	0.0308 (14)	0.0119 (12)	0.0251 (14)	0.0007 (9)	0.0020 (10)	−0.0013 (9)
C16A	0.0207 (13)	0.0107 (14)	0.024 (2)	0.0002 (10)	0.0012 (14)	0.0033 (15)

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Geometric parameters (Å, º)

O1—C7	1.2209 (12)	C12—H12	0.9500
O2—H2	0.990 (19)	C12—C13	1.385 (4)
O2—C7	1.3222 (12)	C13—H13	0.9500
O3—C8	1.2274 (12)	C14—H14	0.9500
O4—H4	0.98 (2)	C14—C15	1.327 (3)
O4—C8	1.3191 (12)	C15—H15	0.9500
N1—H1A	0.899 (17)	C15—C16	1.482 (3)
N1—H1B	0.894 (17)	C16—C17	1.387 (4)
N1—C1	1.3775 (13)	C16—C20	1.385 (3)
C1—C2	1.4017 (14)	C17—H17	0.9500
C1—C6	1.4005 (13)	C19—H19	0.9500
C2—H2A	0.9500	C19—C20	1.360 (7)
C2—C3	1.3912 (14)	C20—H20	0.9500
C3—C4	1.3991 (13)	C17A—H17A	0.9500
C3—C8	1.4979 (14)	C17A—C16A	1.399 (6)
C4—H4A	0.9500	C9A—H9A	0.9500
C4—C5	1.4014 (13)	C9A—N2A	1.361 (10)
C5—C6	1.3902 (14)	C9A—C10A	1.379 (4)
C5—C7	1.4948 (13)	C20A—H20A	0.9500
C6—H6	0.9500	C20A—C19A	1.410 (11)
C18—H18	0.9500	C20A—C16A	1.388 (5)
C18—H18A	0.9500	N2A—C13A	1.338 (7)
C18—N3	1.376 (9)	N3A—C19A	1.39 (2)
C18—C17	1.439 (5)	C19A—H19A	0.9500
C18—C17A	1.331 (9)	C10A—H10A	0.9500
C18—N3A	1.283 (13)	C10A—C11A	1.390 (5)
N2—C9	1.326 (7)	C11A—C12A	1.385 (4)
N2—C13	1.320 (5)	C11A—C14A	1.472 (4)
N3—C19	1.305 (13)	C12A—H12A	0.9500
C9—H9	0.9500	C12A—C13A	1.406 (6)
C9—C10	1.392 (3)	C13A—H13A	0.9500
C10—H10	0.9500	C14A—H14A	0.9500
C10—C11	1.386 (3)	C14A—C15A	1.329 (4)
C11—C12	1.397 (3)	C15A—H15A	0.9500
C11—C14	1.472 (2)	C15A—C16A	1.469 (5)

C7—O2—H2	107.5 (11)	C15—C14—C11	125.02 (18)
C8—O4—H4	111.7 (11)	C15—C14—H14	117.5
H1A—N1—H1B	116.4 (15)	C14—C15—H15	116.7
C1—N1—H1A	119.4 (11)	C14—C15—C16	126.5 (2)
C1—N1—H1B	116.6 (10)	C16—C15—H15	116.7
N1—C1—C2	121.17 (9)	C17—C16—C15	123.3 (3)
N1—C1—C6	120.72 (9)	C20—C16—C15	118.4 (3)
C6—C1—C2	118.07 (9)	C20—C16—C17	118.3 (4)
C1—C2—H2A	119.5	C18—C17—H17	119.2
C3—C2—C1	121.01 (9)	C16—C17—C18	121.5 (4)
C3—C2—H2A	119.5	C16—C17—H17	119.2
C2—C3—C4	120.80 (9)	N3—C19—H19	118.6
C2—C3—C8	117.74 (8)	N3—C19—C20	122.9 (6)
C4—C3—C8	121.44 (9)	C20—C19—H19	118.6
C3—C4—H4A	120.9	C16—C20—H20	120.4
C3—C4—C5	118.24 (9)	C19—C20—C16	119.2 (4)
C5—C4—H4A	120.9	C19—C20—H20	120.4
C4—C5—C7	122.17 (9)	C18—C17A—H17A	122.4
C6—C5—C4	120.90 (9)	C18—C17A—C16A	115.3 (5)
C6—C5—C7	116.93 (8)	C16A—C17A—H17A	122.4
C1—C6—H6	119.5	N2A—C9A—H9A	117.7
C5—C6—C1	120.93 (9)	N2A—C9A—C10A	124.5 (5)
C5—C6—H6	119.5	C10A—C9A—H9A	117.7
O1—C7—O2	123.09 (9)	C19A—C20A—H20A	120.4
O1—C7—C5	121.82 (9)	C16A—C20A—H20A	120.4
O2—C7—C5	115.09 (8)	C16A—C20A—C19A	119.2 (6)
O3—C8—O4	123.31 (9)	C13A—N2A—C9A	114.3 (9)
O3—C8—C3	122.38 (9)	C18—N3A—C19A	107.5 (10)
O4—C8—C3	114.30 (8)	C20A—C19A—H19A	117.5
N3—C18—H18	122.5	N3A—C19A—C20A	125.0 (9)
N3—C18—C17	115.0 (5)	N3A—C19A—H19A	117.5
C17—C18—H18	122.5	C9A—C10A—H10A	120.1
C17A—C18—H18A	111.8	C9A—C10A—C11A	119.9 (3)
N3A—C18—H18A	111.8	C11A—C10A—H10A	120.1
N3A—C18—C17A	136.5 (8)	C10A—C11A—C14A	118.9 (3)
C13—N2—C9	119.0 (5)	C12A—C11A—C10A	117.2 (2)
C19—N3—C18	123.1 (6)	C12A—C11A—C14A	123.8 (3)
N2—C9—H9	118.9	C11A—C12A—H12A	120.7
N2—C9—C10	122.3 (3)	C11A—C12A—C13A	118.6 (3)
C10—C9—H9	118.9	C13A—C12A—H12A	120.7
C9—C10—H10	120.3	N2A—C13A—C12A	125.3 (6)
C11—C10—C9	119.4 (2)	N2A—C13A—H13A	117.4
C11—C10—H10	120.3	C12A—C13A—H13A	117.4
C10—C11—C12	117.31 (16)	C11A—C14A—H14A	117.4
C10—C11—C14	123.2 (2)	C15A—C14A—C11A	125.2 (3)
C12—C11—C14	119.4 (2)	C15A—C14A—H14A	117.4
C11—C12—H12	120.4	C14A—C15A—H15A	117.3
C13—C12—C11	119.2 (2)	C14A—C15A—C16A	125.3 (3)
C13—C12—H12	120.4	C16A—C15A—H15A	117.3
N2—C13—C12	122.7 (4)	C17A—C16A—C15A	120.1 (5)
N2—C13—H13	118.6	C20A—C16A—C17A	116.4 (5)
C12—C13—H13	118.6	C20A—C16A—C15A	123.5 (4)
C11—C14—H14	117.5

N1—C1—C2—C3	178.19 (10)	C11—C14—C15—C16	177.6 (2)
N1—C1—C6—C5	−179.82 (10)	C12—C11—C14—C15	−173.6 (2)
C1—C2—C3—C4	1.71 (16)	C13—N2—C9—C10	−0.7 (9)
C1—C2—C3—C8	−176.64 (10)	C14—C11—C12—C13	174.4 (3)
C2—C1—C6—C5	−2.05 (16)	C14—C15—C16—C17	−10.0 (5)
C2—C3—C4—C5	−2.20 (16)	C14—C15—C16—C20	170.8 (3)
C2—C3—C8—O3	−7.84 (17)	C15—C16—C17—C18	−177.6 (3)
C2—C3—C8—O4	171.27 (10)	C15—C16—C20—C19	177.1 (5)
C3—C4—C5—C6	0.59 (16)	C17—C18—N3—C19	−1.1 (12)
C3—C4—C5—C7	−179.15 (10)	C17—C18—C17A—C16A	1.4 (17)
C4—C3—C8—O3	173.81 (11)	C17—C18—N3A—C19A	−3.8 (15)
C4—C3—C8—O4	−7.07 (15)	C17—C16—C20—C19	−2.0 (7)
C4—C5—C6—C1	1.56 (16)	C20—C16—C17—C18	1.5 (7)
C4—C5—C7—O1	165.59 (11)	C17A—C18—N3—C19	−0.5 (14)
C4—C5—C7—O2	−14.70 (15)	C17A—C18—C17—C16	−179 (3)
C6—C1—C2—C3	0.43 (16)	C17A—C18—N3A—C19A	−4.3 (18)
C6—C5—C7—O1	−14.15 (16)	C9A—N2A—C13A—C12A	3.1 (13)
C6—C5—C7—O2	165.55 (10)	C9A—C10A—C11A—C12A	2.7 (4)
C7—C5—C6—C1	−178.69 (10)	C9A—C10A—C11A—C14A	−174.9 (3)
C8—C3—C4—C5	176.09 (10)	N2A—C9A—C10A—C11A	1.6 (8)
C18—N3—C19—C20	0.6 (15)	N3A—C18—N3—C19	−159 (11)
C18—C17A—C16A—C20A	0.9 (9)	N3A—C18—C17—C16	2.5 (10)
C18—C17A—C16A—C15A	−177.3 (5)	N3A—C18—C17A—C16A	2.8 (15)
C18—N3A—C19A—C20A	2 (2)	C19A—C20A—C16A—C17A	−2.1 (11)
N2—C9—C10—C11	−2.3 (6)	C19A—C20A—C16A—C15A	176.0 (8)
N3—C18—C17—C16	0.0 (8)	C10A—C9A—N2A—C13A	−4.4 (12)
N3—C18—C17A—C16A	−0.3 (12)	C10A—C11A—C12A—C13A	−3.8 (5)
N3—C18—N3A—C19A	19 (9)	C10A—C11A—C14A—C15A	168.9 (3)
N3—C19—C20—C16	1.0 (12)	C11A—C12A—C13A—N2A	0.9 (9)
C9—N2—C13—C12	1.9 (9)	C11A—C14A—C15A—C16A	−177.1 (3)
C9—C10—C11—C12	4.0 (3)	C12A—C11A—C14A—C15A	−8.5 (5)
C9—C10—C11—C14	−173.2 (2)	C14A—C11A—C12A—C13A	173.6 (4)
C10—C11—C12—C13	−2.9 (3)	C14A—C15A—C16A—C17A	−172.8 (5)
C10—C11—C14—C15	3.5 (3)	C14A—C15A—C16A—C20A	9.1 (6)
C11—C12—C13—N2	−0.1 (6)	C16A—C20A—C19A—N3A	0.5 (19)

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Hydrogen-bond geometry (Å, º)

D—H···A	D—H	H···A	D···A	D—H···A
N1—H1A···O1ⁱ	0.899 (17)	2.062 (17)	2.9540 (13)	171.0 (15)
N1—H1B···O3ⁱⁱ	0.894 (17)	2.157 (17)	3.0500 (13)	178.6 (13)
O2—H2···N3ⁱⁱⁱ	0.989 (19)	1.70 (2)	2.688 (8)	173.4 (18)
O2—H2···N3Aⁱⁱⁱ	0.989 (19)	1.63 (2)	2.619 (12)	177 (2)
O4—H4···N2^iv	0.98 (2)	1.72 (2)	2.702 (7)	173.2 (19)
O4—H4···N2A^iv	0.98 (2)	1.59 (2)	2.566 (11)	175 (2)

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Symmetry codes: (i) −x+1/2, y−1/2, −z+1/2; (ii) −x+1/2, y+1/2, −z+1/2; (iii) −x+1, −y+2, −z+1; (iv) x−1/2, −y+1/2, z+1/2.

References

Brown, J. W., Henderson, B. L., Kiesz, M. D., Whalley, A. C., Morris, W., Grunder, S., Deng, H., Furukawa, H., Zink, J. I., Stoddart, J. F. & Yaghi, O. M. (2013). Chem. Sci. 4, 2858–2864.
Bruker (2014). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA.
Castellanos, S., Goulet-Hanssens, A., Zhao, F., Dikhtiarenko, A., Pustovarenko, A., Hecht, S., Gascon, J., Kapteijn, F. & Bléger, D. (2016). Chem. Eur. J. 22, 746–752. [DOI] [PubMed]
Cox, J. M., Walton, I. M., Benson, C. A., Chen, Y.-S. & Benedict, J. B. (2015). J. Appl. Cryst. 48, 578–581.
Desiraju, G. R. (1995). Angew. Chem. Int. Ed. Engl. 34, 2311–2327.
Dolomanov, O. V., Bourhis, L. J., Gildea, R. J., Howard, J. A. K. & Puschmann, H. (2009). J. Appl. Cryst. 42, 339–341.
Eddaoudi, M., Kim, J., Rosi, N., Vodak, D., Wachter, J., O’Keeffe, M. & Yaghi, O. M. (2002). Science, 295, 469–472. [DOI] [PubMed]
Kongshaug, K. O. & Fjellvåg, H. (2003). J. Solid State Chem. 175, 182–187.
MacGillivray, L. R., Papaefstathiou, G. S., Friščić, T., Hamilton, T. D., Bučar, D.-K., Chu, Q., Varshney, D. B. & Georgiev, I. G. (2008). Acc. Chem. Res. 41, 280–291. [DOI] [PubMed]
Patel, D. G. (D.), Walton, I. M., Cox, J. M., Gleason, C. J., Butzer, D. R. & Benedict, J. B. (2014). Chem. Commun. 50, 2653–2656. [DOI] [PubMed]
Sheldrick, G. M. (2015). Acta Cryst. C71, 3–8.
Walton, I. M., Cox, J. M., Coppin, J. A., Linderman, C. M., Patel, D. G. (D.) & Benedict, J. B. (2013). Chem. Commun. 49, 8012–8014. [DOI] [PubMed]
Wang, H.-N., Meng, X., Yang, G.-S., Wang, X.-L., Shao, K.-Z., Su, Z.-M. & Wang, C.-G. (2011). Chem. Commun. 47, 7128–7130. [DOI] [PubMed]
Zeng, M.-H., Hu, S., Chen, Q., Xie, G., Shuai, Q., Gao, S.-L. & Tang, L.-Y. (2009). Inorg. Chem. 48, 7070–7079. [DOI] [PubMed]
Zhang, X., Zhu, B. & Guo, F. (2009). Asian J. Chem. 21, 7072–7076.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989016005259/hb7561sup1.cif

e-72-00639-sup1.cif^{(445.1KB, cif)}

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989016005259/hb7561Isup2.hkl

e-72-00639-Isup2.hkl^{(358.7KB, hkl)}

CCDC reference: 1471029

Additional supporting information: crystallographic information; 3D view; checkCIF report

[bb1] Brown, J. W., Henderson, B. L., Kiesz, M. D., Whalley, A. C., Morris, W., Grunder, S., Deng, H., Furukawa, H., Zink, J. I., Stoddart, J. F. & Yaghi, O. M. (2013). Chem. Sci. 4, 2858–2864.

[bb2] Bruker (2014). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA.

[bb3] Castellanos, S., Goulet-Hanssens, A., Zhao, F., Dikhtiarenko, A., Pustovarenko, A., Hecht, S., Gascon, J., Kapteijn, F. & Bléger, D. (2016). Chem. Eur. J. 22, 746–752. [DOI] [PubMed]

[bb4] Cox, J. M., Walton, I. M., Benson, C. A., Chen, Y.-S. & Benedict, J. B. (2015). J. Appl. Cryst. 48, 578–581.

[bb5] Desiraju, G. R. (1995). Angew. Chem. Int. Ed. Engl. 34, 2311–2327.

[bb6] Dolomanov, O. V., Bourhis, L. J., Gildea, R. J., Howard, J. A. K. & Puschmann, H. (2009). J. Appl. Cryst. 42, 339–341.

[bb7] Eddaoudi, M., Kim, J., Rosi, N., Vodak, D., Wachter, J., O’Keeffe, M. & Yaghi, O. M. (2002). Science, 295, 469–472. [DOI] [PubMed]

[bb8] Kongshaug, K. O. & Fjellvåg, H. (2003). J. Solid State Chem. 175, 182–187.

[bb9] MacGillivray, L. R., Papaefstathiou, G. S., Friščić, T., Hamilton, T. D., Bučar, D.-K., Chu, Q., Varshney, D. B. & Georgiev, I. G. (2008). Acc. Chem. Res. 41, 280–291. [DOI] [PubMed]

[bb10] Patel, D. G. (D.), Walton, I. M., Cox, J. M., Gleason, C. J., Butzer, D. R. & Benedict, J. B. (2014). Chem. Commun. 50, 2653–2656. [DOI] [PubMed]

[bb11] Sheldrick, G. M. (2015). Acta Cryst. C71, 3–8.

[bb12] Walton, I. M., Cox, J. M., Coppin, J. A., Linderman, C. M., Patel, D. G. (D.) & Benedict, J. B. (2013). Chem. Commun. 49, 8012–8014. [DOI] [PubMed]

[bb13] Wang, H.-N., Meng, X., Yang, G.-S., Wang, X.-L., Shao, K.-Z., Su, Z.-M. & Wang, C.-G. (2011). Chem. Commun. 47, 7128–7130. [DOI] [PubMed]

[bb14] Zeng, M.-H., Hu, S., Chen, Q., Xie, G., Shuai, Q., Gao, S.-L. & Tang, L.-Y. (2009). Inorg. Chem. 48, 7070–7079. [DOI] [PubMed]

[bb15] Zhang, X., Zhu, B. & Guo, F. (2009). Asian J. Chem. 21, 7072–7076.

PERMALINK

Crystal structure of the co-crystal of 5-amino­isophthalic acid and 1,2-bis(pyridin-4-yl)ethene

Scott C McGuire

Steven C Travis

Daniel W Tuohey

Thomas J Deering

Bob Martin

Jordan M Cox

Jason B Benedict

Abstract

Chemical context

Structural commentary

Figure 1.

Supra­molecular features

Table 1. Hydrogen-bond geometry (Å, °).

Figure 2.

Figure 3.

Database survey

Figure 4.

Synthesis and crystallization

Refinement

Table 2. Experimental details.

Supplementary Material

Acknowledgments

supplementary crystallographic information

Crystal data

Data collection

Refinement

Special details

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

Atomic displacement parameters (Å2)

Geometric parameters (Å, º)

Hydrogen-bond geometry (Å, º)

References

Associated Data

Supplementary Materials

ACTIONS

PERMALINK

RESOURCES

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Links to NCBI Databases

Crystal structure of the co-crystal of 5-aminoisophthalic acid and 1,2-bis(pyridin-4-yl)ethene

Supramolecular features

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å²)

Atomic displacement parameters (Å²)