Skip to main content
Acta Crystallographica Section E: Crystallographic Communications logoLink to Acta Crystallographica Section E: Crystallographic Communications
. 2016 May 27;72(Pt 6):849–853. doi: 10.1107/S205698901600832X

(2Z)-3-Hy­droxy-1-(pyridin-2-yl)-3-(pyridin-3-yl)prop-2-en-1-one: crystal structure and Hirshfeld surface analysis

Sze-Ling Lee a, Ai Ling Tan a, David J Young b,, Mukesh M Jotani c, Edward R T Tiekink d,*
PMCID: PMC4908566  PMID: 27308057

The title mol­ecule, featuring an intra­molecular O—H⋯O hydrogen bond, is non-planar as seen in the dihedral angle between the pyridyl rings of 7.45 (7)°. In the crystal, supra­molecular chains are formed via π(pyridin-2-yl)–π(pyridin-3-yl) inter­actions.

Keywords: crystal structure; propane-1,3-dione; hydrogen bond; Hirshfeld surface

Abstract

The title compound, C13H10N2O2 [also called 1-(pyridin-2-yl)-3-(pyridin-3-yl)propane-1,3-dione], features an almost planar (r.m.s. deviation = 0.0095 Å) central C3O2 core consolidated by an intra­molecular hy­droxy-O—H⋯O(carbon­yl) hydrogen bond. Twists are evident in the mol­ecule, as seen in the dihedral angles between the central core and the 2- and pyridin-3-yl rings of 8.91 (7) and 15.88 (6)°, respectively. The conformation about the C=C bond [1.3931 (17) Å] is Z, and the N atoms lie to the same side of the mol­ecule. In the mol­ecular packing, supra­molecular chains along the a axis are mediated by π(pyridin-2-yl)–π(pyridin-3-yl) inter­actions [inter-centroid distance = 3.7662 (9) Å]. The observation that chains pack with no directional inter­actions between them is consistent with the calculated electrostatic potential, which indicates that repulsive inter­actions dominate.

Chemical context  

The β-diketonates of virtually all metals are known (Lamprey, 1960) because of the stability of the resulting six-membered metallocycle formed from bidentate coordination through the two oxygen atoms and the ability of the ligand to be accommodated within the common octa­hedral, tetra­hedral and square-pyramidal coordination geometries. There has been an inter­est over the last few years to introduce extra donor functionality such as nitrile and pyridyl to this class of ligand to generate heterometallic complexes and novel coordination networks. Dipyridyl β-diketonates, for example, have been used to synthesize mixed-metal–organic frameworks. Burrows and co-workers employed di(pyridin-4-yl)propane-1,3-dione to prepare the corresponding AlIII and GaIII octa­hedral building blocks for network structures linked by AgI ions (Burrows et al., 2010). Carlucci and co-workers used the same ligand to make FeIII metalloligands that were again joined by coordination to AgI ions. The type of the resulting two- or three-dimensional coordination polymer depended on the nature of the counter-ion to silver (Carlucci et al., 2011). By comparison, the di(pyridin-2-yl)propane-1,3-dione ligand, which also has extra donor functionality available for coord­ination, is sterically hindered to allow network formation. Tan and co-workers prepared the CdII and CuII complexes from this ligand and did indeed observe chelation through the 2,2′-nitro­gen atoms (Tan et al., 2012). However, they did not observe solid-state network formation from bridging oxygen-atom, μ2-Cl or μ3-Cl donors in the CdII complexes; the CuII complex was a tetra­nuclear oligomer linked via bridging water and acetate counter-ions (Tan et al., 2012). Less work has been performed with the unsymmetrical pyridyl β-diketonates. Zhang and co-workers have made the FeIII salt of 3-(pyridin-4-yl)-2,4-penta­nedione as well as the mixed-MOF with AgNO3 in a two-dimensional honeycomb structure while at higher AgI concentrations, a one-dimensional ladder motif was formed (Zhang et al., 2008). This ligand and the symmetrical 4,4′- and 3,3′- variants have been treated with hydrazine to give the corresponding pyrazoles that were used to prepare strongly photoluminescent CuI coordination polymers (Zhan et al., 2011).graphic file with name e-72-00849-scheme1.jpg

All of the mentioned dipyridyl ligands can be conveniently prepared by the Claisen condensation of an acetyl­pyridine with a pyridine carb­oxy­lic ester. The title compound, (I), has not previously been reported, but was prepared in this way from 2-acetyl­pyridine and ethyl nicotinate, and crystals suitable for X-ray crystallography were obtained by recrystallization from a mixture of di­chloro­methane and hexane. Herein, the crystal structure analysis of (I) is described along with a detailed investigation of the mol­ecular packing by a Hirshfeld surface analysis.

Structural commentary  

In (I), the assignment of carbonyl- versus hy­droxy-O atoms is not readily confirmed by a great disparity in the C1—O1 [1.2871 (14) Å] and C3—O2 [1.3041 (14) Å] bond lengths. The assignment was based on an unrestrained refinement of the H1O atom which resulted in a O2—H1O bond length of 1.090 (18) Å. More certainty is associated with the assignment of the nitro­gen atoms in the pyridyl rings. Thus, the short C5—N1 and C4—N1 [1.3325 (17) and 1.3484 (15) Å] and C10—N2 and C11—N2 [1.3371 (17) and 1.3397 (18) Å] bond lengths cf. the C—C bonds in the rings confirm their assignment. The central C3O2 residual in (I), Fig. 1, is essentially planar with the r.m.s. deviation of the five atoms being 0.0095 Å. The syn arrangement of the oxygen atoms enables the formation of an intra­molecular hy­droxy-O—H⋯O(carbon­yl) hydrogen bond, Table 1. The dihedral angles formed between the central plane and the N1- and N2-pyridinyl rings are 8.91 (7) and 15.88 (6)°, respectively, indicating twists in the mol­ecule. The dihedral angle between the pyridyl rings is 7.45 (7)°. The conformation about the C2=C3 [1.3931 (17) Å] is Z, and, to a first approximation, the N1 and N2 atoms lie to the same side of the mol­ecule.

Figure 1.

Figure 1

The mol­ecular structure of (I), showing the atom-labelling scheme and displacement ellipsoids at the 70% probability level.

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O2—H2O⋯O1 0.85 (2) 1.65 (1) 2.4673 (14) 160 (2)

Supra­molecular features  

The mol­ecular packing in the crystal is dominated by π–π inter­actions formed between the N1- and N2-pyridinyl rings of translationally related mol­ecules [Cg(N1-pyridin­yl)⋯Cg(N2-pyridin­yl) = 3.7662 (9) Å, angle of inclination = 7.45 (6)° for symmetry operation 1 + x, y, z]. The result is the formation of a linear supra­molecular chain, Fig. 2 a. The chains pack with no directional inter­actions between them in accord with the distance criteria in PLATON (Spek, 2009), Fig. 2 b.

Figure 2.

Figure 2

Mol­ecular packing in (I): (a) a view of the supra­molecular chain along the a axis sustained by π–π inter­actions and (b) unit-cell contents shown in projection down the a axis. The π–π inter­actions are shown as purple dashed lines.

Hirshfeld surface analysis  

The program Crystal Explorer 3.1 (Wolff et al., 2012) was used to generate Hirshfeld surfaces mapped over the electrostatic potential, d norm, shape-index and curvedness. The electrostatic potential was calculated with TONTO (Spackman et al., 2008; Jayatilaka et al., 2005), integrated in Crystal Explorer, using the experimental geometry as the input. The electrostatic potentials were mapped on the Hirshfeld surface using the STO-3G basis set at the Hartree–Fock level of theory over a range ±0.06 au. The contact distances d i and d e from the Hirshfeld surface to the nearest atom inside and outside, respectively, enables the analysis of the inter­molecular inter­actions through the mapping of d norm. The combination of d e and d i in the form of a two-dimensional fingerprint plot (McKinnon et al., 2004) provides a summary of the inter­molecular contacts in the crystal.

From the Hirshfeld surface mapped over electrostatic potential, Fig. 3, the negative potentials around the oxygen atoms of the hy­droxy and carbonyl groups as well as about the nitro­gen atoms of pyridyl rings prevent their participation in inter­molecular inter­actions in the crystal of (I) due to the electrostatic repulsion that would eventuate. The presence of a short inter­molecular C⋯C contact between the C5 and C10 atoms [C5⋯C10 = 3.313 (2) Å; symmetry code: −1 + x, y, z], which fall within the π–π contacts between pyridyl rings (Fig. 2 a), is viewed as bright-red spots near these atoms on the Hirshfeld surface mapped over d norm, Fig. 4.

Figure 3.

Figure 3

A view of the Hirshfeld surface mapped over electrostatic potential for (I). The red and blue regions represent negative and positive electrostatic potentials, respectively.

Figure 4.

Figure 4

Two views of the Hirshfeld surface mapped over d norm for (I): the bright-red spots at (a) C5 and (b) C10 indicate their involvement in short inter­molecular C⋯C contacts.

The overall 2D fingerprint plot, Fig. 5 a, and those delin­eated into H⋯H, C⋯C, O⋯H/H⋯O, C⋯H/H⋯C and N⋯H/H⋯N contacts are illustrated in Fig. 5 bf, respectively; their relative contributions to the surface are qu­anti­fied in Table 2. The inter­atomic H⋯H contacts (McKinnon et al., 2007) appear as the scattered points over the greater part of the plot shown in Fig. 5 b, with a single peak at (d e, d i) less than the van der Waals separation corresponding to a short H13⋯H13 contact of 2.33 Å (symmetry code: 1 − x, −y, −z). The short inter­atomic C5⋯C10 contact and π–π stacking inter­actions appear as an arrow-like distribution of points with the tip at d e + d i ∼ 3.3 Å (Fig. 5 c). The presence of π–π stacking inter­actions between the pyridyl rings is also apparent from the appearance of red and blue triangle pairs on the Hirshfeld surface mapped with shape-index property identified with arrows in the image of Fig. 6, and in the flat region on the Hirshfeld surface mapped over curvedness in Fig. 7.

Figure 5.

Figure 5

The two-dimensional fingerprint plots for (I): (a) all inter­actions, and delineated into (b) H⋯H, (c) C⋯C, (d) O⋯H/H⋯O, (e) C⋯H/H⋯C and (f) N⋯H/H⋯N inter­actions.

Table 2. Percentage contribution of the different inter­molecular inter­actions to the Hirshfeld surface of (I).

Contact %
H⋯H 36.2
O⋯H/H⋯O 13.2
C⋯H/H⋯C 22.9
N⋯H/H⋯N 14.6
C⋯C 6.1
C⋯O/O⋯C 2.9
C⋯N/N⋯C 2.8
O⋯O 0.9
N⋯N 0.4

Figure 6.

Figure 6

A view of the Hirshfeld surface mapped with shape-index property for (I). The red and blue triangles identified with arrows indicate π–π stacking inter­actions.

Figure 7.

Figure 7

A view of the Hirshfeld surface mapped over curvedness for (I). The flat regions highlight the involvement of rings in the π–π stacking inter­actions.

The two-dimensional fingerprint plots delineated into O⋯H/H⋯O, C⋯H/H⋯C and N⋯H/H⋯N inter­actions exhibit their usual characteristic features in their respective plots; Fig. 4 df. However, the points are distributed at (d e, d i) distances greater than their respective van der Waals separations. This is consistent with the repulsion between the atoms having electrostatic negative potential dominating the mol­ecular packing, hence the lack of specific inter­molecular inter­actions between supra­molecular chains.

Database survey  

A survey of the Cambridge Structural Database (Groom et al., 2016) revealed that there are two closely related pyridyl-substituted propane-1,3-dione structures in the crystallographic literature. These are the mono-pyridyl derivatives 3-hy­droxy-1-phenyl-3-(pyridin-3-yl)prop-2-en-1-one (II) and 3-hy­droxy-1-phenyl-3-(pyridin-4-yl)prop-2-en-1-one (III), both published by Dudek et al. (2011). Each structure features a very similar central core with the intra­molecular O—H⋯O hydrogen bond. In each of (II) and (III), the pyridyl ring is connected to the carbon atom bearing the hy­droxy group. As seen from the overlay diagram (Fig. 8) and as qu­anti­fied in Table 3, the three structures (I)–(III) have very similar conformations.

Figure 8.

Figure 8

Overlay diagram of mol­ecules of (I) (red image), (II) (green) and (III) (blue). The mol­ecules have been overlapped so that the central five-membered rings are coincident.

Table 3. Dihedral angle (°) data for (I)–(III).

Structure C3O2/n-pyrid­yl C3O2/pyridin-2-yl or phen­yl ring/ring CSD refcodea Reference
(I) n = 3; 15.88 (6) 8.91 (7) 7.45 (7) This work
(II) n = 3; 2.23 (9) 4.20 (8) 4.38 (9) XIOXID Dudek et al. (2011)
(III)b n = 4; 8.10 (5) 11.41 (5) 3.88 (5) BEDREJ Dudek et al. (2011)

Notes: (a) Groom et al. (2016); (b) isolated as a 1:1 co-crystal with benzoic acid.

Synthesis and crystallization  

2-Acetyl­pyridine (3.0562 g, 25.2 mmol) was added to a suspension of NaH (60% dispersion in mineral oil, 2.0058 g, 50.0 mmol) in anhydrous THF (10 ml) at room temperature with stirring. Ethyl nicotinate (7.5675g, 50.1 mmol) in anhydrous THF (10ml) was added dropwise to the mixture over 3 min. The yellow mixture was refluxed under a nitro­gen atmosphere for 1.3 h and then quenched with ice–water (50 ml). Glacial acetic acid was added to adjust the pH to 6–7. The resulting yellow precipitate was collected by filtration, washed with cold water and dried under vacuum. Recrystallization from di­chloro­methane–hexane (1:1 v/v) solution afforded colourless crystals. Yield: 4.03 g (70.7%). M.p: 377–378 K. IR (KBr pellet) νmax/cm−1: 3121 (m), 3053 (m), 2922 (m), 2853 (m), 1611 (s), 1595 (s), 1539 (m), 1458 (m), 1418 (m), 1221 (m), 1188 (m), 1146 (m), 1115 (m), 1067 (m), 1018 (m), 989 (m), 926 (m), 775 (s), 739 (m), 679 (s), 611 (m). Analysis calculated for C13H10N2O2: C, 69.03; H, 4.42; N, 12.19. Found: C, 68.73; H, 4.54; N, 12.16. MS: m/z 226. 1H NMR (400 MHz, d 6–DMSO) δ 9.22 (1H, s), 8.82 (2H, m), 8.44 (1H, d, J = 7.9 Hz), 8.17 (1H, d, J = 7.8 Hz), 8.09 (1H, m), 7.70 (1H, m), 7.63 (2H, m).

Refinement details  

Crystal data, data collection and structure refinement details are summarized in Table 4. Carbon-bound H atoms were placed in their calculated positions (C—H = 0.95 Å) and were included in the refinement in the riding-model approximation, with U iso(H) set to 1.2U eq(C). The hy­droxy-H atom was located in a difference map and refined with O—H = 0.82±0.01Å, and with U iso(H) set to 1.5U eq(O).

Table 4. Experimental details.

Crystal data
Chemical formula C13H10N2O2
M r 226.23
Crystal system, space group Orthorhombic, P b c a
Temperature (K) 273
a, b, c (Å) 7.2124 (9), 14.1782 (19), 20.794 (3)
V3) 2126.4 (5)
Z 8
Radiation type Mo Kα
μ (mm−1) 0.10
Crystal size (mm) 0.20 × 0.20 × 0.19
 
Data collection
Diffractometer Bruker D8-Quest CCD
Absorption correction Multi-scan (SADABS; Sheldrick, 1996)
T min, T max 0.981, 0.982
No. of measured, independent and observed [I > 2σ(I)] reflections 46632, 2647, 2227
R int 0.057
(sin θ/λ)max−1) 0.671
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.042, 0.121, 1.05
No. of reflections 2647
No. of parameters 157
No. of restraints 1
Δρmax, Δρmin (e Å−3) 0.33, −0.24

Computer programs: SMART and SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL2014 (Sheldrick, 2015), ORTEP-3 for Windows (Farrugia, 2012), QMol (Gans & Shalloway, 2001), DIAMOND (Brandenburg, 2006) and publCIF (Westrip, 2010).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S205698901600832X/hb7587sup1.cif

e-72-00849-sup1.cif (1.4MB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S205698901600832X/hb7587Isup2.hkl

e-72-00849-Isup2.hkl (212.2KB, hkl)

Supporting information file. DOI: 10.1107/S205698901600832X/hb7587Isup3.cml

CCDC reference: 1481225

Additional supporting information: crystallographic information; 3D view; checkCIF report

Acknowledgments

We acknowledge the financial support from the Brunei Research Council (BRC) Science and Technology grant (S&T17).

supplementary crystallographic information

Crystal data

C13H10N2O2 Dx = 1.413 Mg m3
Mr = 226.23 Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, Pbca Cell parameters from 9904 reflections
a = 7.2124 (9) Å θ = 3.0–28.3°
b = 14.1782 (19) Å µ = 0.10 mm1
c = 20.794 (3) Å T = 273 K
V = 2126.4 (5) Å3 Block, colourless
Z = 8 0.20 × 0.20 × 0.19 mm
F(000) = 944

Data collection

Bruker D8-Quest CCD diffractometer 2647 independent reflections
Radiation source: sealed tube 2227 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.057
Detector resolution: 8.366 pixels mm-1 θmax = 28.5°, θmin = 3.0°
φ and ω scans h = −8→9
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) k = −18→18
Tmin = 0.981, Tmax = 0.982 l = −27→27
46632 measured reflections

Refinement

Refinement on F2 1 restraint
Least-squares matrix: full Hydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.042 w = 1/[σ2(Fo2) + (0.0588P)2 + 0.9349P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.121 (Δ/σ)max < 0.001
S = 1.05 Δρmax = 0.33 e Å3
2647 reflections Δρmin = −0.24 e Å3
157 parameters

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 −0.09862 (13) 0.14710 (7) 0.02692 (4) 0.0286 (2)
O2 0.19541 (13) 0.05816 (7) 0.02776 (4) 0.0276 (2)
H2O 0.1025 (19) 0.0929 (11) 0.0188 (8) 0.041*
N1 −0.33075 (15) 0.12603 (7) 0.17723 (5) 0.0246 (2)
N2 0.43366 (17) −0.09680 (9) 0.21246 (6) 0.0335 (3)
C1 −0.13288 (17) 0.11505 (8) 0.08360 (6) 0.0217 (3)
C2 −0.01053 (16) 0.05315 (8) 0.11536 (5) 0.0214 (3)
H2 −0.0402 0.0290 0.1557 0.026*
C3 0.15550 (17) 0.02859 (8) 0.08551 (5) 0.0211 (2)
C4 −0.30743 (16) 0.14778 (8) 0.11462 (5) 0.0203 (2)
C5 −0.48525 (19) 0.15721 (9) 0.20520 (6) 0.0286 (3)
H5 −0.5044 0.1425 0.2483 0.034*
C6 −0.61954 (19) 0.21046 (9) 0.17384 (7) 0.0294 (3)
H6 −0.7244 0.2313 0.1957 0.035*
C7 −0.59415 (18) 0.23185 (9) 0.10951 (7) 0.0284 (3)
H7 −0.6819 0.2669 0.0871 0.034*
C8 −0.43511 (18) 0.19984 (8) 0.07917 (6) 0.0245 (3)
H8 −0.4141 0.2129 0.0360 0.029*
C9 0.29989 (16) −0.03006 (8) 0.11646 (5) 0.0206 (2)
C10 0.30159 (18) −0.04710 (9) 0.18265 (6) 0.0269 (3)
H10 0.2055 −0.0225 0.2073 0.032*
C11 0.57090 (19) −0.13133 (10) 0.17598 (7) 0.0315 (3)
H11 0.6644 −0.1656 0.1960 0.038*
C12 0.58095 (19) −0.11875 (9) 0.10999 (7) 0.0308 (3)
H12 0.6782 −0.1445 0.0865 0.037*
C13 0.44368 (18) −0.06720 (9) 0.07980 (6) 0.0257 (3)
H13 0.4474 −0.0575 0.0356 0.031*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0318 (5) 0.0325 (5) 0.0214 (4) 0.0031 (4) 0.0021 (3) 0.0078 (3)
O2 0.0272 (5) 0.0349 (5) 0.0208 (4) 0.0036 (4) 0.0036 (3) 0.0050 (3)
N1 0.0235 (5) 0.0280 (5) 0.0224 (5) −0.0003 (4) −0.0005 (4) 0.0020 (4)
N2 0.0316 (6) 0.0394 (6) 0.0294 (6) 0.0077 (5) −0.0005 (5) 0.0056 (5)
C1 0.0229 (6) 0.0215 (5) 0.0207 (5) −0.0035 (4) −0.0010 (4) −0.0003 (4)
C2 0.0222 (6) 0.0232 (6) 0.0188 (5) −0.0003 (4) −0.0006 (4) 0.0020 (4)
C3 0.0226 (6) 0.0211 (5) 0.0195 (5) −0.0033 (4) −0.0009 (4) −0.0010 (4)
C4 0.0225 (6) 0.0173 (5) 0.0211 (5) −0.0022 (4) −0.0023 (4) −0.0002 (4)
C5 0.0282 (6) 0.0333 (7) 0.0243 (6) 0.0001 (5) 0.0023 (5) 0.0003 (5)
C6 0.0250 (6) 0.0277 (6) 0.0355 (7) 0.0030 (5) 0.0034 (5) −0.0046 (5)
C7 0.0275 (6) 0.0220 (6) 0.0357 (7) 0.0049 (5) −0.0053 (5) 0.0007 (5)
C8 0.0286 (6) 0.0209 (5) 0.0240 (6) 0.0006 (5) −0.0034 (5) 0.0013 (4)
C9 0.0202 (5) 0.0191 (5) 0.0224 (5) −0.0030 (4) −0.0001 (4) −0.0010 (4)
C10 0.0247 (6) 0.0320 (6) 0.0239 (6) 0.0044 (5) 0.0020 (5) 0.0022 (5)
C11 0.0263 (7) 0.0309 (7) 0.0373 (7) 0.0055 (5) −0.0021 (5) 0.0043 (5)
C12 0.0276 (6) 0.0279 (6) 0.0369 (7) 0.0066 (5) 0.0059 (5) −0.0008 (5)
C13 0.0284 (6) 0.0245 (6) 0.0243 (6) 0.0005 (5) 0.0036 (5) −0.0012 (5)

Geometric parameters (Å, º)

O1—C1 1.2871 (14) C5—H5 0.9300
O2—C3 1.3041 (14) C6—C7 1.3839 (19)
O2—H2O 0.853 (9) C6—H6 0.9300
N1—C5 1.3325 (17) C7—C8 1.3855 (18)
N1—C4 1.3484 (15) C7—H7 0.9300
N2—C10 1.3371 (17) C8—H8 0.9300
N2—C11 1.3397 (18) C9—C13 1.3907 (17)
C1—C2 1.4090 (16) C9—C10 1.3975 (16)
C1—C4 1.4888 (17) C10—H10 0.9300
C2—C3 1.3931 (17) C11—C12 1.386 (2)
C2—H2 0.9300 C11—H11 0.9300
C3—C9 1.4800 (16) C12—C13 1.3815 (18)
C4—C8 1.3915 (16) C12—H12 0.9300
C5—C6 1.3905 (19) C13—H13 0.9300
C3—O2—H2O 102.4 (12) C6—C7—C8 118.55 (12)
C5—N1—C4 116.73 (11) C6—C7—H7 120.7
C10—N2—C11 117.16 (12) C8—C7—H7 120.7
O1—C1—C2 121.93 (11) C7—C8—C4 118.71 (11)
O1—C1—C4 116.69 (10) C7—C8—H8 120.6
C2—C1—C4 121.37 (10) C4—C8—H8 120.6
C3—C2—C1 119.02 (11) C13—C9—C10 117.90 (11)
C3—C2—H2 120.5 C13—C9—C3 119.94 (11)
C1—C2—H2 120.5 C10—C9—C3 122.12 (11)
O2—C3—C2 121.32 (11) N2—C10—C9 123.63 (12)
O2—C3—C9 115.20 (10) N2—C10—H10 118.2
C2—C3—C9 123.47 (10) C9—C10—H10 118.2
N1—C4—C8 123.38 (11) N2—C11—C12 123.53 (12)
N1—C4—C1 116.91 (10) N2—C11—H11 118.2
C8—C4—C1 119.69 (11) C12—C11—H11 118.2
N1—C5—C6 123.92 (12) C13—C12—C11 118.73 (12)
N1—C5—H5 118.0 C13—C12—H12 120.6
C6—C5—H5 118.0 C11—C12—H12 120.6
C7—C6—C5 118.69 (12) C12—C13—C9 119.05 (12)
C7—C6—H6 120.7 C12—C13—H13 120.5
C5—C6—H6 120.7 C9—C13—H13 120.5
O1—C1—C2—C3 2.34 (18) N1—C4—C8—C7 0.49 (18)
C4—C1—C2—C3 −176.70 (10) C1—C4—C8—C7 −178.19 (11)
C1—C2—C3—O2 −3.26 (17) O2—C3—C9—C13 −14.19 (16)
C1—C2—C3—C9 175.33 (10) C2—C3—C9—C13 167.14 (11)
C5—N1—C4—C8 −0.14 (17) O2—C3—C9—C10 163.35 (11)
C5—N1—C4—C1 178.58 (11) C2—C3—C9—C10 −15.33 (18)
O1—C1—C4—N1 −170.37 (10) C11—N2—C10—C9 0.2 (2)
C2—C1—C4—N1 8.72 (17) C13—C9—C10—N2 0.14 (19)
O1—C1—C4—C8 8.40 (16) C3—C9—C10—N2 −177.44 (12)
C2—C1—C4—C8 −172.51 (10) C10—N2—C11—C12 −0.6 (2)
C4—N1—C5—C6 −0.55 (19) N2—C11—C12—C13 0.6 (2)
N1—C5—C6—C7 0.9 (2) C11—C12—C13—C9 −0.27 (19)
C5—C6—C7—C8 −0.48 (19) C10—C9—C13—C12 −0.09 (18)
C6—C7—C8—C4 −0.16 (18) C3—C9—C13—C12 177.55 (11)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
O2—H2O···O1 0.85 (2) 1.65 (1) 2.4673 (14) 160 (2)

References

  1. Brandenburg, K. (2006). DIAMOND. Crystal Impact GbR, Bonn, Germany.
  2. Bruker (2007). SMART and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Burrows, A. D., Frost, C. G., Mahon, M. F., Raithby, P. R., Renouf, C. L., Richardson, C. & Stevenson, A. J. (2010). Chem. Commun. 46, 5067–5069. [DOI] [PubMed]
  4. Carlucci, L., Ciani, G., Proserpio, D. M. & Visconti, M. (2011). CrystEngComm, 13, 5891–5902.
  5. Dudek, M., Clegg, J. K., Glasson, C. R. K., Kelly, N., Gloe, K., Gloe, K., Kelling, A., Buschmann, H.-J., Jolliffe, K. A., Lindoy, L. F. & Meehan, G. V. (2011). Cryst. Growth Des. 11, 1697–1704.
  6. Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854.
  7. Gans, J. & Shalloway, D. (2001). J. Mol. Graphics Modell. 19, 557–559. [DOI] [PubMed]
  8. Groom, C. R., Bruno, I. J., Lightfoot, M. P. & Ward, S. C. (2016). Acta Cryst. B72, 171–179. [DOI] [PMC free article] [PubMed]
  9. Jayatilaka, D., Grimwood, D. J., Lee, A., Lemay, A., Russel, A. J., Taylo, C., Wolff, S. K., Chenai, C. & Whitton, A. (2005). TONTO – A System for Computational Chemistry. Available at: http:// hirshfeldsurface. net/
  10. Lamprey, H. (1960). Ann. NY Acad. Sci. 88, 519–525. [DOI] [PubMed]
  11. McKinnon, J. J., Jayatilaka, D. & Spackman, M. A. (2007). Chem. Commun. pp. 3814–3816. [DOI] [PubMed]
  12. McKinnon, J. J., Spackman, M. A. & Mitchell, A. S. (2004). Acta Cryst. B60, 627–668. [DOI] [PubMed]
  13. Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany.
  14. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  15. Sheldrick, G. M. (2015). Acta Cryst. C71, 3–8.
  16. Spackman, M. A., McKinnon, J. J. & Jayatilaka, D. (2008). CrystEngComm, 10, 377–388.
  17. Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]
  18. Tan, J.-T., Zhao, W.-J., Chen, S.-P., Li, X., Lu, Y.-L., Feng, X. & Yang, X.-W. (2012). Chem. Pap. 66, 47–53.
  19. Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.
  20. Wolff, S. K., Grimwood, D. J., McKinnon, J. J., Turner, M. J., Jayatilaka, D. & Spackman, M. A. (2012). Crystal Explorer. The University of Western Australia, Australia.
  21. Zhan, S.-Z., Li, M., Zhou, X.-P., Ni, J., Huang, X.-C. & Li, D. (2011). Inorg. Chem. 50, 8879–8892. [DOI] [PubMed]
  22. Zhang, Y., Chen, B., Fronczek, F. R. & Maverick, A. W. (2008). Inorg. Chem. 47, 4433–4435. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S205698901600832X/hb7587sup1.cif

e-72-00849-sup1.cif (1.4MB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S205698901600832X/hb7587Isup2.hkl

e-72-00849-Isup2.hkl (212.2KB, hkl)

Supporting information file. DOI: 10.1107/S205698901600832X/hb7587Isup3.cml

CCDC reference: 1481225

Additional supporting information: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Crystallographic Communications are provided here courtesy of International Union of Crystallography

RESOURCES