Abstract
We develop a simple three compartment model based on mass balance equations which quantitatively describes the dynamics of breath methane concentration profiles during exercise on an ergometer. With the help of this model it is possible to estimate the endogenous production rate of methane in the large intestine by measuring breath gas concentrations of methane.
Keywords: modeling, methane, volatile organic compounds (VOCs), production rates, SRI-PTR-TOF-MS, exercise
1. Introduction
Various studies demonstrated that methane in humans majorly originates from anaerobic fermentation by methanogens in the large intestine. Methane can then traverse the intestinal mucosa and be absorbed into the systemic circulation. Since methane has a low solubility in blood, it is rapidly excreted by the lungs. It is a generally accepted criterion that a subject is considered to be a methane producer if the methane concentration in exhaled breath exceeds the ambient air level by 1 ppm [3, 7]. Approximately 30–50% of adults were found to be methane producers [30]. Considering methane production, gender, age, and ethnic differences were observed [18, 23–25]. Additionally, a significant day-today variation was reported [20]. However, the factors influencing the number of methanogens and the amount of methane produced are still unexplored.
The interaction between methanogens and gut function is an extensively studied field. Breath methane tests and culture based methods have traditionally been used to characterize methanogen populations [7]. Culture based methods have high sensitivity; however they are cumbersome and time-consuming. Nevertheless the methane breath test is a convenient, quick and effective method for the assessment of methanogen populations; therefore it is increasingly used in the diagnostics of certain gastrointestinal conditions. In clinical practice, a combined hydrogen and methane breath test has been shown to be superior for the diagnosis of carbohydrate malabsorption syndromes and small intestinal bacterial overgrowth [7]. It is commonly accepted that breath methane is associated with alterations in intestinal motility, and it is strictly related to constipation [10, 11, 27]. Additionally, numerous studies have found correlations between breath methane levels and diseases including colon-rectal cancer, irritable bowel syndrome and inflammatory bowel disease [10, 17, 27, 28]. However, the results are controversial and the impact of endogenous bacterial methane generation on health is still not known with certainty.
Although numerous studies have conducted methane breath tests, there are only relatively few studies that investigated the routes of methane excretion, i.e. the correlation between methane concentration in breath and in the gut [3]. It is generally assumed that methane is not utilized by humans, and approximately 20% of the methane produced by anaerobic fermentation is excreted by breath. The remaining 80% is lost by flatus [3].
It is worthwhile to note that a recent paper by Boros et al reviewed the possible role of methane as a gasotransmitter [4]. It provides some evidence with respect to non-bacterial generation of methane in target cells which is possibly linked to mitochondrial dysfunction. Furthermore, methane-rich saline is hypothesized of having an anti-oxidative effect [5].
Breath tests can be performed even in real time allowing to monitor biological processes in the body. In our recent study the dynamics of endogenous methane release through the respiratory system have been investigated by measuring breath methane concentration profiles during exercise on an ergometer [29]. The qualitative behavior of such profiles was in good agreement with Farhi equation [9] but the quantitative behavior deviated. The aim of this article is to develop a simple three compartment model to describe and explain quantitatively the observed breath methane concentration profiles. The present model can serve as a tool to estimate the endogenous production rate of methane in the large intestine from exhaled methane concentrations.
A list of symbols used is provided in appendix A.
2. Measurements
2.1. Setup
End-tidal methane concentration profiles were obtained by means of a real-time setup designed for synchronized measurements of exhaled breath VOCs as well as a number of respiratory and hemodynamic parameters. Our instrumentation has successfully been applied for gathering continuous data streams of these quantities during ergometer challenges [14] as well as during sleep studies [13]. These investigations aimed at evaluating the impact of breathing patterns, cardiac output or blood pressure on the observed breath concentration and permit a thorough study of characteristic changes in VOC output following variations in ventilation or perfusion. An extensive description of the technical details is given in a previous work [14].
In brief, the core of the mentioned setup consists of a head mask spirometer system allowing for the standardized extraction of arbitrary exhalation segments, which subsequently are directed into a Selective Reagent Ionization Proton Transfer Reaction Time of Flight Mass Spectrometer (SRI-PTR-TOF-MS, Ionicon Analytik GmbH, Innsbruck, Austria) for online analysis. This analytical technique has proven to be a sensitive method for the quantification of volatile molecular species M down to the ppb (parts per billion) range. To measure methane we took advantage of the reaction of the primary precursor with methane [1, 8, 33]
Count rates of the resulting product ion appear at the specified mass-to-charge ratio m/z = 47.0128 (see figure 1 and figure 6 in [15]) and can subsequently be converted to absolute concentrations by means of calibrations factors obtained from analyzing calibrations mixtures containing a known amount of methane and humidity.
Figure 1.
Spectrum of methane as measured by SRI-PTR-TOF-MS using primary ions.
So far, only some preliminary measurements were carried out by means of the setup described above. Two healthy methane producing adult volunteers (one male, one female) were asked to perform several ergometer challenges of approximately 6 min rest, 17 min with 75 W, and then approximately 6 min rest again. The exact protocol was:
seconds 0–380: the volunteer rests on the ergometer
seconds 380–1400: the volunteer pedals at a constant workload of 75 W
seconds 1400–1800: the volunteer rests on the ergometer
Figure 2 shows a tyical result of such an ergometer session for one volunteer. While the number of probands is certainly very limited, the relative changes of breath methane concentrations are in good agreement with similar measurements employing a different analytical set up as described in a recent work [29] (see figure 1 therein).
Figure 2.
Typical result of an ergometer session for one single volunteer. Average values: cardiac output (green), rest: = 5.41 [ℓ min−1];75 W: = 11.07 [ℓ min−1]; alveolar ventilation (red), rest: = 10.69 [ℓ min−1];75 W: = 33.12 [ℓ min−1]; and exhaled end-tidal (nose sampling) methane levels (blue), rest: CA = 31.08 [ppm]; 75 W: CA = 11.92 [ppm], room air concentration of methane: 3.37 [ppm].
3. Modeling methane distribution in the body
3.1. Methane exchange in the lungs
In humans, methane is mainly produced by enteric bacteria in the large intestine and distributed within the body by the venous blood leaving the intestine. When reaching the lungs, it is partially released into breath. The amount of methane transported at time t to and from the lungs via blood flow is given by
where denotes the cardiac output, the averaged mixed venous concentration, and Ca is the arterial concentration.
On the other hand one in- and exhales the amount
where denotes the alveolar ventilation, CI denotes the concentration in inhaled air, and CA the alveolar concentration. While CI is assumed to be zero for many endogenous VOCs, the current average atmospheric methane concentration level is about 1.8 [ppm] [21] and can hence not be neglected8.
Combining these two terms leads to the following mass balance equation for the lungs9
| (1) |
where ṼA denotes the volume of the lung. Both sides of equation (1) have units μmol min−1(compare appendix).
If the system is in an equilibrium state (e.g. stationary at rest) equation (1) reads and using Henry’s law
| (2) |
we obtain
| (3) |
where is the ventilation-perfusion ratio and λb:air denotes the blood:air partition coefficient.
Remark. The modeling approach followed above is only valid for VOCs with blood:air partition coefficient less than 10, i.e. compounds for which the upper airways have no influence on the observable breath concentrations [2]. Methane with a blood:air partition coefficient λb:air = 0.066 [26] fulfills this requirement.
Since λb:air for methane is so small we get , and λb:air + r ≈ r. From this follows that for methane it suffices to subtract the inhaled methane concentration to correct for room air levels (see a previous work for more details [31]).
Thus equation (3) can be simplified to
| (4) |
When a subject is under constant conditions at rest, is approximately constant. From equation (4) it may then be concluded that variations in the alveolar concentration CA(0) = (CA(CI) − CI) directly reflect changes in ventilation (e.g. due to altered breathing frequency) and perfusion (e.g. due to altered heart rate). This can be tested by forced hypo- and hyperventilation at rest as shown in figure 5 in a previous work [29].
The ventilation-perfusion ratio r is approximately one at rest but substantially increases for a moderate exercise regime at 75 Watts, since the cardiac output increases approximately two-fold while the ventilation increases three- to four-fold [14]. Consequently, one would expect from equation (4) that the alveolar methane concentration should decrease by a factor of approximately 1.5–2 when exercising at that workload.
Contrary to this prediction, measurements of breath methane concentrations show a drop by a factor of 3 to 4 when exercising at 75 W [15, 29], see also figure 2.
3.2. A three compartment model
The intuitive rationale for this phenomenon is as follows. The intestinal bacteria are the main source of methane. At rest, the intestine receives about 15% of the total blood flow of approximately 5 ℓ min−1, leading to an absolute perfusion of approximately 0.75 ℓ min−1, which is matched to the metabolic needs of gut tissue. When exercising moderately, this absolute blood flow to the intestine may be assumed constant, since its metabolic needs remain largely unchanged. However, the relative (fractional) blood flow to the intestine decreases, as a major part of total cardiac output is now directed to the working muscles. As a result, the relative contribution of intestinal venous blood (characterized by high methane concentrations) to mixed venous blood will be reduced, causing the mixed venous methane concentration to drop. The decrease in breath methane concentrations during exercise may hence be interpreted as a combination of two separate effects: an increased dilution within the lungs due to an increased ventilation-perfusion-ratio (see equation (4)) and an additional reduction of the mixed venous concentration levels due to a reduced fractional perfusion of the intestine.
In order to mathematically capture the mechanism illustrated above, we developed a three compartment model based on mass balance equations, similar to previous modeling efforts, e.g. with respect to isoprene [12]. The model consists of a lung compartment, a gut compartment (intestine), and a richly perfused compartment which comprises the rest of the body as shown in figure 3.
Figure 3.
Three compartment model for methane: lung compartment with gas exchange, gut compartment with production of methane by enteric bacteria, and richly perfused tissue compartment containing the rest of the body including muscles (possible but small production and metabolic rate).
The mass balance equation for the lung compartment has already been derived in equation (1). Arterial blood leaving the heart with concentration Ca is divided into two blood flows and where qgut denotes the fractional blood flow to the intestine.
The molar flow to and from the gut compartment is given by and , respectively, where the proportional factor λb:gut is the corresponding blood:tissue partition coefficient. This yields the following mass balance equation for the gut compartment (intestine):
| (5) |
Here, Ṽgut denotes the effective volume10 of the gut. The factor μ ≈ 0.2 respects the fact that 80% of methane is lost by flatus and therefore does not enter the blood stream [3]. In addition we assume that within the time frame of the ergometer sessions presented, the net production rate of methane stays constant and a possible metabolization in the large intestine can be respected by a correction of Both sides of equation (5) have units μmol min−1 (compare appendix).
Analogously, for the richly perfused tissue compartment containing the rest of the body including muscles we get
| (6) |
where Ṽrpt denotes the effective volume of this compartment, respects a possible small nonbacterial production rate and represents a possible small metabolic rate11. Both sides of equation (6) have units μmol min−1 (compare appendix).
Remark. According to Bond [3] both and are very small and hence can be neglected in a first modeling approach.
The mixed venous concentration is given by the weighted sum of the two body compartment concentrations
| (7) |
The total mass balance given by the equations (1), (5) and (6) constitutes a coupled system of three first order ordinary differential equations (ODEs) of the form
| (8) |
for the three unknown concentrations
| (9) |
The matrix A(t) and the vector b(t) are given by
| (10) |
All external inputs affecting the system can be measured by means of the experimental setup and are therefore assumed to be known. The partition coefficients λb:air, λb:rpt, λb:gut may partially be derived from literature values, see section 3.4.
Model parameters that are a priori unknown and not directly measurable include the metabolic rate , the production rates and , as well as the effective volumes Ṽrpt, Ṽgut, ṼA, which influence the time constants for achieving a steady state. These will either have to be fixed at best-guess values or estimated from the measurement data by means of a suitable parameter estimation scheme, see section 3.4.
As explained in the model rationale, the absolute blood flow through the intestine is postulated to stay approximately constant during moderate exercise. We therefore use the following simple model for the fractional blood flow qgut
| (11) |
where is the average total blood flow (cardiac output) at rest.
In addition, the methane concentration in exhaled end-tidal air is measured and assumed to be equal to the alveolar concentration
| (12) |
3.3. Steady state analysis
When in a steady state the system of differential equations reduces to the following simple linear algebraic system
| (13) |
Solving with respect to Cgut, Crpt, and yields
| (14) |
If we assume the nonbacterial production and the metabolic rate in the richly perfused compartment to be negligible we set and , respectively. Then equation (14) simplifies to
| (15) |
Furthermore, we recall that
Here we explicitely indicated the dependence of the various quantities on the inhaled concentration CI. From equation (15) we conclude that for a steady state (e.g. at rest or at a moderate constant workload):
-
(i)
The methane concentration Crpt(CI) in the richly perfused tissue compartment is proportional to the alveolar concentration. However, Crpt(CI) is much smaller than CA(CI) since λb:air is very small.
-
(ii)Analogously, since λb:air is small for Cgut we getor, vice versa,
showing that the breath methane concentration is roughly proportional to the fractional intestinal blood flow qgut.(16) -
(iii)Since we expect to be constant on a ‘medium time scale’ (e.g. during an ergometer session) we obtain
Thus the product does not change when switching from one stationary regime to another, e.g. when switching from a resting steady state to an exercise steady state at 75 W, viz.,(17)
This explains the experimental findings of a recent work [29] (see figure 3 therein). The production rate of methane in the intestine can therefore be estimated by taking the product of average steady state values of and CA(0),(18) (19)
3.4. Simulation of an ergometer session and parameter estimation
In this section we calibrate the proposed model based on the physiological data presented in figure 2, corresponding to one single representative volunteer following the line of a previous work [12]. It will turn out that the model appears to be flexible enough to capture the methane profiles in exhaled breath generally observed during moderate workload ergometer challenges as conducted in a recent work [29]. In a first attempt we set the parameter describing a possible small nonbacterial production rate to zero, i.e. we fix . For Ṽrpt and ṼA we use the nominal values ṼA = 4.1 [ℓ] and Ṽrpt = 15.22 [ℓ] (compare with table C.1 1 in a previous work [12]), and Ṽgut = 1 [ℓ].
The remaining unspecified parameters may be estimated from the knowledge of measured breath methane concentrations y by means of parameter estimation. More specifically, the subject-dependent parameter vector
as well as the nominal steady state levels c0 = c(t0) can be extracted by solving the ordinary least squares problem
| (20) |
subject to the constraints
| (21) |
Here, g is the right-hand side of the ODE system (8), and yi = Cmeas,i is the measured end-tidal methane concentration at time instant ti (t0 = 0).
For this purpose the measured physiological functions and were converted to input function handles by applying a local smoothing procedure to the associated data and interpolating the resulting profiles with splines. Furthermore, while the richly perfused compartment so far has been treated as an abstract control volume without particular reference to any specific tissue group, for identifiability reasons we now set λb:rpt = 1 as well as λb:gut = l which corresponds to the in vitro blood:tissue methane partition coefficient for brain tissue in rabbits [22], as currently no further values have been published. Initial concentrations and fitted parameters are given in table 1.
Table 1.
Decisive model parameters resulting from the fit in figure 4.
| Variable | Symbol | Fitted value (units) |
|---|---|---|
| Production intestine | 51.4 [μmol min−1] | |
| Metabolic rate | 0.01 [ℓ min−1] | |
| Initial concentration alveoli (t = 0) | CA | 1.15 [μmol ℓ−1 |
| Initial concentration rpt (t = 0) | Crpt | 0.076 [μmol ℓ−1] |
| Initial concentration intestine (t = 0) | Cgut | 13.6 [μmol ℓ−1] |
All estimated quantities for the test subject under scrutiny take values in a physiologically plausible range. According to equations (2) and (7), arterial and mixed venous blood concentrations at the start of the experiment are estimated for t = 0 as Ca = 0.076 μmol ℓ−1 and , respectively. Total endogenous production is estimated to equal approximately 51.4 [μmol min−1]. The simulation indicates also a very small metabolic rate of 0.01 [ℓ min−1], which is negligible compared to the production rate.
The results of the simulation are presented in figure 4. The first panel of figure 4 shows that the methane concentration profiles obtained from the experiment and from the model are in good agreement. This suggests that the three-compartment model can describe quantitatively the methane profile changes during an ergometer challenge, while the Farhi equation provided solely qualitative agreement [29].
Figure 4.
First panel: simulation of end-tidal methane concentration behavior during exercise conditions, see figure 2. Second panel: predicted methane concentrations in mixed venous blood (). Third panel: venous blood concentration returning from the gut (Cgut) and returning from the richly perfused tissue (Crpt). Fourth panel: predicted profile of the fractional gut blood flow qgut according to equation (11).
4. Conclusion
Despite the fact that methane breath tests are now widely accepted in clinical practice, a quantitative description of the routes of methane excretion is still lacking. The present paper intends to fill this gap by introducing a model for the distribution of methane in various parts of the human body. Particularly, we aimed at capturing the exhalation kinetics of breath methane in response to exercise. Classical pulmonary inert gas elimination theory according to the Farhi equation [9] is deficient in this context, as the experimentally observed drop of breath methane concentrations during moderate exercise cannot be explained by an altered pulmonary excretion alone. Apart from an increased dilution of breath methane within the lungs (due to a rise in the ventilation-perfusion ratio r), exercise will also alter the fractional (but not the absolute) perfusion of the intestine, which represents the major production site of methane in the body. This in turn leads to an additional reduction of mixed venous methane concentrations. On the basis of this rationale, a three compartment model extending the original Farhi formalism was developed and demonstrated to be in excellent agreement with measurement data obtained from a previous study as well as from a SRI-PTR-TOF-MS setup presented in this paper.
From the model equations it can be deduced that under constant resting or workload conditions the breath methane concentration CA(0) is affected by changes of the ventilation-perfusion ratio r but also by changes of the fractional intestinal blood flow qgut, viz.,
| (22) |
This equation provides a mechanistic physiological rationale for explaining a part of the substantial intra-subject variability commonly observed in methane breath tests [19, 32]. In particular, alveolar ventilation can change considerably during breath sampling, since patients tend to hyperventilate in such a situation [6]. In this context, it has been suggested to normalize breath methane concentrations with respect to CO2 levels in order to improve the repeatability of breath measurements from the same individual [19]. Alternatively, as follows from
| (23) |
the present model points towards , i.e. the inverse of alveolar ventilation, as an appropriate normalization factor for steady-state breath methane concentrations, as this allows for a direct estimation of the underlying endogenous methane production rate in the intestine. Here, μ ≈ 0.2 is a constant factor reflecting the expected methane loss due to flatus. For perspective, taking the average resting values from figure 2, and yields an estimated (resting) production rate of 54.9 [μmol min−1]. Analogously, taking average values for a workload of 75 W, and yields an estimated (workload) production rate of 52.4 [μmol min−1]. Both estimates are in good agreement with the value obtained from fitting the model dynamics to the data, see table 1. In particular, note that the estimated endogenous methane production rate during rest and exercise is roughly constant (which is in accordance with physiological intuition), while the average breath methane concentrations during these two phases differ by a factor of roughly 2.6. This proves the efficiency of the above-mentioned normalization scheme with respect to reducing the inherent physiological variability due to equation (22).
In this sense, the model is expected to contribute towards an improved comparability between breath methane measurements as well as towards a better quantitative understanding of the correlation between exhaled methane and gut methane production in general. Measuring breath methane in combination with the present three compartment model can serve as a useful tool to assess endogenous methane production, the latter being associated with several gastrointestinal dysfunctions.
| Parameter | Symbol | Unit |
| Cardiac output | [ℓ min−1] | |
| Alveolar ventilation | [ℓ min−1] | |
| Ventilation-perfusion ratio | r | [1] |
| Averaged mixed venous concentration | [μmol ℓ−1] | |
| Arterial concentration | Ca | [μmol ℓ−1] |
| Inhaled air concentration | CI | [ppm] |
| Alveolar air concentration | CA | [ppm] |
| Richly perfused compartment concentration | Crpt | [μmol ℓ−1] |
| Gut compartment concentration | Cgut | [μmol ℓ−1] |
| Measured exhaled concentration | Cmeas | [ppm] |
| Lung volume | ṼA | [ℓ] |
| Effective volume of the richly perfused compartment | Ṽrpt | [ℓ] |
| Effective volume of the gut compartment | Ṽgut | [ℓ] |
| Metabolic rate in the richly perfused compartment | [ℓ min−1] | |
| Production rate in the richly perfused compartment | [μmol min−1] | |
| Production rate in the gut compartment | [μmol min−1] | |
| Blood:air partition coefficient | λb:air | [1] |
| Blood:richly perfused compartment partition coefficient | λb:rpt | [1] |
| Blood:gut compartment partition coefficient | λb:gut | [1] |
| Fractional blood flow to the intestine | qgut | [1] |
| Fractional loss of methane due to flatus | μ | [1] |
Appendix. List of symbols
Conversion from [ppb] to [nmol ℓ−1]:
A concentration of x [ppb] corresponds to (alternatively, x [ppm] correspond to The molar volume Vm can be derived from the ideal gas equation (which can safely be used for trace gases). For a measured pressure p of 94 600 [Pa] and a breath temperature of 34 [°C] we get
Acknowledgments
PM, MJ, and KU gratefully acknowledge support from the Austrian Science Fund (FWF) under Grant No. P24736-B23. AS was supported by a scholarship of Aktion Österreich–Ungarn. VR appreciates funding from the Austrian Agency for International Cooperation in Education and Research (OeAD-GmbH, project SPA 05/202 - FEM_BREATH). This work received funding from the European Union’s Horizon 2020 Program for research, technological development and demonstration under grant agreement No. 644031. We thank the government of Vorarlberg (Austria) for its generous support.
Footnotes
Typical room air concentrations are often even higher than 1.8 ppm.
For notational convenience we have dropped the time variable t, i.e. we write CX instead of CX(t), etc. CX denotes the instant or averaged concentration of X over a small sampling period τ, i.e.
The vascular blood compartment and the intracellular tissue compartment are assumed to be in an equilibrium and therefore can be combined into one single gut compartment with an effective volume. For more details about effective volumes compare appendix 2 in a previous paper [16].
Here we used the usual convention to multiply λb:rpt. It would be more natural to use only.
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