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The Journal of Infectious Diseases logoLink to The Journal of Infectious Diseases
. 2016 Apr 27;214(3):489–495. doi: 10.1093/infdis/jiw164

Host Polymorphisms in TLR9 and IL10 Are Associated With the Outcomes of Experimental Haemophilus ducreyi Infection in Human Volunteers

Martin Singer 1, Wei Li 3, Servaas A Morré 1,2, Sander Ouburg 1, Stanley M Spinola 3,4,5,6
PMCID: PMC4936646  PMID: 27122592

Abstract

Background. In humans inoculated with Haemophilus ducreyi, there are host effects on the possible clinical outcomes—pustule formation versus spontaneous resolution of infection. However, the immunogenetic factors that influence these outcomes are unknown. Here we examined the role of 14 single-nucleotide polymorphisms (SNPs) in 7 selected pathogen-recognition pathways and cytokine genes on the gradated outcomes of experimental infection.

Methods. DNAs from 105 volunteers infected with H. ducreyi at 3 sites were genotyped for SNPs, using real-time polymerase chain reaction. The participants were classified into 2 cohorts, by race, and into 4 groups, based on whether they formed 0, 1, 2, or 3 pustules. χ2 tests for trend and logistic regression analyses were performed on the data.

Results. In European Americans, the most significant findings were a protective association of the TLR9 +2848 GG genotype and a risk-enhancing association of the TLR9 TA haplotype with pustule formation; logistic regression showed a trend toward protection for the TLR9 +2848 GG genotype. In African Americans, logistic regression showed a protective effect for the IL10 –2849 AA genotype and a risk-enhancing effect for the IL10 AAC haplotype.

Conclusions. Variations in TLR9 and IL10 are associated with the outcome of H. ducreyi infection.

Keywords: Haemophilus ducreyi, chancroid, skin ulcers, immunogenetics, humans, innate immunity


Haemophilus ducreyi causes chancroid, a sexually transmitted disease that presents as painful genital ulcers and facilitates the transmission and acquisition of the human immunodeficiency virus (HIV) type 1 [1]. Owing to syndromic management of genital ulcers, the global prevalence of chancroid is currently undefined but has declined in many former areas of high endemicity [2, 3]. Recently, H. ducreyi was found to be the leading cause of cutaneous ulcers in children in yaws-endemic communities of the South Pacific islands and equatorial Africa [37]. Thus, H. ducreyi is an important threat to global health.

To study the biology of H. ducreyi, we developed a model in which healthy adult volunteers are inoculated at 3 sites on an upper arm with identical doses of the human-passaged (HP) genital ulcer isolate 35000HP [8, 9]. Papules develop at infected sites within 24 hours and either spontaneously resolve or progress into pustules within 2–5 days. Within a person, the outcomes (resolution vs pustule formation) of infected sites tend to be similar, suggesting a host effect on disease progression [10, 11]. When reinfected, volunteers initially classified as “resolvers” or “pustule formers” segregate toward their initial outcomes, confirming a host effect on susceptibility [10].

Experimental pustules and natural ulcers represent a failed immune response. These lesions resemble suppurative granulomas in that they consist of polymorphonuclear leukocytes (PMNs) that form an epidermal abscess, a collar of macrophages admixed with regulatory T cells below the abscess, and a deep dermal infiltrate of memory CD4+, CD8+, and natural killer (NK) cells [1215]. Unlike most bacteria that cause granulomas, H. ducreyi is surrounded by PMNs and macrophages and is extracellular [16, 17]. Thus, evasion of phagocytosis underlies disease progression [1821]. The mechanism of bacterial clearance in resolvers is unknown but likely involves enhanced phagocytic clearance, which may be shaped by the microenvironment at the infected site [10, 22]. Comparative transcriptional analysis of skin biopsy specimens obtained after a repeat infection showed that, relative to resolvers, the lesional microenvironment of pustule formers is marked by a hyperinflammatory, dysregulated state [22]. When infected with H. ducreyi, monocyte-derived myeloid dendritic cells (DCs) obtained from resolvers have a transcriptional response typical of type 1 DCs, while those derived from pustule formers have a mixed response with features of type 1 DCs and regulatory DCs, marked by upregulation of interleukin 10 (IL-10) [22]. In addition, the preinfection microbiome of resolvers shares a similar community structure that significantly differs from the preinfection microbiome of pustule formers, which is more diverse [23]. This finding may reflect biases in innate immunity between the 2 groups that drive different compositions of the microbiome [23]. These data led us to hypothesize that there may be an immunogenetic basis for differential innate immune responses to H. ducreyi that ultimately determines disease outcome.

Host immunogenetic factors are associated with the outcome of other bacterial sexually transmitted infections [2427]. For instance, single-nucleotide polymorphisms (SNPs) in the genes encoding Toll-like receptor 4 (TLR4) and TLR9 (TLR4 and TLR9, respectively) affect the susceptibility to and severity of Chlamydia trachomatis infections [24, 25]. These polymorphisms affect the ability of the TLRs to detect pathogen-associated molecular patterns, impeding the host immune response to infection.

In this study, we examined whether SNPs in genes that encode pathogen-recognition receptors (PRRs), regulators of innate immune responses, or cytokines correlated with the outcomes of experimental infection in 2 cohorts of experimentally infected European American and African American individuals in the United States. As innate immune responses appear to be important in determining outcome, we analyzed SNPs in TLRs, nucleotide oligomerization domain (NOD)–like receptors, single immunoglobulin interleukin 1 receptor (SIGIRR), and IL–10.

METHODS

Between March 2000 and June 2014, we collected blood specimens from 144 healthy adult volunteers, who had no history of previous H. ducreyi infection (Figure 1). Each volunteer was inoculated with strain 35000HP in 1 arm at 3 sites, vertically spaced 3-cm apart on the skin overlying the upper deltoid, via 1.9-mm puncture wounds made with an allergy testing device, which delivers the bacteria to the epidermis and dermis. Each site received identical doses of 35000HP, which was prepared from dedicated freezer lots according to Food and Drug Administration guidelines. Most participants were enrolled in mutant versus parent comparison trials and were also infected on the opposite arm with isogenic mutants derived from 35000HP, which can be attenuated or fully virulent for pustule formation [9]. Resolvers who formed pustules at sites inoculated with virulent mutants were considered capable of pustule formation; 3 such participants were excluded from the analysis.

Figure 1.

Figure 1.

Participant and sample selection flow chart for the European American and the African American cohorts. Data are no. of participants or samples.

In the model, we attempt to deliver a standard dose of approximately 90 colony-forming units (CFU) of 35000HP. However, H. ducreyi has a tendency to clump, which causes variation in the actual dose. Data based on infection of 299 participants show a significant effect of dose on pustule formation, which increases by 0.7% per CFU (P = .001). To adjust for potential differences in doses between the resolvers and pustule formers, we excluded 15 participants who had been inoculated with 35000HP doses of <34 CFU and >130 CFU.

From the remaining 126 persons, 19 samples were lost and 2 samples were not amplifiable; thus, we recovered amplifiable DNA from 105 participants. The participants were divided into European American and African American cohorts on the basis of self-report. Each cohort was divided into 4 groups of individuals, with 0 pustules (resolvers) or 1, 2, or 3 pustules (pustule formers) at 35000HP-inoculated sites. The participants included 59 European Americans (33 males and 26 females; age range, 21–59 years; mean age [±standard deviation {SD}], 36.3 ± 11.8 years) and 46 African Americans (29 males and 17 females; age range, 21–64 years; mean age [±SD], 42.3 ± 10.6 years; Figure 1).

Ethics Statement

Study protocols and informed consent statements were approved by the Division of Microbiology and Infectious Diseases of the National Institutes of Allergy and Infectious Diseases and by the Institutional Review Board of Indiana University.

DNA Isolation

Peripheral blood mononuclear cells (PBMCs) were isolated from whole-blood specimens, using the Accuspin System–Histopaque-1077 kit (Sigma-Aldrich). DNA was isolated from PBMCs by using the High Pure PCR Template Preparation Kit (Roche Applied Science).

SNP Determination

The isolated DNA was genotyped for 14 SNPs in 7 genes (Table 1), using real-time PCR assays on the LightCycler 480 (Roche Molecular Diagnostics, Almere, the Netherlands). The PCR conditions were as follows: initial denaturation at 95°C for 10 minutes, followed by 45 cycles of denaturation at 95°C for 10 seconds, annealing at 60°C for 60 seconds, and elongation at 72°C for 1 second. For the SNP IL10 –1082 A > G, annealing was done at 55°C for 1 minute each cycle. The primer and probe sequences used in these assays are specimen in Supplementary File 1.

Table 1.

Genetic Characteristics Analyzed in This Study

Gene, SNP(s) Allele rs Number Haplotype Configurations at Select Loci
TLR2
 −16 934 T > A rs4696480 TG/TA/AG
 +2477 G > A rs5743708 TG/TA/AG
TLR4
 +896 A > G rs4986790
TLR9
 −1237 T > C rs5743836 TA/TG/CA/CG
 +2848 A > G rs352140 TA/TG/CA/CG
NOD1
 +32 656 T > GG rs6958571
NOD2
 +2104 C > T rs2066844
 +3020 C insertion rs2066847
SIGIRR
 −146 G > T rs7396562 GCA/GCG/TTG/TTA
 +53 C > T rs4074794 GCA/GCG/TTG/TTA
 +935 G > A rs3210908 GCA/GCG/TTG/TTA
IL10
 −2849 A > G rs6703630 AAC/AAT/AGC/GAC/GGC/AGT/GGT
 −1082 A > G rs1800896 AAC/AAT/AGC/GAC/GGC/AGT/GGT
 −819 C > T rs1800871 AAC/AAT/AGC/GAC/GGC/AGT/GGT

Abbreviations: rs, reference SNP cluster identification; SNP, single-nucleotide polymorphism.

Statistical Analyses

Statistical analyses were performed using GraphPad Instat 3. Results between sample groups were examined for Hardy-Weinberg equilibrium. χ2 tests for trends were performed where appropriate to assess differences in genotype distributions between the groups (0, 1, 2, or 3 pustules). Haplotype distribution (Table 1) was inferred using PHASE software and analyzed using χ2 tests for trends. Carrier trait analyses were performed to examine synergy in protective or risk-enhancing associations of different SNPs and haplotypes. To reduce data complexity, binary logistic regression was performed using SPSS v20.

Analysis of H. ducreyi CpG Motifs

To determine the potential immunostimulatory activity of 35000HP DNA, we calculated the CpG index for H. ducreyi exactly as described previously [28, 29]. The results for H. ducreyi were compared to those calculated previously for Streptococcus pneumoniae, Neisseria meningitidis, and Haemophilus influenzae.

RESULTS

Genotyping Results

Amplifiable DNA was recovered from 105 persons who were infected with H. ducreyi and met inclusion criteria. The participants included 59 European Americans and 46 African Americans who formed 0, 1, 2, or 3 pustules (Figure 1). In each cohort, there were no significant differences in the doses of H. ducreyi among the 4 outcome groups (data not shown). Table 2 shows the overall frequency of the genotypes in each cohort.

Table 2.

Genotype Frequencies, by Study Cohort

Gene, SNP(s) Allele European American Cohort
African American Cohort
WT HZ MT WT HZ MT
TLR2
 −16 934 T > A 6 (10) 27 (48) 26 (44) 23 (50) 20 (43) 3 (7)
 +2477 G > A 54 (92) 5 (8) 0 (0) 45 (98) 1 (2) 0 (0)
TLR4
 +896 A > G 52 (88) 7 (12) 0 (0) 39 (85) 7 (15) 0 (0)
TLR9
 −1237 T > C 46 (78) 11 (19) 2 (3) 13 (28) 24 (52) 9 (19)
 +2848 A > G 19 (32) 28 (47) 12 (20) 2 (4) 27 (59) 17 (37)
NOD1
 +32 656 T > GG 35 (59) 22 (37) 2 (3) 24 (52) 17 (37) 5 (11)
NOD2
 +2104 C > T 52 (88) 7 (12) 0 (0) 46 (100) 0 (0) 0 (0)
 +3020 C insertion 54 (92) 5 (8) 0 (0) 46 (100) 0 (0) 0 (0)
SIGIRR
 −146 G > T 47 (80) 10 (17) 2 (3) 21 (46) 22 (48) 3 (7)
 +53 C > T 47 (80) 10 (17) 2 (3) 21 (46) 22 (48) 3 (7)
 +935 G > A 27 (46) 25 (42) 7 (12) 41 (89) 4 (9) 1 (2)
IL10
 −2849 A > G 36 (61) 20 (34) 3 (5) 25 (54) 16 (35) 5 (11)
 −1082 A > G 20 (34) 25 (42) 14 (24) 15 (33) 23 (50) 8 (17)
 −819 C > T 27 (48) 26 (44) 6 (9) 18 (39) 22 (48) 6 (13)

Data represent the number of persons and (their percentage) in each cohort.

Abbreviations: HZ, heterozygous; MT, mutant allele; SNP, single-nucleotide polymorphism; WT, wild type.

We assessed potential links between SNPs and haplotypes and the outcome of infection by using χ2 tests. Within each ethnicity, χ2 tests for trend on the SNPs and haplotypes showed multiple significant results (Figures 2 and 3). There were significant protective associations against pustule formation for the TLR9 +2848 GG (P = .004) and *G (P = .041) genotypes and for the IL10 AGC haplotype (P = .009) in the European American cohort. A significant risk-enhancing association for pustule formation was found for the haplotype TLR9 TA in the European American cohort (P = .005); a borderline risk-enhancing association was found for the haplotype IL10 AAC (P = .058) in the African American cohort. No significant results were found for the other analyzed SNPs or haplotypes.

Figure 2.

Figure 2.

Bar plots and trend lines for single-nucleotide polymorphisms (SNPs) and haplotypes found to have significant effects on the outcome of experimental infection in European Americans, using χ2 tests for trend. The data show the percentage of volunteers who carried a particular SNP or haplotype in the 4 outcome groups. Analyses are shown for TLR9 +2848 *G genotype (A), TLR9 +2848 GG genotype (B), TLR9 haplotype TA (C), and IL10 haplotype AGC (D). The data in panels A, B, and D show protective effects against pustule formation, while the data in panel C show a risk-enhancing effect.

Figure 3.

Figure 3.

Bar plot and trend line for the IL10 AAC haplotype, which had a significant risk-enhancing effect on the outcome of experimental infection in African Americans, using χ2 tests for trend. The data shows the percentage of volunteers who carried this haplotype in the 4 outcome groups.

Carrier Trait Analyses

We assessed the synergy in protective or risk-enhancing associations between combined SNPs or haplotypes and the outcome of infection by χ2 tests for trends. Two combinations of variables showed a significant association with the severity of H. ducreyi infection. In the European American cohort, only the TLR9 +2848 *G genotype combined with the IL10 AGC haplotype had an increased significance of a protective effect as compared to any of the single SNPs (P = .012). In the African American cohort, the IL10 –2849 *G genotype combined with the SIGIRR TTG haplotype had an increased significance of a protective effect as compared to single SNPs or haplotypes (P = .02).

Logistic Regression

We used forward stepwise binary logistic regression with dichotomized groups of the formed pustules as the dependent variable to produce models for each cohort. Only variables with a P value of <.2 in the χ2 tests for trend were included in the models. In the European American cohort, the model included SNPs at TLR2 −16934, TLR9 +2848, and SIGIRR +935; the TLR9 haplotype TG; and the IL10 haplotypes AGC and GGC. In the African American cohort, the model included SNPs at IL10 –819 and IL10 –2849, the SIGIRR haplotype TTG, and the IL10 haplotype AAC. The major results are shown in Table 3. In the European American cohort, there was a trend toward a protective association with the TLR9 +2848 GG genotype (P = .052); in the African American cohort, the IL10 –2849 AA genotype showed a significant protective association (P = .032), and the IL10 AAC haplotype had a significant risk-enhancing association (P = .024). In general, these results were consistent with the trends analysis shown in Figures 2 and 3. No significant results were found for the other analyzed SNPs and haplotypes.

Table 3.

Results of Logistic Regression on Probable Association Models

Genotype/Haplotype Outcomea Cohort P ORb (95% CI)
TLR9 +2848 GG 1, 2, or 3 vs 0 European American .052 0.42 (.17–1.01)
IL10 –2849 AA 1, 2, or 3 vs 0 African American .032 0.18 (.04–.86)
IL10 AAC Haplotype 1, 2, or 3 vs 0 African American .024 3.08 (1.16–8.13)

Abbreviations: CI, confidence interval; OR, odds ratio.

a Group dichotomization by outcome (0, 1, 2, or 3 pustules).

b An OR of <1 indicates a protective effect, and an OR of >1 indicates a risk-enhancing effect.

Calculated CpG Index

Since TLR9 is activated by CpG motifs in bacterial DNA, we calculated a CpG index for 35000HP DNA and compared it to results previously described for several other bacterial pathogens [28]. While a CpG index of <1 is considered immunoinhibitory, a CpG index of >1 is regarded as immunostimulatory. The calculated CpG index for H. ducreyi was 6.6, which was similar to the indices calculated for S. pneumoniae and H. influenzae (Table 4).

Table 4.

Calculated CpG Indices

Genome
Consensus CpG Motifa
Bacterium Size, Mb G+C, % CpG Motifs/kbb Total CpGc Stimulatory, %d Inhibitory, %e CpG Indexf
Haemophilus ducreyi 1.7 38.2 40.9 112.2 124.8 110.4 6.6
Haemophilus influenzaeg 1.91 38.2 72.8 109.1 105.5 96.4 7.2
Streptococcus pneumoniaeg 2.22 39.5 78.0 69.5 82.4 66.5 8.6
Neisseria meningitidisg 2.27 51.5 132.7 130.6 78.4 140.0 −106.8

a Deviations in specified motif occurrence, relative to those expected on the basis of genomic G+C content.

b No. of CpG hexamer motifs (NNCGNN) in each genome, normalized to 100 kb of DNA.

c Total frequency of CpG hexamer motifs (NNCGNN).

d Frequency of stimulatory CpG hexamer motifs (RRCGYY).

e Frequency of inhibitory CpG hexamer motifs (NCCGNN and NNCGRN).

f Calculated as the difference between stimulatory and inhibitory hexamer motifs, multiplied by the total number of CpG hexamer motifs, normalized to 1 kb.

g Data are taken from Table 3 of the article by Sanders et al [28].

DISCUSSION

Here we sought to find contributions of host immunogenetic factors on the outcome of experimental H. ducreyi infection. Because Hardy-Weinberg equilibrium showed differences in the genotypes of the African Americans and European Americans, these cohorts were analyzed separately. Our cohorts were unique in that the participants had clearly distinguishable phenotypes and could be placed into defined groups (0, 1, 2, or 3 pustules), which allowed us to do a trend analysis. Despite our small sample size, the fact that all our participants were infected with H. ducreyi likely permitted us to find significant genetic associations with disease outcomes.

In the European American cohort, we found that the tendency to resolve experimental infection was associated with the TLR9 +2848 *G and GG genotypes, but the TA haplotype of this gene showed a risk-enhancing effect for pustule formation. In contrast, Sanders et al showed a protective association for TLR9 +2848 GA or AA alleles in control children versus those with bacterial meningitis in the Netherlands; the protective effect is against N. meningitidis but not against S. pneumoniae or H. influenzae [28]. The TLR9 +2848 AA genotype is also associated with a decreased incidence of positive blood culture results among children who have meningococcal meningitis, again suggesting that some degree of protection against N. meningitidis is conferred by this genotype [30].

One explanation of the different effects of these TLR9 alleles on susceptibility to bacterial infection could be that the activation of TLR9 is triggered by binding of unmethylated bacterial CpG DNA motifs, which lead to the production of inflammatory cytokines [31]. The amount and structure of CpG motifs in bacterial DNA affect its ability to activate TLR9; calculated CpG indices of >1 are proinflammatory, while indices of <1 are antiinflammatory [28, 29]. The calculated CpG index for N. meningitidis is very low (−106.8) relative to that for S. pneumoniae (8.6) and for H. influenzae (7.2). These data led to the hypothesis that the TLR9 +2848 GA or AA alleles might compensate for the antiinflammatory potential of meningococcal DNA and protect the host against disease [28]. The CpG index of H. ducreyi 35000HP DNA, calculated by the same method [28, 29], was 6.6. Since pustule formation is marked by hyperinflammatory responses in tissue and dendritic cells [22], perhaps the TLR9 +2848 *G and GG alleles counter hyperinflammatory responses to H. ducreyi that lead to tissue damage. Similarly, in Ghanaian children with malaria, the TLR9 +2848 GG genotype is not associated with protection against parasitemia (ie, infection) but is associated with protection from symptomatic disease (ie, inflammation) [32]. In our cohort, the contrasting result found for the TLR9 TA haplotype may be due to the fact that this haplotype lacks the protective TLR9 +2848 *G and GG genotypes. Since TLR9 +2848 G is a synonymous coding SNP, how this SNP affects TLR9 expression and subsequent activity is unclear.

Variation in IL10 polymorphisms and IL-10 production are linked to various immunosuppressive or inflammatory conditions. In our study, we found that the IL10 –2849 AA genotype in the African American cohort had a statistically significant protective effect against pustule formation. Two studies reported an association between IL10 –2849 AA and low IL–10 production by endotoxin-stimulated whole blood [33, 34]. The finding that IL10 –2849 AA is associated with resolution is consistent with our previous report showing that DCs derived from resolvers have less IL-10 transcription and secretion than pustule formers in response to H. ducreyi [22]. IL-10 is an antiinflammatory cytokine that inhibits the activation and function of T cells, NK cells, and macrophages [35]. Production of high levels of IL-10 by DCs during H. ducreyi infection could promote T-helper type 2 (Th2) cell and regulatory T-cell responses and inhibit the activation of Th1 cells and macrophages, leading to impaired clearance of H. ducreyi [22].

The IL10 AGC haplotype had a protective effect on H. ducreyi infection in the European American cohort, while the IL10 AAC haplotype showed a risk-enhancing effect in the African American cohort. Several studies suggest that protection against infection is linked to haplotypes producing low levels of IL-10, while risk enhancement is linked to haplotypes producing high levels of IL-10 [36, 37]. The AAC haplotype has been shown and the ACG haplotype assumed to be producers of low levels of IL-10, owing to the inclusion of genotype IL10 –2849 A [36]. If this is the case, one would expect both haplotypes to be protective against H. ducreyi. However, the levels of IL-10 expression could be influenced by IL10 –1082 genotypes; PBMCs from European cohorts with the IL10 –1082 GG genotype secrete more IL-10 than those with the IL10 –1082 AA genotype in response to C. trachomatis [38]. Similarly, H. pylori–infected patients with the IL10 –1082 GG genotype express more IL-10 in mucosal biopsy specimens than those with the AA genotype [37]. Additionally, the general genetic background of the European American and African American cohorts might affect IL-10 expression. As no plasma or peripheral blood samples were available from the H. ducreyi–infected cohorts, we were unable to correlate their IL-10 secretion capacity with the 2 IL-10 haplotypes.

In the European American cohort, the TLR9 +2848 *G genotype combined with the IL10 AGC haplotype had an increased significance of a protective effect as compared to the single SNPs, which may be due to the potential antiinflammatory effects of both SNPs discussed above. In the African American cohort, the IL10 –2849 *G genotype combined with the SIGIRR TTG haplotype also had an increased significance of a protective effect. The IL10 –2849 *G genotype is associated with high production of IL-10 [33, 34]. SIGIRR is a negative regulator of the TLR pathways, and SIGIRR deficiency in mice leads to hyperinflammatory response and tissue damage in microbial infections [39]. Currently, there are no other reports on associations of the SIGIRR TTG haplotype with any inflammatory conditions. The SIGIRR –146TT genotype, which is contained in the TTG haplotype, is significantly associated with the susceptibility to systemic lupus erythematosus [40]. Perhaps hyperinflammatory responses potentially conferred by the SIGIRR TTG haplotype are offset by potentially higher levels of IL-10 induced by the IL10 –2849 *G genotype, leading to a balanced inflammatory response against H. ducreyi and effective clearance of the pathogen.

In the human challenge model, there are no effects of race or age on pustule formation, but men form pustules at rates approximately 1.7 fold higher than women, consistent with the high male to female ratio seen in natural chancroid [1]. Men and women were included in this study. Analysis for potential sex-related influences on the results, using Mantel-Haenszel tests in conjunction with the Tarone tests, showed no significant differences between results related to sex.

Since differences in innate immune responses are associated with the outcome of H. ducreyi infection, we chose to include genes only from innate immune pathways in this study. One effect of this targeted approach was a reduced need for corrections for multiple comparisons. In addition, the statistical tests used in this study provide a clear picture through both univariate and multivariate testing, while the logistic regression model already accounts for multiple comparisons in its design.

Although we found associations between TLR9 and IL10 SNPs with outcome, no significant links were found for other SNPs in several other genes encoding PRRs. Compared to most immunogenetic studies, which usually compare large groups of infected patients to healthy controls, our cohorts were small; it is possible that the lack of finding other associations was due to our small sample size.

In summary, this is the first study to shed light on the immunogenetic factors affecting the outcome of H. ducreyi infection. Our results could be used to predict the risk of susceptibility to H. ducreyi infection in future studies. Studies on the effects of the TLR9, IL10, and SIGIRR SNPs on immune responses to H. ducreyi are also needed to gain better understanding of differential host susceptibility to the pathogen.

Supplementary Data

Supplementary materials are available at http://jid.oxfordjournals.org. Consisting of data provided by the author to benefit the reader, the posted materials are not copyedited and are the sole responsibility of the author, so questions or comments should be addressed to the author.

Supplementary Data

Notes

Acknowledgments. We thank the volunteers who participated in the study; Diane Janowicz, Kate Fortney, Sheila Ellinger, and Beth Zwickl, who were involved in the infection experiments; Barry Katz and Susan Ofner, for their help in designing the cohorts; Jolein Pleijster and James Williams, for technical support; Tatiana Foroud, for her advice; and Byron Batteiger and Margaret Bauer, for their thoughtful criticism of the manuscript.

Financial support. This work was supported by the National Institutes of Health (grants U19 AI31494, AI27863S1, and AI059384 to S. M. S.) and the Indiana Clinical and Translational Sciences Institute and the Indiana Clinical Research Center (grant UL RR052761 for the human challenge trials).

Potential conflicts of interest. All authors: No reported conflicts. All authors have submitted the ICMJE Form for Disclosure of Potential Conflicts of Interest. Conflicts that the editors consider relevant to the content of the manuscript have been disclosed.

References

  • 1.Spinola SM. Chancroid and Haemophilus ducreyi. In: Holmes KK, Sparling PF, Stamm WE, et al, eds. Sexually transmitted diseases. 4th ed. New York: McGraw-Hill, 2008:689–99. [Google Scholar]
  • 2.Lewis DA. Epidemiology, clinical features, diagnosis and treatment of Haemophilus ducreyi - a disappearing pathogen? Expert Rev Anti Infect Ther 2014; 12:687–96. [DOI] [PubMed] [Google Scholar]
  • 3.Gonzalez-Beiras C, Marks M, Chen CY, Roberts S, Mitja O. Epidemiology of Haemophilus ducreyi Infections. Emerg Infect Dis 2016; 22: 1–8. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 4.Mitjà O, Lukehart SA, Pokowas G et al. Haemophilus ducreyi as a cause of skin ulcers in children from a yaws-endemic area of Papua New Guinea: a prospective cohort study. Lancet Global Health 2014; 2:e235–e41. [DOI] [PubMed] [Google Scholar]
  • 5.Marks M, Chi KH, Vahi V et al. Haemophilus ducreyi associated with skin ulcers among children, solomon islands. Emerg Infect Dis 2014; 20:1705–7. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 6.Ghinai R, El-Duah P, Chi KH et al. A cross-sectional study of 'yaws’ in districts of ghana which have previously undertaken azithromycin mass drug administration for trachoma control. PLoS Negl Trop Dis 2015; 9:e0003496. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 7.Lewis DA, Mitja O. Haemophilus ducreyi: from sexually transmitted infection to skin ulcer pathogen. Curr Opin Infect Dis 2016; 29:52–7. [DOI] [PubMed] [Google Scholar]
  • 8.Spinola SM, Wild LM, Apicella MA, Gaspari AA, Campagnari AA. Experimental human infection with Haemophilus ducreyi. J Infect Dis 1994; 169:1146–50. [DOI] [PubMed] [Google Scholar]
  • 9.Janowicz DM, Ofner S, Katz BP, Spinola SM. Experimental infection of human volunteers with Haemophilus ducreyi: fifteen years of clinical data and experience. J Infect Dis 2009; 199:1671–9. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 10.Spinola SM, Bong CTH, Faber AL et al. Differences in host susceptibility to disease progression in the human challenge model of Haemophilus ducreyi infection. Infect Immun 2003; 71:6658–63. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 11.Janowicz DM, Tenner-Racz K, Racz P et al. Experimental infection with Haemophilus ducreyi in persons who are infected with HIV does not cause local or augment systemic viral replication. J Infect Dis 2007; 195:1443–51. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 12.Palmer KL, Schnizlein-Bick CT, Orazi A et al. The immune response to Haemophilus ducreyi resembles a delayed-type hypersensitivity reaction throughout experimental infection of human subjects. J Infect Dis 1998; 178:1688–97. [DOI] [PubMed] [Google Scholar]
  • 13.Li W, Janowicz DM, Fortney KR, Katz BP, Spinola SM. Mechanism of human natural killer cell activation by Haemophilus ducreyi. J Infect Dis 2009; 200:590–8. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 14.Li W, Tenner-Racz K, Racz P et al. Role played by CD4+FOXP3+ regulatory T Cells in suppression of host responses to Haemophilus ducreyi during experimental infection of human volunteers. J Infect Dis 2010; 201:1839–48. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 15.Popov A, Abdullah Z, Wickenhauser C et al. Indoleamine 2,3-dioxygenase-expressing dendritic cells form suppurative granulomas following Listeria monocytogenes infection. J Clin Invest 2006; 116:3160–70. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 16.Bauer ME, Goheen MP, Townsend CA, Spinola SM. Haemophilus ducreyi associates with phagocytes, collagen, and fibrin and remains extracellular throughout infection of human volunteers. Infect Immun 2001; 69:2549–57. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 17.Bauer ME, Townsend CA, Ronald AR, Spinola SM. Localization of Haemophilus ducreyi in naturally acquired chancroidal ulcers. Microbe Infect 2006; 8:2465–8. [DOI] [PubMed] [Google Scholar]
  • 18.Wood GE, Dutro SM, Totten PA. Haemophilus ducreyi inhibits phagocytosis by U-937 cells, a human macrophage-like cell line. Infect Immun 2001; 69:4726–33. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 19.Vakevainen M, Greenberg S, Hansen EJ. Inhibition of phagocytosis by Haemophilus ducreyi requires expression of the LspA1 and LspA2 proteins. Infect Immun 2003; 71:5994–6003. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 20.Mock JR, Vakevainen M, Deng K et al. Haemophilus ducreyi targets Src family protein tyrosine kinases to inhibit phagocytic signaling. Infect Immun 2005; 73:7808–16. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 21.Janowicz DM, Fortney KR, Katz BP et al. Expression of the LspA1 and LspA2 proteins by Haemophilus ducreyi is required for virulence in human volunteers. Infect Immun 2004; 72:4528–33. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 22.Humphreys T, Li L, Li X et al. Dysregulated immune profiles for skin and dendritic cells are associated with increased host susceptibility to Haemophilus ducreyi infection in human volunteers. Infect Immun 2007; 75:5686–97. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 23.van Rensburg JJ, Lin H, Gao X et al. The human skin microbiome associates with the outcome of and is influenced by bacterial infection. mBio 2015; 6:e01315–15. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 24.den Hartog JE, Lyons JM, Ouburg S et al. TLR4 in Chlamydia trachomatis infections: knockout mice, STD patients and women with tubal factor subfertility. Drugs Today (Barc) 2009; 45(suppl B):75–82. [PubMed] [Google Scholar]
  • 25.Ouburg S, Lyons JM, Land JA et al. TLR9 KO mice, haplotypes and CPG indices in Chlamydia trachomatis infection. Drugs Today (Barc) 2009; 45(suppl B):83–93. [PubMed] [Google Scholar]
  • 26.Marra CM, Sahi SK, Tantalo LC et al. Toll-like receptor polymorphisms are associated with increased neurosyphilis risk. Sex Transm Dis 2014; 41:440–6. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 27.Geisler WM, Wang C, Tang J, Wilson CM, Crowley-Nowick PA, Kaslow RA. Immunogenetic correlates of Neisseria gonorrhoeae infection in adolescents. Sex Transm Dis 2008; 35:656–61. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 28.Sanders MS, van Well GT, Ouburg S, Lundberg PS, van Furth AM, Morre SA. Single nucleotide polymorphisms in TLR9 are highly associated with susceptibility to bacterial meningitis in children. Clin Infect Dis 2011; 52:475–80. [DOI] [PubMed] [Google Scholar]
  • 29.Lundberg P, Welander P, Han X, Cantin E. Herpes simplex virus type 1 DNA is immunostimulatory in vitro and in vivo. J Virol 2003; 77:11158–69. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 30.Sanders MS, van Well GT, Ouburg S, Morre SA, van Furth AM. Toll-like receptor 9 polymorphisms are associated with severity variables in a cohort of meningococcal meningitis survivors. BMC Infect Dis 2012; 12:112. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 31.Bauer S, Kirschning CJ, Hacker H et al. Human TLR9 confers responsiveness to bacterial DNA via species-specific CpG motif recognition. Proc Natl Acad Sci U S A 2001; 98:9237–42. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 32.Omar AH, Yasunami M, Yamazaki A et al. Toll-like receptor 9 (TLR9) polymorphism associated with symptomatic malaria: a cohort study. Malaria J 2012; 11:168. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 33.Westendorp RG, van Dunne FM, Kirkwood TB, Helmerhorst FM, Huizinga TW. Optimizing human fertility and survival. Nat Med 2001; 7:873. [DOI] [PubMed] [Google Scholar]
  • 34.de Jong BA, Westendorp RG, Eskdale J, Uitdehaag BM, Huizinga TW. Frequency of functional interleukin-10 promoter polymorphism is different between relapse-onset and primary progressive multiple sclerosis. Human Immunol 2002; 63:281–5. [DOI] [PubMed] [Google Scholar]
  • 35.Mannino MH, Zhu Z, Xiao H, Bai Q, Wakefield MR, Fang Y. The paradoxical role of IL-10 in immunity and cancer. Cancer Lett 2015; 367:103–7. [DOI] [PubMed] [Google Scholar]
  • 36.Thye T, Browne EN, Chinbuah MA et al. IL10 haplotype associated with tuberculin skin test response but not with pulmonary TB. PLoS One 2009; 4:e5420. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 37.Rad R, Dossumbekova A, Neu B et al. Cytokine gene polymorphisms influence mucosal cytokine expression, gastric inflammation, and host specific colonisation during Helicobacter pylori infection. Gut 2004; 53:1082–9. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 38.Ohman H, Tiitinen A, Halttunen M et al. IL-10 polymorphism and cell-mediated immune response to Chlamydia trachomatis. Genes Immun 2006; 7:243–9. [DOI] [PubMed] [Google Scholar]
  • 39.Garlanda C, Anders HJ, Mantovani A. TIR8/SIGIRR: an IL-1R/TLR family member with regulatory functions in inflammation and T cell polarization. Trends Immunol 2009; 30:439–46. [DOI] [PubMed] [Google Scholar]
  • 40.Zhu Y, Wang DG, Yang XK et al. Emerging role of SIGIRR rs7396562(T/G) polymorphism in systemic lupus erythematosus in a Chinese population. Inflammation 2014; 37:1847–51. [DOI] [PubMed] [Google Scholar]

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