Abstract
Purpose of Review
Health and Demographic Surveillance Systems (HDSS), in conjunction with HIV treatment cohorts, have made important contributions to our understanding of the impact of HIV treatment and treatment-related interventions in sub-Saharan Africa. The purpose of this review is to describe and discuss innovations in data collection and data linkage that will create new opportunities to establish the impacts of HIV treatment, as well as policies affecting the treatment cascade, on population health, economic and social outcomes.
Recent Findings
Novel approaches to routine collection of (i) biomarkers, (ii) behavioural data, (iii) spatial data, (iv) social network information, (v) migration events and (vi) mobile phone records can significantly strengthen the potential of HDSS to generate exposure and outcome data for causal analysis of HIV treatment impact and policies affecting the HIV treatment cascade. Additionally, by linking HDSS data to health service administration, education, and welfare service records, researchers can substantial broaden opportunities to establish how HIV treatment affects health and economic outcomes, when delivered through public-sector health systems and at scale.
Summary
As the HIV treatment scale-up in sub-Saharan Africa enters its second decade, it is becoming increasingly important to understand the long-term causal impacts of large-scale HIV treatment and related policies on broader population health outcomes, such as non-communicable diseases, as well as on economic and social outcomes, such as family welfare and children’s educational attainment. By collecting novel data and linking existing data to public-sector records, HDSS can create near-unique opportunities to contribute to this research agenda.
Keywords: Health and Demographic Surveillance, treatment Cohorts, data collection, data linkage, biomeasures
Introduction
Together with HIV treatment cohorts, Health and Demographic Surveillance Systems (HDSS) have made important contributions to our understanding of the HIV epidemic and the impact of interventions against it (1–3). This article discusses innovations in data collection in HDSS to create novel opportunities to generate data on the HIV treatment cascade and to establish the causal impacts of policies and interventions intended to improve progression through the cascade.
Health and Demographic Surveillance (Dynamic Longitudinal Population-based Cohorts)
HDSS (4–6) follow entire geographically defined populations through regular household surveys to establish a longitudinal database of individuals and social units in surveillance areas. These population-based and open cohorts allow the monitoring of population mortality and life expectancy over time (7, 8), and consequently the impact of interventions such as the introduction of antiretroviral therapy (ART) on mortality and life expectancy (3, 9), as well as on a wide range of economic, social and behavioural outcomes. Typically, in HDSS verbal autopsies (10–12) are used to determine cause-specific mortality including HIV-related mortality (13–15). Some HDSS regularly collect HIV serostatus from the survey population (16, 17) providing further insight into the epidemiology of HIV, such as the direct measurement of HIV incidence (18), the spatial distribution of HIV risk (19), and treatment uptake among HIV-infected individuals from a population perspective. HDSS data has previously been used to show the full population impacts of ART on life expectancy (3) and HIV transmission (2), as well as the causal effects of ART on employment (20), education, contraception (21), and health care seeking (22). The ability to study causal impacts of ART on outcome variables collected in HDSS is gained through data linkage between the population-based HDSS data and clinical HIV treatment exposure. HDSS data can be linked to two broad categories of clinical cohorts: health systems cohorts of patients in routine care and treatment cohorts specifically designed for research.
Health System Data Collection
Of the approximately 12 million people globally receiving ART more than 8 million live in Sub-Saharan Africa (SSA) (23). However, health services in SSA are often overburdened and high-quality medical records are not typically available. Nevertheless, as the region with the highest HIV burden, it is in SSA where the biggest need exists for accurate data on the treatment cascade. The Africa Centre for Health and Population Studies (24) and other HDSS in SSA have pioneered linkage of routine HIV treatment health systems data to population-based data at the level of the individual. Typically, these initiatives have included investments in improved public-sector data collection systems and extraction of data from patient records. Electronic record systems can play an important role in facilitating such data linkage (25–31). While potentially limited in content, when widely implemented and of sufficient quality, electronic medical records capturing the care of patients in routine HIV care have the benefit of providing access to much larger patient numbers than can be managed through treatment cohorts that are specifically funded and managed for research purposes. In South Africa, the country with the highest number of individuals on ART, approximately two-thirds of the nationwide close to 4000 public-sector ART clinics have fully implemented an electronic patient register (32). Rolling out electronic record systems more widely across SSA could benefit both clinical care, and our ability to understand how ART is affecting outcomes in routine care and at the population level.
Specific treatment Cohorts
In addition to “health systems” treatment cohorts, there are essentially two types of treatment cohort designs commonly adopted in HIV research. First, there is the traditional fixed cohort (such as the Multicenter AIDS Cohort Study or MACS (33)), in which patients are specifically recruited and follow a defined visit structure, such as six or twelve monthly, with standardised assessments made on all patients at each visit. Second, and much more common, are observational cohorts (such as EuroSIDA (34) and the Australian HIV Observational Database or AHOD (35)), in which patients are passively followed, and data is largely collected through routine medical care visits. Fixed cohorts have the advantage of standardised measurements on all patients at a fixed visit structure, making statistical analysis and inferences easier. Observational cohorts, often based on electronic medical records, are much cheaper and easier to maintain, and arguably more accurately reflect true patient care and outcomes. Larger multi-cohort collaborations have also been successfully established. The Data collection on Adverse events of Anti-HIV Drugs (D:A:D) study is a multi-cohort collaboration across Europe, America and Australia (36), which assesses the effect of ART on long-term clinical outcomes, such as cardiovascular disease, cancer, and liver and kidney failure.
The relationship between “health systems” cohorts and specific treatment cohorts maintained primarily for research purposes is fluid, because specific treatment cohorts are often build on health systems core data. For instance in the International epidemiological Database to Evaluate AIDS (IeDEA) data from many different sites, including public-sector HIV treatment programmes, are pooled and jointly curated (37, 38), allowing research across time and different geographical regions.
Observational cohort data have been, and will remain, useful in monitoring how changes in treatment and management guidelines actually result in changes in treatment of HIV-positive patients. For example, treatment guidelines have rapidly changed over the last few years from starting ART at CD4<200 cells/µL, to CD4<350 cells/µL, to CD4<500 cells/µL, and more recently in some countries to no CD4 threshold in key populations. The IeDEA network was able to assess how CD4 count at initiation of ART has actually changed in response to these changes in guidelines, showing that while there have been some trends to earlier ART, treatment initiation still mostly occurs relatively late – at median CD4 counts of less than 150 cells/µL in low and middle income countries (39).
In this paper, we focus on innovations in data collection and data linkage in those HDSS cohorts that have been linked to HIV treatment data available in the routine health system and in specific treatment cohorts. A number of approaches to establish causal relationships have recently been adapted for use with this type of longitudinal data and are increasingly applied to answer causal questions regarding the HIV treatment cascade (40). These approaches include fixed-effects analyses (41), marginal structural models (42), instrumental variable analyses, and regression discontinuity analysis (43–45). These approaches are discussed in another paper in this issue (Bor et al.). The objective of this paper is to introduce novel data opportunities to provide better exposure and outcome measures for causal evaluation of the impacts of HIV treatment as well as health policies and interventions to improve progression through the HIV treatment cascade.
Innovations
To establish causal relationships related to the HIV treatment cascade, the following are needed: (1) data on cascade exposures and outcomes, (2) the ability to link these exposure and outcome data within relevant units of observation, and (3) data structures and approaches sufficient for causal inference. Here, we focus on innovations in building the data infrastructure to enable causal analyses of the HIV treatment cascade using health systems and routine treatment cohort data; Bor et al.’s article in this issue focuses on novel analytical approaches to establish causality in quasi-experimental studies of interventions to improve the HIV treatment cascade.
Novel Data Collection
Additional Biomeasures
To establish the causal impacts of HIV treatment, policies and interventions to improve the HIV treatment cascade at the population level a range of biomarkers of disease will be useful (46). For instance, as a result of the ART scale-up in SSA, a new population is emerging: older adults in SSA who have lived with HIV for more than a decade and have received ART for many years (47). After HIV, cardiovascular disease (CVD) and diabetes are already the most common cause of death and premature mortality in many countries in SSA, such as South Africa (48, 49), and it is expected that survival of HIV-positive populations into old age due to ART will reveal cardiometabolic disease burdens previously “hidden” by high HIV mortality (47, 50). However, the patterns and extent of the expected epidemiological transition from HIV/TB to cardiovascular disease and diabetes due to the ART scale-up in SSA remains largely unknown. Adding detailed biomarker data to existing HDSS on markers of cardiovascular disease and risk (e.g., lipid profiles, creatinine, and markers of long-term blood sugar, such as HbA1c), will create opportunities to establish causal impact of ART on cardiometabolic disease in relevant populations. The range of biological measures available through non-invasive (e.g., hair samples) or minimally invasive (e.g., dried blood spots) techniques are increasing. Table 1 provides a non-exhaustive list of biomeasures currently available on dried blood spots. Biomarkers particularly relevant to population-based HIV research that can be measured using dried blood spots include HIV viral load and the serum concentration of antiretroviral drugs, but also measures of cardiovascular risk (e.g., triglycerides) and diabetes-related measures (e.g., glycated hemoglobin A1c (HbA1c)), which may be affected by antiretroviral therapy. For many important indicators, however, venous blood samples will have to be collected at the population level. Currently, few HDSS routinely collect venous blood, but such data collection is theoretically possible and is likely to be increasingly employed. One approach is to introduce venous blood data collection during the standard HDSS household visits and then, given consent, to send a specialized phlebotomy team to a household for venous blood-letting.
Table 1.
Viral infections | ||
Measure | Use | Method |
HIV (51–53) | Measuring HIV viral load | Nested PCR, RNA assays, RT-PCR |
HIV (54) | HIV serotyping | ELISA |
Hepatitis C virus (52, 55) | Monitoring hepatitis C infection | RT-PCR |
Antibodies to hepatitis C virus (56, 57) | Detecting hepatitis C infection | ELISA |
Human papillomaviruses, hepatitis C virus, and John Cunningham polyomavirus (58) | Detecting infections with the human papilloma virus, hepatitis C virus, or the John Cunningham virus | ELISA multiplex |
Hepatitis B virus (59) | Monitoring hepatitis B infection | RT-PCR |
Antibodies against hepatitis B (60, 61) | Detecting hepatitis B infection | ELISA |
Maternal antibody to hepatitis B (62) | Detecting hepatitis B infection | CORECELL |
Antibodies against hepatitis A virus (63, 64) | Detecting hepatitis A infection | ELISA |
Measles and rubella immunoglobulin M and G (65) | Detection of measles and rubella infection | ELISA |
Rubella virus (66) | Detection of congenital rubella | EIA |
Dengue virus (67) | Diagnosis of dengue virus infection | EIA |
Epstein-Barr virus (68) | Detection of Epstein-Barr virus infection | ELISA |
Human herpes virus type 6 (69, 70) | Differentiation of active from inherited herpes virus type 6 infection | Real-time PCR |
Cytomegalovirus (71, 72) | Detection of human congenital cytomegalovirus infection | Real-time PCR |
Antibody against human T-lymphotropic virus 1 and 2 (73) | Detection of human T-lymphotropic virus infection | ELISA |
Bacterial infections | ||
Measure | Use | Method |
Antibody against syphilis (74) | Diagnosis of syphilis | ELISA |
Antibody against Treponema (75) | Diagnosis of syphilis | Indirect hemagglutination test |
Antibodies against Clostridium tetani (76) | Screening of tetanus and diphtheria toxins | ELISA |
Antibodies against Brucella (77) | Diagnosis of human brucellosis | ELISA |
Antibodies against Coxiella burnetii, Bartonella quintana, and Rickettsia conorii (78) | Diagnosis of Rickettsial diseases | Immuno-fluorescence |
Antibodies against Pseudomonas aeruginosa (79) | Detection of Pseudomonas aeruginosa infection, mostly in patients with cystic fibrosis | ELISA |
Helicobacter pylori (58) | Detection of Helicobacter pylori infection | ELISA multiplex |
Parasitic infections | ||
Measure | Use | Method |
Anti-malarial antibodies (80) | Diagnosis of malaria | ELISA |
Antibody against Trichomonas vaginalis (81) | Seroepidemiology of Trichomonas vaginalis | ELISA |
Antibody against Trypanosoma cruzi (82) | Diagnosis of Trypanosoma cruzi infections | ELISA |
Antibodies against cysticercus (83) | Detection of anti-cysticercus antibodies | ELISA |
Toxoplasma gondii-specific immunoglobulin M and A (84) | Screening for congenital toxoplasmosis | DELFIA |
Cardiovascular risk | ||
Measure | Use | Method |
Apoliproteins B (85) | Diagnosis and monitoring of hypercholesterolemia | ELISA |
Triglycerides (86) | Diagnosis and monitoring of hypertriglyceridemia | Enzymatic method |
C-reactive protein (87–89) | Assessment of cardiovascular risk | ELISA |
Cystatin-C (89) | Assessment of kidney function and cardiovascular risk | ELISA |
Drug concentration | ||
Measure | Use | Method |
HIV antiretroviral drugs (NVP, SQV, ATV, APV, DRV, RTV, LPV, EFV, ETV) (90, 91) |
Monitoring of drug levels and adherence in HIV patients | LC-MS |
Quinine, mefloquine, sulfadoxine, pyrimethamine, lumefantrine, chloroquine (92, 93) | Monitoring of drug levels and adherence in malaria patients | LC/MS |
Cocaine metabolite (benzoylecgonine) (94) | Assessing neonates’ exposure to cocaine | RIA |
Theophylline (95) | Monitoring of drug levels and adherence in obstructive respiratory disease patients | Fluorescence polarization immunoassay |
Cancer screening | ||
Measure | Use | Method |
Prostate specific antigen (96) | Prostate cancer screening | Chemiluminescent immunoassay |
Immunoglobulin G and A (68) | Nasopharyngeal carcinoma screening | ELISA |
Hormonal state and diseases | ||
Measure | Use | Method |
Glycated hemoglobin A1c (HbA1c) (89, 97, 98) | Diagnosis and monitoring of diabetes | Turbidimetric immunoassay |
Insulin (99) | Diagnosis of hyperglycemia/hyper-insulinemia | RIA |
Blood glucose (100) | Monitoring of diabetic patients | Enzymic methods |
Thyroglobulin (101) | Assessing thyroid status | DELFIA |
Thyroxine-binding globulin (102) | Diagnosis of neonatal hypothyroidism | Column chromatography |
Thyroid antibody (103) | Detection of autoimmune thyroid disorders | ELISA |
Thyroxin (T4) and Thyroid stimulating hormone (104) | Diagnosis of congenital hypothyroidism | LC-MS/MS |
Free thyroxine (105) | Assessment of thyroid status | Chemiluminescence |
Luteinizing hormone and follicle-stimulating hormone (106) | Variety of uses | Immuno-fluorometric assays |
Somatedin-C (107) | Screening test for growth hormone deficiency | RIA |
Insulin-like growth factor (108) | Evaluation of growth hormone status | ELISA, RIA |
Genetic diseases | ||
Measure | Use | Method |
Thyroid-stimulating hormone immunoreactive trypsin, creatine kinase MM isoenzyme (109) | Diagnosis of congenital hypothyroidism, congenital adrenal hyperplasia, and muscular dystrophy | Fluorometric immunoassay |
α1-antitrypsin (110) | Diagnosis of α1-antitrypsin deficiency | Immune nephelometry |
α-Fetoprotein (111) | Assessing fetal risk of open neural tube defects and Down syndrome | ELISA |
Biotinidase (112) | Diagnosis of biotinidase deficiency | Enzyme assays |
Ceruloplasmin (113) | Diagnosis of Wilson’s disease | LC-MS/MS |
Free-β human chorionic gonadotrophin and pappalysin-1 (114) | Assessing fetal aneuploidy risk | DELFIA |
Hemoglobin A2 (115) | Diagnosis of thalassemia | LC-MS/MS |
Hypoxanthine-guanine phosphoribosyltransferase, adenine phosphoribosyltransferase, adenosine deaminase (116) | Diagnosis of purine metabolism disorders | Non-radiochemical HPLC |
Iduronate 2-sulfatase (117) | Diagnosis of Hunter disease | LC-MS/MS |
Acid α-glucosidase (118) | Diagnosis of glycogen storage disease II | Enzyme assays |
8 lysosomal enzymes (119) | Clinical differentiation between mucopolysaccharidosis, oligosaccharidosis, and mucolipidosis II and III | Enzyme assays |
α-iduronidase activity (120) | Diagnosis of α-L-iduronidase deficiency | Enzyme assays |
Phytanic acid and pristanic acid (121) | Diagnosis of peroxisomal disorders | Biochemistry |
β-Lipoprotein (122) | Diagnosis of familial type II and combined hyperlipidemia | Electro-immunodiffusion |
Fumarylacetoacetase (123) | Diagnosis of hereditary tyrosinemia type I | ELISA |
Lysosomal b-d-galactosidase (124) | Diagnosis of mucopolisaccharidosis type I | Enzyme assays |
Immunoreactive trypsinogen (125) | Fetal screening for cystic fibrosis | Immunoassay |
Galactose-1-phosphate uridyltransferase (126) | Diagnosis of galactosemia | Fluorescent |
Phenylalanine (127) | Neonatal screening for phenylketonuria | Densitometry |
Homocysteine (128) | Assessment of homocysteinuria | Fluorimetric HPLC method |
17-hydroxyprogesterone, androstenedione (129) | Diagnosis of congenital adrenal hyperplasia | LC-MS/MS |
Free carnitine (130) | Assessment of inborn errors of metabolism | LC-MS/MS |
Guanidinoacetate and creatine (131) | Assessment of primary creatine disorders | FIA-ESI-MS/MS |
Mutations of factor V G1691A, prothrombin G20210A, 5′10′ methylenetetrahydrofolate reductase C677T, and methionine synthase A2756G (132) | Assessment of susceptibility to venous thromboembolism | PCR |
Mutation c.-32T>G (IVS1-13>G) (133) | Diagnosis of acid maltase deficiency | Real-time PCR |
Mutation (IVS4+919G->A) (134) | Diagnosis of Fabry disease | DNA-based assay |
Substitution (c.840C>T) (135) | Assessment of spinal muscular dystrophy | DHPLC |
Mutation of cystic fibrosis transmembrane conductance regulator (136) | Assessment of cystic fibrosis | PCR |
Survival motor neuron (SMN) 1 exon 7 deletions, copy number variations of SMN1 and SMN2 (137) |
Assessment of spinal muscular atrophy | PCR |
Fragile X mental retardation (FMR) 1 gene methylation (138) | Assessment of fragile X syndrome | PCR |
Other | ||
Measure | Use | Method |
Hemoglobin (139) | Variety of clinical uses | Spectrophotometry |
Transferrin receptor (140) | Assessment of iron deficiency | ELISA |
Retinol (141, 142) | Assessment of vitamin A deficiency | HPLC |
Prolactin (143) | Diagnosis of epilepsy | ELISA |
Various inflammatory markers (e.g., tumor growth factor-β1 and C-reactive protein) (144) | Assessment of inflammatory status | Luminex |
Immunoglobulin E (145) | Assessment of allergic disease and repeated macro-parasitic infections | Enzyme immunoassay |
Amino, organic, and fatty acid (146) | Assessment of metabolic disorders | LC-MS/MS |
Dichlorodiphenyldichloroethylene (147) | Assessing the level of environmental pollutants in newborns | Capillary gas chromatography |
Behavioural Data Collection
Measuring health behaviours – including behaviours relevant to the HIV treatment cascade, such as medication adherence – is complicated by the difficulty of validating self-reported behavioural data and the potential for misreporting due to social desirability (148), especially if continued ART provision is believed to be linked to self-reports of behaviours (149). Biases are likely to be exacerbated by verbal responses, since such answers are then known to the interviewer and others within earshot. Self-interview methods (notably computer-assisted self-interviews [CASI]) have been shown to increase reporting of socially undesirable behaviours, particularly sexual behaviour (150, 151). Self-report of HIV diagnosis, engagement in care and ART receipt may thus also be improved by CASI methods, as has been previously proposed (152). The addition of pictorial representations of medications may further improve validity (153). Substantive use of CASI methods in HDSS work has historically been limited by concerns regarding reading and computer literacy. However, increasing availability of audio-CASI methods – where respondents use headphones to listen to questions and response options – and rising market penetration of mobile- and now smart-phones, is making the use of CASI increasingly acceptable and practical.
Community Exposure and Spatial Data
There is increasing recognition of the need to develop explanations of outcomes that incorporate individual and community-level factors and move away from an individual-centred approach to understanding causal relationships (154–156). Many HDSS sites now routinely collect spatial data as part of the ongoing surveillance activities. This spatial data can be used to create community-level exposure variables to use in causal analyses. For example, at our HDSS site in rural KwaZulu-Natal we have shown that, after controlling for multiple variables associated with uptake of ART, an individual living 4.78km from a clinic was 50% less likely to be on ART relative to someone living next to a clinic (157). We have recently demonstrated the causal impact of community coverage of ART in reducing an individual’s risk of HIV acquisition. Holding other key HIV risk factors constant, individual HIV acquisition risk declined significantly with increasing ART coverage in the surrounding local community. For example, an HIV-uninfected individual living in a community with high ART coverage (30 to 40% of all HIV-infected individuals on ART) was 38% less likely to acquire HIV than someone living in a community where ART coverage was low (<10% of all HIV-infected individuals on ART) (2). Adding geographical location data to existing HDSS datasets already including the location of people’s homes, will improve the assessment of access and exposure to public services (such as primary care clinics, HIV testing and counselling facilities, government grant distribution infrastructure, and schools) that can affect progression through the HIV treatment cascade. In using distance to a particular facility, however, it is important to keep in mind that the standard approach to protect individuals’ privacy when working with geo-location data – i.e., adding a random spatial errors to true location coordinates or “scrambling” – will lead to systematic overestimation of the distance between people’s homes and other places, such as facilities where services can be accessed (158).
Network Exposure and Contact Data
Accurate measurement of each step of the treatment cascade is crucial to predicting future population health, and thus required resources. Standard models of resource use implicitly assume that non-testing, non-use of care and non-adherence are random within the population. However, in practice individuals tend to act similarly to their contacts (e.g. friends, family, work colleagues) (159). This homophily has important implications for epidemic control. Typically, homophily implies that greater intervention efforts are required than were behaviour randomly distributed through the population. This requirement arises because interventions evenly spread throughout the population can either entirely miss some high-risk subgroups or have insufficient impact to control transmission from members of these sub-groups. In both cases, the high-risk subgroups will continue to generate new infections. Behaviour patterns can be elicited in surveys either by asking respondents to report on their contacts’ behaviour (egocentric networks), or by gathering contacts’ identifiers and thus building an overall picture (sociocentric networks) (160). Careful modelling that takes account of network structures can then be used to estimate how the HIV epidemic is likely to progress (161, 162), and how it is likely to respond to interventions (163–165), in light of these contact patterns.
Tracking migration events and use of mobile phone data
In another article in this issue we review recent work done on the HIV treatment cascade in migrants and mobile populations.(166) Realizing the full treatment and preventative benefits of the UNAIDS 90-90-90 strategy will require reaching all vulnerable sub-populations of which migrants are a particularly important group. One area that HDSS sites could contribute significantly is the followup of HIV-infected patients who have disengaged from the health-care system. Mobile individuals are at a significantly higher risk of being lost to follow up (LTFU) within ART programs. (167–170) However, typically only a proportion of those declared to be LTFU actually disengage from care. (171) The ability to track people as they move from one area to another area is essential to assure their continued HIV care, and to generate valid estimates of each step of the treatment cascade and as well as objective LTFU rates. (171) Standard HDSS sites typically do not measure outcomes on individuals who are no longer resident in their respective study areas. Some HDSS sites such as the Agincourt and the Africa Centre HDSS in South Africa continue to collect information on household members who are no longer predominantly resident in the study area but who may continue to return intermittently (172–174). While such information can yield valuable information, it does not go far enough. It has recently been estimated that the worldwide penetration rate of cellular phones will soon be 97% with more than 7 billion subscriptions. (175) HDSS sites could harness mobile phone technology to track individuals in time and space, collect information via electronic questionnaires and facilitate the interaction with health care providers. Rather than assuming a single neighbourhood influence, mobile phone technology offers the opportunity to measure the dynamic context surrounding an individual – that is the combination of physical locations the individual occupies in their existence that places him or her at additional risk of adverse health outcomes. The use of mobile health (mHealth) technology to improve HIV treatment outcomes is comprehensively reviewed in this issue(166) and elsewhere. (176)
Data Linkage
The linkage of routine administrative records (177), including medical records, to surveillance populations offers an important opportunity to study the impact of public health intervention on the HIV treatment cascade. Effective record linkage is greatly assisted by broadly-used unique individual identifiers. Most developing countries lack population registration systems that facilitate the availability of such identifiers, and thus linking datasets requires probabilistic linkage techniques (178). HDSSs are in a strong position to collaborate with local authorities to improve the availability of government identity documents in the surveillance population (179), or to issue identity cards to facilitate identification. Linkage to surveillance populations need not be restricted to health service records: linkage to other administrative records could offer additional information or verify self-reported information that would increase our understanding of reasons for failures in the treatment cascade or to evaluate interventions to improve HIV care:
Health Service Administrative Data. Extracts from routine administrative systems, such as human resources, financial and logistics systems can be used to determine the impact of personnel movement and staffing levels in ART programmes on health system outcomes. Access to financial and logistics data will allow for more detailed and ongoing activity costing at service delivery level to better quantify the costs associated with specific interventions.
Education Records. Linkage to school records will provide more detailed information on educational attainment and school absenteeism to broaden our understanding of the impact of interventions and determinants of intervention success.
Welfare Service Records. In countries where individual social support services (e.g. state-sponsored old age pensions, health insurance, child support and disability grants) exist, linkage will allow us to study how these programmes mitigate the impact of HIV-related mortality or morbidity, and affect access to and retention in HIV care.
Other data sources. There are a wide variety of other data sources that could usefully be linked to the population-based data, but where data access barriers or identity disclosure risks currently limit the potential of these data sources. For example access to mobile phone call meta-data could improve our understanding of the role of human mobility in the observation of small scale geographic variability in HIV acquisition risk or on the retention in care of patients.
Conclusions
Health and demographic surveillance systems are excellent scientific infrastructures for establishing population impacts of health interventions, in particular those that affect large proportions of the population, such as HIV treatment in high HIV prevalence settings. Innovations in data collection and data linkage in these surveillance systems can substantially enhance the scientific opportunities to establish the impacts of HIV treatment on outcomes, and the effects of health policies and intervention on the HIV treatment cascade. In particular, recent innovations in data collection can be harnessed to expand and improve the assessment of biomarkers, behavioural data, community exposures and spatial data, and social network and contact data. In particular, biomarkers of high relevance to population-based HIV research, such as HIV viral load and markers for cardiovascular risk, can now be reliably measured using the minimally invasive dried blood spots. Longitudinal and geographically linked data using geographic information systems, monitoring of migration and mobile phone tracking allow individuals to be accurately located in time and place. These data can provide novel and rich data analytical opportunities for the study of HIV treatment impacts and interventions to improve the treatment cascade, when they are nested within the overall population-based cohort data infrastructure that HDSS provide. Additionally, through data linkage, routine medical records, and education and welfare service records can be used to provide novel data on exposures and outcomes that are relevant for studies of the treatment cascade, such as the effects of education on cascade progression.
In order to gain the research opportunities on ART impacts and cascade progression that can become available through innovations in HDSS data collection and data linkages, researchers will need to build scientific infrastructure and political relationships. Particularly important components of the scientific infrastructure include data management specialists, computing environments, and laboratory capacity. Building close relationships with both policy makers and programme managers is crucial not only to gain access to routine programme and administrative data, but also to understand how policies intervene in the data generation processes. These investments in research capacity and relationships with policy-makers aiming to enhance HDSS data are likely to generate large returns, increasing the evidence that is needed to ensure that the ART scale-up can be sustained over the coming decades and continues to improve population health outcomes.
Key points.
This article provides a summary of the role and research potential of health and demographic surveillance systems in advancing knowledge and informing health policies to improve the HIV treatment cascade and ART population impacts.
Particular innovations include expanded and improved collection of biomarkers, behavioural data, community exposures and spatial data, and social network and contact data, which will generate novel exposures and outcomes for causal analyses of the HIV treatment cascade.
Data innovations further include data linkage of HDSS data to routine medical records, and education and welfare service records.
Acknowledgements
None.
Financial support and sponsorship
KH salary is supported through Wellcome Trusts grants 097318 and 097410. PG is partially supported through a Clinton Health Access Initiative grant CHSWAZHTAP10. FT and TB are partially supported through grant R01 HD058482-01 from the National Institute of Child Health and Development, National Institutes of Health (NIH). FT was partially supported by a South African MRC Flagship grant (MRC-RFA-UFSP-01-2013/UKZN HIVEPI).
Footnotes
Conflicts of interest
The authors did not declare any conflict of interest. ML’s institution received funding from Boehringer Ingelheim, Gilead Sciences, Merck Sharp & Dohme, Bristol-Myers Squibb, Janssen-Cilag, ViiV HealthCare. ML received DSMB sitting fees from Sirtes Pty Ltd.
References
- 1.Sankoh O, Arthur SA, Nyide B, Weston M. The history and impact of HIV&AIDS. A decade of INDEPTH research. HIV & AIDS Review. 2014;13:78–84. Epub 7 June 2014. [Google Scholar]
- 2.Tanser F, Barnighausen T, Grapsa E, Zaidi J, Newell ML. High coverage of ART associated with decline in risk of HIV acquisition in rural KwaZulu-Natal, South Africa. Science. 2013;339(6122):966–71. doi: 10.1126/science.1228160. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 3.Bor J, Herbst AJ, Newell ML, Barnighausen T. Increases in adult life expectancy in rural South Africa: valuing the scale-up of HIV treatment. Science. 2013;339(6122):961–5. doi: 10.1126/science.1230413. Epub 2013/02/23. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 4.Sankoh O, Byass P. The INDEPTH Network: filling vital gaps in global epidemiology. Int J Epidemiol. 2012;41(3):579–88. doi: 10.1093/ije/dys081. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 5.Tollman SM, Zwi AB. Health system reform and the role of field sites based upon demographic and health surveillance. Bull World Health Organ. 2000;78(1):125–34. [PMC free article] [PubMed] [Google Scholar]
- 6.Baiden F, Hodgson A, Binka FN. Demographic Surveillance Sites and emerging challenges in international health. Bull World Health Organ. 2006;84(3):163. doi: 10.2471/blt.05.025577. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 7.Sankoh OA, Ngom P, Clark SJ, de Savigny D, Binka F. Levels and Patterns of Mortality at INDEPTH Demographic Surveillance Systems. In: Jamison DT, Feachem RG, Makgoba MW, Bos ER, Baingana FK, Hofman KJ, et al., editors. Disease and Mortality in Sub-Saharan Africa. 2nd ed. Washington (DC): 2006. [PubMed] [Google Scholar]
- 8.Sankoh O, Sharrow D, Herbst K, Whiteson Kabudula C, Alam N, Kant S, et al. The INDEPTH standard population for low- and middle-income countries, 2013. Glob Health Action. 2014;7:23286. doi: 10.3402/gha.v7.23286. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 9.Jahn A, Floyd S, Crampin AC, Mwaungulu F, Mvula H, Munthali F, et al. Population-level effect of HIV on adult mortality and early evidence of reversal after introduction of antiretroviral therapy in Malawi. Lancet. 2008;371(9624):1603–11. doi: 10.1016/S0140-6736(08)60693-5. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 10.Kamali A, Wagner HU, Nakiyingi J, Sabiiti I, Kengeya-Kayondo JF, Mulder DW. Verbal autopsy as a tool for diagnosing HIV-related adult deaths in rural Uganda. Int J Epidemiol. 1996;25(3):679–84. doi: 10.1093/ije/25.3.679. [DOI] [PubMed] [Google Scholar]
- 11.Sankoh O, Byass P. Cause-specific mortality at INDEPTH Health and Demographic Surveillance System Sites in Africa and Asia: concluding synthesis. Glob Health Action. 2014;7:25590. doi: 10.3402/gha.v7.25590. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 12.Byass P, Herbst K, Fottrell E, Ali MM, Odhiambo F, Amek N, et al. Comparing verbal autopsy cause of death findings as determined by physician coding and probabilistic modelling: a public health analysis of 54 000 deaths in Africa and Asia. J Glob Health. 2015;5(1):010402. doi: 10.7189/jogh.05.010402. [* This study showed a high degree of concordance of cause of death determination in verbal autopsies by physicians coding vs. as determined by Inter-VA, an automated, probabilistic mode. to assign cause of death.] [DOI] [PMC free article] [PubMed] [Google Scholar]
- 13.Herbst AJ, Mafojane T, Newell ML. Verbal autopsy-based cause-specific mortality trends in rural KwaZulu-Natal, South Africa, 2000-2009. Popul Health Metr. 2011;9:47. doi: 10.1186/1478-7954-9-47. Epub 2011/08/09. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 14.Byass P, Calvert C, Miiro-Nakiyingi J, Lutalo T, Michael D, Crampin A, et al. InterVA-4 as a public health tool for measuring HIV/AIDS mortality: a validation study from five African countries. Glob Health Action. 2013;6:22448. doi: 10.3402/gha.v6i0.22448. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 15.Streatfield PK, Khan WA, Bhuiya A, Hanifi SM, Alam N, Millogo O, et al. HIV/AIDS-related mortality in Africa and Asia: evidence from INDEPTH health and demographic surveillance system sites. Glob Health Action. 2014;7:25370. doi: 10.3402/gha.v7.25370. [* This study presents standardised HIV/AIDS-related mortality rates from health and demographic surveillance sites across Africa and Asia.] [DOI] [PMC free article] [PubMed] [Google Scholar]
- 16.Maher D, Biraro S, Hosegood V, Isingo R, Lutalo T, Mushati P, et al. Translating global health research aims into action: the example of the ALPHA network. Trop Med Int Health. 2010;15(3):321–8. doi: 10.1111/j.1365-3156.2009.02456.x. [DOI] [PubMed] [Google Scholar]
- 17.Reniers G, Slaymaker E, Nakiyingi-Miiro J, Nyamukapa C, Crampin AC, Herbst K, et al. Mortality trends in the era of antiretroviral therapy: evidence from the Network for Analysing Longitudinal Population based HIV/AIDS data on Africa (ALPHA) AIDS. 2014;28(Suppl 4):S533–42. doi: 10.1097/QAD.0000000000000496. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 18.Barnighausen T, Tanser F, Gqwede Z, Mbizana C, Herbst K, Newell ML. High HIV incidence in a community with high HIV prevalence in rural South Africa: findings from a prospective population-based study. AIDS. 2008;22(1):139–44. doi: 10.1097/QAD.0b013e3282f2ef43. [DOI] [PubMed] [Google Scholar]
- 19.Tanser F, Barnighausen T, Cooke GS, Newell ML. Localized spatial clustering of HIV infections in a widely disseminated rural South African epidemic. Int J Epidemiol. 2009;38(4):1008–16. doi: 10.1093/ije/dyp148. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 20.Bor J, Tanser F, Newell ML, Barnighausen T. In a study of a population cohort in South Africa, HIV patients on antiretrovirals had nearly full recovery of employment. Health Aff (Millwood) 2012;31(7):1459–69. doi: 10.1377/hlthaff.2012.0407. Epub 2012/07/11. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 21.Raifman J, Chetty T, Tanser F, Mutevedzi T, Matthews P, Herbst K, et al. Preventing unintended pregnancy and HIV transmission: effects of the HIV treatment cascade on contraceptive use and choice in rural KwaZulu-Natal. J Acquir Immune Defic Syndr. 2014;67(Suppl 4):S218–27. doi: 10.1097/QAI.0000000000000373. Epub 2014/12/02. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 22.Hontelez J, Tanser F, de Vlas S, Naidu K, Baltussen R, Pillay D, et al. Effects of antiretroviral treatment on health care utilization in rural South Africa. Conference on Retroviruses and Opportunistic Infections (CROI), Feburary 23-26; Seattle: 2015. [Google Scholar]
- 23.UNAIDS. The GAP Report. Geneva: UNAIDS; 2014. [Google Scholar]
- 24.Cooke GS, Tanser FC, Bärnighausen TW, Newell ML. Population uptake of antiretroviral treatment through primary care in rural South Africa. BMC public health. 2010;10:585. doi: 10.1186/1471-2458-10-585. Epub 2010/10/06. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 25.Siika AM, Rotich JK, Simiyu CJ, Kigotho EM, Smith FE, Sidle JE, et al. An electronic medical record system for ambulatory care of HIV-infected patients in Kenya. International journal of medical informatics. 2005;74(5):345–55. doi: 10.1016/j.ijmedinf.2005.03.002. [DOI] [PubMed] [Google Scholar]
- 26.Tierney WM, Rotich JK, Hannan TJ, Siika AM, Biondich PG, Mamlin BW, et al. The AMPATH medical record system: creating, implementing, and sustaining an electronic medical record system to support HIV/AIDS care in western Kenya. Studies in health technology and informatics. 2007;129(1):372. [PubMed] [Google Scholar]
- 27.Williams F, Boren SA. The role of the electronic medical record (EMR) in care delivery development in developing countries: a systematic review. Informatics in primary care. 2008;16(2):139–45. doi: 10.14236/jhi.v16i2.685. [DOI] [PubMed] [Google Scholar]
- 28.Braitstein P, Einterz RM, Sidle JE, Kimaiyo S, Tierney W. “Talkin'About a Revolution”: How Electronic Health Records Can Facilitate the Scale-Up of HIV Care and Treatment and Catalyze Primary Care in Resource-Constrained Settings. JAIDS Journal of Acquired Immune Deficiency Syndromes. 2009;52:S54–S7. doi: 10.1097/QAI.0b013e3181bbcb67. [DOI] [PubMed] [Google Scholar]
- 29.World Health Organization. Three interlinked patient monitoring systems for HIV care/ART, MCH/PMTCT (including malaria prevention during pregnancy), and TB/HIV: standardized minimum data set and illustrative tools. Geneva: World Health Organization; 2009. [Google Scholar]
- 30.Douglas GP, Gadabu OJ, Joukes S, Mumba S, McKay MV, Ben-Smith A, et al. Using touchscreen electronic medical record systems to support and monitor national scale-up of antiretroviral therapy in Malawi. PLoS medicine. 2010;7(8):e1000319. doi: 10.1371/journal.pmed.1000319. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 31.Osler M, Hilderbrand K, Hennessey C, Arendse J, Goemaere E, Ford N, et al. A three-tier framework for monitoring antiretroviral therapy in high HIV burden settings. Journal of the International AIDS Society. 2014;17(1) doi: 10.7448/IAS.17.1.18908. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 32.National Department of Health. TIER.Net Implementation progress. [cited 2015 5 June 2015];2015 Available from: https://vula.uct.ac.za/access/content/group/29260d96-184d-4d7f-9a55-f0418a4b21ba/RSA%20National%20Resources/TIER.Net%20Implementation%20tools/
- 33.Kaslow RA, Ostrow DG, Detels R, Phair JP, Polk BF, Rinaldo CR., Jr The Multicenter AIDS Cohort Study: rationale, organization, and selected characteristics of the participants. Am J Epidemiol. 1987;126(2):310–8. doi: 10.1093/aje/126.2.310. [DOI] [PubMed] [Google Scholar]
- 34.Lundgren JD, Phillips AN, Vella S, Katlama C, Ledergerber B, Johnson AM, et al. Regional differences in use of antiretroviral agents and primary prophylaxis in 3122 European HIV-infected patients. EuroSIDA Study Group. J Acquir Immune Defic Syndr Hum Retrovirol. 1997;16(3):153–60. doi: 10.1097/00042560-199711010-00003. [DOI] [PubMed] [Google Scholar]
- 35.The Australian HIV Observational Database. Time trends in antiretroviral treatment use in Australia, 1997-2000. Venereology. 2001;14(4):162–8. [Google Scholar]
- 36.Friis-Moller N, Weber R, Reiss P, Thiebaut R, Kirk O, d'Arminio Monforte A, et al. Cardiovascular disease risk factors in HIV patients--association with antiretroviral therapy. Results from the DAD study. AIDS. 2003;17(8):1179–93. doi: 10.1097/01.aids.0000060358.78202.c1. [DOI] [PubMed] [Google Scholar]
- 37.Egger M, Ekouevi DK, Williams C, Lyamuya RE, Mukumbi H, Braitstein P, et al. Cohort Profile: the international epidemiological databases to evaluate AIDS (IeDEA) in sub-Saharan Africa. Int J Epidemiol. 2012;41(5):1256–64. doi: 10.1093/ije/dyr080. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 38.Chi BH, Yiannoutsos CT, Westfall AO, Newman JE, Zhou J, Cesar C, et al. Universal definition of loss to follow-up in HIV treatment programs: a statistical analysis of 111 facilities in Africa, Asia, and Latin America. PLoS Med. 2011;8(10):e1001111. doi: 10.1371/journal.pmed.1001111. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 39.IeDea, Collaborations ARTC. Avila D, Althoff KN, Mugglin C, Wools-Kaloustian K, et al. Immunodeficiency at the start of combination antiretroviral therapy in low-, middle-, and high-income countries. J Acquir Immune Defic Syndr. 2014;65(1):e8–16. doi: 10.1097/QAI.0b013e3182a39979. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 40.Rockers PC, Rottingen JA, Shemilt I, Tugwell P, Bärnighausen T. Inclusion of quasi-experimental studies in systematic reviews of health systems research. Health Policy. 2015;119(4):511–21. doi: 10.1016/j.healthpol.2014.10.006. Epub 2015/03/18. [DOI] [PubMed] [Google Scholar]
- 41.Gunasekara FI, Richardson K, Carter K, Blakely T. Fixed effects analysis of repeated measures data. International journal of epidemiology. 2014;43(1):264–9. doi: 10.1093/ije/dyt221. Epub 2013/12/25. [DOI] [PubMed] [Google Scholar]
- 42.Hernan MA, Brumback B, Robins JM. Marginal structural models to estimate the causal effect of zidovudine on the survival of HIV-positive men. Epidemiology. 2000;11(5):561–70. doi: 10.1097/00001648-200009000-00012. [DOI] [PubMed] [Google Scholar]
- 43.Moscoe E, Bor J, Bärnighausen T. Regression discontinuity designs are underutilized in medicine, epidemiology, and public health: a review of current and best practice. Journal of clinical epidemiology. 2015;68(2):122–33. doi: 10.1016/j.jclinepi.2014.06.021. Epub 2015/01/13. [DOI] [PubMed] [Google Scholar]
- 44.Bor J, Moscoe E, Bärnighausen T. Three approaches to causal inference in regression discontinuity designs. Epidemiology. 2015;26(2):e28–30. doi: 10.1097/EDE.0000000000000256. discussion e. Epub 2015/02/03. [DOI] [PubMed] [Google Scholar]
- 45.Bor J, Moscoe E, Mutevedzi P, Newell ML, Bärnighausen T. Regression discontinuity designs in epidemiology: causal inference without randomized trials. Epidemiology. 2014;25(5):729–37. doi: 10.1097/EDE.0000000000000138. Epub 2014/07/26. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 46.Petersen M, Yiannoutsos CT, Justice A, Egger M. Observational research on NCDs in HIV-positive populations: conceptual and methodological considerations. J Acquir Immune Defic Syndr. 2014;67(Suppl 1):S8–16. doi: 10.1097/QAI.0000000000000253. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 47.Hontelez JA, de Vlas SJ, Baltussen R, Newell ML, Bakker R, Tanser F, et al. The impact of antiretroviral treatment on the age composition of the HIV epidemic in sub-Saharan Africa. AIDS. 2012;26(Suppl 1):S19–30. doi: 10.1097/QAD.0b013e3283558526. Epub 2012/09/26. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 48.Institute for Health Metrics and Evaluation (IHME) GBD profile: South Africa. Seattle: IHME; 2013. [Google Scholar]
- 49.Statistics South Africa (StatsSA) Mortality and causes of death in South Africa, 2013: findings from death notification. Pretoria: StatsSA; 2014. [Google Scholar]
- 50.Bärnighausen T, Welz T, Hosegood V, Batzing-Feigenbaum J, Tanser F, Herbst K, et al. Hiding in the shadows of the HIV epidemic: obesity and hypertension in a rural population with very high HIV prevalence in South Africa. Journal of human hypertension. 2008;22(3):236–9. doi: 10.1038/sj.jhh.1002308. Epub 2007/11/30. [DOI] [PubMed] [Google Scholar]
- 51.Uttayamakul S, Likanonsakul S, Sunthornkachit R, Kuntiranont K, Louisirirotchanakul S, Chaovavanich A, et al. Usage of dried blood spots for molecular diagnosis and monitoring HIV-1 infection. J Virol Methods. 2005;128(1-2):128–34. doi: 10.1016/j.jviromet.2005.04.010. Epub 2005/05/26. [DOI] [PubMed] [Google Scholar]
- 52.De Crignis E, Re MC, Cimatti L, Zecchi L, Gibellini D. HIV-1 and HCV detection in dried blood spots by SYBR Green multiplex real-time RT-PCR. J Virol Methods. 2010;165(1):51–6. doi: 10.1016/j.jviromet.2009.12.017. Epub 2010/01/05. [DOI] [PubMed] [Google Scholar]
- 53.Yourno J, Conroy J. A novel polymerase chain reaction method for detection of human immunodeficiency virus in dried blood spots on filter paper. J Clin Microbiol. 1992;30(11):2887–92. doi: 10.1128/jcm.30.11.2887-2892.1992. Epub 1992/11/01. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 54.Barin F, Plantier JC, Brand D, Brunet S, Moreau A, Liandier B, et al. Human immunodeficiency virus serotyping on dried serum spots as a screening tool for the surveillance of the AIDS epidemic. J Med Virol. 2006;78(Suppl 1):S13–8. doi: 10.1002/jmv.20600. Epub 2006/04/20. [DOI] [PubMed] [Google Scholar]
- 55.Tuaillon E, Mondain AM, Meroueh F, Ottomani L, Picot MC, Nagot N, et al. Dried blood spot for hepatitis C virus serology and molecular testing. Hepatology. 2010;51(3):752–8. doi: 10.1002/hep.23407. Epub 2010/01/01. [DOI] [PubMed] [Google Scholar]
- 56.Judd A, Parry J, Hickman M, McDonald T, Jordan L, Lewis K, et al. Evaluation of a modified commercial assay in detecting antibody to hepatitis C virus in oral fluids and dried blood spots. J Med Virol. 2003;71(1):49–55. doi: 10.1002/jmv.10463. Epub 2003/07/15. [DOI] [PubMed] [Google Scholar]
- 57.Parker SP, Khan HI, Cubitt WD. Detection of antibodies to hepatitis C virus in dried blood spot samples from mothers and their offspring in Lahore, Pakistan. J Clin Microbiol. 1999;37(6):2061–3. doi: 10.1128/jcm.37.6.2061-2063.1999. Epub 1999/05/15. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 58.Waterboer T, Dondog B, Michael KM, Michel A, Schmitt M, Vaccarella S, et al. Dried blood spot samples for seroepidemiology of infections with human papillomaviruses, Helicobacter pylori, Hepatitis C Virus, and JC Virus. Cancer Epidemiol Biomarkers Prev. 2012;21(2):287–93. doi: 10.1158/1055-9965.EPI-11-1001. Epub 2011/12/08. [DOI] [PubMed] [Google Scholar]
- 59.Jardi R, Rodriguez-Frias F, Buti M, Schaper M, Valdes A, Martinez M, et al. Usefulness of dried blood samples for quantification and molecular characterization of HBV-DNA. Hepatology. 2004;40(1):133–9. doi: 10.1002/hep.20275. Epub 2004/07/09. [DOI] [PubMed] [Google Scholar]
- 60.Villar LM, de Oliveira JC, Cruz HM, Yoshida CF, Lampe E, Lewis-Ximenez LL. Assessment of dried blood spot samples as a simple method for detection of hepatitis B virus markers. J Med Virol. 2011;83(9):1522–9. doi: 10.1002/jmv.22138. Epub 2011/07/09. [DOI] [PubMed] [Google Scholar]
- 61.Lehmann S, Delaby C, Vialaret J, Ducos J, Hirtz C. Current and future use of “dried blood spot” analyses in clinical chemistry. Clin Chem Lab Med. 2013;51(10):1897–909. doi: 10.1515/cclm-2013-0228. Epub 2013/06/07. [DOI] [PubMed] [Google Scholar]
- 62.Tappin DM, Greer K, Cameron S, Kennedy R, Brown AJ, Girdwood RW. Maternal antibody to hepatitis B core antigen detected in dried neonatal blood spot samples. Epidemiol Infect. 1998;121(2):387–90. doi: 10.1017/s0950268898001393. Epub 1998/11/24. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 63.de Almeida LM, Azevedo RS, Guimaraes AA, Coutinho Eda S, Struchiner CJ, Massad E. Detection of antibodies against hepatitis A virus in eluates of blood spotted on filter-paper: a pilot study in Rio de Janeiro, Brazil. Trans R Soc Trop Med Hyg. 1999;93(4):401–4. doi: 10.1016/s0035-9203(99)90133-5. Epub 2000/02/16. [DOI] [PubMed] [Google Scholar]
- 64.Gil A, Gonzalez A, Dal-Re R, Dominguez V, Astasio P, Aguilar L. Detection of antibodies against hepatitis A in blood spots dried on filter paper. Is this a reliable method for epidemiological studies? Epidemiol Infect. 1997;118(2):189–91. doi: 10.1017/s0950268896007297. Epub 1997/04/01. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 65.Helfand RF, Keyserling HL, Williams I, Murray A, Mei J, Moscatiello C, et al. Comparative detection of measles and rubella IgM and IgG derived from filter paper blood and serum samples. J Med Virol. 2001;65(4):751–7. doi: 10.1002/jmv.2100. Epub 2001/12/18. [DOI] [PubMed] [Google Scholar]
- 66.Hardelid P, Williams D, Dezateux C, Cubitt WD, Peckham CS, Tookey PA, et al. Agreement of rubella IgG antibody measured in serum and dried blood spots using two commercial enzyme-linked immunosorbent assays. J Med Virol. 2008;80(2):360–4. doi: 10.1002/jmv.21077. Epub 2007/12/22. [DOI] [PubMed] [Google Scholar]
- 67.Balmaseda A, Saborio S, Tellez Y, Mercado JC, Perez L, Hammond SN, et al. Evaluation of immunological markers in serum, filter-paper blood spots, and saliva for dengue diagnosis and epidemiological studies. J Clin Virol. 2008;43(3):287–91. doi: 10.1016/j.jcv.2008.07.016. Epub 2008/09/12. [DOI] [PubMed] [Google Scholar]
- 68.Fachiroh J, Prasetyanti PR, Paramita DK, Prasetyawati AT, Anggrahini DW, Haryana SM, et al. Dried-blood sampling for epstein-barr virus immunoglobulin G (IgG) and IgA serology in nasopharyngeal carcinoma screening. J Clin Microbiol. 2008;46(4):1374–80. doi: 10.1128/JCM.01368-07. Epub 2008/02/08. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 69.Strenger V, Pfurtscheller K, Wendelin G, Aberle SW, Nacheva EP, Zohrer B, et al. Differentiating inherited human herpesvirus type 6 genome from primary human herpesvirus type 6 infection by means of dried blood spot from the newborn screening card. J Pediatr. 2011;159(5):859–61. doi: 10.1016/j.jpeds.2011.06.032. Epub 2011/08/16. [DOI] [PubMed] [Google Scholar]
- 70.Lewensohn-Fuchs I, Osterwall P, Forsgren M, Malm G. Detection of herpes simplex virus DNA in dried blood spots making a retrospective diagnosis possible. J Clin Virol. 2003;26(1):39–48. doi: 10.1016/s1386-6532(02)00019-7. Epub 2003/02/19. [DOI] [PubMed] [Google Scholar]
- 71.Gohring K, Dietz K, Hartleif S, Jahn G, Hamprecht K. Influence of different extraction methods and PCR techniques on the sensitivity of HCMV-DNA detection in dried blood spot (DBS) filter cards. J Clin Virol. 2010;48(4):278–81. doi: 10.1016/j.jcv.2010.04.011. Epub 2010/06/24. [DOI] [PubMed] [Google Scholar]
- 72.Scanga L, Chaing S, Powell C, Aylsworth AS, Harrell LJ, Henshaw NG, et al. Diagnosis of human congenital cytomegalovirus infection by amplification of viral DNA from dried blood spots on perinatal cards. J Mol Diagn. 2006;8(2):240–5. doi: 10.2353/jmoldx.2006.050075. Epub 2006/04/29. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 73.de la Fuente L, Toro C, Soriano V, Brugal MT, Vallejo F, Barrio G, et al. HTLV infection among young injection and non-injection heroin users in Spain: prevalence and correlates. J Clin Virol. 2006;35(3):244–9. doi: 10.1016/j.jcv.2005.06.006. Epub 2005/09/07. [DOI] [PubMed] [Google Scholar]
- 74.Stevens R, Pass K, Fuller S, Wiznia A, Noble L, Duva S, et al. Blood spot screening and confirmatory tests for syphilis antibody. J Clin Microbiol. 1992;30(9):2353–8. doi: 10.1128/jcm.30.9.2353-2358.1992. Epub 1992/09/01. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 75.Backhouse JL. Dried blood spot technique for detecting Treponema infection. Trans R Soc Trop Med Hyg. 1998;92(4):469. doi: 10.1016/s0035-9203(98)91098-7. Epub 1998/12/16. [DOI] [PubMed] [Google Scholar]
- 76.Hong HA, Ke NT, Nhon TN, Thinh ND, van der Gun JW, Hendriks JT, et al. Validation of the combined toxin-binding inhibition test for determination of neutralizing antibodies against tetanus and diphtheria toxins in a vaccine field study in Viet Nam. Bull World Health Organ. 1996;74(3):275–82. Epub 1996/01/01. [PMC free article] [PubMed] [Google Scholar]
- 77.Takkouche B, Iglesias J, Alonso-Fernandez JR, Fernandez-Gonzalez C, Gestal-Otero JJ. Detection of Brucella antibodies in eluted dried blood: a validation study. Immunol Lett. 1995;45(1-2):107–8. doi: 10.1016/0165-2478(94)00247-o. Epub 1995/02/01. [DOI] [PubMed] [Google Scholar]
- 78.Fenollar F, Raoult D. Diagnosis of rickettsial diseases using samples dried on blotting paper. Clin Diagn Lab Immunol. 1999;6(4):483–8. doi: 10.1128/cdli.6.4.483-488.1999. Epub 1999/07/03. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 79.Thanasekaraan V, Wiseman MS, Rayner RJ, Hiller EJ, Shale DJ. Pseudomonas aeruginosa antibodies in blood spots from patients with cystic fibrosis. Arch Dis Child. 1989;64(11):1599–603. doi: 10.1136/adc.64.11.1599. Epub 1989/11/01. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 80.Corran PH, Cook J, Lynch C, Leendertse H, Manjurano A, Griffin J, et al. Dried blood spots as a source of anti-malarial antibodies for epidemiological studies. Malar J. 2008;7:195. doi: 10.1186/1475-2875-7-195. Epub 2008/10/02. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 81.Mason PR, Fiori PL, Cappuccinelli P, Rappelli P, Gregson S. Seroepidemiology of Trichomonas vaginalis in rural women in Zimbabwe and patterns of association with HIV infection. Epidemiol Infect. 2005;133(2):315–23. doi: 10.1017/s0950268804003127. Epub 2005/04/09. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 82.Zicker F, Smith PG, Luquetti AO, Oliveira OS. Mass screening for Trypanosoma cruzi infections using the immunofluorescence, ELISA and haemagglutination tests on serum samples and on blood eluates from filter-paper. Bull World Health Organ. 1990;68(4):465–71. Epub 1990/01/01. [PMC free article] [PubMed] [Google Scholar]
- 83.Peralta RH, Macedo HW, Vaz AJ, Machado LR, Peralta JM. Detection of anti-cysticercus antibodies by ELISA using whole blood collected on filter paper. Trans R Soc Trop Med Hyg. 2001;95(1):35–6. doi: 10.1016/s0035-9203(01)90324-4. Epub 2001/03/31. [DOI] [PubMed] [Google Scholar]
- 84.Sorensen T, Spenter J, Jaliashvili I, Christiansen M, Norgaard-Pedersen B, Petersen E. Automated time-resolved immunofluorometric assay for Toxoplasma gondii-specific IgM and IgA antibodies: study of more than 130,000 filter-paper blood-spot samples from newborns. Clin Chem. 2002;48(11):1981–6. Epub 2002/10/31. [PubMed] [Google Scholar]
- 85.Wang XL, Dudman NP, Blades BL, Wilcken DE. Changes in the immunoreactivity of Apo A-I during storage. Clin Chim Acta. 1989;179(3):285–93. doi: 10.1016/0009-8981(89)90091-0. Epub 1989/02/22. [DOI] [PubMed] [Google Scholar]
- 86.Quraishi R, Lakshmy R, Prabhakaran D, Mukhopadhyay AK, Jailkhani B. Use of filter paper stored dried blood for measurement of triglycerides. Lipids Health Dis. 2006;5:20. doi: 10.1186/1476-511X-5-20. Epub 2006/07/15. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 87.Brindle E, Fujita M, Shofer J, O'Connor KA. Serum, plasma, and dried blood spot high-sensitivity C-reactive protein enzyme immunoassay for population research. J Immunol Methods. 2010;362(1-2):112–20. doi: 10.1016/j.jim.2010.09.014. Epub 2010/09/21. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 88.Hu P, Herningtyas EH, Kale V, Crimmins EM, Risbud AR, McCreath H, et al. External quality control for dried blood spot-based C-reactive protein assay: experience from the indonesia family life survey and the longitudinal aging study in India. Biodemography Soc Biol. 2015;61(1):111–20. doi: 10.1080/19485565.2014.1001886. Epub 2015/04/17. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 89.Crimmins E, Kim JK, McCreath H, Faul J, Weir D, Seeman T. Validation of blood-based assays using dried blood spots for use in large population studies. Biodemography Soc Biol. 2014;60(1):38–48. doi: 10.1080/19485565.2014.901885. Epub 2014/05/03. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 90.D'Avolio A, Simiele M, Siccardi M, Baietto L, Sciandra M, Bonora S, et al. HPLC-MS method for the quantification of nine anti-HIV drugs from dry plasma spot on glass filter and their long term stability in different conditions. J Pharm Biomed Anal. 2010;52(5):774–80. doi: 10.1016/j.jpba.2010.02.026. Epub 2010/03/20. [DOI] [PubMed] [Google Scholar]
- 91.Koal T, Burhenne H, Romling R, Svoboda M, Resch K, Kaever V. Quantification of antiretroviral drugs in dried blood spot samples by means of liquid chromatography/tandem mass spectrometry. Rapid Commun Mass Spectrom. 2005;19(21):2995–3001. doi: 10.1002/rcm.2158. Epub 2005/09/30. [DOI] [PubMed] [Google Scholar]
- 92.Blessborn D, Romsing S, Bergqvist Y, Lindegardh N. Assay for screening for six antimalarial drugs and one metabolite using dried blood spot sampling, sequential extraction and ion-trap detection. Bioanalysis. 2010;2(11):1839–47. doi: 10.4155/bio.10.147. Epub 2010/11/19. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 93.Lindkvist J, Malm M, Bergqvist Y. Straightforward and rapid determination of sulfadoxine and sulfamethoxazole in capillary blood on sampling paper with liquid chromatography and UV detection. Trans R Soc Trop Med Hyg. 2009;103(4):371–6. doi: 10.1016/j.trstmh.2008.11.031. Epub 2009/02/03. [DOI] [PubMed] [Google Scholar]
- 94.Henderson LO, Powell MK, Hannon WH, Miller BB, Martin ML, Hanzlick RL, et al. Radioimmunoassay screening of dried blood spot materials for benzoylecgonine. J Anal Toxicol. 1993;17(1):42–7. doi: 10.1093/jat/17.1.42. Epub 1993/01/01. [DOI] [PubMed] [Google Scholar]
- 95.Li PK, Lee JT, Conboy KA, Ellis EF. Fluorescence polarization immunoassay for theophylline modified for use with dried blood spots on filter paper. Clin Chem. 1986;32(3):552–5. Epub 1986/03/01. [PubMed] [Google Scholar]
- 96.Hoffman DL. Purification and large-scale preparation of antithrombin III. Am J Med. 1989;87(3B):23S–6S. doi: 10.1016/0002-9343(89)80527-3. Epub 1989/09/11. [DOI] [PubMed] [Google Scholar]
- 97.Lakshmy R, Gupta R. Measurement of glycated hemoglobin A1c from dried blood by turbidimetric immunoassay. J Diabetes Sci Technol. 2009;3(5):1203–6. doi: 10.1177/193229680900300527. Epub 2010/02/11. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 98.Hu P, Edenfield M, Potter A, Kale V, Risbud A, Williams S, et al. Validation and modification of dried blood spot-based glycosylated hemoglobin assay for the longitudinal aging study in India. Am J Hum Biol. 2015;27(4):579–81. doi: 10.1002/ajhb.22664. Epub 2014/12/05. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 99.Dowlati B, Dunhardt PA, Smith MM, Shaheb S, Stuart CA. Quantification of insulin in dried blood spots. J Lab Clin Med. 1998;131(4):370–4. doi: 10.1016/s0022-2143(98)90188-3. Epub 1998/05/14. [DOI] [PubMed] [Google Scholar]
- 100.Burrin JM, Price CP. Performance of three enzymic methods for filter paper glucose determination. Ann Clin Biochem. 1984;21(Pt 5):411–6. doi: 10.1177/000456328402100513. Epub 1984/09/01. [DOI] [PubMed] [Google Scholar]
- 101.Zimmermann MB, Moretti D, Chaouki N, Torresani T. Development of a dried whole-blood spot thyroglobulin assay and its evaluation as an indicator of thyroid status in goitrous children receiving iodized salt. Am J Clin Nutr. 2003;77(6):1453–8. doi: 10.1093/ajcn/77.6.1453. Epub 2003/06/07. [DOI] [PubMed] [Google Scholar]
- 102.Dussault JH, Morissette J, Letarte J, Guyda H, Laberge C. Thyroxine-binding globulin capacity and concentration evaluated from blood spots on filter-paper in a screening program for neonatal hypothyroidism. Clin Chem. 1980;26(3):463–5. Epub 1980/03/01. [PubMed] [Google Scholar]
- 103.Hofman LF, Foley TP, Henry JJ, Naylor EW. The use of filter paper-dried blood spots for thyroid-antibody screening in adults. J Lab Clin Med. 2004;144(6):307–12. doi: 10.1016/j.lab.2004.09.009. Epub 2004/12/23. [DOI] [PubMed] [Google Scholar]
- 104.Chace DH, Singleton S, Diperna J, Aiello M, Foley T. Rapid metabolic and newborn screening of thyroxine (T4) from dried blood spots by MS/MS. Clin Chim Acta. 2009;403(1-2):178–83. doi: 10.1016/j.cca.2009.02.012. Epub 2009/03/04. [DOI] [PubMed] [Google Scholar]
- 105.Pacchiarotti A, Bartalena L, Falcone M, Buratti L, Grasso L, Martino E, et al. Free thyroxine and free triiodothyronine measurement in dried blood spots on filter paper by column adsorption chromatography followed by radioimmunoassay. Horm Metab Res. 1988;20(5):293–7. doi: 10.1055/s-2007-1010818. Epub 1988/05/01. [DOI] [PubMed] [Google Scholar]
- 106.Worthman CM, Stallings JF. Measurement of gonadotropins in dried blood spots. Clin Chem. 1994;40(3):448–53. Epub 1994/03/01. [PubMed] [Google Scholar]
- 107.Mitchell ML, Hermos RJ, Moses AC. Radioimmunoassay of somatomedin-C in filter paper discs containing dried blood. Clin Chem. 1987;33(4):536–8. Epub 1987/04/01. [PubMed] [Google Scholar]
- 108.Diamandi A, Khosravi MJ, Mistry J, Martinez V, Guevara-Aguirre J. Filter paper blood spot assay of human insulin-like growth factor I (IGF-I) and IGF-binding protein-3 and preliminary application in the evaluation of growth hormone status. J Clin Endocrinol Metab. 1998;83(7):2296–301. doi: 10.1210/jcem.83.7.4923. Epub 1998/07/14. [DOI] [PubMed] [Google Scholar]
- 109.Xu YY, Pettersson K, Blomberg K, Hemmila I, Mikola H, Lovgren T. Simultaneous quadruple-label fluorometric immunoassay of thyroid-stimulating hormone, 17 alpha-hydroxyprogesterone, immunoreactive trypsin, and creatine kinase MM isoenzyme in dried blood spots. Clin Chem. 1992;38(10):2038–43. Epub 1992/10/01. [PubMed] [Google Scholar]
- 110.Costa X, Jardi R, Rodriguez F, Miravitlles M, Cotrina M, Gonzalez C, et al. Simple method for alpha1-antitrypsin deficiency screening by use of dried blood spot specimens. Eur Respir J. 2000;15(6):1111–5. doi: 10.1034/j.1399-3003.2000.01521.x. Epub 2000/07/08. [DOI] [PubMed] [Google Scholar]
- 111.Macri JN, Anderson RW, Krantz DA, Larsen JW, Buchanan PD. Prenatal maternal dried blood screening with alpha-fetoprotein and free beta-human chorionic gonadotropin for open neural tube defect and Down syndrome. Am J Obstet Gynecol. 1996;174(2):566–72. doi: 10.1016/s0002-9378(96)70429-5. Epub 1996/02/01. [DOI] [PubMed] [Google Scholar]
- 112.Yamaguchi A, Fukushi M, Arai O, Mizushima Y, Sato Y, Shimizu Y, et al. A simple method for quantification of biotinidase activity in dried blood spot and its application to screening of biotinidase deficiency. Tohoku J Exp Med. 1987;152(4):339–46. doi: 10.1620/tjem.152.339. Epub 1987/08/01. [DOI] [PubMed] [Google Scholar]
- 113.deWilde A, Sadilkova K, Sadilek M, Vasta V, Hahn SH. Tryptic peptide analysis of ceruloplasmin in dried blood spots using liquid chromatography-tandem mass spectrometry: application to newborn screening. Clin Chem. 2008;54(12):1961–8. doi: 10.1373/clinchem.2008.111989. Epub 2008/10/11. [DOI] [PubMed] [Google Scholar]
- 114.Cowans NJ, Stamatopoulou A, Liitti P, Suonpaa M, Spencer K. The stability of free-beta human chorionic gonadotrophin and pregnancy-associated plasma protein-A in first trimester dried blood spots. Prenat Diagn. 2011;31(3):293–8. doi: 10.1002/pd.2709. Epub 2011/02/05. [DOI] [PubMed] [Google Scholar]
- 115.Daniel YA, Turner C, Haynes RM, Hunt BJ, Dalton RN. Quantification of hemoglobin A2 by tandem mass spectrometry. Clin Chem. 2007;53(8):1448–54. doi: 10.1373/clinchem.2007.088682. Epub 2007/06/09. [DOI] [PubMed] [Google Scholar]
- 116.Jacomelli G, Micheli V, Peruzzi L, Notarantonio L, Cerboni B, Sestini S, et al. Simple non-radiochemical HPLC-linked method for screening for purine metabolism disorders using dried blood spot. Clin Chim Acta. 2002;324(1–2):135–9. doi: 10.1016/s0009-8981(02)00243-7. Epub 2002/09/03. [DOI] [PubMed] [Google Scholar]
- 117.Wang D, Wood T, Sadilek M, Scott CR, Turecek F, Gelb MH. Tandem mass spectrometry for the direct assay of enzymes in dried blood spots: application to newborn screening for mucopolysaccharidosis II (Hunter disease) Clin Chem. 2007;53(1):137–40. doi: 10.1373/clinchem.2006.077263. Epub 2006/11/04. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 118.Chamoles NA, Niizawa G, Blanco M, Gaggioli D, Casentini C. Glycogen storage disease type II: enzymatic screening in dried blood spots on filter paper. Clin Chim Acta. 2004;347(1–2):97–102. doi: 10.1016/j.cccn.2004.04.009. Epub 2004/08/18. [DOI] [PubMed] [Google Scholar]
- 119.Chamoles NA, Blanco MB, Gaggioli D, Casentini C. Hurler-like phenotype: enzymatic diagnosis in dried blood spots on filter paper. Clin Chem. 2001;47(12):2098–102. Epub 2001/11/24. [PubMed] [Google Scholar]
- 120.Chamoles NA, Blanco M, Gaggioli D. Diagnosis of alpha-L-iduronidase deficiency in dried blood spots on filter paper: the possibility of newborn diagnosis. Clin Chem. 2001;47(4):780–1. Epub 2001/03/29. [PubMed] [Google Scholar]
- 121.ten Brink HJ, van den Heuvel CM, Christensen E, Largilliere C, Jakobs C. Diagnosis of peroxisomal disorders by analysis of phytanic and pristanic acids in stored blood spots collected at neonatal screening. Clin Chem. 1993;39(9):1904–6. Epub 1993/09/01. [PubMed] [Google Scholar]
- 122.Vladutiu GD, Glueck CJ, Schultz MT, McNeely S, Guthrie R. beta-Lipoprotein quantitation in cord blood spotted on filter paper: a screening test. Clin Chem. 1980;26(9):1285–90. Epub 1980/08/01. [PubMed] [Google Scholar]
- 123.Laberge C, Grenier A, Valet JP, Morissette J. Fumarylacetoacetase measurement as a mass-screening procedure for hereditary tyrosinemia type I. Am J Hum Genet. 1990;47(2):325–8. Epub 1990/08/01. [PMC free article] [PubMed] [Google Scholar]
- 124.Chamoles NA, Blanco MB, Iorcansky S, Gaggioli D, Specola N, Casentini C. Retrospective diagnosis of GM1 gangliosidosis by use of a newborn-screening card. Clin Chem. 2001;47(11):2068. Epub 2001/10/24. [PubMed] [Google Scholar]
- 125.Kirby LT, Applegarth DA, Davidson AG, Wong LT, Hardwick DF. Use of a dried blood spot in immunoreactive-trypsin assay for detection of cystic fibrosis in infants. Clin Chem. 1981;27(5):678–8. Epub 1981/05/01. [PubMed] [Google Scholar]
- 126.Fujimoto A, Okano Y, Miyagi T, Isshiki G, Oura T. Quantitative Beutler test for newborn mass screening of galactosemia using a fluorometric microplate reader. Clin Chem. 2000;46(6 Pt 1):806–10. Epub 2000/06/06. [PubMed] [Google Scholar]
- 127.Guthrie R, Susi A. A SIMPLE PHENYLALANINE METHOD FOR DETECTING PHENYLKETONURIA IN LARGE POPULATIONS OF NEWBORN INFANTS. Pediatrics. 1963;32:338–43. Epub 1963/09/01. [PubMed] [Google Scholar]
- 128.Accinni R, Campolo J, Parolini M, De Maria R, Caruso R, Maiorana A, et al. Newborn screening of homocystinuria: quantitative analysis of total homocyst(e)ine on dried blood spot by liquid chromatography with fluorimetric detection. J Chromatogr B Analyt Technol Biomed Life Sci. 2003;785(2):219–26. doi: 10.1016/s1570-0232(02)00852-8. Epub 2003/01/30. [DOI] [PubMed] [Google Scholar]
- 129.Lacey JM, Minutti CZ, Magera MJ, Tauscher AL, Casetta B, McCann M, et al. Improved specificity of newborn screening for congenital adrenal hyperplasia by second-tier steroid profiling using tandem mass spectrometry. Clin Chem. 2004;50(3):621–5. doi: 10.1373/clinchem.2003.027193. Epub 2003/12/06. [DOI] [PubMed] [Google Scholar]
- 130.Schulze A, Schmidt C, Kohlmuller D, Hoffmann GF, Mayatepek E. Accurate measurement of free carnitine in dried blood spots by isotope-dilution electrospray tandem mass spectrometry without butylation. Clin Chim Acta. 2003;335(1–2):137–45. doi: 10.1016/s0009-8981(03)00292-4. Epub 2003/08/21. [DOI] [PubMed] [Google Scholar]
- 131.Carducci C, Santagata S, Leuzzi V, Carducci C, Artiola C, Giovanniello T, et al. Quantitative determination of guanidinoacetate and creatine in dried blood spot by flow injection analysis-electrospray tandem mass spectrometry. Clin Chim Acta. 2006;364(1-2):180–7. doi: 10.1016/j.cca.2005.06.016. Epub 2005/10/04. [DOI] [PubMed] [Google Scholar]
- 132.Conroy JM, Trivedi G, Sovd T, Caggana M. The allele frequency of mutations in four genes that confer enhanced susceptibility to venous thromboembolism in an unselected group of New York State newborns. Thromb Res. 2000;99(4):317–24. doi: 10.1016/s0049-3848(00)00254-1. Epub 2000/08/30. [DOI] [PubMed] [Google Scholar]
- 133.Bobillo Lobato J, Sanchez Peral BA, Duran Parejo P, Jimenez Jimenez LM. Detection of c. -32T>G (IVS1-13T>G) mutation of Pompe disease by real-time PCR in dried blood spot specimen. Clin Chim Acta. 2013;418:107–8. doi: 10.1016/j.cca.2012.12.015. Epub 2013/01/12. [DOI] [PubMed] [Google Scholar]
- 134.Chien YH, Lee NC, Chiang SC, Desnick RJ, Hwu WL. Fabry disease: incidence of the common later-onset alpha-galactosidase A IVS4+919G-->A mutation in Taiwanese newborns--superiority of DNA-based to enzyme-based newborn screening for common mutations. Mol Med. 2012;18:780–4. doi: 10.2119/molmed.2012.00002. Epub 2012/03/23. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 135.Abdallah MW, Larsen N, Grove J, Bonefeld-Jorgensen EC, Norgaard-Pedersen B, Hougaard DM, et al. Neonatal chemokine levels and risk of autism spectrum disorders: findings from a Danish historic birth cohort follow-up study. Cytokine. 2013;61(2):370–6. doi: 10.1016/j.cyto.2012.11.015. Epub 2012/12/27. [DOI] [PubMed] [Google Scholar]
- 136.Cordovado SK, Hendrix M, Greene CN, Mochal S, Earley MC, Farrell PM, et al. CFTR mutation analysis and haplotype associations in CF patients. Mol Genet Metab. 2012;105(2):249–54. doi: 10.1016/j.ymgme.2011.10.013. Epub 2011/12/06. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 137.Harahap NI, Harahap IS, Kaszynski RH, Nurputra DK, Hartomo TB, Pham HT, et al. Spinal muscular atrophy patient detection and carrier screening using dried blood spots on filter paper. Genet Test Mol Biomarkers. 2012;16(2):123–9. doi: 10.1089/gtmb.2011.0109. Epub 2011/09/29. [DOI] [PubMed] [Google Scholar]
- 138.Coffee B, Keith K, Albizua I, Malone T, Mowrey J, Sherman SL, et al. Incidence of fragile X syndrome by newborn screening for methylated FMR1 DNA. Am J Hum Genet. 2009;85(4):503–14. doi: 10.1016/j.ajhg.2009.09.007. Epub 2009/10/07. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 139.O'Broin SD, Gunter EW. Screening of folate status with use of dried blood spots on filter paper. Am J Clin Nutr. 1999;70(3):359–67. doi: 10.1093/ajcn/70.3.359. Epub 1999/09/09. [DOI] [PubMed] [Google Scholar]
- 140.McDade TW, Shell-Duncan B. Whole blood collected on filter paper provides a minimally invasive method for assessing human transferrin receptor level. J Nutr. 2002;132(12):3760–3. doi: 10.1093/jn/132.12.3760. Epub 2002/12/07. [DOI] [PubMed] [Google Scholar]
- 141.Fallah E, Peighambardoust SH. Validation of the Use of Dried Blood Spot (DBS) Method to Assess Vitamin A Status. Health Promot Perspect. 2012;2(2):180–9. doi: 10.5681/hpp.2012.021. Epub 2012/01/01. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 142.Craft NE, Bulux J, Valdez C, Li Y, Solomons NW. Retinol concentrations in capillary dried blood spots from healthy volunteers: method validation. Am J Clin Nutr. 2000;72(2):450–4. doi: 10.1093/ajcn/72.2.450. Epub 2000/08/02. [DOI] [PubMed] [Google Scholar]
- 143.Fisher RS, Chan DW, Bare M, Lesser RP. Capillary prolactin measurement for diagnosis of seizures. Ann Neurol. 1991;29(2):187–90. doi: 10.1002/ana.410290212. Epub 1991/02/01. [DOI] [PubMed] [Google Scholar]
- 144.Skogstrand K, Ekelund CK, Thorsen P, Vogel I, Jacobsson B, Norgaard-Pedersen B, et al. Effects of blood sample handling procedures on measurable inflammatory markers in plasma, serum and dried blood spot samples. J Immunol Methods. 2008;336(1):78–84. doi: 10.1016/j.jim.2008.04.006. Epub 2008/05/23. [DOI] [PubMed] [Google Scholar]
- 145.Tanner S, McDade TW. Enzyme immunoassay for total immunoglobulin E in dried blood spots. Am J Hum Biol. 2007;19(3):440–2. doi: 10.1002/ajhb.20635. Epub 2007/04/11. [DOI] [PubMed] [Google Scholar]
- 146.Zytkovicz TH, Fitzgerald EF, Marsden D, Larson CA, Shih VE, Johnson DM, et al. Tandem mass spectrometric analysis for amino, organic, and fatty acid disorders in newborn dried blood spots: a two-year summary from the New England Newborn Screening Program. Clin Chem. 2001;47(11):1945–55. Epub 2001/10/24. [PubMed] [Google Scholar]
- 147.Burse VW, DeGuzman MR, Korver MP, Najam AR, Williams CC, Hannon WH, et al. Preliminary investigation of the use of dried-blood spots for the assessment of in utero exposure to environmental pollutants. Biochem Mol Med. 1997;61(2):236–9. doi: 10.1006/bmme.1997.2603. Epub 1997/08/01. [DOI] [PubMed] [Google Scholar]
- 148.Chaiyachati K, Hirschhorn LR, Tanser F, Newell ML, Bärnighausen T. Validating five questions of antiretroviral nonadherence in a public-sector treatment program in rural South Africa. AIDS patient care and STDs. 2011;25(3):163–70. doi: 10.1089/apc.2010.0257. Epub 2011/01/29. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 149.van der Straten A, Stadler J, Montgomery E, Hartmann M, Magazi B, Mathebula F, et al. Women’s Experiences with Oral and Vaginal Pre-Exposure Prophylaxis: The VOICE-C Qualitative Study in Johannesburg, South Africa. PLoS ONE. 2014;9(2):e89118. doi: 10.1371/journal.pone.0089118. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 150.Phillips AE, Gomez GB, Boily MC, Garnett GP. A systematic review and meta-analysis of quantitative interviewing tools to investigate self-reported HIV and STI associated behaviours in low- and middle-income countries. Int J Epidemiol. 2010;39(6):1541–55. doi: 10.1093/ije/dyq114. Epub 2010/07/16. [DOI] [PubMed] [Google Scholar]
- 151.Langhaug LF, Sherr L, Cowan FM. How to improve the validity of sexual behaviour reporting: systematic review of questionnaire delivery modes in developing countries. Trop Med Int Health. 2010;15(3):362–81. doi: 10.1111/j.1365-3156.2009.02464.x. Epub 2010/04/23. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 152.Bangsberg DR, Bronstone A, Chesney MA, Hecht FM. Computer-assisted self-interviewing (CASI) to improve provider assessment of adherence in routine clinical practice. J Acquir Immune Defic Syndr. 2002;31(Suppl. 3):S107–11. doi: 10.1097/00126334-200212153-00004. [DOI] [PubMed] [Google Scholar]
- 153.Tolley EE, Harrison PF, Goetghebeur E, Morrow K, Pool R, Taylor D, et al. Adherence and its measurement in phase 2/3 microbicide trials. AIDS Behav. 2010;14(5):1124–36. doi: 10.1007/s10461-009-9635-x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 154.Diez Roux AV. The study of group-level factors in epidemiology: rethinking variables, study designs, and analytical approaches. Epidemiologic reviews. 2004;26:104–11. doi: 10.1093/epirev/mxh006. [DOI] [PubMed] [Google Scholar]
- 155.Susser M. The logic in ecological: II. The logic of design. American journal of public health. 1994;84(5):830–5. doi: 10.2105/ajph.84.5.830. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 156.Schwartz S. The fallacy of the ecological fallacy: the potential misuse of a concept and the consequences. American journal of public health. 1994;84(5):819–24. doi: 10.2105/ajph.84.5.819. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 157.Cooke GS, Tanser FC, Barnighausen TW, Newell ML. Population uptake of antiretroviral treatment through primary care in rural South Africa. BMC public health. 2010;10:585. doi: 10.1186/1471-2458-10-585. Epub 2010/10/06. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 158.Elkies N, Fink G, Bärnighausen T. “Scrambling” geo-referenced data to protect privacy induces bias in distance estimation. Population and Environment. 2015 doi: 10.1007/s11111-014-0225-0. Publishe online 03 February 2015. [* This study showed for the first time (and proved mathematicallh) that “scrambling” of geo-location data, a common practice among researchers and survey agencies to protect privacy, leads to a systematic overestimation of the distance between two points.] [DOI] [Google Scholar]
- 159.McPherson M, Smith-Lovin L, Cook JM. Birds of a feather: Homophily in social networks. Annual review of sociology. 2001:415–44. [Google Scholar]
- 160.Berkman LF, Krishna A. Social network epidemiology. Social epidemiology. 2014:234–89. [Google Scholar]
- 161.Goodreau SM, Cassels S, Kasprzyk D, Montaño DE, Greek A, Morris M. Concurrent partnerships, acute infection and HIV epidemic dynamics among young adults in Zimbabwe. AIDS Behav. 2012;16(2):312–22. doi: 10.1007/s10461-010-9858-x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 162.Aral SO, Hughes JP, Stoner BP, Whittington W, Handsfield HH, Anderson RM, et al. Sexual mixing patterns in the spread of gonococcal and chlamydial infections. Am J Public Health. 1999;89(6):825–33. doi: 10.2105/ajph.89.6.825. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 163.Ward H. Prevention strategies for sexually transmitted infections: importance of sexual network structure and epidemic phase. Sex Transm Infect. 2007;83(suppl 1):i43–i9. doi: 10.1136/sti.2006.023598. [DOI] [PubMed] [Google Scholar]
- 164.Hontelez JA, Nagelkerke N, Bärnighausen T, Bakker R, Tanser F, Newell M-L, et al. The potential impact of RV144-like vaccines in rural South Africa: a study using the STDSIM microsimulation model. Vaccine. 2011;29(36):6100–6. doi: 10.1016/j.vaccine.2011.06.059. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 165.Salathé M, Jones JH. Dynamics and control of diseases in networks with community structure. PLoS Comput Biol. 2010;6(4):e1000736. doi: 10.1371/journal.pcbi.1000736. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 166.Tanser F, Bärnighausen T, Vandormael A, Dobra A. The HIV treatment cascade in migrants and mobile populations. Curr Opin HIV AIDS. 2015 doi: 10.1097/COH.0000000000000192. [DOI] [PubMed] [Google Scholar]
- 167.Lima V, Fernandes K, Rachlis B, Druyts E, Montaner J, Hogg R. Migration adversely affects antiretroviral adherence in a population-based cohort of HIV/AIDS patients. Social Science and Medicine. 2009;68:1044–9. doi: 10.1016/j.socscimed.2008.12.043. [DOI] [PubMed] [Google Scholar]
- 168.Bygrave H, Kranzer K, Hilderbrand K, Whittall J, Jouquet G, Goemaere E, et al. Trends in Loss to Follow-Up among Migrant Workers on Antiretroviral Therapy in a Community Cohort in Lesotho. PLoS ONE. 2010;5(10):e13198. doi: 10.1371/journal.pone.0013198. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 169.Abgrall S, Fugon L, Le´le´ N, Carde E, Bentata M, Patey O, et al. Visiting One’s Native Country: The Risks of Nonadherence in HIV-Infected Sub-Saharan Migrants—ANRS VIHVO Study. Journal of the International Association of Providers of AIDS Care. 2013;12(6):407–13. doi: 10.1177/2325957413488181. [DOI] [PubMed] [Google Scholar]
- 170.Mutevedzi PC, Lessells RJ, Newell M-L. Disengagement from care in a decentralised primary health care antiretroviral treatment programme: cohort study in rural South Africa. Tropical Medicine and International Health. 2013;18(8):934–41. doi: 10.1111/tmi.12135. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 171.Buskin SE, Kent JB, Dombrowski JC, Golden MR. Migration Distorts Surveillance Estimates of Engagement in Care: Results of Public Health Investigations of Persons Who Appear to be Out of HIV Care. Sexually Transmitted Diseases. 2014;41(1):35–40. doi: 10.1097/OLQ.0000000000000072. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 172.Tanser F, Hosegood V, Bärnighausen T, Herbst K, Nyirenda M, Muhwava W, et al. Cohort Profile: Africa Centre Demographic Information System (ACDIS) and population-based HIV survey. Int J Epidemiol. 2008;37(5):956–62. doi: 10.1093/ije/dym211. Epub 2007/11/14. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 173.Collinson MA, White MJ, Bocquier P, McGarvey ST, Afolabi SA, Clark SJ, et al. Migration and the epidemiological transition: insights from the Agincourt sub-district of northeast South Africa. Glob Health Action. 2014;7:23514. doi: 10.3402/gha.v7.23514. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 174.Kahn K, Collinson MA, Gomez-Olive FX, Mokoena O, Twine R, Mee P, et al. Profile: Agincourt health and socio-demographic surveillance system. Int J Epidemiol. 2012;41(4):988–1001. doi: 10.1093/ije/dys115. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 175.ITU. International Telecommunication Union Facts and Figures. International Telecommunication Union. 2015 [Google Scholar]
- 176.Catalani C, Philbrick W, Fraser H, Mechael P, Israelski DM. mHealth for HIV Treatment & Prevention: A Systematic Review of the Literature. The Open AIDS Journal. 2013;7:17–41. doi: 10.2174/1874613620130812003. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 177.Green E, Ritchie F, Webber D, Mytton J, Deave T, Montgomery A, et al. Enabling Data Linkage to Maximise the Value of Public Health Research Data. London, UK: The Wellcome Trust; 2015. [Google Scholar]
- 178.Kabudula CW, Clark BD, Gomez-Olive FX, Tollman S, Menken J, Reniers G. The promise of record linkage for assessing the uptake of health services in resource constrained settings: a pilot study from South Africa. BMC Med Res Methodol. 2014;14:71. doi: 10.1186/1471-2288-14-71. [* This pilot study investigated the feasibility of linking data from a health and demographic surveillance site in South Africa to clinical data from a local healthcare facility. The authors demonstrated that fully automated probabilistic record linkage using identifiers routinely collected in South African healthcare facilities is feasible, and achieves a high degree of accurate matching of data (using fingerprint matching as the gold standard comparator).] [DOI] [PMC free article] [PubMed] [Google Scholar]
- 179.Joubert J, Bradshaw D, Kabudula C, Rao C, Kahn K, Mee P, et al. Record-linkage comparison of verbal autopsy and routine civil registration death certification in rural north-east South Africa: 2006-09. Int J Epidemiol. 2014;43(6):1945–58. doi: 10.1093/ije/dyu156. [DOI] [PMC free article] [PubMed] [Google Scholar]