Table 8.
lncRNA – pcRNA correlations and interactions.
| Gm4425 | C330006A16Rik | Ccdc41os1 | RP23-442I7.1* | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
| |||||||||
| 12 | 2 | 10 | 3 | ||||||
| Chr | r | is | r | is | r | is | r | is | |
| Kif5a | 10 | −0.95 | 95.05 | 0.87 | 93.73 | 0.90 | 98.81 | −0.94 | 98.89 |
| Snap25 | 2 | −0.90 | 79.13 | 0.95 | 82.73 | 0.94 | 97.14 | −0.93 | 97.60 |
| L1cam | X | 0.93 | 60.77 | −0.87 | 72.71 | −0.95 | 79.01 | 0.93 | 79.12 |
| Ncam1 | 9 | 0.92 | 77.44 | −0.86 | 63.34 | −0.95 | 78.49 | 0.95 | 78.65 |
| Dpys13 | 18 | 0.94 | 59.98 | −0.91 | 75.32 | −0.96 | 64.70 | 0.96 | 95.66 |
| Srgap2 | 1 | 0.92 | 78.96 | −0.90 | 76.22 | −0.95 | 98.14 | 0.96 | 98.12 |
Correlations and predicted protein interaction scores between pcRNA and lncRNA genes involved in neurotransmission and plasticity in the brain (selected from Fig. 3, Cluster 3). Spearman correlations (r) and lncPro interaction scores (is; score range 1 - 100) are listed for each pcRNA-lncRNA pair.
*
alternative name: 1110015O18Rik (ENSMUSG00000098659). Bold type denotes pcRNA – lncRNA pairs illustrated in Cluster 3 with correlations of at least |0.95|. Raw data is in Table S12.