Skip to main content
Proceedings of the National Academy of Sciences of the United States of America logoLink to Proceedings of the National Academy of Sciences of the United States of America
. 2016 Oct 4;113(41):E5996–E5997. doi: 10.1073/pnas.1612904113

Reply to Adams et al.: Empirical versus process-based approaches to modeling temperature responses of leaf respiration

Mary A Heskel a,b, Owen K Atkin a,c,1, Odhran S O’Sullivan a,d, Peter Reich e,f, Mark G Tjoelker e, Lasantha K Weerasinghe a,g, Aurore Penillard a, John J G Egerton a, Danielle Creek a,d, Keith J Bloomfield a, Jen Xiang c, Felipe Sinca h, Zsofia R Stangl i, Alberto Martinez-de la Torre j, Kevin L Griffin k,l, Chris Huntingford j, Vaughan Hurry m, Patrick Meir a,n, Matthew H Turnbull o
PMCID: PMC5068258  PMID: 27702907

Using an empirical approach, we report that the slope of the short-term log-transformed leaf respiration (R)–temperature (T) curves declines with increasing leaf T in a manner that is uniform across biomes (1); the results have utility for modeling carbon fluxes in terrestrial biosphere models (TBMs). The use of an empirical approach reflects the fact that, despite advances in understanding of factors regulating R (24) and its T-response (5), basic information on key determinants of R remains lacking, hindering development of a process-based model with utility for TBMs. Some, including Adams et al. (6), view Arrhenius theory as providing a way forward and argue that it is both predictive and mechanistic. As noted (6), this approach provides equivalent predictive power as the log-polynomial function (1), a finding that we do not dispute, and that was recently noted in a separate paper comparing several approaches to fitting short-term T-function of R (7). We also agree that global convergence in the shape of RT curves is an indication that respiratory regulation is likely to be common across plants (6). Where we differ, however, is whether the applied Arrhenius approach (6) is mechanistic. Arrhenius theory is applicable to reactions catalyzed by single enzymes that are substrate-saturated. For respiratory metabolism in plants, neither assumption holds, because the respiratory system is made up of numerous, highly-regulated reactions that are rarely substrate-saturated (8). Thus, although activation energy (Ea) values of R, including temperature-dependent ones (9, 10), provide estimates of the temperature coefficient of the overall respiratory system, they can be viewed as outputs of a statistical fit, because they do not necessarily provide insights into the individual mechanisms underpinning variation in RT curves.

In the temperature-modified Arrhenius approach (9), changes in the slope of log-transformed RT curves are achieved via adding a factor (δ) to account for T-dependent changes in the activation energy (i.e., T-sensitivity) estimated at 0 °C (E0). Similarly, we (1) provide estimates of the T-sensitivity at 0 °C, and how the T-sensitivity of R declines with increasing leaf T (i.e., b- and c-parameters in the polynomial). Thus, in general terms, b and E0 describe the T-sensitivity at 0 °C, with c and δ accounting for deceleration in R as leaves warm. Congruence in the two approaches therefore reflects their underlying operational similarities, raising the possibility that TBMs can indeed use either approach (1, 9).

Looking forward, development of a process-based model to account for the complexity of taxa- and environment-driven variations in R (11) remains a high priority. Notable advances are clarifying individual and collective mechanistic controls of R through models and experiments (25). Ideally in the future, a truly mechanistic approach based on these advances will emerge that meets the TBM integration requirements of being parameter-sparse, scalable, and spatially robust; however, current knowledge remains insufficient. Because of this fact, we suggest that empirical-based second order polynomials (1, 6, 9) fitted to globally relevant RT curve datasets (1) are an appropriate way for current TBMs to model dynamic variations in short-term RT curves.

Footnotes

The authors declare no conflict of interest.

References

  • 1.Heskel MA, et al. Convergence in the temperature response of leaf respiration across biomes and plant functional types. Proc Natl Acad Sci USA. 2016;113(14):3832–3837. doi: 10.1073/pnas.1520282113. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 2.Tcherkez G, Boex-Fontvieille E, Mahé A, Hodges M. Respiratory carbon fluxes in leaves. Curr Opin Plant Biol. 2012;15(3):308–314. doi: 10.1016/j.pbi.2011.12.003. [DOI] [PubMed] [Google Scholar]
  • 3.Buckley TN, Adams MA. An analytical model of non-photorespiratory CO2release in the light and dark in leaves of C₃species based on stoichiometric flux balance. Plant Cell Environ. 2011;34(1):89–112. doi: 10.1111/j.1365-3040.2010.02228.x. [DOI] [PubMed] [Google Scholar]
  • 4.Sweetlove LJ, Williams TCR, Cheung CYM, Ratcliffe RG. Modelling metabolic CO2 evolution--a fresh perspective on respiration. Plant Cell Environ. 2013;36(9):1631–1640. doi: 10.1111/pce.12105. [DOI] [PubMed] [Google Scholar]
  • 5.Kruse J, Rennenberg H, Adams MA. Steps towards a mechanistic understanding of respiratory temperature responses. New Phytol. 2011;189(3):659–677. doi: 10.1111/j.1469-8137.2010.03576.x. [DOI] [PubMed] [Google Scholar]
  • 6.Adams MA, Rennenberg H, Kruse J. Different models provide equivalent predictive power for cross-biome response of leaf respiration to temperature. Proc Natl Acad Sci USA. 2016;113:E5993–E5995. doi: 10.1073/pnas.1608562113. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 7.Reich PB, et al. Boreal and temperate trees show strong acclimation of respiration to warming. Nature. 2016;531(7596):633–636. doi: 10.1038/nature17142. [DOI] [PubMed] [Google Scholar]
  • 8.Millar AH, Whelan J, Soole KL, Day DA. Organization and regulation of mitochondrial respiration in plants. Annu Rev Plant Biol. 2011;62(1):79–104. doi: 10.1146/annurev-arplant-042110-103857. [DOI] [PubMed] [Google Scholar]
  • 9.Kruse J, Adams MA. Three parameters comprehensively describe the temperature response of respiratory oxygen reduction. Plant Cell Environ. 2008;31(7):954–967. doi: 10.1111/j.1365-3040.2008.01809.x. [DOI] [PubMed] [Google Scholar]
  • 10.Noguchi K, Yamori W, Hikosaka K, Terashima I. Homeostasis of the temperature sensitivity of respiration over a range of growth temperatures indicated by a modified Arrhenius model. New Phytol. 2015;207(1):34–42. doi: 10.1111/nph.13339. [DOI] [PubMed] [Google Scholar]
  • 11.Atkin OK, et al. Global variability in leaf respiration in relation to climate, plant functional types and leaf traits. New Phytol. 2015;206(2):614–636. doi: 10.1111/nph.13253. [DOI] [PubMed] [Google Scholar]

Articles from Proceedings of the National Academy of Sciences of the United States of America are provided here courtesy of National Academy of Sciences

RESOURCES