Skip to main content
Proceedings of the National Academy of Sciences of the United States of America logoLink to Proceedings of the National Academy of Sciences of the United States of America
. 1991 Jan 1;88(1):234–238. doi: 10.1073/pnas.88.1.234

Molecular cloning and expression of cDNA encoding the enzyme that controls conversion of high-mannose to hybrid and complex N-glycans: UDP-N-acetylglucosamine: alpha-3-D-mannoside beta-1,2-N-acetylglucosaminyltransferase I.

M Sarkar 1, E Hull 1, Y Nishikawa 1, R J Simpson 1, R L Moritz 1, R Dunn 1, H Schachter 1
PMCID: PMC50784  PMID: 1824724

Abstract

UDP-GlcNAc:alpha-3-D-mannoside beta-1,2-N-acetylglucosaminyltransferase I (GnT I; EC 2.4.1.101) catalyzes an essential first step in the conversion of high-mannose N-glycans to hybrid and complex N-glycans. Cloning of the gene encoding this enzyme was carried out by mixed oligonucleotide-primed polymerase chain reaction amplification of rabbit liver single-stranded cDNA using sense and antisense 20- to 24-base-pair (bp) primers. A rabbit liver library in phage lambda gt10 yielded a 2.5-kilobase (kb) cDNA with a 447-amino acid coding sequence. None of the nine asparagine residues were in an Asn-Xaa-(Ser or Thr) sequence, indicating that the protein is not N-glycosylated. There is no sequence homology to other previously cloned glycosyltransferases, but GnT I appears to have a domain structure typical of these enzymes--i.e., a short amino-terminal domain, a transmembrane domain, a "neck" region, and a large carboxyl-terminal catalytic domain. RNA was transcribed off the 2.5-kb cDNA, and in vitro translation with rabbit reticulocyte lysate yielded a 52-kDa protein with GnT I activity.

Full text

PDF
234

Images in this article

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Appert H. E., Rutherford T. J., Tarr G. E., Wiest J. S., Thomford N. R., McCorquodale D. J. Isolation of a cDNA coding for human galactosyltransferase. Biochem Biophys Res Commun. 1986 Aug 29;139(1):163–168. doi: 10.1016/s0006-291x(86)80094-8. [DOI] [PubMed] [Google Scholar]
  2. Aviv H., Leder P. Purification of biologically active globin messenger RNA by chromatography on oligothymidylic acid-cellulose. Proc Natl Acad Sci U S A. 1972 Jun;69(6):1408–1412. doi: 10.1073/pnas.69.6.1408. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Bendiak B., Schachter H. Control of glycoprotein synthesis. Kinetic mechanism, substrate specificity, and inhibition characteristics of UDP-N-acetylglucosamine:alpha-D-mannoside beta 1-2 N-acetylglucosaminyltransferase II from rat liver. J Biol Chem. 1987 Apr 25;262(12):5784–5790. [PubMed] [Google Scholar]
  4. Bendiak B., Schachter H. Control of glycoprotein synthesis. Purification of UDP-N-acetylglucosamine:alpha-D-mannoside beta 1-2 N-acetylglucosaminyltransferase II from rat liver. J Biol Chem. 1987 Apr 25;262(12):5775–5783. [PubMed] [Google Scholar]
  5. Brockhausen I., Carver J. P., Schachter H. Control of glycoprotein synthesis. The use of oligosaccharide substrates and HPLC to study the sequential pathway for N-acetylglucosaminyltransferases I, II, III, IV, V, and VI in the biosynthesis of highly branched N-glycans by hen oviduct membranes. Biochem Cell Biol. 1988 Oct;66(10):1134–1151. doi: 10.1139/o88-131. [DOI] [PubMed] [Google Scholar]
  6. Chirgwin J. M., Przybyla A. E., MacDonald R. J., Rutter W. J. Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease. Biochemistry. 1979 Nov 27;18(24):5294–5299. doi: 10.1021/bi00591a005. [DOI] [PubMed] [Google Scholar]
  7. Chou P. Y., Fasman G. D. Prediction of the secondary structure of proteins from their amino acid sequence. Adv Enzymol Relat Areas Mol Biol. 1978;47:45–148. doi: 10.1002/9780470122921.ch2. [DOI] [PubMed] [Google Scholar]
  8. D'Agostaro G., Bendiak B., Tropak M. Cloning of cDNA encoding the membrane-bound form of bovine beta 1,4-galactosyltransferase. Eur J Biochem. 1989 Jul 15;183(1):211–217. doi: 10.1111/j.1432-1033.1989.tb14915.x. [DOI] [PubMed] [Google Scholar]
  9. Dunphy W. G., Brands R., Rothman J. E. Attachment of terminal N-acetylglucosamine to asparagine-linked oligosaccharides occurs in central cisternae of the Golgi stack. Cell. 1985 Feb;40(2):463–472. doi: 10.1016/0092-8674(85)90161-8. [DOI] [PubMed] [Google Scholar]
  10. Harpaz N., Schachter H. Control of glycoprotein synthesis. Bovine colostrum UDP-N-acetylglucosamine:alpha-D-mannoside beta 2-N-acetylglucosaminyltransferase I. Separation from UDP-N-acetylglucosamine:alpha-D-mannoside beta 2-N-acetylglucosaminyltransferase II, partial purification, and substrate specificity. J Biol Chem. 1980 May 25;255(10):4885–4893. [PubMed] [Google Scholar]
  11. Hollis G. F., Douglas J. G., Shaper N. L., Shaper J. H., Stafford-Hollis J. M., Evans R. J., Kirsch I. R. Genomic structure of murine beta-1,4-galactosyltransferase. Biochem Biophys Res Commun. 1989 Aug 15;162(3):1069–1075. doi: 10.1016/0006-291x(89)90782-1. [DOI] [PubMed] [Google Scholar]
  12. Joziasse D. H., Shaper J. H., Van den Eijnden D. H., Van Tunen A. J., Shaper N. L. Bovine alpha 1----3-galactosyltransferase: isolation and characterization of a cDNA clone. Identification of homologous sequences in human genomic DNA. J Biol Chem. 1989 Aug 25;264(24):14290–14297. [PubMed] [Google Scholar]
  13. Klapper D. G., Wilde C. E., 3rd, Capra J. D. Automated amino acid sequence of small peptides utilizing Polybrene. Anal Biochem. 1978 Mar;85(1):126–131. doi: 10.1016/0003-2697(78)90282-8. [DOI] [PubMed] [Google Scholar]
  14. Kornfeld R., Kornfeld S. Assembly of asparagine-linked oligosaccharides. Annu Rev Biochem. 1985;54:631–664. doi: 10.1146/annurev.bi.54.070185.003215. [DOI] [PubMed] [Google Scholar]
  15. Lammers G., Jamieson J. C. The role of a cathepsin D-like activity in the release of Gal beta 1-4GlcNAc alpha 2-6-sialyltransferase from rat liver Golgi membranes during the acute-phase response. Biochem J. 1988 Dec 1;256(2):623–631. doi: 10.1042/bj2560623. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Larsen R. D., Rajan V. P., Ruff M. M., Kukowska-Latallo J., Cummings R. D., Lowe J. B. Isolation of a cDNA encoding a murine UDPgalactose:beta-D-galactosyl- 1,4-N-acetyl-D-glucosaminide alpha-1,3-galactosyltransferase: expression cloning by gene transfer. Proc Natl Acad Sci U S A. 1989 Nov;86(21):8227–8231. doi: 10.1073/pnas.86.21.8227. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Larsen R. D., Rivera-Marrero C. A., Ernst L. K., Cummings R. D., Lowe J. B. Frameshift and nonsense mutations in a human genomic sequence homologous to a murine UDP-Gal:beta-D-Gal(1,4)-D-GlcNAc alpha(1,3)-galactosyltransferase cDNA. J Biol Chem. 1990 Apr 25;265(12):7055–7061. [PubMed] [Google Scholar]
  18. Lee C. C., Wu X. W., Gibbs R. A., Cook R. G., Muzny D. M., Caskey C. T. Generation of cDNA probes directed by amino acid sequence: cloning of urate oxidase. Science. 1988 Mar 11;239(4845):1288–1291. doi: 10.1126/science.3344434. [DOI] [PubMed] [Google Scholar]
  19. Masibay A. S., Qasba P. K. Expression of bovine beta-1,4-galactosyltransferase cDNA in COS-7 cells. Proc Natl Acad Sci U S A. 1989 Aug;86(15):5733–5737. doi: 10.1073/pnas.86.15.5733. [DOI] [PMC free article] [PubMed] [Google Scholar]
  20. Masri K. A., Appert H. E., Fukuda M. N. Identification of the full-length coding sequence for human galactosyltransferase (beta-N-acetylglucosaminide: beta 1,4-galactosyltransferase). Biochem Biophys Res Commun. 1988 Dec 15;157(2):657–663. doi: 10.1016/s0006-291x(88)80300-0. [DOI] [PubMed] [Google Scholar]
  21. Moremen K. W. Isolation of a rat liver Golgi mannosidase II clone by mixed oligonucleotide-primed amplification of cDNA. Proc Natl Acad Sci U S A. 1989 Jul;86(14):5276–5280. doi: 10.1073/pnas.86.14.5276. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Narimatsu H., Sinha S., Brew K., Okayama H., Qasba P. K. Cloning and sequencing of cDNA of bovine N-acetylglucosamine (beta 1-4)galactosyltransferase. Proc Natl Acad Sci U S A. 1986 Jul;83(13):4720–4724. doi: 10.1073/pnas.83.13.4720. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Nishikawa Y., Pegg W., Paulsen H., Schachter H. Control of glycoprotein synthesis. Purification and characterization of rabbit liver UDP-N-acetylglucosamine:alpha-3-D-mannoside beta-1,2-N-acetylglucosaminyltransferase I. J Biol Chem. 1988 Jun 15;263(17):8270–8281. [PubMed] [Google Scholar]
  24. Oppenheimer C. L., Eckhardt A. E., Hill R. L. The nonidentity of porcine N-acetylglucosaminyltransferases I and II. J Biol Chem. 1981 Nov 25;256(22):11477–11482. [PubMed] [Google Scholar]
  25. Oppenheimer C. L., Hill R. L. Purification and characterization of a rabbit liver alpha 1 goes to 3 mannoside beta 1 goes to 2 N-acetylglucosaminyltransferase. J Biol Chem. 1981 Jan 25;256(2):799–804. [PubMed] [Google Scholar]
  26. Paulson J. C., Colley K. J. Glycosyltransferases. Structure, localization, and control of cell type-specific glycosylation. J Biol Chem. 1989 Oct 25;264(30):17615–17618. [PubMed] [Google Scholar]
  27. Pierce M., Arango J. Rous sarcoma virus-transformed baby hamster kidney cells express higher levels of asparagine-linked tri- and tetraantennary glycopeptides containing [GlcNAc-beta (1,6)Man-alpha (1,6)Man] and poly-N-acetyllactosamine sequences than baby hamster kidney cells. J Biol Chem. 1986 Aug 15;261(23):10772–10777. [PubMed] [Google Scholar]
  28. Rademacher T. W., Parekh R. B., Dwek R. A. Glycobiology. Annu Rev Biochem. 1988;57:785–838. doi: 10.1146/annurev.bi.57.070188.004033. [DOI] [PubMed] [Google Scholar]
  29. Russo R. N., Shaper N. L., Shaper J. H. Bovine beta 1----4-galactosyltransferase: two sets of mRNA transcripts encode two forms of the protein with different amino-terminal domains. In vitro translation experiments demonstrate that both the short and the long forms of the enzyme are type II membrane-bound glycoproteins. J Biol Chem. 1990 Feb 25;265(6):3324–3331. [PubMed] [Google Scholar]
  30. Sanger F., Nicklen S., Coulson A. R. DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463–5467. doi: 10.1073/pnas.74.12.5463. [DOI] [PMC free article] [PubMed] [Google Scholar]
  31. Schachter H. Biosynthetic controls that determine the branching and microheterogeneity of protein-bound oligosaccharides. Biochem Cell Biol. 1986 Mar;64(3):163–181. doi: 10.1139/o86-026. [DOI] [PubMed] [Google Scholar]
  32. Schachter H., Brockhausen I., Hull E. High-performance liquid chromatography assays for N-acetylglucosaminyltransferases involved in N- and O-glycan synthesis. Methods Enzymol. 1989;179:351–397. doi: 10.1016/0076-6879(89)79138-2. [DOI] [PubMed] [Google Scholar]
  33. Schachter H., Narasimhan S., Gleeson P., Vella G. Control of branching during the biosynthesis of asparagine-linked oligosaccharides. Can J Biochem Cell Biol. 1983 Sep;61(9):1049–1066. doi: 10.1139/o83-134. [DOI] [PubMed] [Google Scholar]
  34. Shaper J. H., Hollis G. F., Shaper N. L. Evidence for two forms of murine beta-1,4-galactosyltransferase based on cloning studies. Biochimie. 1988 Nov;70(11):1683–1688. doi: 10.1016/0300-9084(88)90303-3. [DOI] [PubMed] [Google Scholar]
  35. Shaper N. L., Hollis G. F., Douglas J. G., Kirsch I. R., Shaper J. H. Characterization of the full length cDNA for murine beta-1,4-galactosyltransferase. Novel features at the 5'-end predict two translational start sites at two in-frame AUGs. J Biol Chem. 1988 Jul 25;263(21):10420–10428. [PubMed] [Google Scholar]
  36. Shaper N. L., Shaper J. H., Meuth J. L., Fox J. L., Chang H., Kirsch I. R., Hollis G. F. Bovine galactosyltransferase: identification of a clone by direct immunological screening of a cDNA expression library. Proc Natl Acad Sci U S A. 1986 Mar;83(6):1573–1577. doi: 10.1073/pnas.83.6.1573. [DOI] [PMC free article] [PubMed] [Google Scholar]
  37. Shaper N. L., Wright W. W., Shaper J. H. Murine beta 1,4-galactosyltransferase: both the amounts and structure of the mRNA are regulated during spermatogenesis. Proc Natl Acad Sci U S A. 1990 Jan;87(2):791–795. doi: 10.1073/pnas.87.2.791. [DOI] [PMC free article] [PubMed] [Google Scholar]
  38. Simpson R. J., Moritz R. L., Begg G. S., Rubira M. R., Nice E. C. Micropreparative procedures for high sensitivity sequencing of peptides and proteins. Anal Biochem. 1989 Mar;177(2):221–236. doi: 10.1016/0003-2697(89)90044-4. [DOI] [PubMed] [Google Scholar]
  39. Simpson R. J., Moritz R. L., Nice E. E., Grego B. A high-performance liquid chromatography procedure for recovering subnanomole amounts of protein from SDS-gel electroeluates for gas-phase sequence analysis. Eur J Biochem. 1987 May 15;165(1):21–29. doi: 10.1111/j.1432-1033.1987.tb11189.x. [DOI] [PubMed] [Google Scholar]
  40. Simpson R. J., Moritz R. L., Rubira M. R., Van Snick J. Murine hybridoma/plasmacytoma growth factor. Complete amino-acid sequence and relation to human interleukin-6. Eur J Biochem. 1988 Sep 1;176(1):187–197. doi: 10.1111/j.1432-1033.1988.tb14267.x. [DOI] [PubMed] [Google Scholar]
  41. Smith D. F., Larsen R. D., Mattox S., Lowe J. B., Cummings R. D. Transfer and expression of a murine UDP-Gal:beta-D-Gal-alpha 1,3-galactosyltransferase gene in transfected Chinese hamster ovary cells. Competition reactions between the alpha 1,3-galactosyltransferase and the endogenous alpha 2,3-sialyltransferase. J Biol Chem. 1990 Apr 15;265(11):6225–6234. [PubMed] [Google Scholar]
  42. Tosi M., Young R. A., Hagenbüchle O., Schibler U. Multiple polyadenylation sites in a mouse alpha-amylase gene. Nucleic Acids Res. 1981 May 25;9(10):2313–2323. doi: 10.1093/nar/9.10.2313. [DOI] [PMC free article] [PubMed] [Google Scholar]
  43. Weinstein J., Lee E. U., McEntee K., Lai P. H., Paulson J. C. Primary structure of beta-galactoside alpha 2,6-sialyltransferase. Conversion of membrane-bound enzyme to soluble forms by cleavage of the NH2-terminal signal anchor. J Biol Chem. 1987 Dec 25;262(36):17735–17743. [PubMed] [Google Scholar]
  44. Yamamoto F., Marken J., Tsuji T., White T., Clausen H., Hakomori S. Cloning and characterization of DNA complementary to human UDP-GalNAc: Fuc alpha 1----2Gal alpha 1----3GalNAc transferase (histo-blood group A transferase) mRNA. J Biol Chem. 1990 Jan 15;265(2):1146–1151. [PubMed] [Google Scholar]
  45. Yamashita K., Tachibana Y., Ohkura T., Kobata A. Enzymatic basis for the structural changes of asparagine-linked sugar chains of membrane glycoproteins of baby hamster kidney cells induced by polyoma transformation. J Biol Chem. 1985 Apr 10;260(7):3963–3969. [PubMed] [Google Scholar]

Articles from Proceedings of the National Academy of Sciences of the United States of America are provided here courtesy of National Academy of Sciences

RESOURCES