The reaction of cadmium dichloride with the ligand 5,6-bis(pyridin-2-yl)pyrazine-2,3-dicarboxylic acid leads to the formation of a two-dimensional coordination polymer.
Keywords: crystal structure, cadmium(II), sevenfold coordination, pentagonal bipyramid, two-dimensional coordination polymer, network, hydrogen bonding
Abstract
The reaction of 5,6-bis(pyridin-2-yl)pyrazine-2,3-dicarboxylic acid with cadmium dichloride leads to the formation of the title two-dimensional coordination polymer, [Cd(C16H8N4O4)(H2O)2]n. The metal atom is sevenfold coordinated by one pyrazine and one pyridine N atom, two water O atoms, and by two carboxylate O atoms, one of which bridges two CdII atoms to form a Cd2O2 unit situated about a centre of inversion. Hence, the ligand coordinates to the cadmium atom in an N,N′,O-tridentate and an O-monodentate manner. Within the polymer network, there are a number of O—H⋯O hydrogen bonds present, involving the water molecules and the carboxylate O atoms. There are also C—H⋯N and C—H⋯O hydrogen bonds present. In the crystal, the polymer networks lie parallel to the bc plane. They are aligned back-to-back along the a axis with the non-coordinating pyridine rings directed into the space between the networks.
Chemical context
The crystal structure of the ligand 5,6-bis(pyridin-2-yl)pyrazine-2,3-dicarboxylic acid (H2L) and the chloride, perchlorate and hexafluorophosphate salts, have been reported on previously (Alfonso et al., 2001 ▸). Interestingly, the ligand crystallizes as a zwitterion in all four compounds. The reaction of H2L with CuBr2 (ratio 1:2) leads to the formation of a one-dimensional coordination polymer. On exposure to air, the compound loses the solvent of crystallization and four water molecules, transforming into a two-dimensional coordination polymer (Neels et al., 2003 ▸). In both cases, there are two crystallographically independent fivefold-coordinated copper atoms present and they all have almost perfect square-pyramidal geometry. Recently, we have reported on the crystal structures of the dimethyl and diethyl ester of the H2L ligand (Alfonso & Stoeckli-Evans, 2016a ▸). The reaction of the dimethyl ester of H2L with CdCl2 and HgCl2 leads to the formation of isotypic one-dimensional coordination polymers (Alfonso & Stoeckli-Evans, 2016b ▸). There the ligand coordinates to the metal atom via the pyridine N atoms, and they have MN2Cl2 fourfold bisphenoidal coordination geometry.
Structural commentary
The reaction of 5,6-bis(pyridin-2-yl)pyrazine-2,3-dicarboxylic acid with cadmium dichloride leads to the formation of the title two-dimensional coordination polymer (Fig. 1 ▸). Here the metal atom is sevenfold coordinated by one pyrazine N atom (N1), one pyridine N atom (N3) and two water O atoms (O1W and O2W), and by two carboxylate O atoms (O1 and O3). Atom O1 bridges two cadmium atoms to form a Cd2O2 unit situated about a centre of inversion; the Cd1⋯Cd1ii distance is 3.8753 (8) Å, while the Cd—O1 and Cd—O1ii bonds are, respectively, 2.371 (4) and 2.427 (4) Å, and the Cd1—O1⋯Cd1ii and O1—Cd⋯O1ii bond angles are 107.74 (13) and 72.26 (13)°, respectively. As can be seen in Fig. 1 ▸, the ligand coordinates to the cadmium atom in a tridentate (N,N,O) and a monodentate manner (O). It can be seen from the carboxylate C—O bond lengths [C15—O1 and C15—O2 are 1.255 (6) and 1.253 (6) Å, respectively, while C16—O3 and C16—O4 are 1.258 (6) and 1.227 (6) Å, respectively] that the negative charge is distributed over the O–C–O group for the first, but located on atom O3 for the second.
Figure 1.
A view of the molecular structure of the title coordination polymer, showing the atom labelling [symmetry codes: (i) x, −y +
, z −
; (ii) −x + 1, −y + 1, −z + 1; (iii) x, −y +
, z +
]. Displacement ellipsoids are drawn at the 50% probability level.
Selected bond lengths and angles involving atom Cd1 are given in Table 1 ▸. The Cd—Npyrazine (Cd1—N1) and the Cd—Npyridine (Cd1—N3) bond lengths are the same within 3 s.u.s. [2.418 (4) cf. 2.430 (4) Å]. The Cd—Owater bond lengths [2.301 (4) and 2.317 (3) Å] are shorter than the Cd—Ocarboxylate bond lengths [2.371 (4) and 2.377 (4) Å], while the bridging Cd1⋯O1ii distance is the longest at 2.427 (4) Å. The geometry of the sevenfold-coordinated cadmium atom can best be described as a distorted pentagonal bipyramid, with atoms O1,N1,N3,O2W,O1ii in the basal plane and atoms O1W,O3i in the apical positions with an O1W—Cd1—O3i bond angle of 157.41 (15)° (Table 1 ▸).
Table 1. Selected geometric parameters (Å, °).
| Cd1—O1 | 2.371 (4) | Cd1—N3 | 2.430 (4) |
| Cd1—O3i | 2.377 (4) | Cd1—O1W | 2.301 (4) |
| Cd1—N1 | 2.418 (4) | Cd1—O2W | 2.317 (3) |
| Cd1—O1ii | 2.427 (4) | ||
| Cd1—O1—Cd1ii | 107.74 (13) | O1W—Cd1—N1 | 91.62 (16) |
| O1W—Cd1—O3i | 157.41 (15) | O1W—Cd1—N3 | 87.87 (15) |
| O1—Cd1—O1ii | 72.26 (13) | O1W—Cd1—O1ii | 76.59 (15) |
| O1—Cd1—N1 | 67.98 (13) | O2W—Cd1—O3i | 87.05 (13) |
| N1—Cd1—N3 | 65.40 (14) | O1—Cd1—O3i | 80.38 (12) |
| O2W—Cd1—N3 | 78.01 (13) | O3i—Cd1—N1 | 91.67 (13) |
| O2W—Cd1—O1ii | 80.65 (13) | O3i—Cd1—O1ii | 86.60 (12) |
| O1W—Cd1—O2W | 104.67 (16) | O3i—Cd1—N3 | 113.74 (13) |
| O1W—Cd1—O1 | 80.18 (15) |
Symmetry codes: (i)
; (ii)
.
The coordinated pyridine ring (N3/C5-C9) and the carboxylate group (O1/O2/C15) are inclined to the pyrazine ring (r.m.s. deviation = 0.03 Å) by 16.9 (2) and 1.9 (6)°, respectively. The non-coordinating pyridine ring (N4/C10–C14) and the second coordinating carboxylate group (O3/O4/C16) are inclined to the pyrazine ring by 60.2 (3) and 89.1 (11)°, respectively. The two pyridine rings are inclined to one another by 75.4 (3) °.
Supramolecular features
In the crystal, the two-dimensional polymer networks lie parallel to the bc plane, as illustrated in Figs. 2 ▸ and 3 ▸. The networks are aligned back-to-back along the a axis, with the non-coordinating pyridine rings directed into the space between the networks (Fig. 4 ▸). Within the networks there are a number of O—H⋯O hydrogen bonds present, involving the water molecules and the carboxylate O atoms (Table 2 ▸ and Fig. 5 ▸). There are also C—H⋯O and C—H⋯N hydrogen bonds present within the network (Table 2 ▸).
Figure 2.
A view along the a axis of the title two-dimensional coordination polymer. The C-bound H atoms have been omitted for clarity.
Figure 3.
A view along the c axis of the title two-dimensional coordination polymer. The C-bound H atoms have been omitted for clarity.
Figure 4.
A view in projection down the c axis of the crystal packing of the title two-dimensional coordination polymer. The C-bound H atoms have been omitted for clarity.
Table 2. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O1W—H1WA⋯O3iii | 0.82 (2) | 2.22 (3) | 2.974 (6) | 152 (5) |
| O1W—H1WB⋯O2iv | 0.84 (2) | 2.05 (4) | 2.805 (6) | 150 (7) |
| O2W—H2WA⋯O4i | 0.85 (2) | 1.88 (3) | 2.630 (6) | 146 (5) |
| O2W—H2WB⋯O2ii | 0.85 (2) | 1.88 (2) | 2.692 (5) | 159 (5) |
| C9—H9⋯O3v | 0.94 | 2.52 | 3.245 (6) | 134 |
| C14—H14⋯N4vi | 0.94 | 2.62 | 3.372 (8) | 137 |
Symmetry codes: (i)
; (ii)
; (iii)
; (iv)
; (v)
; (vi)
.
Figure 5.
A view normal to plane (1
0) of the O—H⋯O hydrogen bonds (dashed lines; see Table 2 ▸) within the polymer network, involving the carboxylate O atoms (red balls) and the coordinating water molecules. The C atoms and C-bound H atoms of the ligand have been omitted for clarity.
Database survey
A search of the Cambridge Structural Database (CSD, Version 5.37, last update May 2016; Groom et al., 2016 ▸) for the ligand H2L gave eight hits. All of these structures have been mentioned in the Chemical context above. A search for cadmium complexes with the Cd atom coordinated by two N atoms, two water molecules and three O atoms, two of which are carboxylate O atoms, gave seven hits. One of these compounds, catena-[(μ2-1,1′-(butane-1,4-diyl)bis(5,6-dimethyl-1H-benzimidazole)]bis(μ2-pyridine-2,6-dicarboxylato)tetraaquadicadmium dihydrate) [CSD refcode: FAVHIV; Jiao et al., 2012 ▸] has a Cd2O2 unit formed about an inversion centre as in the title compound. In FAVHIV, the Cd⋯Cd distance and the angles Cd—O⋯Cd and O—Cd⋯O are, respectively, 4.0408 (5) Å, and 111.05 (8) and 68.95 (7)°, compared to 3.8753 (8) Å, and 107.74 (13) and 72.26 (13) °, respectively, in the title compound. However, such an arrangement is extremely common for cadmium(II) complexes (over 600 hits in the CSD) and the bond lengths and angles vary enormously; for example the Cd⋯Cd distance varies from ca 3.0 to 4.3 Å, the Cd—O⋯Cd angle varies from ca 82 to 119° and the O—Cd⋯O angle from ca 60 to 90°.
Synthesis and crystallization
The synthesis of the ligand 5,6-bis(pyridin-2-yl)pyrazine-2,3-dicarboxylic acid (H2L) has been reported previously (Alfonso et al., 2001 ▸).
Synthesis of the title coordination polymer: H2L (32 mg, 0.10 mmol) was added to an aqueous solution (25 ml) of CdCl2·2H2O (22 mg, 0.10 mmol). The colourless solution immediately obtained was stirred for 1 h at room temperature. The reaction mixture was then filtered and the filtrate allowed to evaporate slowly at room temperature. After two weeks, small colourless plate-like crystals of the title compound were obtained, separated by filtration and dried in air (yield: 40 mg, 42.5%). Selected IR bands (KBr pellet, cm−1): ν 1630(m), 1598(vs), 1533(m), 1469(m), 1442(m), 1414(m), 1362(s), 1301(m), 1273(m), 1176(m), 1165(m), 1119(m), 1043(w), 992(w), 829(m), 789(m), 759(m), 675(m), 562(m), 513(m). Analysis for C16H12N4O6Cd (468.71): calculated: C 41.00, H 2.58, N 11.95%; found: C 40.70, H 2.43, N 11.80%.
Refinement
Crystal data, data collection and structure refinement details are summarized in Table 3 ▸. The water H atoms were located in a difference Fourier map and refined with distance restraints: O—H = 0.84 (2) and H⋯H = 1.35 (2) Å, with U iso(H) = 1.5U eq(O). The C-bound H atoms were included in calculated positions and treated as riding atoms: C—H = 0.94 Å with U iso(H) = 1.2U eq(C). The best crystal available was extremely thin (0.01 mm) and as the shape of the crystal was irregular it was not possible to carry out a numerical absorption correction. The displacement ellipsoids for two carboxylate O atoms (O2 and O4) and a water O atom (OW1) are large but attempts to split these atoms were not successful.
Table 3. Experimental details.
| Crystal data | |
| Chemical formula | [Cd(C16H8N4O4)(H2O)2] |
| M r | 468.70 |
| Crystal system, space group | Monoclinic, P21/c |
| Temperature (K) | 223 |
| a, b, c (Å) | 16.6854 (12), 7.0799 (6), 13.4537 (10) |
| β (°) | 96.236 (9) |
| V (Å3) | 1579.9 (2) |
| Z | 4 |
| Radiation type | Mo Kα |
| μ (mm−1) | 1.43 |
| Crystal size (mm) | 0.30 × 0.20 × 0.01 |
| Data collection | |
| Diffractometer | Stoe IPDS 1 image plate |
| Absorption correction | Multi-scan (MULABS; Spek, 2009 ▸) |
| T min, T max | 0.900, 1.00 |
| No. of measured, independent and observed [I > 2σ(I)] reflections | 11782, 3056, 1781 |
| R int | 0.129 |
| (sin θ/λ)max (Å−1) | 0.615 |
| Refinement | |
| R[F 2 > 2σ(F 2)], wR(F 2), S | 0.038, 0.063, 0.75 |
| No. of reflections | 3056 |
| No. of parameters | 257 |
| No. of restraints | 6 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 0.53, −0.59 |
Supplementary Material
Crystal structure: contains datablock(s) I, Global. DOI: 10.1107/S2056989016012858/pk2589sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989016012858/pk2589Isup2.hkl
CCDC reference: 1498382
Additional supporting information: crystallographic information; 3D view; checkCIF report
Acknowledgments
We are grateful to the Swiss National Science Foundation and the University of Neuchâtel for financial support.
supplementary crystallographic information
Crystal data
| [Cd(C16H8N4O4)(H2O)2] | F(000) = 928 |
| Mr = 468.70 | Dx = 1.970 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| a = 16.6854 (12) Å | Cell parameters from 5000 reflections |
| b = 7.0799 (6) Å | θ = 1.7–26.1° |
| c = 13.4537 (10) Å | µ = 1.43 mm−1 |
| β = 96.236 (9)° | T = 223 K |
| V = 1579.9 (2) Å3 | Plate, colourless |
| Z = 4 | 0.30 × 0.20 × 0.01 mm |
Data collection
| Stoe IPDS 1 image plate diffractometer | 3056 independent reflections |
| Radiation source: fine-focus sealed tube | 1781 reflections with I > 2σ(I) |
| Plane graphite monochromator | Rint = 0.129 |
| φ rotation scans | θmax = 25.9°, θmin = 2.5° |
| Absorption correction: multi-scan (MULABS; Spek, 2009) | h = −20→20 |
| Tmin = 0.900, Tmax = 1.00 | k = −8→8 |
| 11782 measured reflections | l = −16→16 |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: mixed |
| R[F2 > 2σ(F2)] = 0.038 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.063 | w = 1/[σ2(Fo2) + (0.0062P)2] where P = (Fo2 + 2Fc2)/3 |
| S = 0.75 | (Δ/σ)max = 0.001 |
| 3056 reflections | Δρmax = 0.53 e Å−3 |
| 257 parameters | Δρmin = −0.59 e Å−3 |
| 6 restraints | Extinction correction: SHELXL2014 (Sheldrick, 2015), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.00055 (16) |
Special details
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| Cd1 | 0.39911 (3) | 0.63678 (6) | 0.47689 (3) | 0.01231 (13) | |
| O1 | 0.4663 (2) | 0.3932 (6) | 0.5741 (2) | 0.0160 (9) | |
| O2 | 0.4579 (2) | 0.1638 (6) | 0.6875 (3) | 0.0266 (10) | |
| O3 | 0.3636 (2) | 0.1259 (6) | 0.8712 (2) | 0.0207 (9) | |
| O4 | 0.3010 (3) | −0.0413 (6) | 0.7454 (3) | 0.0436 (14) | |
| O1W | 0.4770 (3) | 0.8162 (6) | 0.5928 (3) | 0.0412 (13) | |
| H1WA | 0.520 (2) | 0.780 (9) | 0.623 (4) | 0.062* | |
| H1WB | 0.457 (3) | 0.898 (7) | 0.628 (4) | 0.062* | |
| O2W | 0.3837 (2) | 0.8219 (5) | 0.3341 (2) | 0.0189 (10) | |
| H2WA | 0.355 (2) | 0.766 (7) | 0.287 (3) | 0.028* | |
| H2WB | 0.4295 (16) | 0.833 (8) | 0.312 (3) | 0.028* | |
| N1 | 0.3193 (3) | 0.5188 (6) | 0.6031 (3) | 0.0130 (10) | |
| N2 | 0.2284 (3) | 0.3495 (7) | 0.7347 (3) | 0.0156 (10) | |
| N3 | 0.2853 (2) | 0.8351 (6) | 0.5067 (3) | 0.0131 (10) | |
| N4 | 0.0603 (3) | 0.5341 (6) | 0.6152 (3) | 0.0222 (12) | |
| C1 | 0.2472 (3) | 0.5920 (7) | 0.6161 (3) | 0.0096 (12) | |
| C2 | 0.2003 (3) | 0.4982 (7) | 0.6816 (4) | 0.0128 (13) | |
| C3 | 0.3478 (3) | 0.3673 (9) | 0.6546 (3) | 0.0100 (10) | |
| C4 | 0.3025 (3) | 0.2842 (7) | 0.7250 (4) | 0.0102 (13) | |
| C5 | 0.2290 (3) | 0.7774 (7) | 0.5650 (4) | 0.0122 (13) | |
| C6 | 0.1657 (3) | 0.8955 (8) | 0.5818 (3) | 0.0186 (14) | |
| H6 | 0.1260 | 0.8536 | 0.6211 | 0.022* | |
| C7 | 0.1608 (4) | 1.0747 (7) | 0.5410 (4) | 0.0196 (14) | |
| H7 | 0.1174 | 1.1544 | 0.5516 | 0.024* | |
| C8 | 0.2194 (3) | 1.1351 (9) | 0.4850 (3) | 0.0166 (11) | |
| H8 | 0.2175 | 1.2573 | 0.4576 | 0.020* | |
| C9 | 0.2815 (3) | 1.0138 (7) | 0.4696 (4) | 0.0156 (13) | |
| H9 | 0.3224 | 1.0560 | 0.4322 | 0.019* | |
| C10 | 0.1146 (4) | 0.5462 (7) | 0.6958 (4) | 0.0179 (14) | |
| C11 | 0.0946 (4) | 0.5917 (8) | 0.7907 (4) | 0.0249 (15) | |
| H11 | 0.1347 | 0.6018 | 0.8453 | 0.030* | |
| C12 | 0.0141 (4) | 0.6216 (10) | 0.8025 (4) | 0.0285 (14) | |
| H12 | −0.0016 | 0.6492 | 0.8660 | 0.034* | |
| C13 | −0.0426 (4) | 0.6106 (9) | 0.7204 (5) | 0.0333 (16) | |
| H13 | −0.0974 | 0.6328 | 0.7263 | 0.040* | |
| C14 | −0.0169 (4) | 0.5661 (8) | 0.6298 (5) | 0.0294 (17) | |
| H14 | −0.0560 | 0.5574 | 0.5741 | 0.035* | |
| C15 | 0.4309 (3) | 0.3025 (7) | 0.6364 (4) | 0.0140 (14) | |
| C16 | 0.3259 (3) | 0.1061 (8) | 0.7857 (4) | 0.0146 (13) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Cd1 | 0.0136 (2) | 0.01131 (19) | 0.01235 (19) | 0.0013 (3) | 0.00290 (13) | 0.0012 (2) |
| O1 | 0.015 (2) | 0.019 (2) | 0.0148 (18) | −0.001 (2) | 0.0050 (16) | 0.0052 (18) |
| O2 | 0.023 (2) | 0.026 (3) | 0.034 (2) | 0.013 (2) | 0.0159 (18) | 0.021 (2) |
| O3 | 0.032 (2) | 0.019 (2) | 0.0108 (18) | 0.011 (2) | 0.0008 (17) | −0.002 (2) |
| O4 | 0.064 (4) | 0.015 (2) | 0.042 (3) | −0.011 (2) | −0.039 (3) | 0.003 (2) |
| O1W | 0.029 (3) | 0.032 (3) | 0.057 (3) | 0.010 (2) | −0.018 (2) | −0.031 (2) |
| O2W | 0.017 (2) | 0.023 (3) | 0.017 (2) | −0.003 (2) | −0.0011 (17) | 0.0062 (17) |
| N1 | 0.012 (3) | 0.017 (3) | 0.010 (2) | 0.003 (2) | 0.003 (2) | −0.0037 (19) |
| N2 | 0.018 (3) | 0.015 (2) | 0.014 (2) | 0.005 (3) | −0.0004 (19) | 0.002 (2) |
| N3 | 0.014 (3) | 0.007 (3) | 0.018 (2) | 0.002 (2) | 0.0006 (19) | 0.0031 (19) |
| N4 | 0.012 (3) | 0.027 (3) | 0.028 (3) | 0.004 (2) | 0.004 (2) | 0.002 (2) |
| C1 | 0.005 (3) | 0.017 (3) | 0.008 (2) | 0.001 (2) | 0.004 (2) | −0.002 (2) |
| C2 | 0.010 (3) | 0.014 (3) | 0.014 (3) | −0.007 (3) | −0.002 (2) | −0.002 (2) |
| C3 | 0.013 (3) | 0.010 (2) | 0.007 (2) | −0.004 (3) | 0.001 (2) | 0.001 (3) |
| C4 | 0.012 (3) | 0.010 (3) | 0.009 (3) | −0.005 (3) | 0.002 (2) | −0.003 (2) |
| C5 | 0.008 (3) | 0.017 (3) | 0.013 (3) | 0.000 (3) | 0.004 (2) | −0.001 (2) |
| C6 | 0.019 (3) | 0.021 (4) | 0.016 (3) | 0.004 (3) | 0.007 (2) | 0.003 (3) |
| C7 | 0.023 (4) | 0.015 (3) | 0.021 (3) | 0.011 (3) | 0.003 (3) | −0.004 (2) |
| C8 | 0.027 (3) | 0.007 (2) | 0.016 (3) | 0.004 (3) | 0.003 (2) | 0.001 (3) |
| C9 | 0.020 (4) | 0.017 (3) | 0.011 (3) | −0.002 (3) | 0.006 (3) | 0.001 (2) |
| C10 | 0.020 (4) | 0.014 (3) | 0.020 (3) | 0.002 (3) | 0.003 (3) | 0.006 (2) |
| C11 | 0.025 (4) | 0.024 (4) | 0.026 (3) | 0.002 (3) | 0.009 (3) | 0.004 (3) |
| C12 | 0.032 (4) | 0.021 (3) | 0.037 (3) | 0.003 (4) | 0.021 (3) | 0.004 (3) |
| C13 | 0.021 (4) | 0.022 (4) | 0.060 (4) | 0.003 (4) | 0.017 (3) | 0.002 (4) |
| C14 | 0.013 (4) | 0.028 (4) | 0.045 (4) | 0.003 (3) | −0.004 (3) | 0.006 (3) |
| C15 | 0.015 (4) | 0.015 (3) | 0.012 (3) | −0.003 (3) | 0.002 (3) | −0.006 (2) |
| C16 | 0.016 (3) | 0.012 (3) | 0.017 (3) | 0.005 (3) | 0.005 (2) | 0.002 (3) |
Geometric parameters (Å, º)
| Cd1—O1 | 2.371 (4) | N4—C14 | 1.344 (7) |
| Cd1—O3i | 2.377 (4) | C1—C2 | 1.407 (7) |
| Cd1—N1 | 2.418 (4) | C1—C5 | 1.498 (7) |
| Cd1—O1ii | 2.427 (4) | C2—C10 | 1.502 (8) |
| Cd1—N3 | 2.430 (4) | C3—C4 | 1.403 (7) |
| Cd1—O1W | 2.301 (4) | C3—C15 | 1.506 (7) |
| Cd1—O2W | 2.317 (3) | C4—C16 | 1.530 (7) |
| O1—C15 | 1.255 (6) | C5—C6 | 1.384 (7) |
| O1—Cd1ii | 2.427 (3) | C6—C7 | 1.381 (7) |
| O2—C15 | 1.253 (6) | C6—H6 | 0.9400 |
| O3—C16 | 1.258 (6) | C7—C8 | 1.366 (7) |
| O3—Cd1iii | 2.377 (4) | C7—H7 | 0.9400 |
| O4—C16 | 1.227 (6) | C8—C9 | 1.378 (7) |
| O1W—H1WA | 0.82 (2) | C8—H8 | 0.9400 |
| O1W—H1WB | 0.837 (19) | C9—H9 | 0.9400 |
| O2W—H2WA | 0.847 (19) | C10—C11 | 1.392 (7) |
| O2W—H2WB | 0.852 (19) | C11—C12 | 1.386 (8) |
| N1—C3 | 1.335 (7) | C11—H11 | 0.9400 |
| N1—C1 | 1.339 (6) | C12—C13 | 1.376 (8) |
| N2—C2 | 1.328 (7) | C12—H12 | 0.9400 |
| N2—C4 | 1.341 (7) | C13—C14 | 1.373 (8) |
| N3—C5 | 1.351 (6) | C13—H13 | 0.9400 |
| N3—C9 | 1.359 (6) | C14—H14 | 0.9400 |
| N4—C10 | 1.338 (7) | ||
| Cd1—O1—Cd1ii | 107.74 (13) | C1—C2—C10 | 125.1 (5) |
| O1W—Cd1—O3i | 157.41 (15) | N1—C3—C4 | 120.0 (5) |
| O1—Cd1—O1ii | 72.26 (13) | N1—C3—C15 | 116.3 (4) |
| O1—Cd1—N1 | 67.98 (13) | C4—C3—C15 | 123.6 (5) |
| N1—Cd1—N3 | 65.40 (14) | N2—C4—C3 | 119.4 (5) |
| O2W—Cd1—N3 | 78.01 (13) | N2—C4—C16 | 114.6 (4) |
| O2W—Cd1—O1ii | 80.65 (13) | C3—C4—C16 | 125.6 (5) |
| O1W—Cd1—O2W | 104.67 (16) | N3—C5—C6 | 120.2 (5) |
| O1W—Cd1—O1 | 80.18 (15) | N3—C5—C1 | 114.3 (5) |
| O1W—Cd1—N1 | 91.62 (16) | C6—C5—C1 | 125.1 (5) |
| O1W—Cd1—N3 | 87.87 (15) | C7—C6—C5 | 120.3 (5) |
| O1W—Cd1—O1ii | 76.59 (15) | C7—C6—H6 | 119.9 |
| O2W—Cd1—O3i | 87.05 (13) | C5—C6—H6 | 119.9 |
| O1—Cd1—O3i | 80.38 (12) | C8—C7—C6 | 119.4 (5) |
| O3i—Cd1—N1 | 91.67 (13) | C8—C7—H7 | 120.3 |
| O3i—Cd1—O1ii | 86.60 (12) | C6—C7—H7 | 120.3 |
| O3i—Cd1—N3 | 113.74 (13) | C7—C8—C9 | 118.9 (5) |
| O2W—Cd1—N1 | 139.31 (15) | C7—C8—H8 | 120.6 |
| O2W—Cd1—O1 | 150.65 (13) | C9—C8—H8 | 120.6 |
| N1—Cd1—O1ii | 139.91 (14) | N3—C9—C8 | 122.1 (5) |
| O1—Cd1—N3 | 131.34 (12) | N3—C9—H9 | 119.0 |
| O1ii—Cd1—N3 | 149.40 (14) | C8—C9—H9 | 119.0 |
| C15—O1—Cd1 | 120.8 (3) | N4—C10—C11 | 123.3 (5) |
| C15—O1—Cd1ii | 131.4 (4) | N4—C10—C2 | 116.9 (5) |
| C16—O3—Cd1iii | 121.8 (4) | C11—C10—C2 | 119.7 (5) |
| Cd1—O1W—H1WA | 124 (4) | C12—C11—C10 | 118.2 (6) |
| Cd1—O1W—H1WB | 122 (4) | C12—C11—H11 | 120.9 |
| H1WA—O1W—H1WB | 109 (3) | C10—C11—H11 | 120.9 |
| Cd1—O2W—H2WA | 111 (4) | C13—C12—C11 | 119.3 (5) |
| Cd1—O2W—H2WB | 109 (4) | C13—C12—H12 | 120.4 |
| H2WA—O2W—H2WB | 104 (3) | C11—C12—H12 | 120.4 |
| C3—N1—C1 | 121.2 (4) | C14—C13—C12 | 118.2 (6) |
| C3—N1—Cd1 | 116.7 (3) | C14—C13—H13 | 120.9 |
| C1—N1—Cd1 | 121.9 (3) | C12—C13—H13 | 120.9 |
| C2—N2—C4 | 119.7 (4) | N4—C14—C13 | 124.4 (6) |
| C5—N3—C9 | 119.1 (4) | N4—C14—H14 | 117.8 |
| C5—N3—Cd1 | 121.8 (3) | C13—C14—H14 | 117.8 |
| C9—N3—Cd1 | 118.9 (3) | O2—C15—O1 | 126.9 (5) |
| C10—N4—C14 | 116.5 (5) | O2—C15—C3 | 115.6 (5) |
| N1—C1—C2 | 117.9 (5) | O1—C15—C3 | 117.5 (5) |
| N1—C1—C5 | 114.8 (4) | O4—C16—O3 | 127.6 (5) |
| C2—C1—C5 | 127.0 (5) | O4—C16—C4 | 114.3 (5) |
| N2—C2—C1 | 121.6 (5) | O3—C16—C4 | 118.0 (5) |
| N2—C2—C10 | 113.3 (4) | ||
| C3—N1—C1—C2 | −3.4 (7) | C6—C7—C8—C9 | 1.0 (8) |
| Cd1—N1—C1—C2 | 171.5 (3) | C5—N3—C9—C8 | −3.6 (7) |
| C3—N1—C1—C5 | 171.2 (4) | Cd1—N3—C9—C8 | −178.9 (4) |
| Cd1—N1—C1—C5 | −13.9 (6) | C7—C8—C9—N3 | 1.2 (8) |
| C4—N2—C2—C1 | −1.1 (8) | C14—N4—C10—C11 | −0.9 (8) |
| C4—N2—C2—C10 | 176.2 (5) | C14—N4—C10—C2 | 176.1 (5) |
| N1—C1—C2—N2 | 4.7 (7) | N2—C2—C10—N4 | −117.2 (5) |
| C5—C1—C2—N2 | −169.2 (5) | C1—C2—C10—N4 | 60.0 (7) |
| N1—C1—C2—C10 | −172.3 (5) | N2—C2—C10—C11 | 59.9 (7) |
| C5—C1—C2—C10 | 13.8 (8) | C1—C2—C10—C11 | −122.9 (6) |
| C1—N1—C3—C4 | −1.2 (7) | N4—C10—C11—C12 | 1.5 (8) |
| Cd1—N1—C3—C4 | −176.3 (4) | C2—C10—C11—C12 | −175.3 (5) |
| C1—N1—C3—C15 | −177.7 (4) | C10—C11—C12—C13 | −1.7 (9) |
| Cd1—N1—C3—C15 | 7.1 (5) | C11—C12—C13—C14 | 1.3 (10) |
| C2—N2—C4—C3 | −3.6 (7) | C10—N4—C14—C13 | 0.4 (9) |
| C2—N2—C4—C16 | −176.7 (5) | C12—C13—C14—N4 | −0.7 (10) |
| N1—C3—C4—N2 | 4.8 (8) | Cd1—O1—C15—O2 | 175.2 (4) |
| C15—C3—C4—N2 | −178.9 (5) | Cd1ii—O1—C15—O2 | −2.5 (8) |
| N1—C3—C4—C16 | 177.2 (5) | Cd1—O1—C15—C3 | −6.1 (6) |
| C15—C3—C4—C16 | −6.5 (8) | Cd1ii—O1—C15—C3 | 176.2 (3) |
| C9—N3—C5—C6 | 3.7 (7) | N1—C3—C15—O2 | 177.9 (4) |
| Cd1—N3—C5—C6 | 178.9 (4) | C4—C3—C15—O2 | 1.5 (8) |
| C9—N3—C5—C1 | −169.7 (4) | N1—C3—C15—O1 | −0.9 (7) |
| Cd1—N3—C5—C1 | 5.5 (6) | C4—C3—C15—O1 | −177.3 (5) |
| N1—C1—C5—N3 | 5.2 (6) | Cd1iii—O3—C16—O4 | 1.6 (8) |
| C2—C1—C5—N3 | 179.3 (5) | Cd1iii—O3—C16—C4 | 177.4 (3) |
| N1—C1—C5—C6 | −167.8 (5) | N2—C4—C16—O4 | 82.7 (6) |
| C2—C1—C5—C6 | 6.3 (9) | C3—C4—C16—O4 | −90.0 (7) |
| N3—C5—C6—C7 | −1.5 (8) | N2—C4—C16—O3 | −93.7 (6) |
| C1—C5—C6—C7 | 171.1 (5) | C3—C4—C16—O3 | 93.6 (6) |
| C5—C6—C7—C8 | −0.8 (8) |
Symmetry codes: (i) x, −y+1/2, z−1/2; (ii) −x+1, −y+1, −z+1; (iii) x, −y+1/2, z+1/2.
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1W—H1WA···O3iv | 0.82 (2) | 2.22 (3) | 2.974 (6) | 152 (5) |
| O1W—H1WB···O2v | 0.84 (2) | 2.05 (4) | 2.805 (6) | 150 (7) |
| O2W—H2WA···O4i | 0.85 (2) | 1.88 (3) | 2.630 (6) | 146 (5) |
| O2W—H2WB···O2ii | 0.85 (2) | 1.88 (2) | 2.692 (5) | 159 (5) |
| C9—H9···O3vi | 0.94 | 2.52 | 3.245 (6) | 134 |
| C14—H14···N4vii | 0.94 | 2.62 | 3.372 (8) | 137 |
Symmetry codes: (i) x, −y+1/2, z−1/2; (ii) −x+1, −y+1, −z+1; (iv) −x+1, y+1/2, −z+3/2; (v) x, y+1, z; (vi) x, −y+3/2, z−1/2; (vii) −x, −y+1, −z+1.
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, Global. DOI: 10.1107/S2056989016012858/pk2589sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989016012858/pk2589Isup2.hkl
CCDC reference: 1498382
Additional supporting information: crystallographic information; 3D view; checkCIF report





