Correction: Predicting Carriers of Ongoing Selective Sweeps without Knowledge of the Favored Allele

In panel B of Fig 1, the two haplotypes on the right have incorrect scores of 17. The correct scores of these haplotypes are 18. Please view the correct Fig 1 here.

Fig 1. The HAF score.

Genealogies of three samples (n = 6) progressing through a selective sweep, from left to right. Neutral mutations are shown as red circles, and are numbered in red; the favored allele is shown as a red star. The 1-HAF score of each haplotype is shown below its corresponding leaf, in black. For the rightmost haplotype in (A), the binary haplotype vector h is shown along with its HAF-vector c, and 1-HAF and 2-HAF scores. Vector w^all lists the frequencies of all mutations. (A) The favored allele appears on a single haplotype. At this point in time, both the genealogy and the HAF score distribution are largely neutral. Coalescence times (T₂, …, T₆) are shown on the left, where T_k spans the epoch with exactly k lineages. (B) Carriers of the favored allele are distinguished by high HAF scores (in large part due to the long branch of high-frequency hitchhiking variation); non-carriers have low HAF scores. (C) After fixation, there is a sharp loss of diversity causing low HAF scores across the sample.