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. 2016 Nov 4;205(1):353–366. doi: 10.1534/genetics.116.195016

Table 3. Immune genes showing the highest global FST at nonsynonymous sites.

Gene Chr S Nucleotide diversity (π) (×1000) Fay and Wu’s H Population differentiation (FST)
Zim Neth Beij Ith Tas Zim Neth Beij Ith Tas Zim-Beij Zim-Neth Zim-Ith Zim-Tas Beij-Neth Beij-Ith Beij-Tas Neth-Tas Neth-Ith Ith-Tas Global
Tak1 X 7 0.278 0.204 0.085 0.254 0.142 −1.804 0.477 0.284 −4.974 −5.894 0.885 0.851 0.797 0.854 0.052 0.062 0.028 0.051 0.074 0.000 0.662
lectin-24A 2L 24 4.904 2.644 6.891 2.364 4.061 −4.875 −1.292 0.860 −2.839 −1.049 0.626 0.732 0.750 0.692 0.243 0.218 0.092 0.065 0.022 0.053 0.476
LysP 3L 4 2.740 0.321 0.814 0 0.339 0.821 −4.216 0.402 NA −4.162 0.470 0.510 0.580 0.499 0.036 0.043 0.035 0.000 0.024 0.028 0.401
DptA 2R 5 4.330 2.595 0.000 3.996 5.455 −0.215 −3.465 NA −1.703 −0.988 0.776 0.609 0.473 0.270 0.056 0.172 0.311 0.137 0.047 0.048 0.342
Ect4 3L 23 0.875 0.333 0.598 0.403 0.556 1.538 −0.572 −3.446 −3.677 −3.655 0.494 0.610 0.590 0.518 0.055 0.107 0.032 0.035 0.033 0.029 0.342
slpr X 15 1.136 0.270 0.456 0.107 0.203 0.294 0.646 0.426 0.537 0.610 0.202 0.394 0.439 0.413 0.418 0.479 0.432 0.012 0.038 0.000 0.340
Eb1 2R 2 0.662 0.000 0.355 0.810 0.459 0.578 NA 0.480 −2.043 −2.644 0.592 0.726 0.429 0.525 0.122 0.015 0.000 0.069 0.164 0.006 0.337
hep X 19 0.731 0.167 0.690 0.716 0.750 0.911 −1.777 −1.500 −2.023 −1.252 0.462 0.732 0.527 0.452 0.265 0.048 0.003 0.221 0.087 0.037 0.336
Tl 3R 36 2.940 1.137 1.067 0.803 1.154 0.040 1.191 1.095 −1.434 1.597 0.393 0.401 0.528 0.390 0.023 0.403 0.075 0.053 0.346 0.325 0.335
PGRP-LE X 9 0.540 1.384 0.307 1.637 1.895 0.595 −0.309 0.480 0.679 0.552 0.762 0.450 0.254 0.322 0.652 0.411 0.394 0.076 0.109 0.008 0.332
Dsp1 X 1 0 0 0.520 0 0 NA NA 0.546 NA NA 0.292 NA NA NA 0.326 0.342 0.334 NA NA NA 0.317
dnr1 2R 5 0.261 0.434 0.113 0.541 0.272 0.451 −1.145 0.284 0.647 0.477 0.039 0.583 0.126 0.052 0.588 0.076 0.000 0.499 0.287 0.028 0.308
Vps33B 3R 33 3.326 0.613 3.352 1.383 1.791 0.883 −2.409 −0.549 −4.373 −4.415 0.265 0.628 0.541 0.446 0.209 0.143 0.061 0.082 0.021 0.033 0.304
Adgf-A 3L 14 0.606 1.002 1.168 1.086 1.410 −3.002 −0.831 −0.351 −0.077 −1.049 0.388 0.630 0.543 0.153 0.285 0.132 0.073 0.343 0.066 0.212 0.301
modSP 3R 8 0.589 0.291 0.285 0.196 0.292 −0.537 0.607 0.502 0.537 0.611 0.502 0.516 0.433 0.300 0.060 0.082 0.158 0.176 0.106 0.005 0.299
crq 2L 4 0.135 0.092 0.117 0.450 0 0.318 0.234 0.284 0.331 NA 0.037 0.037 0.323 0.058 0.031 0.337 0.043 0.024 0.363 0.398 0.297
Atf-2 2R 5 1.534 0.535 0.941 0.741 1.035 −0.436 0.595 −1.134 0.810 0.828 0.236 0.475 0.395 0.255 0.474 0.357 0.361 0.100 0.000 0.071 0.292
Eph 4 5 0.202 0.152 0.053 0.221 0.203 −0.693 0.546 0.284 0.575 0.704 0.556 0.481 0.469 0.449 0.082 0.209 0.098 0.005 0.155 0.045 0.284
CHKov1 3R 15 5.429 1.783 3.623 2.430 4.302 0.281 −8.288 −5.975 −7.584 −3.864 0.402 0.571 0.530 0.356 0.038 0.037 0.000 0.066 0.000 0.048 0.273
DptB 2R 8 6.550 2.893 0.488 4.407 4.041 1.153 −2.478 0.284 −0.959 −0.673 0.638 0.453 0.306 0.280 0.191 0.206 0.305 0.043 0.053 0.007 0.272

Values that fall in the extreme 5% of the population’s distribution are marked with italic font. Chr, chromosome; S, number of segregating sites; Zim, Zimbabwe; Neth, the Netherlands; Beij, Beijing; Ith, Ithaca, NY; Tas, Tasmania.