Abstract
Xenopus laevis tadpoles can regenerate the spinal cord after injury but this capability is lost during metamorphosis. Comparative studies between pre‐metamorphic and metamorphic Xenopus stages can aid towards understanding the molecular mechanisms of spinal cord regeneration. Analysis of a previous transcriptome‐wide study suggests that, in response to injury, the JAK‐STAT pathway is differentially activated in regenerative and non‐regenerative stages. We characterized the activation of the JAK‐STAT pathway and found that regenerative tadpoles have an early and transient activation. In contrast, the non‐regenerative stages have a delayed and sustained activation of the pathway. We found that STAT3 is activated in response to injury mainly in Sox2/3+ ependymal cells, motoneurons and sensory neurons. Finally, to study the role of temporal activation we generated a transgenic line to express a constitutively active version of STAT3. The sustained activation of the JAK‐STAT pathway in regenerative tadpoles reduced the expression of pro‐neurogenic genes normally upregulated in response to spinal cord injury, suggesting that activation of the JAK‐STAT pathway modulates the fate of neural progenitors.
Keywords: JAK‐STAT, Regeneration, STAT3, Spinal cord injury, Xenopus
1. INTRODUCTION
Approximately 180,000 spinal cord injury (SCI) cases are estimated to occur annually in the world (Lee, Cripps, Fitzharris, & Wing, 2014). SCI causes loss of motor and sensory functions below the lesion site, resulting in paralysis, loss of sensation, neuropathic pain and several other dysfunctions, impairing the quality of life and increasing the cost of living (Cannon, 2013; Thuret, Moon, & Gage, 2006). This type of injury produces massive cell death, including loss of neurons, astrocytes and oligodendrocytes, and almost no functional recovery is observed in mammals after SCI (Thuret et al., 2006).
Contrary to mammals, other vertebrates such as teleost fishes, urodele and anuran amphibians regenerate the spinal cord after injury (Becker, Wullimann, Becker, Bernhardt, & Schachner, 1997; Clarke, Alexander, & Holder, 1988; Filoni, Bosco, & Cioni, 1984). These model organisms are very useful to study how regenerative mechanisms such as neurogenesis and axon regeneration occur after SCI (Becker & Becker, 2015; Diaz‐Quiroz & Echeverri, 2013; Lee‐Liu, Edwards‐Faret, Tapia, & Larraín, 2013; Lee‐Liu, Méndez‐Olivos, Muñoz, & Larraín 2016; Tanaka & Ferretti, 2009). Between these regenerative models, anurans such as Xenopus laevis are an interesting model to study regeneration due to a stage‐dependent regenerative ability. At the beginning of metamorphosis, X. laevis larvae (stages 50−54) can regenerate the spinal cord while at later metamorphic and post‐metamorphic stages (stages 56−66) they lose this ability (Beattie, Bresnahan, & Lopate, 1990; Gaete et al., 2012; Gibbs, Chittur, & Szaro, 2011; Muñoz, Edwards‐Faret, Moreno, Zuñiga, Cline, & Larrain, 2015).
A comparative transcriptome‐wide analysis identified specific transcriptomic changes for regenerative (R stage) and non‐regenerative stages (NR stages) after SCI (Lee‐Liu et al., 2014). Furthermore, it was found that spinal cord regeneration proceeds through a massive and transient activation of ependymal Sox2/3+ cells, which have a limited response in the NR stage (Gaete et al., 2012; Muñoz et al., 2015). Although progress on the understanding of gene expression and cell response after SCI has been achieved, our knowledge on signaling pathways that could be controlling the differences in the response to SCI remains limited.
One of the signaling pathways known to control several cellular responses after SCI in mammals is the JAK‐STAT pathway. This pathway is involved in the transduction of several cytokines and growth factors (Kisseleva, Bhattacharya, Braunstein, & Schindler, 2002). Activation of the JAK‐STAT pathway leads to STAT (signal transducer and activator of transcription) phosphorylation, which causes its translocation to the nucleus to bind DNA regulatory sequences and regulate gene expression (Mertens & Darnell, 2007).
Different components of the JAK‐STAT pathway have been used to characterize pathway activation in response to SCI in mammals, such as an increase in the levels of cytokines (Pineau & Lacroix, 2007; Slaets et al., 2014; Tripathi & McTigue, 2008) or phosphorylated STAT3 (pSTAT3) (Herrmann et al., 2008; Hesp, Goldstein, Goldstein, Miranda, Kaspar, & McTigue, 2015; Tripathi & McTigue, 2008; Yamauchi et al., 2006), as well as an increase in direct targets of this pathway, such as SOCS3 (Park, Lin, & Lee, 2014). Moreover, functional studies have demonstrated that STAT3 is necessary for astrocyte response in glial scar formation, which in turn contains the inflammatory response and aids axon regeneration (Anderson et al., 2016; Herrmann et al., 2008; Okada et al., 2006; Wanner et al., 2013). In addition, gain‐of‐function studies have also shown that the JAK‐STAT pathway improves axon regeneration and collateral sprouting, enhancing motor recovery (Jin, Liu, Sun, Wang, Liu, & He, 2015; Lang, Bradley, Jacobi, Kerschensteiner, & Bareyre, 2013).
Here we aimed to characterize differences in the regulation of signaling pathways in response to SCI between the R and NR stages of X. laevis. We performed a pathway analysis in our previous transcriptomic database (Lee‐Liu et al., 2014) which suggested that mRNA levels of several components of the JAK‐STAT pathway are differentially regulated between the R and NR stages. Based on this, we performed a detailed characterization of the activation of the JAK‐STAT pathway in response to injury. Cytokines and socs3 mRNA levels were measured by quantitative reverse transcription polymerase chain reaction (RT‐qPCR) and pSTAT3 levels by western blot and immunofluorescence in the spinal cord of R and NR animals after SCI. A rapid (3 hr) and transient increase (up to 2 days) in pSTAT3 was observed in Sox2/3+ cells, motoneurons, sensory neurons and other cell types in regenerative animals. In contrast, the analysis of NR stages showed a delayed (3−24 hr) and sustained activation of STAT3 (up to 30 days) also in Sox2/3+ cells. Interestingly, overexpression of a constitutively active STAT3 (caSTAT3) reduced the expression of pro‐neurogenic genes in the spinal cord after SCI, suggesting that sustained activation of the JAK‐STAT pathway could diminish neurogenesis and impair spinal cord regeneration. Our results indicate that changes in the temporal activation of the JAK‐STAT pathway are related to the loss of regenerative capacity in X. laevis.
2. RESULTS
2.1. Temporal activation of the JAK‐STAT pathway in regenerative and non‐regenerative stages
Given that our previous transcriptomic analysis shows differential regulation of biological processes between R and NR stages, we decided to perform an analysis on the same data to identify differentially regulated signaling pathways. We analyzed the transcriptome‐wide profile, which included the RNA‐Seq data from spinal cord samples from R and NR stages at 1, 2, and 6 dpt, using the KEGG pathway database (Kanehisa et al., 2004). Between the pathways observed in the KEGG analysis, we found that 36 genes related to the JAK‐STAT pathway have a differential expression between the R and NR stages (Fig. 1). From these genes, 19 were grouped in expression clusters with an early upregulation (1–2 dpt) in the R stage and a sustained or late upregulation (6 dpt) in the NR stage (Fig. 1B, black lines). Between these genes the ligands lif and leptin and targets myc, ccnd‐3, and socs3 were included. In contrast, 10 genes were grouped in clusters with upregulation at 6 dpt on NR stages (Fig. 1B, dotted lines), including the protein tyrosine phosphatases ptpn6 and ptprc. This analysis suggests that the JAK‐STAT pathway is activated differentially in the R and NR stages.
To determine which are the temporal profiles of the activation of the JAK‐STAT pathway in response to SCI in the R and NR stages, we decided to characterize the activation of the pathway by different means: (i) RT‐qPCR analysis of pathway components and (ii) western blot analysis of the phosphorylation levels of the transcription factor STAT3. Considering that some genes were already upregulated at 1 dpt in our transcriptomic analysis (Fig. 1B) we also included in our analysis earlier time points at 3 or 6 hpt. We included NR56 stage tadpoles, which is the pro‐metamorphic stage where the loss of regenerative capacity begins (Muñoz et al., 2015). Thus, the analysis of stages NR56 and NR66 led us to have a better definition of the differences between regenerative and non‐regenerative responses.
For RT‐qPCR analysis we measured the mRNA levels for the ligands lif and leptin, and socs3, a direct target of the pathway, because they appear to be regulated in the KEGG analysis (Fig. 1). In R stage animals the three mRNAs had a significant upregulation as early as 6 hpt and also at 1 dpt; this upregulation was transient, as seen by the decrease to basal levels at 6 dpt (Fig. 2A, green bars). A tendency in these mRNAs to increase at 6 hpt and 1 dpt in response to injury in NR stages was also observed, although only statistically significant increases were observed for lif in the NR56 stage and for socs3 in both NR stages, but contrary to the regenerative tadpoles no return to basal levels was observed at 6 dpt (Fig. 2B, C, orange and red bars). To determine the extent of this upregulation at the NR66 stage, the levels of the three mRNAs were also analyzed at 15 and 30 dpt. mRNA for lif was not detected in sham and transected animals at 15−30 dpt. Downregulation of leptin levels was observed and, although socs3 transcripts showed a tendency to decrease between 15 and 30 dpt, no definitive return to basal levels was observed (Fig. 2C).
In addition to the RT‐qPCR results, western blot analyses against pSTAT3 and total STAT3 were performed to evaluate the activation of the pathway (Fig. 3). STAT3 analysis showed two isoforms recognized as STAT3α and STAT3β, the latter being 55 amino acids smaller. Although both isoforms can be phosphorylated and translocated to the nucleus to induce gene regulation (Maritano et al, 2004; Huang et al, 2007), in our experiments we only detected phosphorylation of the STAT3β isoform. In the R stage SCI induced STAT3 phosphorylation as early as 3 hpt and STAT3 remained phosphorylated until 2 dpt, decreasing to basal levels at 6 dpt (Fig. 3A, B). In contrast, in the NR stages increase of pSTAT3 levels was first detected between 3 hpt and 1 dpt and remained phosphorylated at least until 30 dpt (Fig. 3C−F).
In summary, we have found a transient activation of the JAK‐STAT pathway in response to SCI in R stage animals and a slightly delayed and sustained activation in NR stages, suggesting a possible correlation between the duration of JAK‐STAT activation and regenerative capacities.
2.2. Tissue‐specific activation of the JAK‐STAT pathway
Considering the temporal differences in the activation of the JAK‐STAT pathway between the R and NR stages, we decided to determine in which tissues this pathway is activated in response to injury. For this we performed immunofluorescence detection of pSTAT3 in spinal cord cryosections. Sagittal sections of R stage animals at 3 hpt showed a strong increase of nuclear pSTAT3 signal compared to sham operated animals (Fig. 4A−B′). Detailed analysis of pSTAT3 in coronal sections at different distances from the injury site demonstrated a gradient of activation: at 3 hpt the pSTAT3 signal has a massive presence in the stump of the spinal cord (Fig. 4C, C′), at 200 μm it is mainly activated in the ventricular zone (VZ) and in some scattered cells in the grey and white matter (Fig. 4D, D′), and at 600 μm it is only present in the ventricular layer at lower levels (Fig. 4E, E′). Immunofluorescence in coronal sections at 200 μm caudal to the spinal cord stump supported the western blot analysis, showing that STAT3 is still phosphorylated at 1 dpt and no signal was observed at 6 dpt (Fig. 4F−G′).
Immunofluorescence analysis for pSTAT3 was also performed in coronal sections of the spinal cords from NR56 stage animals (Fig. 5A′). In control animals 1 day after sham operation no signal was observed (Fig. 5B, B′). At 3 hpt pSTAT3+ cells were observed in the stump (Fig. 5C, C′) although not as many as for R stage animals (Fig. 4C, C′); at 3 hpt at 200 μm caudal to the injury site, cells in the VZ showed low levels of pSTAT3 and a strong signal was detected in motoneuron columns and dorsal root ganglion (DRG) (Fig. 5D, D*). Interestingly, compared to the response at 3 hpt, higher levels of pSTAT3 were observed in cells of the VZ and the grey matter at 1 dpt and the JAK‐STAT pathway remained active in the motoneurons and DRG (Fig. 5E, E*). At 3 hpt and 1 dpt pSTAT3+ cells were also found outside the spinal cord in the vertebrae and tissue limiting the notochord (Fig. 5D, D′, E, E′).
For the analysis of NR66 stage animals the spinal cords were separated from the vertebrae before processing; therefore external tissues such as the DRG and vertebrae were not analyzed (Fig. 6A). No signal for pSTAT3 was detected on sham operated animals (Fig. 6B, B′), but at 3 hpt pSTAT3+ cells were present in the VZ (Fig. 6C, C*, Fig. S2). Auto‐fluorescent signal from clots and blood vessels was observed on sections from NR66 stage animals because of increased bleeding after the injury. This signal is not specific because it was also detected in sections stained without the primary antibody (Fig. S2) and it is not localized on the nucleus (Fig. 6Cᶧ, C*). At 1 and 6 dpt more pSTAT3+ cells were detected in the VZ, the grey matter and the motoneuron columns (Fig. 6D−E*). In line with the western blot analysis at 30 dpt pSTAT3+ cells were still present in regions close to the lesion site (50−150 μm) in the VZ (Fig. 6F, F*).
In summary, we have found that at early times there is a massive presence of pSTAT3+ cells in R stage stumps. Activation in R stage animals is higher in the regions close to the injury site and a gradient of activation is observed up to a distance of 600 μm from the injury mainly on the VZ and in some nucleus on the grey matter. In NR stages pSTAT3 is found in the VZ, motoneuron columns and DRG. As demonstrated by RT‐qPCR and western blot analysis, pSTAT3 staining gives further support for the differences in the temporal activation of the JAK‐STAT pathway, which shows that it is very rapid and transient in the R stage but sustained for longer times in NR stages.
2.3. The JAK‐STAT pathway is activated in Sox2/3+ ependymal cells and neurons
In order to determine in which cells the JAK‐STAT pathway is activated in response to SCI we performed double immunofluorescence against pSTAT3 and cell‐type specific markers. We have shown previously that, in regenerative tadpoles, Sox2/3+ ependymal cells from the VZ proliferate after SCI and are necessary for spinal cord regeneration (Gaete et al., 2012; Muñoz et al., 2015). Considering that we detected pSTAT3+ cells in the VZ of the three stages analyzed, we decided to evaluate whether the JAK‐STAT pathway is activated in Sox2/3+ cells. We found that pSTAT3 co‐localized with Sox2/3+ cells in the R and NR stages (Fig. 7A−C″). Quantification of pSTAT3 and Sox2/3 co‐localization in the VZ showed an early and transient increase of pSTAT3+ Sox2/3+ cells in the R stage, but a sustained activation in the NR66 stage up to 1 month (Fig. 7D, E). Previously, we also showed that Sox2/3+ cells migrate to the ablation gap in the R stage (Muñoz et al., 2015); here we found that the Sox2/3+ cells present in the ablation gap were negative for pSTAT3 and were surrounded by pSTAT3+ cells (Fig. 7F−D″).
Considering that we found a pSTAT3 signal in the grey matter, motoneuron columns and DRG, we also analyzed JAK‐STAT activation in motoneurons and sensory neurons using an anti‐Islet1/2 antibody, a marker for both motoneurons in the spinal cord and sensory neurons in the DRG (Uemura et al., 2005). We found transient levels of pSTAT3 in Islet1/2+ motoneurons and sensory neurons in R stage animals at 3 hpt, which were then reduced at 1 dpt (Fig. S3A−B″). In contrast, in NR56 stage animals Islet1/2 was not expressed in motoneurons but was expressed at 3 hpt and 1 dpt in DRG and co‐localized with pSTAT3 (Fig. S3C−D″).
Lastly, as JAK‐STAT also controls neuro‐inflammation (Molet et al., 2015; Qin et al., 2012) we decided to characterize the levels of pSTAT3 in inflammatory cells using an antibody against CD45, a marker for leukocytes (Barritt & Turpen, 1995) that allows the identification of microglia and infiltrated cells. In R stage animals we found STAT3 activation on CD45+ cells, mainly located in the meninges (Fig. S4A, B′). This activation was transient but not rapid, and went up to 54% of pSTAT3+ CD45+ leukocytes at 1 dpt (Fig. S4C). In the NR66 stage a transient activation was also observed at 1dpt, but few positive cells were observed in the meninges and only 19% of the leukocytes were pSTAT3 positive (Fig. S4D−F).
In summary we found stage‐dependent differences in JAK‐STAT activation in relevant cell types for spinal cord regeneration. The regenerative stage has an early and transient activation in Sox2/Sox3+ ependymal cells, Islet1/2+ motoneurons and sensory neurons in response to SCI. Besides, the results suggested that the JAK‐STAT pathway also has a dynamic spatial control, as Sox2/Sox3+ cells populating the injury gap are negative for pSTAT3. In NR stages pSTAT3 also co‐localizes with Sox2/3 ependymal cells and Islet1/2 in the DRG. Interestingly the JAK‐STAT pathway is activated in meningeal leukocytes but few cells are observed in white and grey matter of the R and NR stages.
2.4. The JAK‐STAT pathway regulates the levels of expression of neurogenic genes during spinal cord regeneration
Our results suggested a strong correlation between changes in the spatio‐temporal activation of JAK‐STAT and the regenerative ability of X. laevis. To test the impact of the sustained activation of the JAK‐STAT pathway during spinal cord regeneration we prepared the transgenic line Tg(HS:caSTAT3GR) that allowed the regulated expression of a constitutively activated version of STAT3 (caSTAT3) (Fig. S5A), which was previously used in X. laevis to study STAT3 function in early development (Nichane et al., 2010). The temporal expression of the caSTAT3 construct can be tightly regulated by two mechanisms: (i) transcriptional control by the heat shock promoter and (ii) its nuclear translocation because it is fused to a glucocorticoid domain that allows nuclear translocation in response to the presence of dexamethasone.
For experiments an F0 founder carrying the transgene HS:caSTAT3GR was outcrossed to WT animals. The F1 offspring had a WT‐to‐transgenic ratio of 1:7 tadpoles, indicating that several copies of the construct were inserted in the F0 founder. Animals were raised to R stage, heat shocked and incubated with dexamethasone. Transgene expression was verified by RT‐qPCR and by western blot against STAT3‐GR (Fig. S5B, C). Activation of the JAK‐STAT pathway was verified by RT‐qPCR, where we observed an increase in socs3 of 14 times over WT animals (Fig. S5D). Activation of caSTAT3 for only 2 days resulted in a rapid loss of half of the animals making functional experiments in whole animals infeasible (Fig. S5E). Similar results were obtained when an F1 transgenic animal was outcrossed to WT animals. The F2 offspring had a WT‐to‐transgenic ratio of 1:2, suggesting that by Mendelian inheritance the offspring had only one or two copies of the transgene. Nevertheless, upon caSTAT3 activation the animals also had a low survival rate indicating that the copy number of the transgene was not the cause of mortality.
To overcome this problem, we developed spinal cord transplantation experiments to achieve localized caSTAT3 expression only in the spinal cord. For this a piece of the spinal cord of 1.5–2.0 μm was isolated from F2 Tg(HS:caSTAT3GR) tadpoles at R stage and transplanted into WT animals (Figs. 8A, S1D). For control similar transplantation experiments were done using the WT siblings of Tg(HS:caSTAT3GR) as donors. The animals received a first heat shock before the transplant and then a heat shock at days 2 and 4, were incubated with dexamethasone for 5 consecutive days, and then transplanted spinal cords were isolated for RT‐qPCR analysis (Fig. 8A). Using this approach we were able to induce sustained JAK‐STAT pathway activation in the Tg(HS:caSTAT3GR) spinal cord as verified by the significant increase of the mRNA levels of socs3 but also of c‐fosa and c‐myc (Fig. 8B), two other STAT3 direct targets (Bowman et al., 2001; Dauer et al., 2005; Lo et al., 2005; Yang, Lerner, Besser, & Darnell, 2003). Transplanted animals survived the treatments and the spinal cord grafts established rostrocaudal continuity with the host spinal cord (Fig. 8C); therefore this approach allowed us to induce a sustained induction of the JAK‐STAT pathway in a regenerative process similar to the previously characterized SCI providing an experimental setup to analyze the function of the JAK‐STAT pathway.
It has been demonstrated that the JAK‐STAT pathway modulates the maintenance of neural and progenitor stem cells (NSPC) (Hong & Song, 2015; Yoshimatsu et al., 2006) and gliogenic differentiation (Barnabé‐Heider et al., 2005; He et al., 2005) during nervous system development. Based on the finding that the JAK‐STAT pathway is activated in Sox2/3+ ependymal cells, on the facts that in R stage SCI activates the expression of the neurogenic genes neurogenin2, neurogenin3, and NeuroD, and that neurogenesis is probably necessary for spinal cord regeneration in R stage animals (Muñoz et al., 2015), we decided to test the effects of a sustained activation of this pathway on the expression of NSPC, glial and neurogenic markers. Regarding NSPC we evaluated the levels of the intermediate filaments Nestin and Vimentin and found that sustained activation of the JAK‐STAT pathway resulted in a significant increase in nestin mRNA, no change in vimentinA and a decrease in vimentinB (Fig. 8B).
Importantly, the mRNA levels for the neurogenic genes Neurogenin2a and 3 (Bertrand, Castro, & Guillemot, 2002) had a reduced expression when the activation in the spinal cord of the JAK‐STAT pathway was sustained (Fig. 8B). This seemed to be specific for neurogenic genes because the glial marker Aldh1l1 did not have a significant regulation (Fig. 8B). These results suggest that a tight regulation of the activation of the JAK‐STAT pathway is required for proper neurogenesis during spinal cord regeneration in R stage X. laevis.
3. DISCUSSION
In this study, we performed bioinformatics analysis of previous transcriptomic data to identify signaling pathways that were differentially regulated in response to SCI in the R and NR stages in X. laevis. The differential activation of the JAK‐STAT pathway was identified and followed by a detailed characterization of its activation and possible function. We found that in the R stage there is a rapid activation of the JAK‐STAT pathway at 3 hr post injury, mainly in Sox2/Sox3+ ependymal cells and neurons. This activation is transient; at 1−2 dpt it is already reduced and at 6 days after injury it returns to its basal levels. In NR stages the activation is also localized to Sox2/3+ cells and neurons, but the temporal profile is different to R stages. Its activation is slightly slower, occurs between 3 and 24 hr post injury, but more importantly the activation is sustained and lasts at least for 30 days. Sustained activation of the JAK‐STAT pathway in spinal cords overexpressing a caSTAT3 construct reduced the expression of neurogenic genes suggesting that neurogenesis can be disrupted when this pathway is maintained active for long periods of time.
3.1. JAK‐STAT pathway and early regenerative response
The early and transient activation of the JAK‐STAT pathway in regenerative tadpoles suggests a role of STAT3 in the early regenerative response. In mammals, STAT3 controls the maintenance of NSPCs in development and adult neurogenesis (Hong & Song, 2015; Müller, Chakrapani, Schwegler, Hofmann, & Kirsch, 2009; Yoshimatsu et al., 2006), and in a context of neural regeneration JAK‐STAT cytokines induce Müller glia proliferation and reprogramming in zebrafish retina (Zhao, Wan, Powell, Ramachandran, Myers, & Goldman, 2014). Here we show that STAT3 activation on Sox2/Sox3+ cells precedes transcriptome changes associated with the cell cycle (Lee‐Liu et al., 2014) and the proliferative response of Sox2/Sox3+ cells (Muñoz et al., 2015). In addition, we have shown that caSTAT3 induces the expression of c‐myc, which controls NSPC proliferation and differentiation (Kerosuo et al., 2008; Zinin et al., 2014), and nestin, which is necessary for NSPC maintenance (Park et al., 2010). Therefore, our results suggest that STAT3 is an early activator of Sox2/Sox3+ cell response in SCI, which is a necessary factor for R stage spinal cord regeneration (Muñoz et al., 2015).
Another possible mechanism regulated by the JAK‐STAT pathway could be reconnection of the severed spinal cord. Our previous study showed that, in R stage animals, ependymal‐like cells invade the ablation gap and then rostrocaudal continuity of the spinal cord is reestablished (Muñoz et al., 2015). This behavior is unique for regenerative models, as similar responses are observed in zebrafish and newts (Goldshmit, Sztal, jusuf, Hall, Nguyen‐Chi, & Currie, 2012; Muñoz et al., 2015; Zukor, Kent, & Odelberg, 2011) but not in X. laevis NR stages (Muñoz et al., 2015). We show that a massive increase of pSTAT3 levels occurs through the stump of regenerative tadpoles. In contrast, fewer pSTAT3+ cells are observed in the spinal cord stumps of NR stages. In addition, an intricate spatial pattern of activation is present in the ablation gap of the R stage, where pSTAT3+ cells surround Sox2/3+ cell clusters. The unique activation pattern of the R stage in the spinal cord stump and ablation gap suggests that early activation of the JAK‐STAT pathway controls the reestablishment of spinal cord continuity.
3.2. Activation of the JAK‐STAT pathway in neurons
Another possible mechanism for functional recovery after SCI that could be related to the JAK‐STAT pathway is axon regeneration. The regenerative stages of X. laevis are able to regenerate axons in response to SCI but this capacity is lost during metamorphosis (Gibbs et al., 2011). Conversely, STAT3 is a necessary factor for successful axon regeneration (Bareyre, Garzorz, Lang, Misgeld, Büning, & Kerschensteiner, 2011). We evaluated differences in the neuronal pSTAT3 levels to determine a relation between activation of the JAK‐STAT pathway and axon regeneration.
We used markers Islet1/2 to analyze motoneurons and sensory neurons, but we could not compare R and NR stages because Islet1/2+ motoneurons decrease in number and intensity signal during metamorphosis. In mice and chicken, Islet1 is highly expressed on motoneuron differentiation during spinal cord development, but then the expression decreases to a reduced mature motoneuron number (Kim, Park, Jeong, & Song, 2015; Kobayashi, Nakano, Atobe, Kadota, & Funakoshi, 2011). Therefore, we hypothesize that Islet1/2 marker led us to identify an immature pool of motoneurons in the R stage. In contrast, in the NR stages due to the scarce Islet1/2+ signal we recognized motoneurons by anatomical properties corresponding to motoneuron columns.
Here we show that both the R and NR56 stage have an early pSTAT3 increase in motoneurons and sensory neurons; therefore differences in the timing of activation could not be associated with these cells. Rather than timing, our results suggest that the difference between the immature/mature phenotype of pSTAT3+ motoneurons could be related to the loss of regenerative capacity. We can also conclude that, as metamorphosis advances, motoneurons lose the early response to the JAK‐STAT pathway as seen by the pSTAT3 levels in motoneuron columns observed at 3 hpt in NR56 stage but at 6 dpt in NR66 stage.
3.3. JAK‐STAT pathway in leukocytes
In mammals, the JAK‐STAT pathway is also activated in microglia and macrophages after SCI (Park et al., 2014; Yamauchi et al., 2006). In vitro studies have shown that STAT3 activated microglia induce the expression of inflammatory genes on astrocytes and neurons (Molet et al., 2015), while an enhanced STAT3 signaling in myeloid cells induces in vivo neuro‐inflammation (Qin et al., 2012). Nevertheless, in our model the sustained pSTAT3 signal in NR66 stage does not co‐localize with CD45+ leukocytes. This dismisses a relation between inflammatory response and sustained activation in the non‐regenerative response.
3.4. Sustained JAK‐STAT regeneration reduces neurogenesis
Our results indicate a correlation between loss of the regenerative capacity and the sustained activation of the JAK‐STAT pathway. To test if the timing of activation controls the response upon SCI, we developed a X. laevis transgenic line to induce a sustained JAK‐STAT pathway activation in the R stage. The Tg(HS:caSTAT3GR) induces pathway activation but has low survival rates after treatment, hampering the induction of a sustained activation in our established SCI model. To avoid the low survival rates we developed spinal cord grafting experiments, which have been done before in X. laevis tadpoles to study the role of the WNT signaling pathway in spinal cord regeneration using a similar heat shock inducible transgenic cassette (Lin, Chen, & Slack, 2012). The spinal cord graft establishes rostrocaudal continuity with the host spinal cord; therefore this approach allows us to induce a sustained induction of the JAK‐STAT pathway in a regenerative process similar to the previously characterized spinal cord transection.
We analyzed gene expression to determine if JAK‐STAT sustained activation controls neuronal precursor cell, glial or neuron lineage in response to injury. Our results showed no clear trend to neuronal precursor cell or glial regulation, but the two neurogenic genes neugenin2a and neurogenin3 were downregulated in response to sustained JAK‐STAT induction. Previously, we showed that these genes are upregulated in the R stage in response to SCI (Muñoz et al., 2015). Therefore our results suggest that transient activation of the pathway is necessary to allow neurogenic differentiation of Sox2/Sox3+ cells in the regenerative stage.
3.5. Sustained JAK‐STAT activation in the non‐regenerative response
STAT3 is a necessary factor for spinal cord recovery in mammals, as it promotes astrocyte response and glial scar formation, preventing secondary damage and worsening of the functional outcomes (Herrmann et al., 2008; Okada et al., 2006; Wanner et al., 2013). The JAK‐STAT pathway also has a sustained activation in mammals, as it is shown by pSTAT3+ astrocytes and oligodendrocyte precursor cells in the vicinity of the lesion core up to 4 months post‐injury (Hesp et al., 2015; Tripathi & McTigue, 2008). Our results suggest that activation of the JAK‐STAT pathway should be transient to allow regenerative neurogenesis. Taking this in account, a better understanding of the role of the JAK‐STAT pathway in the mammalian response for SCI should consider the timing of activation, because it is known that spinal cord ependymal cells in mammals are fated to glia and oligodendrocytes, whereas no neurogenesis is observed (Barnabé‐Heider et al., 2010; Meletis et al., 2008). Therefore, more studies should be done to determine if the JAK‐STAT pathway controls the fate of ependymal cells in mammals and to determine the efficient timing of activation of the pathway for spinal cord regeneration in mammals.
4. MATERIALS AND METHODS
4.1. Analysis of transcriptome‐wide database
A list of genes differentially expressed between the R and NR stages in response to SCI was obtained from Lee‐Liu et al. (2014). Genes were associated with a different signaling pathway with the option “Reconstruct pathway” from the KEGG database (Kanehisa, Goto, Kawashima, Okuno, & Hattori, 2004). Genes associated with the JAK‐STAT pathway were hierarchically clustered according to their log2(fold change) value and represented graphically using Cluster3.0 and Java Tree View (de Hoon, Imoto, Nolan, & Miyano, 2004; Saldanha, 2004).
4.2. Growth and manipulation of Xenopus laevis
Frogs obtained from Nasco (Fort Atkinson, WI, USA) were subjected to in vitro fertilization and raised as described previously (Gaete et al., 2012) until they achieved Nieuwkoop and Faber stage 50 (R stage), 56 or 66 (NR56 and NR66 stages). For spinal cord manipulations, tadpoles and froglets were anesthetized in 0.1% MS222 and placed on an inverted Petri dish covered by gauze. Spinal cord transection and postoperative manipulation were executed as previously described (Lee‐Liu et al., 2014; Muñoz et al., 2015, Edwards‐Faret, Muñoz, Mendez‐Olivos, Lee‐Liu, Tapia, & Larrain, 2016). Briefly, dorsal tissue was incised at the midpoint of the thoracic segment, and then the spinal cord was transversally sectioned (transection) at the midpoint between forelimbs and hindlimbs (Fig. S1A−C). In the post‐metamorphic NR66 stage, the spinal cord was accessed through the intervertebral discs of the ossified vertebrae to perform the transection. For control in all procedures, a sham operation was performed cutting only skin and muscle dorsal tissue (Edwards‐Faret et al., 2016). All animal procedures were approved by the Committee on Bioethics and Biosafety from the Faculty of Biological Sciences, Pontificia Universidad Catolica de Chile.
4.3. Spinal cord isolation
To isolate spinal cords, transected or sham‐operated animals at the R and NR stages were sacrificed at 3 or 6 hr post‐transection (hpt) and 1, 2, 6, 15, or 30 days post‐transection (dpt). We isolated samples as described previously (Lee‐Liu et al., 2014; Fig. S1A−C) for the R and NR66 stages. For the NR56 stage, the isolated spinal cord segment went from the transection site to the cloaca and was 3.8 mm long (Fig. S1B).
For RT‐qPCR replicates we isolated spinal cords from pools of 12−15 tadpoles at the R stage, 8−10 tadpoles at the NR56 stage and three froglets at the NR66 stage, while western blot samples included 8−10 tadpoles at the R stage, four to five tadpoles at the NR56 stage and three froglets at the NR66 stage.
4.4. RT‐qPCR
Total RNA was obtained as described previously (Lee‐Liu et al., 2014), to give a total of at least three biological replicates. cDNA was synthesized using M‐MLV reverse transcriptase (Promega, Madison, WI, USA), and qPCR was performed using Maxima SYBR Green (Thermo Scientific, Waltham, MA, USA). The relative expression ratio (Pfaffl, 2001) was then calculated using eef1a1 (GenBank BC043843) as a reference gene and comparing to sham operated levels. The primers used in this study are indicated in Table S1.
4.5. Western blot
Spinal cords were homogenized in RIPA lysis buffer with protease inhibitors (benzamidine 1 μM; leupeptin 5 μg/ml; Na3VO4 200 μM; sodium pyrophosphate 200 μM and phenylmethylsulfonyl fluoride 200 μM). Western blot was performed as described previously (Gaete et al., 2012; Muñoz et al., 2015); proteins were quantified with the bicinchoninic acid protein assay kit (Thermo Scientific) and 10 μg of protein was loaded in each lane. The primary antibodies used were rabbit monoclonal antibody (mAb) anti‐pSTAT3 (1:2000; Cell Signaling Technology, Danvers, MA, USA; D3A7) and rabbit polyclonal anti‐STAT3 (1:1000; Santa Cruz Biotechnology, Dallas, TX, USA; sc‐482). Densitometry analysis of pSTAT3 and STAT3β bands was performed with ImageJ (National Institutes of Health, Bethesda, MD, USA) and in each experiment the pSTAT3/STAT3 ratio was normalized to the sham or uncut control.
4.6. Immunofluorescence
Tissue processing and immunofluorescence was performed as described by Muñoz et al. (2015) with minor modifications. Briefly, spinal cord cryosections were permeabilized with 100% methanol at −20°C for 10 min and then with phosphate‐buffered saline (PBS) + 0.2% Triton X‐100 (PBST) at room temperature for 10 min, blocked in PBST + 10% goat serum, incubated with primary antibodies overnight at 4°C, secondary antibodies for 2 hr at room temperature and stained with TOTO‐3 or Hoechst 33342. Antibodies used were rabbit mAb anti‐pSTAT3 (1:200, Cell Signaling Technology, D3A7), mouse mAb anti‐Sox2 (1:200, Cell Signaling Technology, L1D6A2), mouse mAb anti‐Islet1/2 (1:50; Developmental Studies Hybridoma Bank, Iowa City, IA, USA; 39.4D5), mouse mAb anti‐CD45 (1:50; Xenopus laevis Resource for Immunobiology, Rochester, NY, USA; CL21) and AlexaFluor 488 or 555 (1:500; Invitrogen, Carlsbad, CA, USA) as secondary antibodies.
Samples were photographed using an inverted fluorescence microscope (Microfluo Olympus IX71) or a confocal microscope (FV‐1000 Olympus Confocal Laser Scanning Microscope). Total cell counts for quantification analysis were determined using the ImageJ cell counter plugin.
4.7. Transgene constructs and transgenesis
We generated a construct using the HGEM vector (Beck, Christen, & Slack, 2003), which contains a Xenopus HSP70 promoter to induce expression of a gene of interest and the Xenopus γ‐crystallin promoter driving expression of green fluorescent protein (GFP) as a visible marker for transgene insertion. The transgene sequence was obtained from a pCS2‐caSTAT3GR (Nichane, Ren, & Bellefroid, 2010). The caSTAT3GR‐polyA fragment was digested from this construct with HindIII and BssHII and then cloned into the HGEM vector.
The HGEM‐caSTAT3GR construct was used to generate the transgenic line Xla.Tg(cryga:GFP,hsp70:CAstat3‐GR)Larra, named following the working guidelines for naming Xenopus transgenics and simplified as Tg(HS:caSTAT3GR). Transgenesis was adapted from the restriction enzyme mediated integration method (Ishibashi, Kroll, & Amaya, 2009). Transgenic embryos were selected by GFP+ eyes and raised until sexual maturity.
An F0 male frog 7 months old was used to generate F1 tadpoles through natural mating. Once tadpoles reached the R stage, they were heat shocked (30 min at 34°C) once and incubated in 0.1× Barth with 10 μM dexamethasone to characterize survival rate and JAK‐STAT activation in the central nervous system (brain and spinal cord) by RT‐qPCR and western blot. Lastly, F2 tadpoles were generated for transplantation experiments.
4.8. Spinal cord transplantation
For spinal cord transplantation (Fig. S1D), the dorsal tissue of a wild‐type (WT) tadpole was longitudinally incised to expose the spinal cord. The incision was made from the midpoint between forelimbs and hindlimbs to the hindlimbs level. The exposed spinal cord was cross‐sectioned using iridectomy scissors at both ends and then removed. The 1.5–2.0 μm donor spinal cord piece was inserted into a WT tadpole, and then tadpoles were kept in 01× Barth supplemented with antibiotics and dexamethasone 10 μM, and fed every 2 days. The first heat shock was induced in the donor tadpoles 30 min before spinal cord transplantation; two other heat shocks were induced at day 2 and 4 in the host tadpoles. At day 5 the host tadpoles were sacrificed and the transplanted spinal cord was isolated again for RT‐qPCR analysis. Five replicates for RT‐qPCR were prepared from pools of 8−12 control and transgenic transplanted tadpoles.
4.9. Statistical analysis
Results for RT‐qPCR were analyzed by one simple t‐test with 95% confidence to determine a significant difference with sham levels (value 0). Results for RT‐qPCR, western blot and cell counting were analyzed by one‐way ANOVA and the Bonferroni test with multiple comparisons to compare between time points. For one‐way ANOVA test differences were considered statistically significant at *P < 0.05, **P < 0.01, ***P < 0.001, and ****P < 0.0001 for at least three independent experiments. Error bars in all figures indicate the standard error of the mean.
5. Conclusion
We demonstrated that spatio‐temporal changes in activation of the JAK‐STAT pathway are associated with loss of the regenerative capacity in X. laevis, leading to a more comprehensive characterization of the molecular and cellular differences between R and NR stage SCI. Although further studies should clarify the role of early activation on Sox2/3+ cells in the regenerative response, our results suggest that transient timing of activation is necessary to allow regenerative neurogenesis. Altogether these results provide novel insights on the role of the JAK‐STAT pathway function in SCI, which is known to be necessary for spinal cord recovery in mammals but where no study has assessed an efficient temporal activation of the pathway for spinal cord recovery.
Supporting information
Acknowledgments
Special thanks to Dasfne Lee‐Liu and Emilio Mendez for critical reading of the manuscript. We are also grateful for the kind gift of mAb anti‐CD45 from Dr Jacques Robert (Xenopus laevis Resource for Immunobiology) and the pCS2‐caSTAT3‐GR construct from Dr Eric Bellefroid. This work was funded by the research grants FONDECYT No. 1141162, ICGEB (CRP/CHI‐13‐01), ICM No. P07‐011‐F and Basal funding PFB12/2007.
Tapia VS, Herrera‐Rojas M, Larrain J. JAK‐STAT pathway activation in response to spinal cord injury in regenerative and non‐regenerative stages of Xenopus laevis . Regeneration. 2017;4:21–35. https://doi.org/10.1002/reg2.74
Conflict of interest statement: The authors have no conflict of interest to declare.
Author contribution: VST performed most of the experiments. MHR helped with RT‐qPCR analyses. VST and JL designed experiments and wrote the paper.
References
- Anderson, M. A. , Burda, J. E. , Ren, Y. , Ao, Y. , O'Shea, T. M. , Kawaguchi, R. , …, & Sofroniew, M. V. (2016). Astrocyte scar formation aids central nervous system axon regeneration. Nature, 532(7598), 195–200. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Bareyre, F. M. , Garzorz, N. , Lang, C. , Misgeld, T. , Büning, H. , & Kerschensteiner, M. (2011). In vivo imaging reveals a phase‐specific role of STAT3 during central and peripheral nervous system axon regeneration. Proceedings of the National Academy of Sciences of the United States of America, 108(15), 6282–6287. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Barnabé‐Heider, F. , Göritz, C. , Sabelström, H. , Takebayashi, H. , Pfrieger, F.W. , Meletis, K. , & Frisén, J. (2010). Origin of new glial cells in intact and injured adult spinal cord. Cell Stem Cell, 7(4), 470–482. [DOI] [PubMed] [Google Scholar]
- Barnabé‐Heider, F. , Wasylnka, J. A. , Fernandes, K. J. L. , Porsche, C. , Sendtner, M. , Kaplan, D. R. , & Miller, F. D. (2005). Evidence that embryonic neurons regulate the onset of cortical gliogenesis via cardiotrophin‐1. Neuron, 48(2), 253–265. [DOI] [PubMed] [Google Scholar]
- Barritt, L. , & Turpen, J. B. (1995). Characterization of lineage restricted forms of a Xenopus CD45 homologue. Developmental & Comparative Immunology, 19(6), 525–536. [DOI] [PubMed] [Google Scholar]
- Beattie, M. S. , Bresnahan, J. C. , & Lopate, G. (1990). Metamorphosis alters the response to spinal cord transection in Xenopus laevis frogs. Journal of Neurobiology, 21(7), 1108–1122. [DOI] [PubMed] [Google Scholar]
- Beck, C. W. , Christen, B. , & Slack, J. M. W. (2003). Molecular pathways needed for regeneration of spinal cord and muscle in a vertebrate. Developmental Cell, 5(3), 429–439. [DOI] [PubMed] [Google Scholar]
- Becker, C. G. , & Becker, T. (2015). Neuronal regeneration from ependymo‐radial glial cells: Cook, little pot, cook! Developmental Cell, 32(4), 516‐527. [DOI] [PubMed] [Google Scholar]
- Becker, T. , Wullimann, M. F. , Becker, C. G. , Bernhardt, R. R. , & Schachner, M. (1997). Axonal regrowth after spinal cord transection in adult zebrafish. Journal of Comparative Neurology, 377(4), 577–595. [DOI] [PubMed] [Google Scholar]
- Bertrand, N. , Castro, D. S. , & Guillemot, F. (2002). Proneural genes and the specification of neural cell types. Nature Reviews. Neuroscience, 3(7), 517–530. [DOI] [PubMed] [Google Scholar]
- Bowman, T. , Broome, M. A , Sinibaldi, D. , Wharton, W. , Pledger, W. J. , Sedivy, J. M. , …, & Jove, R. (2001). Stat3‐mediated Myc expression is required for Src transformation and PDGF‐induced mitogenesis. Proceedings of the National Academy of Sciences of the United States of America, 98(13), 7319–7324. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Cannon, B. (2013). Sensation and loss. Nature, 503(7475), S2–3. [DOI] [PubMed] [Google Scholar]
- Clarke, J. D. W. , Alexander, R. , & Holder, N. (1988). Regeneration of descending axons in the spinal cord of the axolotl. Neuroscience Letters, 89(1), 1–6. [DOI] [PubMed] [Google Scholar]
- Dauer, D. J. , Ferraro, B. , Song, L. , Yu, B. , Mora, L. , Buettner, R. , …, & Haura, E. B. (2005). Stat3 regulates genes common to both wound healing and cancer. Oncogene, 24(21), 3397–3408. [DOI] [PubMed] [Google Scholar]
- de Hoon, M. J. L. , Imoto, S. , Nolan, J. , & Miyano, S. (2004). Open source clustering software. Bioinformatics, 20(9), 1453–1454. [DOI] [PubMed] [Google Scholar]
- Diaz‐Quiroz, J. F. , & Echeverri, K. (2013). Spinal cord regeneration: where fish, frogs and salamanders lead the way, can we follow? The Biochemical Journal, 451(3), 353–364. [DOI] [PubMed] [Google Scholar]
- Edwards‐Faret, G. , Muñoz, R. , Méndez‐Olivos, E. , Lee‐Liu, D. , Tapia, V. S. , & Larraín, J. (2017) Spinal cord regeneration in Xenopus laevis . Nature Protocols, 12, 372–390. [DOI] [PubMed] [Google Scholar]
- Filoni, S. , Bosco, L. , & Cioni, C. (1984). Reconstitution of the spinal cord after ablation in larval Xenopus laevis . Acta Embryologiae et Morphologiae Experimentalis, 5, 109–219. [PubMed] [Google Scholar]
- Gaete, M. , Muñoz, R. , Sánchez, N. , Tampe, R. , Moreno, M. , Contreras, E. G. , …, & Larraín, J. (2012). Spinal cord regeneration in Xenopus tadpoles proceeds through activation of Sox2‐positive cells. Neural Development, 7(13), 1–17. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gibbs, K. M. , Chittur, S. V , & Szaro, B. G. (2011). Metamorphosis and the regenerative capacity of spinal cord axons in Xenopus laevis . The European Journal of Neuroscience, 33(1), 9–25. [DOI] [PubMed] [Google Scholar]
- Goldshmit, Y. , Sztal, T. E. , Jusuf, P. R. , Hall, T. E. , Nguyen‐Chi, M. , & Currie, P. D. (2012). Fgf‐dependent glial cell bridges facilitate spinal cord regeneration in zebrafish. The Journal of Neuroscience, 32(22), 7477–7492. [DOI] [PMC free article] [PubMed] [Google Scholar]
- He, F. , Ge, W. , Martinowich, K. , Becker‐Catania, S. , Coskun, V. , Zhu, W. , …, & Sun, Y. E. (2005). A positive autoregulatory loop of Jak‐STAT signaling controls the onset of astrogliogenesis. Nature Neuroscience, 8(5), 616–625. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Herrmann, J. E. , Imura, T. , Song, B. , Qi, J. , Ao, Y. , Nguyen, T. K. , …, & Sofroniew, M. V. (2008). STAT3 is a critical regulator of astrogliosis and scar formation after spinal cord injury. The Journal of Neuroscience, 28(28), 7231–7243. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hesp, Z. C. , Goldstein, E. Z. , Goldstein, E. A. , Miranda, C. J. , Kaspar, B. K. , & McTigue, D. M. (2015). Chronic oligodendrogenesis and remyelination after spinal cord injury in mice and rats. The Journal of Neuroscience, 35(3), 1274–1290. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hong, S. , & Song, M. R. (2015). Signal transducer and activator of transcription‐3 maintains the stemness of radial glia at mid‐neurogenesis. The Journal of Neuroscience, 35(3), 1011–1023. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Huang, Y. , Qiu, J. , Dong, S. , Redell, M. S. , Poli, V. , Mancini, M. A. , & Tweardy, D. J. (2007). Stat3 isoforms, α and β, demonstrate distinct intracellular dynamics with prolonged nuclear retention of Stat3β mapping to its unique C‐terminal end. Journal of Biological Chemistry, 282(48), 34958–34967. [DOI] [PubMed] [Google Scholar]
- Ishibashi, S. , Kroll, K. L. , & Amaya, E. (2009). A method for generating transgenic frog embryos In Sharpe P. T. & Mason I., Molecular Embryology: Methods and Protocols, (2nd edition, pp. 447–466). Totowa, NJ, USA: Humana Press. [Google Scholar]
- Jin, D. , Liu, Y. , Sun, F. , Wang, X. , Liu, X. , & He, Z. (2015). Restoration of skilled locomotion by sprouting corticospinal axons induced by co‐deletion of PTEN and SOCS3. Nature Communications, 6, 8074. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kanehisa, M. , Goto, S. , Kawashima, S. , Okuno, Y. , & Hattori, M. (2004). The KEGG resource for deciphering the genome. Nucleic Acids Research, 32(Database issue), D277–80. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kerosuo, L. , Piltti, K. , Fox, H. , Angers‐Loustau, A. , Hayry, V. , Eilers, M. , …, & Wartiovaara, K. (2008). Myc increases self‐renewal in neural progenitor cells through Miz‐1. Journal of Cell Science, 121(23), 3941–3950. [DOI] [PubMed] [Google Scholar]
- Kim, N. , Park, C. , Jeong, Y. , & Song, M. R. (2015). Functional diversification of motor neuron‐specific Isl1 enhancers during evolution. PLoS Genetics, 11(10), e1005560. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kisseleva, T. , Bhattacharya, S. , Braunstein, J. , & Schindler, C. W. (2002). Signaling through the JAK/STAT pathway, recent advances and future challenges. Gene, 285(1‐2), 1–24. [DOI] [PubMed] [Google Scholar]
- Kobayashi, M. , Nakano, M. , Atobe, Y. , Kadota, T. , & Funakoshi, K. (2011). Islet‐1 expression in thoracic spinal motor neurons in prenatal mouse. International Journal of Developmental Neuroscience, 29(7), 749–756. [DOI] [PubMed] [Google Scholar]
- Lang, C. , Bradley, P. M. , Jacobi, A. , Kerschensteiner, M. , & Bareyre, F. M. (2013). STAT3 promotes corticospinal remodelling and functional recovery after spinal cord injury. EMBO Reports, 14(10), 931–937. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lee, B. B. , Cripps, R. A. , Fitzharris, M. , & Wing, P. C. (2014). The global map for traumatic spinal cord injury epidemiology: update 2011, global incidence rate. Spinal Cord, 52(2), 110–116. [DOI] [PubMed] [Google Scholar]
- Lee‐Liu, D. , Edwards‐Faret, G. , Tapia, V. S. , & Larraín, J. (2013). Spinal cord regeneration: lessons for mammals from non‐mammalian vertebrates. Genesis, 51(8), 529–544. [DOI] [PubMed] [Google Scholar]
- Lee‐Liu, D. , Moreno, M. , Almonacid, L. I. , Tapia, V. S. , Muñoz, R. , Von Marées, J. , …, & Larraín, J. (2014). Genome‐wide expression profile of the response to spinal cord injury in Xenopus laevis reveals extensive differences between regenerative and non‐regenerative stages. Neural Development, 9(1), 12. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lee‐Liu, D. , Méndez‐Olivos, E. E. , Muñoz, R. , & Larraín, J. (2016). The African clawed frog Xenopus laevis: a model organism to study regeneration of the central nervous system. Neuroscience Letters, doi: 10.1016/j.neulet.2016.09.054. [Epub ahead of print] [DOI] [PubMed] [Google Scholar]
- Lin, G. , Chen, Y. , & Slack, J. M. W. (2012). Transgenic analysis of signaling pathways required for Xenopus tadpole spinal cord and muscle regeneration. Anatomical Record (Hoboken), 295(10), 1532–1540. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Lo, H. W. , Hsu, S. C. , Ali‐Seyed, M. , Gunduz, M. , Xia, W. , Wei, Y. , …, & Hung, M. C. (2005). Nuclear interaction of EGFR and STAT3 in the activation of the iNOS/NO pathway. Cancer Cell, 7(6), 575–589. [DOI] [PubMed] [Google Scholar]
- Maritano, D. , Sugrue, M. L. , Tininini, S. , Dewilde, S. , Strobl, B. , Fu, X. , …, & Poli, V. (2004). The STAT3 isoforms alpha and beta have unique and specific functions. Nature Immunology, 5(4), 401–409. [DOI] [PubMed] [Google Scholar]
- Meletis, K. , Barnabé‐Heider, F. , Carlén, M. , Evergren, E. , Tomilin, N. , Shupliakov, O. , & Frisén, J. (2008). Spinal cord injury reveals multilineage differentiation of ependymal cells. PLoS Biology, 6(7), e182. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mertens, C. , & Darnell, J. E. (2007). SnapShot: JAK‐STAT signaling. Cell, 131(3), 612. [DOI] [PubMed] [Google Scholar]
- Molet, J. , Mauborgne, A. , Diallo, M. , Armand, V. , Geny, D. , Villanueva, L. , …, & Pohl, M. (2015). Microglial Janus kinase/signal transduction and activator of transcription 3 pathway activity directly impacts astrocyte and spinal neuron characteristics. Journal of Neurochemistry, 136(1), 133–147. [DOI] [PubMed] [Google Scholar]
- Müller, S. , Chakrapani, B. P. S. , Schwegler, H. , Hofmann, H. D. , & Kirsch, M. (2009). Neurogenesis in the dentate gyrus depends on ciliary neurotrophic factor and signal transducer and activator of transcription 3 signaling. Stem Cells, 27(2), 431–41. [DOI] [PubMed] [Google Scholar]
- Muñoz, R. , Edwards‐Faret, G. , Moreno, M. , Zuñiga, N. , Cline, H. , & Larraín, J. (2015). Regeneration of Xenopus laevis spinal cord requires Sox2/3 expressing cells. Developmental Biology, 408(2), 229–243. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Nichane, M. , Ren, X. , & Bellefroid, E. J. (2010). Self‐regulation of Stat3 activity coordinates cell‐cycle progression and neural crest specification. The EMBO Journal, 29(1), 55–67. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Okada, S. , Nakamura, M. , Katoh, H. , Miyao, T. , Shimazaki, T. , Ishii, K. , …, & Okano, H. (2006). Conditional ablation of Stat3 or Socs3 discloses a dual role for reactive astrocytes after spinal cord injury. Nature Medicine, 12(7), 829–834. [DOI] [PubMed] [Google Scholar]
- Park, D. , Xiang, A. P. , Mao, F. F. , Zhang, L. , Di, C. G. , Liu, X. M. , …, & Lahn, B. T. (2010). Nestin is required for the proper self‐renewal of neural stem cells. Stem Cells, 28(12), 2162–2171. [DOI] [PubMed] [Google Scholar]
- Park, K. , Lin, C. , & Lee, Y. (2014). Expression of Suppressor of Cytokine Signaling‐3 (SOCS3) and its role in neuronal death after complete spinal cord injury. Experimental Neurology, 261, 65–75. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Pfaffl, M. W. (2001). A new mathematical model for relative quantification in real‐time RT‐PCR. Nucleic Acids Research, 29(9), e45. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Pineau, I. , & Lacroix, S. (2007). Proinflammatory cytokine synthesis in the injured mouse spinal cord: multiphasic expression pattern and identification of the cell types involved. Journal of Comparative Neurology, 500(2), 267–285. [DOI] [PubMed] [Google Scholar]
- Qin, H. , Yeh, W. , De Sarno, P. , Holdbrooks, A. , Liu, Y. , Muldowney, M. , …, & Benveniste, E. N. (2012). Signal transducer and activator of transcription‐3/suppressor of cytokine signaling‐3 (STAT3/SOCS3) axis in myeloid cells regulates neuroinflammation. Proceedings of the National Academy of Sciences of the United States of America, 109(13), 5004–5009. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Saldanha, A. J. (2004). Java treeview‐extensible visualization of microarray data. Bioinformatics, 20(17), 3246–3248. [DOI] [PubMed] [Google Scholar]
- Slaets, H. , Nelissen, S. , Janssens, K. , Vidal, P. M. , Lemmens, E. , Stinissen, P. , …, & Hellings, N. (2014). Oncostatin M reduces lesion size and promotes functional recovery and neurite outgrowth after spinal cord injury. Molecular Neurobiology, 50(3), 1142–1151. [DOI] [PubMed] [Google Scholar]
- Tanaka, E. M. , & Ferretti, P. (2009). Considering the evolution of regeneration in the central nervous system. Nature Reviews. Neuroscience, 10(10), 713–723. [DOI] [PubMed] [Google Scholar]
- Thuret, S. , Moon, L. D. F. , & Gage, F. H. (2006). Therapeutic interventions after spinal cord injury. Nature Reviews. Neuroscience, 7(8), 628–643. [DOI] [PubMed] [Google Scholar]
- Tripathi, R. B. , & McTigue, D. M. (2008). Chronically increased ciliary neurotrophic factor and fibroblast growth factor‐2 expression after spinal contusion in rats. Journal of Comparative Neurology, 510(2), 129–144. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Uemura, O. , Okada, Y. , Ando, H. , Guedj, M. , Higashijima, S. I. , Shimazaki, T. , …, & Okamoto, H. (2005). Comparative functional genomics revealed conservation and diversification of three enhancers of the isl1 gene for motor and sensory neuron‐specific expression. Developmental Biology, 278(2), 587–606. [DOI] [PubMed] [Google Scholar]
- Wanner, I. B. , Anderson, M. A. , Song, B. , Levine, J. , Fernandez, A. , Gray‐Thompson, Z. , …, & Sofroniew, M. V. (2013). Glial scar borders are formed by newly proliferated, elongated astrocytes that interact to corral inflammatory and fibrotic cells via STAT3‐dependent mechanisms after spinal cord injury. Journal of Neuroscience, 33(31), 12870–12886. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yamauchi, K. , Osuka, K. , Takayasu, M. , Usuda, N. , Nakazawa, A. , Nakahara, N. , …, & Yoshida, J. (2006). Activation of JAK/STAT signalling in neurons following spinal cord injury in mice. Journal of Neurochemistry, 96(4), 1060–1070. [DOI] [PubMed] [Google Scholar]
- Yang, E. , Lerner, L. , Besser, D. , & Darnell, J. E. (2003). Independent and cooperative activation of chromosomal c‐fos promoter by STAT3. Journal of Biological Chemistry, 278(18), 15794–15799. [DOI] [PubMed] [Google Scholar]
- Yoshimatsu, T. , Kawaguchi, D. , Oishi, K. , Takeda, K. , Akira, S. , Masuyama, N. , & Gotoh, Y. (2006). Non‐cell‐autonomous action of STAT3 in maintenance of neural precursor cells in the mouse neocortex. Development, 133(13), 2553–2563. [DOI] [PubMed] [Google Scholar]
- Zhao, X. F. , Wan, J. , Powell, C. , Ramachandran, R. , Myers, M. G. , & Goldman, D. (2014). Leptin and IL‐6 family cytokines synergize to stimulate Müller glia reprogramming and retina regeneration. Cell Reports, 9(1), 272–284. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Zinin, N. , Adameyko, I. , Wilhelm, M. , Fritz, N. , Uhlén, P. , Ernfors, P. , & Henriksson, M. A. (2014). MYC proteins promote neuronal differentiation by controlling the mode of progenitor cell division. EMBO Reports, 15(4), 383–391. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Zukor, K. A. , Kent, D. T. , & Odelberg, S. J. (2011). Meningeal cells and glia establish a permissive environment for axon regeneration after spinal cord injury in newts. Neural Development, 6, 1. [DOI] [PMC free article] [PubMed] [Google Scholar]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.