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. 2017 Jan 5;19(2):348–351. doi: 10.1021/acs.orglett.6b03528

Porphyrin–Polyyne [3]- and [5]Rotaxanes

Daniel R Kohn 1, Levon D Movsisyan 1, Amber L Thompson 1, Harry L Anderson 1,*
PMCID: PMC5354311  PMID: 28054784

Abstract

graphic file with name ol-2016-03528d_0005.jpg

Porphyrin–polyyne [3]- and [5]rotaxanes have been synthesized by condensing aldehyde–rotaxanes with pyrrole or dipyrromethane. The crystal structure of a [3]rotaxane shows that the macrocycles adopt compact conformations, holding the hexaynes near the porphyrin core, and that the phenanthroline units form intermolecular π-stacked dimers in the solid. Fluorescence spectra reveal singlet excited-state energy transfer from the threaded hexayne to the porphyrin, from the phenanthroline to the porphyrin, and from the phenanthroline to the hexayne.


Macrocycles consisting entirely of sp-hydridized carbon are intriguing synthetic targets.13 Cyclocarbons have been studied in the gas phase,1,2,4 but they have not yet been isolated or characterized in solution, despite attempts by Diederich, Tobe, Rees, and co-workers.13 Advances in active metal template synthesis5 provide access to an expanding diversity of interlocked molecules, including threaded polyynes,611 and it has been found that linear chains of sp-hybridized carbon atoms (both polyynes and cumulenes) can be stabilized by threading them through macrocycles to form rotaxanes.1113 As part of a project directed toward the synthesis of cyclocarbon catenanes, we are exploring strategies for positioning several polyyne rotaxane units around a central molecular hub, so that the polyynes can then be linked together to form a threaded cyclocarbon. Here, we present the first step in this endeavor: the synthesis of a [5]rotaxane in which four hexaynes are positioned around a porphyrin core. While the primary motivation for this work was to explore approaches to cyclocarbon catenanes, this study also provides insights into the interactions between the singlet excited states of polyyne and porphyrin chromophores.

The initial target of this work was the porphyrin [5]rotaxane P5Ra shown in Figure 1. All attempts at the synthesis of this [5]rotaxane failed, presumably as a consequence of the steric bulk of the four [2]rotaxane substituents. However, we successfully synthesized the analogous porphyrin [5]rotaxane P5Rb with p-phenylene spacers at the meso-positions and the corresponding porphyrin [3]rotaxanes P3Ra and P3Rb (Scheme 1). Here, we present the synthesis of these rotaxanes and an analysis of their fluorescence behavior, together with the crystal structure of a porphyrin [3]rotaxane P3Ra. This structure shows that the macrocycles adopt compact conformations due to the predominantly gauche geometries of the O–CH2CH2–O links, which increases the effective steric bulk of the rotaxane substituents and explains why the [5]rotaxane P5Ra could not be synthesized.

Figure 1.

Figure 1

Structure of target [5]rotaxane P5Ra.

Scheme 1. Polyrotaxane and Porphyrin Synthesis.

Scheme 1

Porphyrins PM4a, PM2a, P3Ra, P5Ra, PM4b, PM2b, P3Rb, and P5Rb were isolated as zinc complexes after treatment with Zn(OAc)2·2H2O in methanol/chloroform.

Our synthetic approach starts with the macrocyclic aldehyde Ma (Scheme 1).14,15 Active metal template Cadiot–Chodkiewicz coupling7,11 of supertrityl triyne Tr*C6H and bromotriyne Tr*C6Br [where Tr* is tris(3,5-di-tert-butylphenyl)methyl16] in the presence of the copper(I) complex of Ma gave the [2]rotaxane aldehyde 2Ra in 58% yield. A wide variety of conditions were tested for the reaction of 2Ra with pyrrole in attempts to prepare P5Ra, but they all failed to give even a trace of this target [5]rotaxane, whereas control reactions of aldehyde Ma produced porphyrin PM4a in good yield. In contrast, reaction of the rotaxane aldehyde 2Ra with dipyrromethane gave the porphyrin [3]rotaxane P3Ra in 62% yield. These results imply that formation of P5Ra is blocked by the steric bulk of the rotaxane units, so we investigated the analogous compounds derived from macrocycle Mb, which has a p-phenylene spacer between the aldehyde functionality and the macrocycle. Increasing the distance between the bulky rotaxane unit and the porphyrin hub made it possible to synthesize [5]rotaxane P5Rb (10% yield isolated).

The porphyrin [3]- and [5]rotaxanes, and reference porphyrins, were fully characterized as their zinc complexes Zn–P3Ra, Zn–P3Rb, Zn–P5Rb, Zn–PM2a, Zn–PM4a, Zn–PM2b, and Zn–PM4b (see the Supporting Information). Crystals of Zn–P3Ra were grown by diffusion of methanol vapor into a solution in chloroform and analyzed by single-crystal X-ray diffraction.17 The crystal structure has two molecules of Zn–P3Ra in the asymmetric unit; both rotaxane molecules have similar conformations with methanol coordinated to the zinc centers. The phenanthroline units of each rotaxane form intermolecular π-stacked dimers with crystallographically equivalent rotaxanes, forming infinite strands of interactions, as illustrated in Figure 2. The oligoethylene glycol chains of the macrocycles adopt compact conformations and are mostly gauche (O–CH2CH2–O torsional angle 40–80°) with the polyyne chains held close to the porphyrin units. Thus, all four polyyne chains in the asymmetric unit make van der Waals contacts with the β-pyrrole protons of the porphyrins (sp-C···H distance: 2.9–3.1 Å). The hexayne chains have slightly curved geometries, similar to those reported in crystal structures of other polyynes.9,11,16,1820

Figure 2.

Figure 2

Projection of the structure of the [3]rotaxane Zn–P3Ra from X-ray crystallography. This figure only shows one of the two molecules in the asymmetric unit.

The family of rotaxanes synthesized during this study provides a unique opportunity to investigate photophysical interactions between the excited states of polyyne and porphyrin chromophores. The photophysical behavior of polyynes is particularly interesting because their absorption spectra are dominated by strong transitions to higher excited states at 280–320 nm (S0–Sn, ε ≈ 3 × 105 M–1 cm–1); absorption into the first excited state is dipole-forbidden and can occasionally be observed as a very weak band at 350–450 nm (S0–S1, ε ≈ 500 M–1 cm–1).16,18 Polyynes also exhibit remarkably fast intersystem crossing (S1–T1), which usually prevents observation of fluorescence.

The absorption spectra of rotaxanes Zn–P3Ra, Zn–P3Rb, and Zn–P5Rb demonstrate that threading causes very little perturbation to the electronic structure of the component chromophores. Thus, the absorption bands of the polyyne (280–320 nm), the phenanthroline macrocycle (250–380 nm), and porphyrin (400–450 nm Soret band and 530–560 nm Q-band) are readily identified in the rotaxanes. Comparison with simple reference porphyrin derivatives (meso-tetraphenyl porphyrin for Zn–P5Rb and Zn–PM4a; 5,15-diaryl porphyrin for Zn–P3Ra, Zn–P3Rb, Zn–PM2a, and Zn–PM2b) shows that the polyyne and phenanthroline macrocycle units have no effect on the fluorescence quantum yield, measured on excitation of the porphyrin Soret band at around 415 nm. This demonstrates that there is no significant energy migration from the porphyrin to the polyyne or to the macrocycle.

Fluorescence excitation spectra of the rotaxanes, measured by recording emission from the porphyrin Q-band at around 640 nm, show clear features from excitation into the polyyne and phenanthroline macrocycle components, as illustrated for Zn–P3Ra and Zn–PM2a in Figure 3, indicating that both of these chromophores transfer energy to the porphyrin. A detailed examination of the absorption spectra, fluorescence spectra, and excitation spectra of the whole family of compounds allowed us to determine the quantum yields of excited-state energy transfer (EET) from the polyyne to the porphyrin and from the phenanthroline macrocycle to the porphyrin as summarized in Table 1 (see the SI for full details).

Figure 3.

Figure 3

(a) Absorption spectra (continuous line) and excitation spectra (dashed line) of Zn–P3Ra (red) and Zn-PM2a (blue); the spectral intensities are normalized to 1.0 at the Q-band, and the excitation spectra are recorded for emission at 639 nm (porphyrin Q-band). Solvent: CH2Cl2. (b) Jablonski diagram showing the energy-transfer processes.

Table 1. Energy-Transfer Efficiencies ϕEET.

compd ϕEET(macrocycle → porphyrin) ϕEET(polyyne → porphyrin)
Zn–PM2a 0.67 ± 0.08  
Zn–P3Ra 0.32 ± 0.03 0.16 ± 0.02
Zn–PM2b 0.88 ± 0.11  
Zn–P3Rb 0.22 ± 0.03 0.10 ± 0.03
Zn–PM4b 0.68 ± 0.06  
Zn–P5Rb 0.25 ± 0.02 0.09 ± 0.02

The comparison of macrocycle → porphyrin EET efficiencies in the presence and absence of polyyne show that the polyyne acts as a sink for singlet excited state energy from the phenanthroline macrocycle, even though it does not quench the porphyrin.18 The excited-state energy of the macrocycle is split between the porphyrin and the polyyne. The higher efficiency of polyyne → porphyrin EET in [3]rotaxane Zn–P3Ra, compared with Zn–P3Rb and Zn–P5Rb, reflects the shorter polyyne–porphyrin distance. The polyyne → porphyrin EET must be very rapid to compete with intersystem crossing (τ ≈ 0.5 ns).18 Furthermore, the S1 of the polyyne is a dark state with negligible oscillator strength; therefore, Förster-type energy transfer is expected to be very inefficient, implying that the observed EET occurs via a Dexter mechanism.

In conclusion, we have prepared a series of porphyrin–polyyne [3]- and [5]rotaxanes that comprise multiple chromophores in a unique interlocked architecture. An analysis of the absorption, fluorescence, and excitation spectra of the rotaxanes reveals three types of energy-transfer processes (a) from the phenanthroline macrocycle to the porphyrin, (b) from the phenanthroline macrocycle to the polyyne, and (c) from the polyyne to the porphyrin. This work paves the way for a template-directed synthesis of polycatenane cyclo[n]carbons.

Acknowledgments

We thank the EPSRC and the European Research Council (Grant No. 320969) for support, the EPSRC UK Mass Spectrometry Facility at Swansea University for mass spectra, and Diamond Light Source for an award of beamtime.

Supporting Information Available

The Supporting Information is available free of charge on the ACS Publications website at DOI: 10.1021/acs.orglett.6b03528.

  • Details of synthetic procedures and characterization data, analysis of absorption, fluorescence and excitation spectra, and crystallographic analysis (PDF)

  • Crystallographic data for P3Ra (CIF)

The authors declare no competing financial interest.

Supplementary Material

ol6b03528_si_001.pdf (5.7MB, pdf)
ol6b03528_si_002.cif (416.7KB, cif)

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

ol6b03528_si_001.pdf (5.7MB, pdf)
ol6b03528_si_002.cif (416.7KB, cif)

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