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. 2017 May;23(5):628–638. doi: 10.1261/rna.060079.116

FIGURE 1.

FIGURE 1.

Specific Mg2+ binding affinities on a GGGGCCCC duplex under different simulation conditions. The affinities were obtained in a flexible and rigid duplex both with explicit K+ ions and without, thus with a uniform positive background (UB+). Plots A and C show the effect of ion competition (K+ versus UB+) for inner and outer sphere Mg2+ binding, respectively. Plots B and D show the effect of flexibility (flex versus rigid) for inner and outer sphere Mg2+ binding, respectively.